HHsearch alignment for GI: 254780620 and conserved domain: cd00092
>cd00092 HTH_CRP helix_turn_helix, cAMP Regulatory protein C-terminus; DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family.
Probab=91.95 E-value=0.29 Score=28.58 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=37.1
Q ss_pred HHHHHHHHCCC------CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEC
Q ss_conf 99999985598------63359999998199789999999999325905731
Q gi|254780620|r 12 RVLMYCAIHND------YPNRISQIAEACCISELFLFKILQPLVKAGIVETV 57 (144)
Q Consensus 12 ~~l~~La~~~~------~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~ 57 (144)
T Consensus 7 ~~Ll~l~~~~g~~~~~~l~ltr~eiA~~lG~t~eTVsR~l~~l~~~G~I~~~ 58 (67)
T cd00092 7 SFLLNLSLRYGAGDLVQLPLTRQEIADYLGLTRETVSRTLKELEEEGLISRR 58 (67)
T ss_pred HHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEC
T ss_conf 9999999975899666617799999999789099999999999989948966