HHsearch alignment for GI: 254780620 and conserved domain: pfam01022

>pfam01022 HTH_5 Bacterial regulatory protein, arsR family. Members of this family contains a DNA binding 'helix-turn-helix' motif. This family includes other proteins which are not included in the Prosite definition.

Probab=95.73  E-value=0.021  Score=35.31  Aligned_cols=43  Identities=23%  Similarity=0.279  Sum_probs=36.9

Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf             9999999855986335999999819978999999999932590573
Q gi|254780620|r   11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVET   56 (144)
Q Consensus        11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S   56 (144)
T Consensus         5 l~Il~~L~~---~~~~v~el~~~l~~sq~~vS~HL~~L~~~GlV~~   47 (47)
T pfam01022         5 LKILYLLSE---GELCVCELAEILGLSQSTVSHHLKKLREAGLVEK   47 (47)
T ss_pred             HHHHHHHHC---CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             999999980---8996999999989588699999999989809689