HHsearch alignment for GI: 254780620 and conserved domain: pfam01325
>pfam01325 Fe_dep_repress Iron dependent repressor, N-terminal DNA binding domain. This family includes the Diphtheria toxin repressor. DNA binding is through a helix-turn-helix motif.
Probab=95.57 E-value=0.034 Score=34.05 Aligned_cols=47 Identities=17% Similarity=0.130 Sum_probs=39.5
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC
Q ss_conf 999999985598633599999981997899999999993259057315
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR 58 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r 58 (144)
T Consensus 8 Lk~Iy~l~~-~~~~v~~~~iA~~L~Vs~~SVt~mlkkL~~~GlV~~e~ 54 (58)
T pfam01325 8 LETIYTLSE-EKGVVKTKDLAERLNVSPSTVSEMLKKLEKDGYVVYEP 54 (58)
T ss_pred HHHHHHHHC-CCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEC
T ss_conf 999999882-69961299999995999252999999999889978532