HHsearch alignment for GI: 254780620 and conserved domain: pfam01726
>pfam01726 LexA_DNA_bind LexA DNA binding domain. This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins. The aligned region contains a variant form of the helix-turn-helix DNA binding motif. This domain is found associated with pfam00717 the auto-proteolytic domain of LexA EC:3.4.21.88.
Probab=95.02 E-value=0.13 Score=30.57 Aligned_cols=58 Identities=24% Similarity=0.272 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC-CHHHHHHHHHHHHHCCCEEECCCC
Q ss_conf 6456899999999998559863359999998199-789999999999325905731565
Q gi|254780620|r 3 LTKRTDYGIRVLMYCAIHNDYPNRISQIAEACCI-SELFLFKILQPLVKAGIVETVRGR 60 (144)
Q Consensus 3 is~~~~yAi~~l~~La~~~~~~~s~~eIA~~~~i-~~~~l~kil~~L~~agli~S~rG~ 60 (144)
T Consensus 4 LT~rQ~~il~~I~~~~~~~G~~Pt~rEI~~~~g~~S~s~v~~~l~~Le~kG~I~r~~~~ 62 (65)
T pfam01726 4 LTERQREVLDFIKASIEETGYPPSRREIAQALGLRSPNAAEEHLKALERKGYIERDPGK 62 (65)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCCC
T ss_conf 37999999999999999828898799999993899809999999999998396348999