HHsearch alignment for GI: 254780620 and conserved domain: pfam01978
>pfam01978 TrmB Sugar-specific transcriptional regulator TrmB. One member of this family, TrmB, has been shown to be a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter in Thermococcus litoralis.
Probab=96.79 E-value=0.0038 Score=39.66 Aligned_cols=62 Identities=23% Similarity=0.339 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCHH
Q ss_conf 89999999999855986335999999819978999999999932590573156545400023721
Q gi|254780620|r 7 TDYGIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRPAD 71 (144)
Q Consensus 7 ~~yAi~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~~~ 71 (144)
T Consensus 7 s~~E~~vY~~Ll~--~g~~t~~eia~~~~i~r~~vY~~L~~L~~kGlv~~~~~~p~-~y~a~~Pe 68 (68)
T pfam01978 7 SEYEAKVYLALLK--LGPATADEIAEESGVPRSKVYEVLRSLEKKGLVEREKGRPK-KYRAVDPE 68 (68)
T ss_pred CHHHHHHHHHHHH--CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCC-EEEECCCC
T ss_conf 9999999999998--19988999999959889899999999998898898679744-79815969