HHsearch alignment for GI: 254780620 and conserved domain: pfam05732
>pfam05732 RepL Firmicute plasmid replication protein (RepL). This family consists of Firmicute RepL proteins which are involved in plasmid replication.
Probab=90.19 E-value=0.5 Score=27.16 Aligned_cols=73 Identities=14% Similarity=0.155 Sum_probs=52.2
Q ss_pred HHHHHHHHHC--C-CC-CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECC-------CHHHCCHHHHH
Q ss_conf 9999999855--9-86-335999999819978999999999932590573156545400023-------72126099999
Q gi|254780620|r 11 IRVLMYCAIH--N-DY-PNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCR-------PADQITILDVV 79 (144)
Q Consensus 11 i~~l~~La~~--~-~~-~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak-------~~~~Itl~dI~ 79 (144)
T Consensus 58 ~~Vv~yileN~nsnNtlI~T~R~lae~~gvs~~TV~~tmK~L~e~~fI--kk~t~GvymiNP~i~~kG~~~K~~ylL~~f 135 (165)
T pfam05732 58 TRLVFWLIDNLNSNNTLIMTQREIAEETGISLETVRQTMKALEEGNFL--KKKTSGVYMINPDLLFKGDDTKRLNLLLQF 135 (165)
T ss_pred HHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCE--EEECCCEEEECHHHHHCCCHHHHHHHHHHH
T ss_conf 122566765368886499878999998395299999999999758926--861387699885895068727899999998
Q ss_pred HHHCCC
Q ss_conf 997187
Q gi|254780620|r 80 KATEES 85 (144)
Q Consensus 80 ~aie~~ 85 (144)
T Consensus 136 ~~~eqE 141 (165)
T pfam05732 136 RKFEQE 141 (165)
T ss_pred HHHCCC
T ss_conf 764027