HHsearch alignment for GI: 254780620 and conserved domain: pfam05732

>pfam05732 RepL Firmicute plasmid replication protein (RepL). This family consists of Firmicute RepL proteins which are involved in plasmid replication.
Probab=90.19  E-value=0.5  Score=27.16  Aligned_cols=73  Identities=14%  Similarity=0.155  Sum_probs=52.2

Q ss_pred             HHHHHHHHHC--C-CC-CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECC-------CHHHCCHHHHH
Q ss_conf             9999999855--9-86-335999999819978999999999932590573156545400023-------72126099999
Q gi|254780620|r   11 IRVLMYCAIH--N-DY-PNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCR-------PADQITILDVV   79 (144)
Q Consensus        11 i~~l~~La~~--~-~~-~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak-------~~~~Itl~dI~   79 (144)
T Consensus        58 ~~Vv~yileN~nsnNtlI~T~R~lae~~gvs~~TV~~tmK~L~e~~fI--kk~t~GvymiNP~i~~kG~~~K~~ylL~~f  135 (165)
T pfam05732        58 TRLVFWLIDNLNSNNTLIMTQREIAEETGISLETVRQTMKALEEGNFL--KKKTSGVYMINPDLLFKGDDTKRLNLLLQF  135 (165)
T ss_pred             HHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCCE--EEECCCEEEECHHHHHCCCHHHHHHHHHHH
T ss_conf             122566765368886499878999998395299999999999758926--861387699885895068727899999998


Q ss_pred             HHHCCC
Q ss_conf             997187
Q gi|254780620|r   80 KATEES   85 (144)
Q Consensus        80 ~aie~~   85 (144)
T Consensus       136 ~~~eqE  141 (165)
T pfam05732       136 RKFEQE  141 (165)
T ss_pred             HHHCCC
T ss_conf             764027