HHsearch alignment for GI: 254780620 and conserved domain: pfam07848
>pfam07848 PaaX PaaX-like protein. This family contains proteins that are similar to the product of the paaX gene of Escherichia coli. This protein is involved in the regulation of expression of a group of proteins known to participate in the metabolism of phenylacetic acid. In fact, some members of this family are annotated by InterPro as containing a winged helix DNA-binding domain (Interpro:IPR009058).
Probab=90.11 E-value=0.51 Score=27.12 Aligned_cols=49 Identities=31% Similarity=0.306 Sum_probs=40.9
Q ss_pred CCCCCCC---HHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC-CCCCCCEECC
Q ss_conf 5986335---99999981997899999999993259057315-6545400023
Q gi|254780620|r 20 HNDYPNR---ISQIAEACCISELFLFKILQPLVKAGIVETVR-GRRGGVRLCR 68 (144)
Q Consensus 20 ~~~~~~s---~~eIA~~~~i~~~~l~kil~~L~~agli~S~r-G~~GGy~Lak 68 (144)
T Consensus 16 ~~gg~i~~~sLi~ll~~~Gi~~~avRtAlsRl~~~GwL~~~r~Gr~s~Y~LT~ 68 (70)
T pfam07848 16 PHGGAIWLGSLIRLLAGFGISERLVRTALSRLVKAGWLVRERVGRRSYYRLSD 68 (70)
T ss_pred CCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEECC
T ss_conf 58983748999999998399817899999999764864667518822366489