HHsearch alignment for GI: 254780620 and conserved domain: smart00419
>smart00419 HTH_CRP helix_turn_helix, cAMP Regulatory protein.
Probab=94.93 E-value=0.047 Score=33.21 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=32.6
Q ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC
Q ss_conf 335999999819978999999999932590573156
Q gi|254780620|r 24 PNRISQIAEACCISELFLFKILQPLVKAGIVETVRG 59 (144)
Q Consensus 24 ~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG 59 (144)
T Consensus 8 ~lt~~~iA~~lG~tretvsR~l~~l~~~GlI~~~~~ 43 (48)
T smart00419 8 PLTRQEIAELLGLTRETVSRTLKRLEKEGLISREGG 43 (48)
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC
T ss_conf 379999999979979999999999998897997897