HHsearch results for GI: 254780620 and protein with PDBid: 1ldj_A
>1ldj_A Cullin homolog 1, CUL-1; cullin, ROC1, HRT1, zinc ring finger, ligase, ubiquitin, ubiquitination, SCF; 3.00A {Homo sapiens} SCOP: a.4.5.34 a.118.17.1 e.40.1.1 PDB: 1u6g_A 1ldk_A 1ldk_B
Probab=90.88 E-value=0.72 Score=24.92 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=41.3
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCC
Q ss_conf 999999985598633599999981997899999999993259057315654
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRR 61 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~ 61 (144)
+.+.+.|..+.....|.++|++..++|...+.+.|..|.+.+++.-..+..
T Consensus 590 ~q~~iLllfn~~~~~t~~ei~~~t~i~~~~l~~~L~~L~~~k~l~~~~~~~ 640 (760)
T 1ldj_A 590 FQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENA 640 (760)
T ss_dssp HHHHHHHGGGSSSEEEHHHHHHHTCCCHHHHHHHHHHHHHTTTEECSCTTC
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCC
T ss_conf 999999984778888899999877909999999999997579678338988