HHsearch results for GI: 254780620 and protein with PDBid: 1ldj_A

>1ldj_A Cullin homolog 1, CUL-1; cullin, ROC1, HRT1, zinc ring finger, ligase, ubiquitin, ubiquitination, SCF; 3.00A {Homo sapiens} SCOP: a.4.5.34 a.118.17.1 e.40.1.1 PDB: 1u6g_A 1ldk_A 1ldk_B
Probab=90.88  E-value=0.72  Score=24.92  Aligned_cols=51  Identities=14%  Similarity=0.199  Sum_probs=41.3

Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCC
Q ss_conf             999999985598633599999981997899999999993259057315654
Q gi|254780620|r   11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRR   61 (144)
Q Consensus        11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~   61 (144)
                      +.+.+.|..+.....|.++|++..++|...+.+.|..|.+.+++.-..+..
T Consensus       590 ~q~~iLllfn~~~~~t~~ei~~~t~i~~~~l~~~L~~L~~~k~l~~~~~~~  640 (760)
T 1ldj_A          590 FQMAILLQYNTEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLVLEDENA  640 (760)
T ss_dssp             HHHHHHHGGGSSSEEEHHHHHHHTCCCHHHHHHHHHHHHHTTTEECSCTTC
T ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCC
T ss_conf             999999984778888899999877909999999999997579678338988