HHsearch results for GI: 254780620 and protein with PDBid: 1mkm_A

>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2

Probab=97.31  E-value=0.00069  Score=42.74  Aligned_cols=61  Identities=16%  Similarity=0.084  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCH
Q ss_conf             8999999999985598633599999981997899999999993259057315654540002372
Q gi|254780620|r    7 TDYGIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRPA   70 (144)
Q Consensus         7 ~~yAi~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~~   70 (144)
                      .+=|+.+|-+++..+ ++.+..|||+..++|++-+.++++.|...|||.-  .++|.|+|.-..
T Consensus         7 l~Ral~IL~~~a~~~-~~~tl~eia~~lglpksT~~Rll~tL~~~G~l~~--~~~~~Y~lG~~~   67 (249)
T 1mkm_A            7 LKKAFEILDFIVKNP-GDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLR--KKDKRYVPGYKL   67 (249)
T ss_dssp             HHHHHHHHHHHHHCS-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEE--CTTSCEEECTHH
T ss_pred             HHHHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE--CCCCCHHHHHHH
T ss_conf             999999999997389-9989999999879199999999999997798653--255320132465