HHsearch results for GI: 254780620 and protein with PDBid: 1sfx_A

>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH motif, PSI, protein structure initiative; 1.55A {Archaeoglobus fulgidus dsm 4304} SCOP: a.4.5.50

Probab=97.15  E-value=0.00095  Score=41.93  Aligned_cols=75  Identities=19%  Similarity=0.190  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCC---EECCCHHHCCHHHHHHHHC
Q ss_conf             8999999999985598633599999981997899999999993259057315654540---0023721260999999971
Q gi|254780620|r    7 TDYGIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGV---RLCRPADQITILDVVKATE   83 (144)
Q Consensus         7 ~~yAi~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy---~Lak~~~~Itl~dI~~aie   83 (144)
                      +.+-..++..|..+  +++++.+||+..+++++.+.+++..|.+.|+|...+...|++   ..+.+|+++ +.++...++
T Consensus        19 t~~e~~v~~~L~~~--~~~t~~eia~~~~~~~~~v~~~l~~L~~~Glv~r~~~~~~~~~~~~~~~~~~e~-l~~i~~~i~   95 (109)
T 1sfx_A           19 KPSDVRIYSLLLER--GGMRVSEIARELDLSARFVRDRLKVLLKRGFVRREIVEKGWVGYIYSAEKPEKV-LKEFKSSIL   95 (109)
T ss_dssp             CHHHHHHHHHHHHH--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEESSSEEEEEEECCHHHH-HHHHHHHHH
T ss_pred             CHHHHHHHHHHHCC--CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHH-HHHHHHHHH
T ss_conf             99999999999804--888799999997567018999999999599979874257886554336680016-899999999


Q ss_pred             C
Q ss_conf             8
Q gi|254780620|r   84 E   84 (144)
Q Consensus        84 ~   84 (144)
                      .
T Consensus        96 ~   96 (109)
T 1sfx_A           96 G   96 (109)
T ss_dssp             H
T ss_pred             H
T ss_conf             9