HHsearch results for GI: 254780620 and protein with PDBid: 1v4r_A

>1v4r_A Transcriptional repressor; helix-turn-helix, winged-helix, gene regulation; NMR {Streptomyces} SCOP: a.4.5.6

Probab=95.05  E-value=0.01  Score=35.82  Aligned_cols=62  Identities=18%  Similarity=0.132  Sum_probs=49.8

Q ss_pred             CCCCCC-CHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCHHHCCHHHHHHHHC
Q ss_conf             598633-5999999819978999999999932590573156545400023721260999999971
Q gi|254780620|r   20 HNDYPN-RISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRPADQITILDVVKATE   83 (144)
Q Consensus        20 ~~~~~~-s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~~~~Itl~dI~~aie   83 (144)
                      .++... |..+||+..++|+.-+++.++.|...|+|.+.+|+  |+..+.+|...+-.|-++-+.
T Consensus        30 ~pG~~LPser~La~~~~vSr~tvr~Al~~L~~~Gli~~~~g~--G~~V~~~~~~~~~~~~~~~~~   92 (102)
T 1v4r_A           30 APGDTLPSVADIRAQFGVAAKTVSRALAVLKSEGLVSSRGAL--GTVVEKNPIVITGADRLKRME   92 (102)
T ss_dssp             CTTSBCCCHHHHHHHSSSCTTHHHHHTTTTTTSSCCEEETTT--EEESCSCCCCCSSHHHHHCTT
T ss_pred             CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCC--EEEECCCCCCCCHHHHHHHHH
T ss_conf             993998379999999798779999999999988948997586--799877985313289999999