HHsearch results for GI: 254780620 and protein with PDBid: 1xd7_A
>1xd7_A YWNA; structural genomics, protein structure initiative, winged helix DNA binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=100.00 E-value=2.5e-33 Score=216.53 Aligned_cols=130 Identities=17% Similarity=0.248 Sum_probs=118.0
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCHHHCCHHHHHHHH
Q ss_conf 64568999999999985598633599999981997899999999993259057315654540002372126099999997
Q gi|254780620|r 3 LTKRTDYGIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRPADQITILDVVKAT 82 (144)
Q Consensus 3 is~~~~yAi~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~~~~Itl~dI~~ai 82 (144)
+|++++||+|+|+|||.+ +++|+++||+++++|++||+|||++|+++|||+|++|+ |||+|+++|++|||+||++++
T Consensus 4 is~r~~~Av~~L~~La~~--~~~ss~~IAe~~~i~~~~l~kIl~~L~kaGlV~S~~g~-GG~~Lar~p~~Itl~dI~~av 80 (145)
T 1xd7_A 4 INSRLAVAIHILSLISMD--EKTSSEIIADSVNTNPVVVRRMISLLKKADILTSRAGV-PGASLKKDPADISLLEVYRAV 80 (145)
T ss_dssp --CHHHHHHHHHHHHHTC--SCCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEECCSSS-SSCEESSCGGGCBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC--CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCC-CCCCCCCCHHHCCHHHHHHHH
T ss_conf 227999999999998649--99899999988891999999999999878907820899-983011898986799999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHCCHHHHHHCHH
Q ss_conf 187631114688778887656--64479999999999999984179999991589
Q gi|254780620|r 83 EESFFVAECFASHKIDCPLVG--SCGLTSVLRKALNAFFDVLTQYSIECLVRNRS 135 (144)
Q Consensus 83 e~~~~~~~C~~~~~~~C~~~~--~c~~~~~~~~~~~~~~~~L~~~TL~dl~~~~~ 135 (144)
|++..++.|..+....|+... .|.++.+|.++++++.++|+++||+||+++..
T Consensus 81 e~~~~~~~c~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~L~~~TL~dLi~~i~ 135 (145)
T 1xd7_A 81 QKQEELFAVHENPNPKCPVGKKIQNALDETFESVQRAMENELASKSLKDVMNHLF 135 (145)
T ss_dssp CC-----------CCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHCC---
T ss_pred CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 3885323302667888875642158999999999999999984698999998898