HHsearch results for GI: 254780620 and protein with PDBid: 2cyy_A

>2cyy_A Putative HTH-type transcriptional regulator PH1519; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2

Probab=90.56  E-value=0.47  Score=26.04  Aligned_cols=78  Identities=12%  Similarity=0.166  Sum_probs=51.7

Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC----CCCCCE------ECCCHHHCCHHHHHH
Q ss_conf             9999999855986335999999819978999999999932590573156----545400------023721260999999
Q gi|254780620|r   11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRG----RRGGVR------LCRPADQITILDVVK   80 (144)
Q Consensus        11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG----~~GGy~------Lak~~~~Itl~dI~~   80 (144)
                      .++|-.|..  +...|..+||+..|+|++-+.+=+++|.+.|+|.....    ..-||.      +..+++  ...++.+
T Consensus        10 ~~IL~~L~~--d~R~s~~~iA~~lglS~~tv~~Ri~rL~~~GiI~~~~~~vd~~~lg~~~~~~v~~~~~~~--~~~~~~~   85 (151)
T 2cyy_A           10 KKIIKILQN--DGKAPLREISKITGLAESTIHERIRKLRESGVIKKFTAIIDPEALGYSMLAFILVKVKAG--KYSEVAS   85 (151)
T ss_dssp             HHHHHHHHH--CTTCCHHHHHHHHCSCHHHHHHHHHHHHHHTSSCCCCCCCCGGGGTCCEEEEEEEEECTT--CHHHHHH
T ss_pred             HHHHHHHHH--CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCCEEEEEEEECCC--CHHHHHH
T ss_conf             999999998--489999999999891999999999999845982003799889997898569999996354--0589999


Q ss_pred             HHCCCCCCCCCC
Q ss_conf             971876311146
Q gi|254780620|r   81 ATEESFFVAECF   92 (144)
Q Consensus        81 aie~~~~~~~C~   92 (144)
                      .+..-..+..|.
T Consensus        86 ~l~~~p~V~~~~   97 (151)
T 2cyy_A           86 NLAKYPEIVEVY   97 (151)
T ss_dssp             HHHTCTTEEEEE
T ss_pred             HHHCCCCEEEEE
T ss_conf             997699930999