HHsearch results for GI: 254780620 and protein with PDBid: 2dk5_A

>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=90.66  E-value=0.4  Score=26.45  Aligned_cols=48  Identities=13%  Similarity=0.086  Sum_probs=39.2

Q ss_pred             CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCC----CEECC
Q ss_conf             9863359999998199789999999999325905731565454----00023
Q gi|254780620|r   21 NDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGG----VRLCR   68 (144)
Q Consensus        21 ~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GG----y~Lak   68 (144)
                      +++-+..++|....+++.+.+.|+|..|...++|++++..+..    |.|..
T Consensus        33 G~~GIW~kdIk~ktnl~~~~v~K~LK~LEsk~lIK~VksV~~~~rK~YmL~~   84 (91)
T 2dk5_A           33 GNKGIWSRDVRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYN   84 (91)
T ss_dssp             CTTCEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEECCSSCSSCCEEEESS
T ss_pred             CCCCEEHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEC
T ss_conf             7676339999988299889999999999746980654034689807999724