HHsearch results for GI: 254780620 and protein with PDBid: 2dk5_A
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=90.66 E-value=0.4 Score=26.45 Aligned_cols=48 Identities=13% Similarity=0.086 Sum_probs=39.2
Q ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCC----CEECC
Q ss_conf 9863359999998199789999999999325905731565454----00023
Q gi|254780620|r 21 NDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGG----VRLCR 68 (144)
Q Consensus 21 ~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GG----y~Lak 68 (144)
+++-+..++|....+++.+.+.|+|..|...++|++++..+.. |.|..
T Consensus 33 G~~GIW~kdIk~ktnl~~~~v~K~LK~LEsk~lIK~VksV~~~~rK~YmL~~ 84 (91)
T 2dk5_A 33 GNKGIWSRDVRYKSNLPLTEINKILKNLESKKLIKAVKSVAASKKKVYMLYN 84 (91)
T ss_dssp CTTCEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEECCSSCSSCCEEEESS
T ss_pred CCCCEEHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEC
T ss_conf 7676339999988299889999999999746980654034689807999724