HHsearch results for GI: 254780620 and protein with PDBid: 2z9m_A
>2z9m_A Response regulator YYCF; two-component system, YYCG, helix-turn- helix motif, DNA-binding domain, phosphorylation, transcription; 1.87A {Staphylococcus aureus} PDB: 2zxj_A 2d1v_A
Probab=94.37 E-value=0.1 Score=29.95 Aligned_cols=62 Identities=13% Similarity=0.040 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHC-----CCHHHHHHHHHHHH----HC----CCEEECCCCCCCCEECCCHH
Q ss_conf 9999999999855986335999999819-----97899999999993----25----90573156545400023721
Q gi|254780620|r 8 DYGIRVLMYCAIHNDYPNRISQIAEACC-----ISELFLFKILQPLV----KA----GIVETVRGRRGGVRLCRPAD 71 (144)
Q Consensus 8 ~yAi~~l~~La~~~~~~~s~~eIA~~~~-----i~~~~l~kil~~L~----~a----gli~S~rG~~GGy~Lak~~~ 71 (144)
.....+|.+|+.+++..+|-++|.+..- .+...+...+..|+ .. .+|.++||. ||+|.++.-
T Consensus 39 ~~E~~lL~~L~~~~g~vvsr~~L~~~vW~~~~~~~~~~l~~~I~rLRkkL~~~~~~~~~I~Tvrg~--GY~L~~~~~ 113 (120)
T 2z9m_A 39 HREFELFHYLSKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTIRRLREKIEDDPSHPEYIVTRRGV--GYFLQQHEL 113 (120)
T ss_dssp HHHHHHHHHHHTTTTCCEEHHHHHHHHHCTTCCSCTHHHHHHHHHHHHHHCSSTTSCSSEEEETTT--EEEECCC--
T ss_pred HHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCE--EEEEECCCC
T ss_conf 999999999997899637568966650377778988770358999999975078999849993897--288746854