HHsearch results for GI: 254780620 and protein with PDBid: 3cuo_A
>3cuo_A Uncharacterized HTH-type transcriptional regulator YGAV; DNA-binding transcriptional regulator, structural genomics, PSI, MCSG; 2.00A {Escherichia coli K12}
Probab=97.02 E-value=0.0022 Score=39.74 Aligned_cols=67 Identities=9% Similarity=0.114 Sum_probs=49.9
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC-CCCCCCEECCCHHHCCHHHHHHHHC
Q ss_conf 999999985598633599999981997899999999993259057315-6545400023721260999999971
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR-GRRGGVRLCRPADQITILDVVKATE 83 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r-G~~GGy~Lak~~~~Itl~dI~~aie 83 (144)
++++..|+. ++..++.+|++..+++++-+++-|+.|+++|+|++.| |+.==|+++.+ .+.+++..+.
T Consensus 27 l~Il~~L~~--~~~~~v~eLa~~l~~s~stvS~HL~~L~~aglV~~~r~G~~~~Y~l~~~----~i~~l~~~L~ 94 (99)
T 3cuo_A 27 LLILCMLSG--SPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNE----AVNAIIATLK 94 (99)
T ss_dssp HHHHHHHTT--CCSEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSCEEEEECCH----HHHHHHHHHH
T ss_pred HHHHHHHHC--CCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECHH----HHHHHHHHHH
T ss_conf 999999858--9990799977455859879999999999889416998889999998969----9999999998