HHsearch results for GI: 254780620 and protein with PDBid: 3k0l_A
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=95.28 E-value=0.063 Score=31.17 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=64.6
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCC--CEECCCHHHCCHHHHHH-HHCC-CC
Q ss_conf 99999998559863359999998199789999999999325905731565454--00023721260999999-9718-76
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGG--VRLCRPADQITILDVVK-ATEE-SF 86 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GG--y~Lak~~~~Itl~dI~~-aie~-~~ 86 (144)
..+|.+|+.++ .+|..+||+..+++++.+.+++..|.+.|||.-.+.+.-+ ..|.-.++-..+.+-+. .+.. ..
T Consensus 49 ~~vL~~l~~~~--~~t~~~La~~l~~~~~~vs~~l~~L~~~gli~r~~~~~D~R~~~l~LT~~G~~~~~~~~~~~~~~~~ 126 (162)
T 3k0l_A 49 FTALSVLAAKP--NLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKLNQCNQVVQQLEA 126 (162)
T ss_dssp HHHHHHHHHCT--TCCHHHHHHHHTSCGGGHHHHHHHHHHTTSEEEEECCSSSCCEEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999779--9899999999896886999999999988997985279998756878898899999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 311146887788876566447999999999999998417999
Q gi|254780620|r 87 FVAECFASHKIDCPLVGSCGLTSVLRKALNAFFDVLTQYSIE 128 (144)
Q Consensus 87 ~~~~C~~~~~~~C~~~~~c~~~~~~~~~~~~~~~~L~~~TL~ 128 (144)
.++.+++++ -...+..+.+.+.+.|+..+-.
T Consensus 127 ~~~~~l~~~-----------e~~~l~~~L~~~~~~l~~~~~~ 157 (162)
T 3k0l_A 127 QMLQGVDIN-----------LAFLIRNNLELMVKNLSTFSSL 157 (162)
T ss_dssp HHTTTSCHH-----------HHHHHHHHHHHHHHHTCC----
T ss_pred HHHHCCCHH-----------HHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999589999-----------9999999999999999864313