HHsearch results for GI: 254780620 and protein with PDBid: 3nqo_A

>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=96.69  E-value=0.0084  Score=36.35  Aligned_cols=70  Identities=10%  Similarity=0.099  Sum_probs=52.5

Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCC--CEECCCHHHCCHHHHHH
Q ss_conf             99999998559863359999998199789999999999325905731565454--00023721260999999
Q gi|254780620|r   11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGG--VRLCRPADQITILDVVK   80 (144)
Q Consensus        11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GG--y~Lak~~~~Itl~dI~~   80 (144)
                      ..+|.+|..++++++|..+||+..+++++.+.+++..|.+.|||.-.+.+.-+  +.+.-.++-..+.+-+.
T Consensus        44 ~~vL~~l~~~~~~~~t~~eLa~~l~i~~stvs~~v~~Le~~glI~r~~~~~D~R~~~l~LT~kG~~~~~~~~  115 (189)
T 3nqo_A           44 YMTILSILHLPEEETTLNNIARKMGTSKQNINRLVANLEKNGYVDVIPSPHDKRAINVKVTDLGKKVMVTCS  115 (189)
T ss_dssp             HHHHHHHHHSCGGGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECHHHHHHHHHHH
T ss_conf             999999984789990999999998968869999999999879863743267654013467888999999999