HHsearch results for GI: 254780620 and protein with PDBid: 3oop_A
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=94.80 E-value=0.12 Score=29.58 Aligned_cols=64 Identities=13% Similarity=-0.002 Sum_probs=47.3
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCC--CEECCCHHHCCHH
Q ss_conf 99999998559863359999998199789999999999325905731565454--0002372126099
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGG--VRLCRPADQITIL 76 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GG--y~Lak~~~~Itl~ 76 (144)
.++|.+|..++ +++..+||+..+++++.+.+++..|.+.|+|.-.+.+.-+ ..+.-.|+-..+.
T Consensus 40 ~~iL~~l~~~~--~~t~~~La~~l~i~~~~vs~~i~~L~~~g~v~r~~~~~D~R~~~l~LT~~G~~~~ 105 (143)
T 3oop_A 40 WSVLEGIEANE--PISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKET 105 (143)
T ss_dssp HHHHHHHHHHS--SEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHH
T ss_pred HHHHHHHHHCC--CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHH
T ss_conf 99999998689--9799999999896997999999999756774341058998944768898999999