HHsearch alignment for GI: 254780621 and conserved domain: cd06469
>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1. The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.
Probab=96.06 E-value=0.042 Score=33.32 Aligned_cols=68 Identities=24% Similarity=0.380 Sum_probs=52.1
Q ss_pred EEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE--EEEEEECCE
Q ss_conf 994899399999701177021499996217999973033235566213455302304688973866158--103852885
Q gi|254780621|r 40 ERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV--MSASLENGL 117 (157)
Q Consensus 40 ~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~--~~A~~~nGi 117 (157)
T Consensus 2 ~Qt-~~~V~Itv~lkgv~~~~~dv~~se~~lkvn~p-------------------py~feldL~~~Id~~~S~~ki~~t~ 61 (78)
T cd06469 2 SQT-DEDVKISVPLKGVKTSKVDIFCSDLYLKVNFP-------------------PYLFELDLAAPIDDEKSSAKIGNGV 61 (78)
T ss_pred EEC-CCEEEEEEEECCCCCCCCCEEEEEEEEEECCC-------------------CEEEEEECCCCCCCHHCEEEEECCE
T ss_conf 372-77999999957863676768976038997489-------------------9567777207466102579994888
Q ss_pred EEEEEECCCC
Q ss_conf 9999740686
Q gi|254780621|r 118 LYLELLRSVP 127 (157)
Q Consensus 118 LtI~lpK~~p 127 (157)
T Consensus 62 v~i~L~K~e~ 71 (78)
T cd06469 62 LVFTLVKKEP 71 (78)
T ss_pred EEEEEECCCC
T ss_conf 9999983787