HHsearch alignment for GI: 254780621 and conserved domain: cd06471
>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me
Probab=99.87 E-value=2.6e-21 Score=152.14 Aligned_cols=87 Identities=25% Similarity=0.477 Sum_probs=76.7
Q ss_pred CEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCC---CCCCCCEEEEEEECCEEEEEEECCCCC--EEEE
Q ss_conf 43689948993999997011770214999962179999730332---355662134553023046889738661--5810
Q gi|254780621|r 36 PYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSE---EKETVEYLHRGIAKRAFERRFQLADFV--EVMS 110 (157)
Q Consensus 36 ~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~---~~~~~~~~~~e~~~~~F~R~f~Lp~~v--e~~~ 110 (157)
T Consensus 2 rvDV~E~-~~~~~i~~~lPG~~k~dI~V~~~~~~L~I~g~~~~~~~~~~~~~~~~~~E~~~g~f~R~~~lp-~vd~~~i~ 79 (93)
T cd06471 2 KTDIKET-DDEYIVEADLPGFKKEDIKLDYKDGYLTISAKRDESKDEKDKKGNYIRRERYYGSFSRSFYLP-NVDEEEIK 79 (93)
T ss_pred CEEEEEC-CCEEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCEECCCCCCEEEEEECCCEEEEEEECC-CCCCEEEE
T ss_conf 6489988-996999999899987885999989899999996432210266772899997343699999999-98722469
Q ss_pred EEEECCEEEEEEEC
Q ss_conf 38528859999740
Q gi|254780621|r 111 ASLENGLLYLELLR 124 (157)
Q Consensus 111 A~~~nGiLtI~lpK 124 (157)
T Consensus 80 A~~~nGvL~I~lPK 93 (93)
T cd06471 80 AKYENGVLKITLPK 93 (93)
T ss_pred EEEECCEEEEEECC
T ss_conf 99989999999759