HHsearch alignment for GI: 254780621 and conserved domain: cd06475
>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat
Probab=99.52 E-value=5.6e-14 Score=106.77 Aligned_cols=79 Identities=23% Similarity=0.561 Sum_probs=65.7
Q ss_pred EEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEE--EEEE-E
Q ss_conf 689948993999997011770214999962179999730332355662134553023046889738661581--0385-2
Q gi|254780621|r 38 DIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVM--SASL-E 114 (157)
Q Consensus 38 dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~--~A~~-~ 114 (157)
T Consensus 4 ei~~-~~~~F~v~lDV~~F~PeEi~Vk~~d~~l~V~gkheek~de~------G~v~r~F~R~~~LP~~vd~~~v~s~Ls~ 76 (86)
T cd06475 4 EIRQ-TADRWKVSLDVNHFAPEELVVKTKDGVVEITGKHEEKQDEH------GFVSRCFTRKYTLPPGVDPTAVTSSLSP 76 (86)
T ss_pred EEEE-CCCEEEEEEECCCCCCCCCEEEECCCEEEEEEEEEEECCCC------CEEEEEEEEEECCCCCCCHHHEEEEECC
T ss_conf 2998-89889999998897652019999099999998770063899------7799999995339899897786997489
Q ss_pred CCEEEEEEE
Q ss_conf 885999974
Q gi|254780621|r 115 NGLLYLELL 123 (157)
Q Consensus 115 nGiLtI~lp 123 (157)
T Consensus 77 dG~L~I~AP 85 (86)
T cd06475 77 DGILTVEAP 85 (86)
T ss_pred CCEEEEEEC
T ss_conf 988999854