HHsearch alignment for GI: 254780621 and conserved domain: cd06480
>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21.6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.
Probab=99.40 E-value=1.4e-12 Score=98.12 Aligned_cols=77 Identities=29% Similarity=0.583 Sum_probs=65.7
Q ss_pred ECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEE--EEE-ECCEE
Q ss_conf 489939999970117702149999621799997303323556621345530230468897386615810--385-28859
Q gi|254780621|r 42 TGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVMS--ASL-ENGLL 118 (157)
Q Consensus 42 ~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~~--A~~-~nGiL 118 (157)
T Consensus 12 n~~d~F~V~LDV~~F~PEEi~Vk~~d~~l~V~gkHeek~de~------g~vsR~F~Rky~LP~~vd~~~v~S~LS~dGvL 85 (91)
T cd06480 12 NSSEPWKVCVNVHSFKPEELTVKTKDGFVEVSGKHEEQQKEG------GIVSKNFTKKIQLPPEVDPVTVFASLSPEGLL 85 (91)
T ss_pred CCCCCEEEEEECCCCCCCEEEEEEECCEEEEEEEECCCCCCC------CEEEEEEEEEECCCCCCCHHHEEEECCCCCEE
T ss_conf 589788999987677763069999799999998865481799------97999999967089997975829963899639
Q ss_pred EEEEEC
Q ss_conf 999740
Q gi|254780621|r 119 YLELLR 124 (157)
Q Consensus 119 tI~lpK 124 (157)
T Consensus 86 tI~APk 91 (91)
T cd06480 86 IIEAPQ 91 (91)
T ss_pred EEEECC
T ss_conf 997179