HHsearch alignment for GI: 254780621 and conserved domain: cd06498
>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ
Probab=99.53 E-value=5.1e-14 Score=106.98 Aligned_cols=79 Identities=23% Similarity=0.524 Sum_probs=66.7
Q ss_pred EECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEE--EEEEE-CCE
Q ss_conf 948993999997011770214999962179999730332355662134553023046889738661581--03852-885
Q gi|254780621|r 41 RTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVM--SASLE-NGL 117 (157)
Q Consensus 41 ~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~--~A~~~-nGi 117 (157)
T Consensus 3 ~~d~~~F~v~lDv~~F~Peei~Vkv~~~~l~V~gkheek~d~~------G~v~r~F~R~~~LP~~vd~~~v~S~Ls~dG~ 76 (84)
T cd06498 3 RLEKDKFSVNLDVKHFSPEELKVKVLGDFIEIHGKHEERQDEH------GFISREFQRKYRIPADVDPLTITSSLSPDGV 76 (84)
T ss_pred EECCCCEEEEEECCCCCCHHEEEEEECCEEEEEEEECCCCCCC------CEEEEEEEEEECCCCCCCHHHEEEEECCCCE
T ss_conf 0857658999998888520229999799999998663273899------7799999997549999697793998589977
Q ss_pred EEEEEECC
Q ss_conf 99997406
Q gi|254780621|r 118 LYLELLRS 125 (157)
Q Consensus 118 LtI~lpK~ 125 (157)
T Consensus 77 L~I~ApkK 84 (84)
T cd06498 77 LTVCGPRK 84 (84)
T ss_pred EEEEEECC
T ss_conf 99998089