HHsearch alignment for GI: 254780621 and conserved domain: pfam08190

>pfam08190 PIH1 pre-RNA processing PIH1/Nop17. This domain is involved in pre-rRNA processing. It has has been shown to be required either for nucleolar retention or correct assembly of the box C/D snoRNP in Saccharomyces cerevisiae. The C-terminal region of this family has similarity to the CS domain pfam04969.
Probab=96.72  E-value=0.0076  Score=37.88  Aligned_cols=62  Identities=19%  Similarity=0.289  Sum_probs=48.9

Q ss_pred             CCEEEEEECCCCC-HHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE--EEEEE--ECCEEE
Q ss_conf             9399999701177-021499996217999973033235566213455302304688973866158--10385--288599
Q gi|254780621|r   45 NAYRITIAVSGFH-PSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV--MSASL--ENGLLY  119 (157)
Q Consensus        45 ~~y~i~~~lPG~~-kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~--~~A~~--~nGiLt  119 (157)
T Consensus       258 ~~Lvv~I~LP~l~S~~~~~LdV~e~~l~L~~~~~-----------------~Y~Ldl~LPy~Vd~~~~~AkFdkk~~~L~  320 (325)
T pfam08190       258 KELVLEIELPGLKSVAECDLDVSEDRLLLESRKP-----------------KYRLDLPLPYPVDEERGSAKFNKKKKTLT  320 (325)
T ss_pred             CEEEEEEECCCCCCCCCEEEEECCCEEEEEECCC-----------------CCEEEECCCCEECCCCCEEEEECCCCEEE
T ss_conf             3899999888977512307997278899995698-----------------62688137864757875489832687899


Q ss_pred             EEEE
Q ss_conf             9974
Q gi|254780621|r  120 LELL  123 (157)
Q Consensus       120 I~lp  123 (157)
T Consensus       321 VtlP  324 (325)
T pfam08190       321 VTLP  324 (325)
T ss_pred             EEEC
T ss_conf             9803