HHsearch alignment of GI: 254780621 and MMDB domain: 2k8q_A_
>2k8q_A (A:) Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=92.80 E-value=0.49 Score=26.29 Aligned_cols=77 Identities=10% Similarity=0.211 Sum_probs=54.2
Q ss_pred CCCCEEEEEECCCCEEEEEECCCCC--HHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE--
Q ss_conf 8884368994899399999701177--021499996217999973033235566213455302304688973866158--
Q gi|254780621|r 33 AYPPYDIERTGENAYRITIAVSGFH--PSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV-- 108 (157)
Q Consensus 33 ~~P~~dI~~~~e~~y~i~~~lPG~~--kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~-- 108 (157)
.+|.+.|.++ ++...|.+-+|-+. .-++++.+++...+.-. .-|-.+..||..+.-
T Consensus 2 iTP~F~itQd-~~fv~I~I~~p~~r~s~~~~e~~i~~~~F~F~~-------------------~PYyLRL~fp~~i~ed~ 61 (134)
T 2k8q_A 2 ITPRFSITQD-EEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-------------------SPYYLRLRFPHELIDDE 61 (134)
T ss_dssp CCSEEEEEEC-SSEEEEEEECCSSCCCSSSCCCEECSSSEEECS-------------------SSSCEEECCSSCEECCS
T ss_pred CCCEEEEEEC-CCEEEEEEEECCCCCCCCCEEEEECCCEEEEEC-------------------CCCEEEEECCCCEECCC
T ss_conf 7861898758-998999999252012677527997488999962-------------------66068980797252388
Q ss_pred -EEEEE--ECCEEEEEEECCCCHH
Q ss_conf -10385--2885999974068601
Q gi|254780621|r 109 -MSASL--ENGLLYLELLRSVPER 129 (157)
Q Consensus 109 -~~A~~--~nGiLtI~lpK~~pe~ 129 (157)
.+|+| +.|.++|+|||..|-+
T Consensus 62 ~~~a~yd~~~~~~tv~lpKe~~Ge 85 (134)
T 2k8q_A 62 RSTAQYDSKDECINVKVAKLNKNE 85 (134)
T ss_dssp SCEEEEETTTTEEEEEEEESSTTC
T ss_pred CCEEEEECCCCEEEEEEECCCCCC
T ss_conf 733889766878999983776787