HHsearch results for GI: 254780621 and protein with PDBid: 2k8q_A
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=92.14 E-value=0.48 Score=25.39 Aligned_cols=76 Identities=11% Similarity=0.212 Sum_probs=52.2
Q ss_pred CCCCEEEEEECCCCEEEEEECCCCC--HHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE--
Q ss_conf 8884368994899399999701177--021499996217999973033235566213455302304688973866158--
Q gi|254780621|r 33 AYPPYDIERTGENAYRITIAVSGFH--PSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV-- 108 (157)
Q Consensus 33 ~~P~~dI~~~~e~~y~i~~~lPG~~--kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~-- 108 (157)
.+|.+.|.++ ++...|.+-+|-+. ..++++.+++...+.-. .-|-.+..||..+.-
T Consensus 2 iTP~F~isQd-~~~v~i~I~~p~~r~s~~~~e~~i~~~~F~F~~-------------------~PYyLRL~fp~~l~ed~ 61 (134)
T 2k8q_A 2 ITPRFSITQD-EEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-------------------SPYYLRLRFPHELIDDE 61 (134)
T ss_dssp CCSEEEEEEC-SSEEEEEEECCSSCCCSSSCCCEECSSSEEECS-------------------SSSCEEECCSSCEECCS
T ss_pred CCCEEEEEEC-CCEEEEEEEECCCCCCCCCEEEEECCCEEEEEC-------------------CCCEEEEECCCCEECCC
T ss_conf 7862898768-998999999262013667527997488999962-------------------66068970797255088
Q ss_pred -EEEEE--ECCEEEEEEECCCCH
Q ss_conf -10385--288599997406860
Q gi|254780621|r 109 -MSASL--ENGLLYLELLRSVPE 128 (157)
Q Consensus 109 -~~A~~--~nGiLtI~lpK~~pe 128 (157)
.+|+| +.|.++|++||..|-
T Consensus 62 ~~~asYd~~~g~~ti~lpK~~~G 84 (134)
T 2k8q_A 62 RSTAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp SCEEEEETTTTEEEEEEEESSTT
T ss_pred CCEEEEECCCCEEEEEEECCCCC
T ss_conf 73378866676899998277678