HHsearch results for GI: 254780621 and protein with PDBid: 3eud_A
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=95.39 E-value=0.14 Score=28.63 Aligned_cols=79 Identities=10% Similarity=0.200 Sum_probs=56.6
Q ss_pred CCCCCCEEEEEECCCCEEEEEECCCCC--HHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE
Q ss_conf 788884368994899399999701177--021499996217999973033235566213455302304688973866158
Q gi|254780621|r 31 TSAYPPYDIERTGENAYRITIAVSGFH--PSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV 108 (157)
Q Consensus 31 ~~~~P~~dI~~~~e~~y~i~~~lPG~~--kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~ 108 (157)
.-.+|.+.|.++ ++...|.+-+|-+. ..++++.+++...+.-. .-|-.+..||..+..
T Consensus 14 ~MiTP~F~isQD-d~~V~I~I~~p~~r~s~~~~ei~id~~~F~F~~-------------------~PYyLRL~fP~~lve 73 (115)
T 3eud_A 14 KMITPRFSITQD-EEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-------------------SPYYLRLRFPHELID 73 (115)
T ss_dssp CCBCCCEEEEEC-SSEEEEEEECCSCCCCSSSCEEEEETTEEEEEE-------------------TTEEEEEECSSCEEC
T ss_pred CEECCEEEEEEC-CCEEEEEEEECCCCCCCCCEEEEECCCEEEEEC-------------------CCCEEEEECCCCEEC
T ss_conf 778750898868-998999999363002677618997488999963-------------------660699817972661
Q ss_pred ---EEEEE--ECCEEEEEEECCCCHH
Q ss_conf ---10385--2885999974068601
Q gi|254780621|r 109 ---MSASL--ENGLLYLELLRSVPER 129 (157)
Q Consensus 109 ---~~A~~--~nGiLtI~lpK~~pe~ 129 (157)
.+|+| +.|.++|++||..|-+
T Consensus 74 d~~~~asYD~~~g~~ti~lpKe~~GE 99 (115)
T 3eud_A 74 DERSTAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp STTCEEEEETTTTEEEEEEEESSTTC
T ss_pred CCCCEEEEECCCCEEEEEEECCCCCC
T ss_conf 88733889776658999980776898