Query gi|254780621|ref|YP_003065034.1| small heat shock protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 157
No_of_seqs 114 out of 2566
Neff 6.6
Searched_HMMs 23785
Date Tue May 31 17:56:55 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780621.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 99.9 3.8E-26 1.6E-30 180.7 12.9 106 32-138 41-150 (151)
2 1shs_A Small heat shock protei 99.9 2.1E-25 8.9E-30 176.1 12.7 104 32-138 40-147 (147)
3 2klr_A Alpha-crystallin B chai 99.9 9.7E-24 4.1E-28 165.8 8.0 99 35-141 64-165 (175)
4 3gla_A Low molecular weight he 99.9 1.4E-21 5.8E-26 152.5 12.4 93 32-125 2-97 (100)
5 3aab_A Putative uncharacterize 99.8 5.4E-21 2.3E-25 148.8 10.8 97 32-135 22-122 (123)
6 3l1e_A Alpha-crystallin A chai 99.8 1.6E-19 6.6E-24 139.7 11.3 97 35-138 3-105 (106)
7 2bol_A TSP36, small heat shock 99.8 5.2E-19 2.2E-23 136.5 9.0 87 38-131 102-194 (314)
8 2wj7_A Alpha-crystallin B chai 99.8 1E-18 4.2E-23 134.8 10.5 90 36-134 2-94 (94)
9 2wj5_A Heat shock protein beta 99.8 2.6E-18 1.1E-22 132.2 9.9 90 38-134 5-97 (101)
10 2bol_A TSP36, small heat shock 99.7 2.5E-16 1.1E-20 119.9 10.0 85 38-125 224-313 (314)
11 3igf_A ALL4481 protein; two-do 98.2 6.6E-06 2.8E-10 55.5 9.0 62 43-123 303-367 (374)
12 2xcm_C SGT1-like protein, cyto 96.6 0.016 6.8E-07 34.5 9.1 78 35-127 3-82 (92)
13 1wh0_A Ubiquitin carboxyl-term 96.4 0.03 1.2E-06 32.9 9.6 90 36-128 21-113 (134)
14 1rl1_A Suppressor of G2 allele 95.7 0.062 2.6E-06 30.9 8.4 79 35-128 10-90 (114)
15 3eud_A Protein SHQ1; CS domain 95.4 0.14 6.1E-06 28.6 9.5 79 31-129 14-99 (115)
16 2k8q_A Protein SHQ1; beta-sand 92.1 0.48 2E-05 25.4 6.9 76 33-128 2-84 (134)
17 2o30_A Nuclear movement protei 91.4 0.72 3E-05 24.3 11.2 73 37-128 7-82 (131)
18 1wfi_A Nuclear distribution ge 84.3 2.1 8.7E-05 21.5 9.4 78 32-127 5-88 (131)
19 1x5m_A Calcyclin-binding prote 79.4 3.1 0.00013 20.3 9.8 79 35-128 21-105 (127)
20 2kmw_A Uncharacterized protein 74.0 4.4 0.00019 19.4 8.6 79 34-128 4-83 (150)
21 1ejf_A Progesterone receptor P 72.9 4.7 0.0002 19.3 11.0 77 36-128 5-83 (125)
22 2rh0_A NUDC domain-containing 72.3 4.9 0.00021 19.2 6.0 73 34-125 13-89 (157)
23 1ew4_A CYAY protein; friedreic 49.5 11 0.00047 17.0 3.0 13 61-73 30-42 (106)
24 2cql_A OK/SW-CL.103, 60S ribos 44.5 12 0.0005 16.8 2.5 18 58-75 20-37 (100)
25 2ks0_A Uncharacterized protein 38.0 17 0.00071 15.8 2.5 25 52-76 14-38 (71)
26 3jyw_H 60S ribosomal protein L 32.9 21 0.0009 15.2 2.3 19 58-76 8-26 (179)
27 1vq8_E 50S ribosomal protein L 31.8 24 0.001 14.9 2.7 17 59-75 37-53 (178)
28 2zkr_e 60S ribosomal protein L 31.7 24 0.001 14.9 2.7 18 58-75 13-30 (192)
29 1rl6_A Protein (ribosomal prot 30.3 25 0.0011 14.7 2.7 16 59-74 38-53 (177)
30 1nkw_E 50S ribosomal protein L 28.8 27 0.0011 14.6 2.4 16 59-74 66-81 (212)
31 2cg9_X CO-chaperone protein SB 27.6 28 0.0012 14.4 3.1 71 44-125 22-96 (134)
32 2j01_H 50S ribosomal protein L 26.6 24 0.001 14.9 1.7 18 58-75 12-29 (180)
33 3bbo_I Ribosomal protein L6; l 23.1 20 0.00083 15.4 0.7 17 58-74 54-70 (223)
34 1dkx_A Substrate binding domai 20.3 39 0.0017 13.6 2.7 26 114-141 92-117 (219)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.94 E-value=3.8e-26 Score=180.71 Aligned_cols=106 Identities=27% Similarity=0.413 Sum_probs=90.2
Q ss_pred CCCCCEEEEEECCCCEEEEEECCCCCHHHEEEEEEC-CEEEEEEEECCC-CCCCCCEEEEEEECCEEEEEEECCCCCEEE
Q ss_conf 888843689948993999997011770214999962-179999730332-355662134553023046889738661581
Q gi|254780621|r 32 SAYPPYDIERTGENAYRITIAVSGFHPSEITIEVDS-SILMVRGEKKSE-EKETVEYLHRGIAKRAFERRFQLADFVEVM 109 (157)
Q Consensus 32 ~~~P~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~-~~LtI~g~~~~~-~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~ 109 (157)
.++|++||+++ +++|+|+++|||++++||+|++++ +.|+|+|+++.+ +.++..|+++|+.+|+|+|+|.||++++..
T Consensus 41 ~~~p~~di~e~-~~~~~i~~~lPG~~~edi~v~v~~~~~l~i~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~LP~~vd~~ 119 (151)
T 1gme_A 41 FANARMDWKET-PEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVE 119 (151)
T ss_dssp HGGGCEEEEEC-SSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGG
T ss_pred CCCCCEEEEEC-CCEEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCEEECC
T ss_conf 67883579987-99799999969997062399997897644102112445124463678777353698999888468113
Q ss_pred --EEEEECCEEEEEEECCCCHHHCCEEEEEC
Q ss_conf --03852885999974068601187288733
Q gi|254780621|r 110 --SASLENGLLYLELLRSVPERMKPRRIEIS 138 (157)
Q Consensus 110 --~A~~~nGiLtI~lpK~~pe~~~~r~I~I~ 138 (157)
+|+|+||||+|+|||..++..++++|+|+
T Consensus 120 ~i~A~~~dGvL~I~lpK~~~~~~~~~~I~I~ 150 (151)
T 1gme_A 120 EVKAGLENGVLTVTVPKAEVKKPEVKAIQIS 150 (151)
T ss_dssp GCEEEEETTEEEEEEECCCCCTTCCCCCCCC
T ss_pred CEEEEEECCEEEEEEECCCCCCCCCEEEECC
T ss_conf 1379987999999997577677886288446
No 2
>1shs_A Small heat shock protein; chaperone, beta-sandwich, structural genomics, PSI, protein structure initiative; 2.90A {Methanocaldococcus jannaschii} SCOP: b.15.1.1
Probab=99.93 E-value=2.1e-25 Score=176.08 Aligned_cols=104 Identities=19% Similarity=0.269 Sum_probs=87.0
Q ss_pred CCCCCEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCC-CCCCCEEEE-EEECCEEEEEEECCCCCEEE
Q ss_conf 8888436899489939999970117702149999621799997303323-556621345-53023046889738661581
Q gi|254780621|r 32 SAYPPYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEE-KETVEYLHR-GIAKRAFERRFQLADFVEVM 109 (157)
Q Consensus 32 ~~~P~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~-~~~~~~~~~-e~~~~~F~R~f~Lp~~ve~~ 109 (157)
.++|++||++++ ++|.|.++|||++++||+|+++++.|+|+|+++... .++..++++ ++++|+|+|+|.||.+++..
T Consensus 40 ~~~p~~di~e~~-~~~~i~~~lPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~~~~~f~r~i~LP~~vd~~ 118 (147)
T 1shs_A 40 KGFMPISIIEGD-QHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEE 118 (147)
T ss_dssp ESCCCEEEEECS-SEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCTTCEEEEECSCCCCEEEEEEECSSCBCGG
T ss_pred CCCCCEEEEECC-CEEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCEECC
T ss_conf 788837899849-9799999989997788899998999999999855454477837999998435579999999882216
Q ss_pred --EEEEECCEEEEEEECCCCHHHCCEEEEEC
Q ss_conf --03852885999974068601187288733
Q gi|254780621|r 110 --SASLENGLLYLELLRSVPERMKPRRIEIS 138 (157)
Q Consensus 110 --~A~~~nGiLtI~lpK~~pe~~~~r~I~I~ 138 (157)
+|+|+||||+|+|||. +..++|+|+|.
T Consensus 119 ~i~A~~~nGiL~I~lpK~--~~~~~k~I~I~ 147 (147)
T 1shs_A 119 NASAKFENGVLSVILPKA--ESSIKKGINIE 147 (147)
T ss_dssp GCEEEEETTEEEEEEEBC--GGGCCEECCCC
T ss_pred CEEEEEECCEEEEEEEEC--CCCCCCEEEEC
T ss_conf 239999899999999836--87888125619
No 3
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens}
Probab=99.89 E-value=9.7e-24 Score=165.81 Aligned_cols=99 Identities=21% Similarity=0.438 Sum_probs=81.0
Q ss_pred CCEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE--EEEE
Q ss_conf 84368994899399999701177021499996217999973033235566213455302304688973866158--1038
Q gi|254780621|r 35 PPYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV--MSAS 112 (157)
Q Consensus 35 P~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~--~~A~ 112 (157)
|++||.++ +++|.|+++||||+++||+|+++++.|+|+|+++....+. ++.++.|.|+|.||++|+. ++|+
T Consensus 64 ~~~dv~e~-~~~~~i~~dlpG~~~edi~v~~~~~~L~I~g~~~~~~~~~------~~~~~~f~r~~~LP~~vd~~~i~A~ 136 (175)
T 2klr_A 64 GLSEMRLE-KDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEH------GFISREFHRKYRIPADVDPLTITSS 136 (175)
T ss_dssp -----CCC-CSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETT------EEEEEEEEEEEECTTTCCTTTCEEE
T ss_pred CCCEEEEC-CCEEEEEEECCCCCHHHCEEEEECCEEEEEECCCCEEECC------CEEEEEEEEEEECCCEEEHHHEEEE
T ss_conf 87547886-9759999988999867838999799999997302100023------1267510101826741623343898
Q ss_pred E-ECCEEEEEEECCCCHHHCCEEEEECCCC
Q ss_conf 5-2885999974068601187288733788
Q gi|254780621|r 113 L-ENGLLYLELLRSVPERMKPRRIEISQSP 141 (157)
Q Consensus 113 ~-~nGiLtI~lpK~~pe~~~~r~I~I~~~~ 141 (157)
| +||||+|++||..+ .++.|+|+|+.+.
T Consensus 137 l~~~GvL~I~~PK~~~-~~~~r~I~I~~~~ 165 (175)
T 2klr_A 137 LSSDGVLTVNGPRKQV-SGPERTIPITREE 165 (175)
T ss_dssp ECTTSCEEEEEECC----------------
T ss_pred ECCCCEEEEEEECCCC-CCCCCEEEEEECC
T ss_conf 6789689999865776-6898376578689
No 4
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV}
Probab=99.87 E-value=1.4e-21 Score=152.48 Aligned_cols=93 Identities=31% Similarity=0.496 Sum_probs=82.2
Q ss_pred CCCCCEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCC-CCCCCEEEEEEECCEEEEEEECCCCCEEE-
Q ss_conf 8888436899489939999970117702149999621799997303323-55662134553023046889738661581-
Q gi|254780621|r 32 SAYPPYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEE-KETVEYLHRGIAKRAFERRFQLADFVEVM- 109 (157)
Q Consensus 32 ~~~P~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~-~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~- 109 (157)
.|.|++||++++ ++|+|.++|||++++||+|+++++.|+|+|++..+. .++..|+++|+.+|+|+|+|.||++++..
T Consensus 2 ~~~P~vdi~e~~-~~~~i~~~lPG~~~~di~i~~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~~~lP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEV-NHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEEECS-SEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CCCCCEEEEECC-CEEEEEEECCCCCCCEEEEEEECCEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCCCEECCC
T ss_conf 878965899979-9899999989994346999998998999999821136688259998785018999999999842363
Q ss_pred -EEEEECCEEEEEEECC
Q ss_conf -0385288599997406
Q gi|254780621|r 110 -SASLENGLLYLELLRS 125 (157)
Q Consensus 110 -~A~~~nGiLtI~lpK~ 125 (157)
+|+|+||+|+|++||.
T Consensus 81 i~A~~~nGvL~I~lPK~ 97 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKR 97 (100)
T ss_dssp CEEEEETTEEEEEEEBC
T ss_pred EEEEEECCEEEEEEECC
T ss_conf 29999899999998226
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii str} PDB: 3aac_A
Probab=99.85 E-value=5.4e-21 Score=148.82 Aligned_cols=97 Identities=20% Similarity=0.300 Sum_probs=78.8
Q ss_pred CCCCCEEEEEECCCCEEEEEECCCCCHHHEEEEEEC-CEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCE---
Q ss_conf 888843689948993999997011770214999962-1799997303323556621345530230468897386615---
Q gi|254780621|r 32 SAYPPYDIERTGENAYRITIAVSGFHPSEITIEVDS-SILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVE--- 107 (157)
Q Consensus 32 ~~~P~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~-~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve--- 107 (157)
.++||+||++++ ++|+|.++|||++++||+|++++ +.|+|+|++..+.. .+.+.++.+|.|+|+|.||.+++
T Consensus 22 ~~~P~vdi~e~~-~~~~l~~~lPGv~kedi~v~~~~~~~l~i~~~~~~~~~---~~~~~~~~~g~f~r~i~LP~~v~~~~ 97 (123)
T 3aab_A 22 LVYPPVDMYEEG-GYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEP---GVKYLTQRPKYVRKVIRLPYNVAKDA 97 (123)
T ss_dssp HHCSCEEEEEET-TEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCC---SCEEEECSCSEEEEEEECSSEECTTC
T ss_pred CCCCCEEEEECC-CEEEEEEECCCCCHHHEEEEEEECCEEEEEEEECCCCC---CEEEEEEECCEEEEEEECCCCCCCCC
T ss_conf 569968899939-97999999999986990999992988999878713589---83999984438999999986524553
Q ss_pred EEEEEEECCEEEEEEECCCCHHHCCEEE
Q ss_conf 8103852885999974068601187288
Q gi|254780621|r 108 VMSASLENGLLYLELLRSVPERMKPRRI 135 (157)
Q Consensus 108 ~~~A~~~nGiLtI~lpK~~pe~~~~r~I 135 (157)
.++|.|+||||+|+|||. +.++ ++|
T Consensus 98 ~i~A~~~nGvL~I~lPk~--e~~~-~ki 122 (123)
T 3aab_A 98 EISGKYENGVLTIRIPIA--GTSV-FKF 122 (123)
T ss_dssp CCEEEEETTEEEEEEEGG--GEEC-SCC
T ss_pred EEEEEECCCEEEEEEECC--CCCC-CCC
T ss_conf 276896499999997468--6766-777
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.81 E-value=1.6e-19 Score=139.75 Aligned_cols=97 Identities=23% Similarity=0.454 Sum_probs=78.8
Q ss_pred CCEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE--EEEE
Q ss_conf 84368994899399999701177021499996217999973033235566213455302304688973866158--1038
Q gi|254780621|r 35 PPYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV--MSAS 112 (157)
Q Consensus 35 P~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~--~~A~ 112 (157)
+..||.++ +++|.|+++||||+++||+|+++++.|+|+|+++....+. ++.+++|.|+|.||.+++. ++|.
T Consensus 3 ~~~di~e~-~~~~~i~~dvpG~~~edi~V~v~~~~l~I~~~~~~~~~~~------~~~~~~f~r~~~lp~~vd~~~i~a~ 75 (106)
T 3l1e_A 3 GISEVRSD-RDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDH------GYISREFHRRYRLPSNVDQSALSCS 75 (106)
T ss_dssp CSEEEEEC-SSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTT------EEEEEEEEEEEECCTTBCTTSCEEE
T ss_pred CCCCEEEC-CCEEEEEEECCCCCHHHEEEEEECCCEEEEEEEEEECCCC------CEEEEEEEEEEECCHHCCHHHEEEE
T ss_conf 86638997-9879999995999879929999899889999971001138------4899868799989433543057998
Q ss_pred E-ECCEEEEEEECCCCH---HHCCEEEEEC
Q ss_conf 5-288599997406860---1187288733
Q gi|254780621|r 113 L-ENGLLYLELLRSVPE---RMKPRRIEIS 138 (157)
Q Consensus 113 ~-~nGiLtI~lpK~~pe---~~~~r~I~I~ 138 (157)
| +||+|+|++||..+. ..++|.|+|+
T Consensus 76 l~~dGvL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 76 LSADGMLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp ECTTSEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred ECCCCEEEEEECCCCCCCCCCCCCEEEEEE
T ss_conf 868978999963776567777897380452
No 7
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.78 E-value=5.2e-19 Score=136.54 Aligned_cols=87 Identities=23% Similarity=0.363 Sum_probs=71.4
Q ss_pred EEEEECC---CCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE--EEEE
Q ss_conf 6899489---9399999701177021499996217999973033235566213455302304688973866158--1038
Q gi|254780621|r 38 DIERTGE---NAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV--MSAS 112 (157)
Q Consensus 38 dI~~~~e---~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~--~~A~ 112 (157)
|+|++++ .+|.|.++||||+++||+|+++++.|+|+|+|+.+.+. ++..|.|.|+|.||++|+. .+|.
T Consensus 102 d~Ye~~edg~~~F~V~~dvpGf~pEDI~V~v~~~~L~I~g~r~~~~~~-------~~~~r~F~R~~~LP~~VD~~~i~A~ 174 (314)
T 2bol_A 102 DAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGD-------AAMSESVGRSIPLPPSVDRNHIQAT 174 (314)
T ss_dssp GCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTC-------CCBCCCEEEEEECCTTBCGGGCEEE
T ss_pred HHHHCCCCCCEEEEEEEECCCCCHHHCEEEEECCEEEEEEEEEEECCC-------CEEEEEEEEEEECCCCCCHHHEEEE
T ss_conf 121226778626999998999976783999999999999999654689-------8899999999989875585586999
Q ss_pred E-ECCEEEEEEECCCCHHHC
Q ss_conf 5-288599997406860118
Q gi|254780621|r 113 L-ENGLLYLELLRSVPERMK 131 (157)
Q Consensus 113 ~-~nGiLtI~lpK~~pe~~~ 131 (157)
| +||||+|++||..|+.+.
T Consensus 175 l~~dGvL~I~~PK~~pe~~~ 194 (314)
T 2bol_A 175 ITTDDVLVIEAPVNEPNYKA 194 (314)
T ss_dssp ECSSSEEEEEEEBSSCCTTT
T ss_pred ECCCCEEEEEECCCCCCCCC
T ss_conf 76896699997888876543
No 8
>2wj7_A Alpha-crystallin B chain; desmin-related myopathy, phosphoprotein, disease mutation, eye lens protein, methylation, polymorphism, glycoprotein; 2.63A {Homo sapiens} PDB: 3l1g_A
Probab=99.78 E-value=1e-18 Score=134.76 Aligned_cols=90 Identities=22% Similarity=0.517 Sum_probs=73.8
Q ss_pred CEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEE--EEEE
Q ss_conf 43689948993999997011770214999962179999730332355662134553023046889738661581--0385
Q gi|254780621|r 36 PYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVM--SASL 113 (157)
Q Consensus 36 ~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~--~A~~ 113 (157)
++||.++ +++|.|.++||||+++||+|+++++.|+|+|+++...... ++.+++|.|+|.||.+++.. +|+|
T Consensus 2 a~di~~~-~d~~~i~~dvpG~~~edi~V~~~~~~l~I~g~~~~~~~~~------~~~~~~f~r~~~lP~~vd~~~i~A~l 74 (94)
T 2wj7_A 2 AMEMRLE-KDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEH------GFISREFHRKYRIPADVDPLTITSSL 74 (94)
T ss_dssp -CCEEEC-SSEEEEEEECTTSCGGGEEEEEETTEEEEEEEECCCBCSS------SEEEEEEEEEEECCTTCCGGGCEEEE
T ss_pred CCEEEEC-CCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEEECCCCC------EEECCCEEEEEECCCCCCHHHEEEEE
T ss_conf 6179987-9879999998999779969999899799999951035310------33426189999996671255679998
Q ss_pred -ECCEEEEEEECCCCHHHCCEE
Q ss_conf -288599997406860118728
Q gi|254780621|r 114 -ENGLLYLELLRSVPERMKPRR 134 (157)
Q Consensus 114 -~nGiLtI~lpK~~pe~~~~r~ 134 (157)
+||+|+|++||. +.++|||
T Consensus 75 ~~dGvL~I~~PK~--~~~~p~r 94 (94)
T 2wj7_A 75 SSDGVLTVNGPRK--QVSGPER 94 (94)
T ss_dssp CTTSEEEEEEECC---------
T ss_pred CCCCEEEEEEECC--CCCCCCC
T ss_conf 7895899998768--8888998
No 9
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.76 E-value=2.6e-18 Score=132.24 Aligned_cols=90 Identities=20% Similarity=0.392 Sum_probs=72.5
Q ss_pred EEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE--EEEEE-E
Q ss_conf 68994899399999701177021499996217999973033235566213455302304688973866158--10385-2
Q gi|254780621|r 38 DIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV--MSASL-E 114 (157)
Q Consensus 38 dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~--~~A~~-~ 114 (157)
+|.+ ++++|.|.++||||+++||+|+++++.|+|+|+++.....+ . +.+|+|.|+|.||++++. ++|.+ +
T Consensus 5 ~v~~-d~~~~~v~~dvpG~~~edI~V~v~~~~L~I~g~~~~~~~~~-~-----~~~r~f~R~f~lP~~vd~~~i~a~l~~ 77 (101)
T 2wj5_A 5 QVPT-DPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEH-G-----FIAREFHRRYRLPPGVDPAAVTSALSP 77 (101)
T ss_dssp CCCC-CSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTT-C-----CEEEEEEEEEECCTTBCTTCCEEEECT
T ss_pred EEEE-CCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEEEECCCC-C-----CEEEEEEEEECCCCCEEHHHEEEEECC
T ss_conf 6878-69989999998999879959999899899998500011458-6-----126899998107777555576998889
Q ss_pred CCEEEEEEECCCCHHHCCEE
Q ss_conf 88599997406860118728
Q gi|254780621|r 115 NGLLYLELLRSVPERMKPRR 134 (157)
Q Consensus 115 nGiLtI~lpK~~pe~~~~r~ 134 (157)
||||+|++||..|++..|+.
T Consensus 78 dGiL~I~~pK~~~~~~~p~p 97 (101)
T 2wj5_A 78 EGVLSIQATPASAQASLPSP 97 (101)
T ss_dssp TSEEEEEECBCCCCCSSCC-
T ss_pred CCEEEEEEECCCCCCCCCCC
T ss_conf 94799998757754357979
No 10
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.67 E-value=2.5e-16 Score=119.94 Aligned_cols=85 Identities=20% Similarity=0.335 Sum_probs=67.0
Q ss_pred EEEEECCC--CEEEEEEC-CCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEE--EEE
Q ss_conf 68994899--39999970-11770214999962179999730332355662134553023046889738661581--038
Q gi|254780621|r 38 DIERTGEN--AYRITIAV-SGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVM--SAS 112 (157)
Q Consensus 38 dI~~~~e~--~y~i~~~l-PG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~--~A~ 112 (157)
.+.++.+. +|.|+++| |||+|+||+|+++++.|+|+|+++.++.... .+++.+|+|.|+|.||++|+.. +|+
T Consensus 224 ~~v~~~d~g~k~hlev~vdPGfk~EDI~V~v~~n~L~IsGe~k~e~~~~~---~~~~~~reF~Rs~~LP~~VD~~~I~A~ 300 (314)
T 2bol_A 224 EIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTEN---ASHSEHREFYKAFVTPEVVDASKTQAE 300 (314)
T ss_dssp EEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC---------------CEEEEEEEECSSEECGGGCEEE
T ss_pred CEEECCCCCEEEEEEEECCCCCCHHHCEEEEECCEEEEEEEECCCCCCCC---CCEEEEEEEEEEEECCCCCCHHHEEEE
T ss_conf 54332579768999994299977799099999999999999843244577---668999999999889887374034999
Q ss_pred EECCEEEEEEECC
Q ss_conf 5288599997406
Q gi|254780621|r 113 LENGLLYLELLRS 125 (157)
Q Consensus 113 ~~nGiLtI~lpK~ 125 (157)
|+||||+|++|+.
T Consensus 301 l~dGiLtI~~Pl~ 313 (314)
T 2bol_A 301 IVDGLMVVEAPLF 313 (314)
T ss_dssp EETTEEEEEEEEE
T ss_pred EECCEEEEEEECC
T ss_conf 8799999998678
No 11
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta fold and the C-terminal all beta domain., structural genomics, PSI-2; 2.00A {Nostoc SP}
Probab=98.23 E-value=6.6e-06 Score=55.47 Aligned_cols=62 Identities=15% Similarity=0.275 Sum_probs=54.2
Q ss_pred CCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCC---CEEEEEEEECCEEE
Q ss_conf 899399999701177021499996217999973033235566213455302304688973866---15810385288599
Q gi|254780621|r 43 GENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADF---VEVMSASLENGLLY 119 (157)
Q Consensus 43 ~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~---ve~~~A~~~nGiLt 119 (157)
+..+|.+.+.|||++|++|++.-.++-|+|+. |.|+|.+.||.- ..+.+|.|++|.|+
T Consensus 303 ~~~~~~~~l~lP~~~~~~l~l~~~gdeL~v~~-------------------g~~rR~i~LP~~l~~~~v~~A~~~~~~L~ 363 (374)
T 3igf_A 303 DTHNRQVRLFLPGFDKKQVKLTQYGPEVTVEA-------------------GDQRRNIFLPPALSGRPITGAKFQNNYLI 363 (374)
T ss_dssp ETTTTEEEEECTTCCGGGCEEEEETTEEEEEE-------------------TTEEEEEECCTTTTTCCEEEEEEETTEEE
T ss_pred ECCCEEEEEECCCCCHHHEEEEEECCEEEEEE-------------------CCEEEEEECCHHHCCCCCCCEEEECCEEE
T ss_conf 37966999989999768838999788899999-------------------99974236986884898675299899999
Q ss_pred EEEE
Q ss_conf 9974
Q gi|254780621|r 120 LELL 123 (157)
Q Consensus 120 I~lp 123 (157)
|++-
T Consensus 364 i~F~ 367 (374)
T 3igf_A 364 ISFL 367 (374)
T ss_dssp EEEC
T ss_pred EEEE
T ss_conf 9987
No 12
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=96.60 E-value=0.016 Score=34.51 Aligned_cols=78 Identities=14% Similarity=0.054 Sum_probs=58.1
Q ss_pred CCEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEE--EE
Q ss_conf 8436899489939999970117702149999621799997303323556621345530230468897386615810--38
Q gi|254780621|r 35 PPYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVMS--AS 112 (157)
Q Consensus 35 P~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~~--A~ 112 (157)
+.+|=+++++ ...|.+.+||+.++++.|++..+.|.+...-.. +. .|...+.|...|++.. .+
T Consensus 3 ~R~dW~Qt~~-~V~i~i~~~~v~~~~v~v~~~~~~l~v~~~~~~----~~----------~~~~~~~L~~~I~p~~s~~~ 67 (92)
T 2xcm_C 3 YRHEYYQKPE-EVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPG----ED----------AYYLQPRLFGKIIPDKCKYE 67 (92)
T ss_dssp SEEEEEEETT-EEEEEEECCSCCGGGEEEEECSSBEEEEECCTT----SC----------CEEECCBBSSCBCGGGCEEE
T ss_pred CCCCEEECCC-EEEEEEEECCCCHHHEEEEECCCEEEEEEECCC----CC----------EEEEEEECCCCCCCCCCEEE
T ss_conf 7754696899-999999958997103499973888999984489----93----------67787132143974116999
Q ss_pred EECCEEEEEEECCCC
Q ss_conf 528859999740686
Q gi|254780621|r 113 LENGLLYLELLRSVP 127 (157)
Q Consensus 113 ~~nGiLtI~lpK~~p 127 (157)
+.+|-+.|+|.|..+
T Consensus 68 i~~~kvei~L~K~~~ 82 (92)
T 2xcm_C 68 VLSTKIEICLAKADI 82 (92)
T ss_dssp ECSSCEEEEEEBSSS
T ss_pred EECCEEEEEEEECCC
T ss_conf 959999999998999
No 13
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.44 E-value=0.03 Score=32.88 Aligned_cols=90 Identities=10% Similarity=0.131 Sum_probs=63.6
Q ss_pred CEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEE-EEECCEEEEEEECCCCCEEEEEEE-
Q ss_conf 436899489939999970117702149999621799997303323556621345-530230468897386615810385-
Q gi|254780621|r 36 PYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHR-GIAKRAFERRFQLADFVEVMSASL- 113 (157)
Q Consensus 36 ~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~-e~~~~~F~R~f~Lp~~ve~~~A~~- 113 (157)
.+|=|+++++...|.+-+-|+.+++++|++.++.|+|.-.-..... .. +|- .-....|...+.|-..|++...++
T Consensus 21 r~dwyQt~~~~V~IsI~~K~v~ke~v~V~f~~~sl~v~~~~~~~~~--~~-~~~~~~~~~~~~~~~~L~~~I~p~~s~~~ 97 (134)
T 1wh0_A 21 KNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNF--LR-LHPGCGPHTTFRWQVKLRNLIEPEQCTFC 97 (134)
T ss_dssp CEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHH--HH-HSTTCCTTSCEEEEEEBSSCEEEEEEEEE
T ss_pred CCCEEECCCCEEEEEEEECCCCCHHEEEEEECCEEEEEEECCCCCC--EE-ECCCCCCCCEEEEECCCCCCCCCHHCEEE
T ss_conf 4560764897899999967888303189986799999987788853--01-02366777027872214464160043899
Q ss_pred -ECCEEEEEEECCCCH
Q ss_conf -288599997406860
Q gi|254780621|r 114 -ENGLLYLELLRSVPE 128 (157)
Q Consensus 114 -~nGiLtI~lpK~~pe 128 (157)
...-+.|+|.|..+.
T Consensus 98 v~~~kvei~L~K~~~~ 113 (134)
T 1wh0_A 98 FTASRIDICLRKRQSQ 113 (134)
T ss_dssp ECSSEEEEEEEESSSC
T ss_pred ECCCEEEEEEEECCCC
T ss_conf 7799899999978999
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=95.70 E-value=0.062 Score=30.91 Aligned_cols=79 Identities=13% Similarity=0.136 Sum_probs=58.7
Q ss_pred CCEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEE--EE
Q ss_conf 8436899489939999970117702149999621799997303323556621345530230468897386615810--38
Q gi|254780621|r 35 PPYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVMS--AS 112 (157)
Q Consensus 35 P~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~~--A~ 112 (157)
..|+=++++ +...|.+.+||+.++++.|++....|.+...... +. .|...+.|...|++.. .+
T Consensus 10 ~ry~W~Qt~-~~V~i~i~~~~v~~~~v~v~~~~~~l~v~~~~~~----~~----------~y~~~~~L~~~I~~e~s~~~ 74 (114)
T 1rl1_A 10 IKYDWYQTE-SQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS----GE----------DYNLKLELLHPIIPEQSTFK 74 (114)
T ss_dssp CCEEEEECS-SEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT----SS----------EEEEEECBSSCCCGGGEEEE
T ss_pred CCEEEEECC-CEEEEEEEECCCCHHHEEEEEECCEEEEEEECCC----CC----------EEEEEEECCCCCCCHHCEEE
T ss_conf 578689789-9999999959997556599996598999997699----95----------79998553674574114999
Q ss_pred EECCEEEEEEECCCCH
Q ss_conf 5288599997406860
Q gi|254780621|r 113 LENGLLYLELLRSVPE 128 (157)
Q Consensus 113 ~~nGiLtI~lpK~~pe 128 (157)
+.++-+.|+|.|..+.
T Consensus 75 v~~~kiei~L~K~e~~ 90 (114)
T 1rl1_A 75 VLSTKIEIKLKKPEAV 90 (114)
T ss_dssp ECSSSEEEEEECSSCC
T ss_pred EECCEEEEEEEECCCC
T ss_conf 9699999999979999
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=95.39 E-value=0.14 Score=28.63 Aligned_cols=79 Identities=10% Similarity=0.200 Sum_probs=56.6
Q ss_pred CCCCCCEEEEEECCCCEEEEEECCCCC--HHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE
Q ss_conf 788884368994899399999701177--021499996217999973033235566213455302304688973866158
Q gi|254780621|r 31 TSAYPPYDIERTGENAYRITIAVSGFH--PSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV 108 (157)
Q Consensus 31 ~~~~P~~dI~~~~e~~y~i~~~lPG~~--kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~ 108 (157)
.-.+|.+.|.++ ++...|.+-+|-+. ..++++.+++...+.-. .-|-.+..||..+..
T Consensus 14 ~MiTP~F~isQD-d~~V~I~I~~p~~r~s~~~~ei~id~~~F~F~~-------------------~PYyLRL~fP~~lve 73 (115)
T 3eud_A 14 KMITPRFSITQD-EEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-------------------SPYYLRLRFPHELID 73 (115)
T ss_dssp CCBCCCEEEEEC-SSEEEEEEECCSCCCCSSSCEEEEETTEEEEEE-------------------TTEEEEEECSSCEEC
T ss_pred CEECCEEEEEEC-CCEEEEEEEECCCCCCCCCEEEEECCCEEEEEC-------------------CCCEEEEECCCCEEC
T ss_conf 778750898868-998999999363002677618997488999963-------------------660699817972661
Q ss_pred ---EEEEE--ECCEEEEEEECCCCHH
Q ss_conf ---10385--2885999974068601
Q gi|254780621|r 109 ---MSASL--ENGLLYLELLRSVPER 129 (157)
Q Consensus 109 ---~~A~~--~nGiLtI~lpK~~pe~ 129 (157)
.+|+| +.|.++|++||..|-+
T Consensus 74 d~~~~asYD~~~g~~ti~lpKe~~GE 99 (115)
T 3eud_A 74 DERSTAQYDSKDECINVKVAKLNKNE 99 (115)
T ss_dssp STTCEEEEETTTTEEEEEEEESSTTC
T ss_pred CCCCEEEEECCCCEEEEEEECCCCCC
T ss_conf 88733889776658999980776898
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=92.14 E-value=0.48 Score=25.39 Aligned_cols=76 Identities=11% Similarity=0.212 Sum_probs=52.2
Q ss_pred CCCCEEEEEECCCCEEEEEECCCCC--HHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE--
Q ss_conf 8884368994899399999701177--021499996217999973033235566213455302304688973866158--
Q gi|254780621|r 33 AYPPYDIERTGENAYRITIAVSGFH--PSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV-- 108 (157)
Q Consensus 33 ~~P~~dI~~~~e~~y~i~~~lPG~~--kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~-- 108 (157)
.+|.+.|.++ ++...|.+-+|-+. ..++++.+++...+.-. .-|-.+..||..+.-
T Consensus 2 iTP~F~isQd-~~~v~i~I~~p~~r~s~~~~e~~i~~~~F~F~~-------------------~PYyLRL~fp~~l~ed~ 61 (134)
T 2k8q_A 2 ITPRFSITQD-EEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-------------------SPYYLRLRFPHELIDDE 61 (134)
T ss_dssp CCSEEEEEEC-SSEEEEEEECCSSCCCSSSCCCEECSSSEEECS-------------------SSSCEEECCSSCEECCS
T ss_pred CCCEEEEEEC-CCEEEEEEEECCCCCCCCCEEEEECCCEEEEEC-------------------CCCEEEEECCCCEECCC
T ss_conf 7862898768-998999999262013667527997488999962-------------------66068970797255088
Q ss_pred -EEEEE--ECCEEEEEEECCCCH
Q ss_conf -10385--288599997406860
Q gi|254780621|r 109 -MSASL--ENGLLYLELLRSVPE 128 (157)
Q Consensus 109 -~~A~~--~nGiLtI~lpK~~pe 128 (157)
.+|+| +.|.++|++||..|-
T Consensus 62 ~~~asYd~~~g~~ti~lpK~~~G 84 (134)
T 2k8q_A 62 RSTAQYDSKDECINVKVAKLNKN 84 (134)
T ss_dssp SCEEEEETTTTEEEEEEEESSTT
T ss_pred CCEEEEECCCCEEEEEEECCCCC
T ss_conf 73378866676899998277678
No 17
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi gb-m1}
Probab=91.44 E-value=0.72 Score=24.30 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=52.1
Q ss_pred EEEEEECCCCEEEEEECC-CCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEE--EEE
Q ss_conf 368994899399999701-17702149999621799997303323556621345530230468897386615810--385
Q gi|254780621|r 37 YDIERTGENAYRITIAVS-GFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVMS--ASL 113 (157)
Q Consensus 37 ~dI~~~~e~~y~i~~~lP-G~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~~--A~~ 113 (157)
|-=.++.+ ...|.+.|| |+.++||.|.+..+.|.|... ..++- .-.|...|++.. -.+
T Consensus 7 Y~W~Qt~~-eV~v~i~lp~~~~~~dv~v~~~~~~l~v~~~--------~~~~l----------~g~L~~~I~~~~s~w~~ 67 (131)
T 2o30_A 7 YTWDQELN-EINIQFPVTGDADSSAIKIRMVGKKICVKNQ--------GEIVI----------DGELLHEVDVSSLWWVI 67 (131)
T ss_dssp CEEEEETT-EEEEEEECC---CCSCEEEEEETTEEEEEET--------TEEEE----------EEEBSSCEEEEEEEEEE
T ss_pred EEEEEECC-EEEEEEECCCCCCCCEEEEEEEECEEEECCC--------CCEEE----------CCCCCCCCCCCCCEEEE
T ss_conf 73895789-9999998799975234999961046653268--------94078----------04404730343329998
Q ss_pred ECCEEEEEEECCCCH
Q ss_conf 288599997406860
Q gi|254780621|r 114 ENGLLYLELLRSVPE 128 (157)
Q Consensus 114 ~nGiLtI~lpK~~pe 128 (157)
+++.|.|+|.|..+.
T Consensus 68 ~~~~l~I~L~K~~~~ 82 (131)
T 2o30_A 68 NGDVVDVNVTKKRNE 82 (131)
T ss_dssp ETTEEEEEEEESSCC
T ss_pred ECCEEEEEEEECCCC
T ss_conf 099999999988998
No 18
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=84.35 E-value=2.1 Score=21.46 Aligned_cols=78 Identities=14% Similarity=0.173 Sum_probs=49.7
Q ss_pred CCCCCEEEEEECCCCEEEEEECC---CCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE
Q ss_conf 88884368994899399999701---177021499996217999973033235566213455302304688973866158
Q gi|254780621|r 32 SAYPPYDIERTGENAYRITIAVS---GFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEV 108 (157)
Q Consensus 32 ~~~P~~dI~~~~e~~y~i~~~lP---G~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~ 108 (157)
...|.|.=.++.+ ...|.+.+| +++++||.|.+..+.|.|..... ..+ ..|. |...|++
T Consensus 5 ~~~p~Y~W~QT~~-ev~I~I~~~~~~~~~~~di~v~i~~~~l~v~~~~~------~~~-----~~g~------L~~~I~~ 66 (131)
T 1wfi_A 5 SSGPNYRWTQTLA-ELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQ------PPV-----VDGE------LYNEVKV 66 (131)
T ss_dssp SSCCSSEEEECSS-EEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTS------CCS-----BCSC------BSSCBCS
T ss_pred CCCCCEEEEEECC-EEEEEEECCCCCCCCCHHEEEEEECCEEEEEECCC------CCC-----CCCC------CCCCCCC
T ss_conf 7889967884689-89999972799995001379997569999998995------102-----3575------3453056
Q ss_pred EE--EEEEC-CEEEEEEECCCC
Q ss_conf 10--38528-859999740686
Q gi|254780621|r 109 MS--ASLEN-GLLYLELLRSVP 127 (157)
Q Consensus 109 ~~--A~~~n-GiLtI~lpK~~p 127 (157)
+. -.+++ ++|.|+|.|..+
T Consensus 67 des~W~ied~~~l~I~L~K~~~ 88 (131)
T 1wfi_A 67 EESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp TTCEEEEETTTEEEEEEEBSSS
T ss_pred CCCEEEEECCCEEEEEEEECCC
T ss_conf 5468998189999999996768
No 19
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.43 E-value=3.1 Score=20.35 Aligned_cols=79 Identities=10% Similarity=0.174 Sum_probs=52.6
Q ss_pred CCEEEEEECCCCEEEEEECCCC---CHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEE-ECCCCCEEEE
Q ss_conf 8436899489939999970117---70214999962179999730332355662134553023046889-7386615810
Q gi|254780621|r 35 PPYDIERTGENAYRITIAVSGF---HPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRF-QLADFVEVMS 110 (157)
Q Consensus 35 P~~dI~~~~e~~y~i~~~lPG~---~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f-~Lp~~ve~~~ 110 (157)
+.|.=+++++ ...|.+.+||. .+++|.|++....|.|...-.. +..|. -.. .|...|++..
T Consensus 21 ~~Y~W~Qt~~-~V~I~i~~~~~~~~~~~~i~v~~~~~sl~v~i~~~~----g~~~~----------l~~~~L~~~I~~e~ 85 (127)
T 1x5m_A 21 SNYGWDQSDK-FVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN----GKSYS----------MIVNNLLKPISVEG 85 (127)
T ss_dssp CSCEEEEETT-EEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS----SSCEE----------EEEECBSSCCCTTT
T ss_pred CCEEEEECCC-EEEEEEECCCCCCCCHHHEEEEEECCEEEEEEECCC----CCCEE----------EEHHHHHCCCCHHH
T ss_conf 6577992789-899999888767777547799974599999987589----96237----------78678424246113
Q ss_pred --EEEECCEEEEEEECCCCH
Q ss_conf --385288599997406860
Q gi|254780621|r 111 --ASLENGLLYLELLRSVPE 128 (157)
Q Consensus 111 --A~~~nGiLtI~lpK~~pe 128 (157)
-.+.++-|.|+|.|..+.
T Consensus 86 s~~~v~~~ki~i~L~K~~~~ 105 (127)
T 1x5m_A 86 SSKKVKTDTVLILCRKKVEN 105 (127)
T ss_dssp CEEEEETTEEEEEEECSSSS
T ss_pred CEEEECCCEEEEEEEECCCC
T ss_conf 13576399799999974789
No 20
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=74.03 E-value=4.4 Score=19.43 Aligned_cols=79 Identities=10% Similarity=0.079 Sum_probs=52.3
Q ss_pred CCCEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEEEEE
Q ss_conf 88436899489939999970117702149999621799997303323556621345530230468897386615810385
Q gi|254780621|r 34 YPPYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVMSASL 113 (157)
Q Consensus 34 ~P~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~~A~~ 113 (157)
.|++-=+++.+ ...|.+.|+++.. .+|.++.+.|.+++..... +. .|...+.|-..|.+.....
T Consensus 4 ~P~v~W~Q~~~-~V~ltI~~~~~~~--~~v~i~~~~l~~~~~~~~~---g~----------~Y~~~l~L~~~I~pe~S~~ 67 (150)
T 2kmw_A 4 NPEVLWAQRSD-KVYLTVALPDAKD--ISVKCEPQGLFSFSALGAQ---GE----------RFEFSLELYGKIMTEYRKN 67 (150)
T ss_dssp CCCEEEEECSS-EEEEEECCSSEEE--EEECCCTTEEEEEEEETTT---TE----------EEEEEEEBSSCEEEEEEEE
T ss_pred CCCEEEEECCC-EEEEEEEECCCCC--CEEEEEECEEEEEEECCCC---CC----------EEEEEEEEECCCCHHHCEE
T ss_conf 99788856799-8999999589987--6489973648999621789---97----------7899998304547235567
Q ss_pred -ECCEEEEEEECCCCH
Q ss_conf -288599997406860
Q gi|254780621|r 114 -ENGLLYLELLRSVPE 128 (157)
Q Consensus 114 -~nGiLtI~lpK~~pe 128 (157)
..+-+.|+|.|..+.
T Consensus 68 v~~~kiei~L~K~e~~ 83 (150)
T 2kmw_A 68 VGLRNIIFSIQKEERS 83 (150)
T ss_dssp EESSSEEEEEEECCSS
T ss_pred ECCCEEEEEEEECCCC
T ss_conf 0687799999807888
No 21
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=72.92 E-value=4.7 Score=19.26 Aligned_cols=77 Identities=9% Similarity=0.055 Sum_probs=52.1
Q ss_pred CEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEEE--EE
Q ss_conf 4368994899399999701177021499996217999973033235566213455302304688973866158103--85
Q gi|254780621|r 36 PYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVMSA--SL 113 (157)
Q Consensus 36 ~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~~A--~~ 113 (157)
++-=+++. +...|.+.|||+. +.+|+++...|++++.... .+. .|...+.|...|.+..+ +.
T Consensus 5 ~~~W~Qt~-~~V~iti~~~~~~--~~~v~~~~~~~~~~~~~~~---~~~----------~y~~~l~L~~~I~pe~S~~~v 68 (125)
T 1ejf_A 5 SAKWYDRR-DYVFIEFCVEDSK--DVNVNFEKSKLTFSCLGGS---DNF----------KHLNEIDLFHCIDPNDSKHKR 68 (125)
T ss_dssp CEEEEECS-SEEEEEECCTTEE--EEEEEEETTEEEEEEEETT---TTE----------EEEEEEEBSSCEEEEEEEEEE
T ss_pred CCEEEECC-CEEEEEEEECCCC--CCEEEEEECEEEEEEEECC---CCC----------EEEEEEECCCCCCCCCCEEEE
T ss_conf 81676669-9899999959998--7569998334899998257---895----------189999822443035465998
Q ss_pred ECCEEEEEEECCCCH
Q ss_conf 288599997406860
Q gi|254780621|r 114 ENGLLYLELLRSVPE 128 (157)
Q Consensus 114 ~nGiLtI~lpK~~pe 128 (157)
.++-+.|+|.|..+.
T Consensus 69 ~~~kvei~l~Kk~~~ 83 (125)
T 1ejf_A 69 TDRSILCCLRKGESG 83 (125)
T ss_dssp CSSCEEEEEEESSTT
T ss_pred CCCEEEEEEEECCCC
T ss_conf 699799999983578
No 22
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=72.29 E-value=4.9 Score=19.17 Aligned_cols=73 Identities=19% Similarity=0.153 Sum_probs=47.9
Q ss_pred CCCEEEEEECCCCEEEEEECC-CCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEEE-
Q ss_conf 884368994899399999701-177021499996217999973033235566213455302304688973866158103-
Q gi|254780621|r 34 YPPYDIERTGENAYRITIAVS-GFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVMSA- 111 (157)
Q Consensus 34 ~P~~dI~~~~e~~y~i~~~lP-G~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~~A- 111 (157)
.|.|-=.++.+ ...|.+.|| |+.++||.|++....|+|...- +.+ ..| .|...|++...
T Consensus 13 ~~~Y~W~QT~~-eV~V~i~lp~~~~~kdv~v~i~~~~l~v~~~g--------~~~----l~g------eL~~~I~~deS~ 73 (157)
T 2rh0_A 13 TPWGQWYQTLE-EVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG--------REI----LKG------KLFDSTIADEGT 73 (157)
T ss_dssp CSSEEEEECSS-EEEEEEECCTTCCGGGEEEEECSSEEEEEETT--------EEE----EEE------EBSSCBCGGGCE
T ss_pred CCCEEEEEECC-EEEEEEECCCCCCHHHEEEEEECCEEEEECCC--------CEE----EEH------HHCCCCCCCCCE
T ss_conf 98879877889-99999988999864447999871999886188--------504----623------313775645477
Q ss_pred -EEE-CCEEEEEEECC
Q ss_conf -852-88599997406
Q gi|254780621|r 112 -SLE-NGLLYLELLRS 125 (157)
Q Consensus 112 -~~~-nGiLtI~lpK~ 125 (157)
+++ +++|.|.+-|.
T Consensus 74 Wtled~~~~~i~l~k~ 89 (157)
T 2rh0_A 74 WTLEDRKMVRIVLTKT 89 (157)
T ss_dssp EEEECCCEEEEEEEBS
T ss_pred EEECCCCEEEEEEEEE
T ss_conf 8954998899999981
No 23
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=49.46 E-value=11 Score=16.96 Aligned_cols=13 Identities=23% Similarity=0.565 Sum_probs=4.6
Q ss_pred EEEEEECCEEEEE
Q ss_conf 4999962179999
Q gi|254780621|r 61 ITIEVDSSILMVR 73 (157)
Q Consensus 61 i~V~v~~~~LtI~ 73 (157)
++++..+|+|+|.
T Consensus 30 ~D~e~~~gvLti~ 42 (106)
T 1ew4_A 30 IDCEINGGVLTIT 42 (106)
T ss_dssp CEEEEETTEEEEE
T ss_pred EEEECCCCEEEEE
T ss_conf 5567259989999
No 24
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=44.52 E-value=12 Score=16.79 Aligned_cols=18 Identities=22% Similarity=0.632 Sum_probs=12.6
Q ss_pred HHHEEEEEECCEEEEEEE
Q ss_conf 021499996217999973
Q gi|254780621|r 58 PSEITIEVDSSILMVRGE 75 (157)
Q Consensus 58 kedi~V~v~~~~LtI~g~ 75 (157)
|++++|+++++.++|+|.
T Consensus 20 P~gV~V~i~~~~i~VkGp 37 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGP 37 (100)
T ss_dssp CSSCEEEEETTEEEEEET
T ss_pred CCCCEEEEECCEEEEECC
T ss_conf 999799996999999929
No 25
>2ks0_A Uncharacterized protein; YABP family, structural genomics, PSI-2, protein structure initiative; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=38.02 E-value=17 Score=15.84 Aligned_cols=25 Identities=40% Similarity=0.708 Sum_probs=20.9
Q ss_pred ECCCCCHHHEEEEEECCEEEEEEEE
Q ss_conf 7011770214999962179999730
Q gi|254780621|r 52 AVSGFHPSEITIEVDSSILMVRGEK 76 (157)
Q Consensus 52 ~lPG~~kedi~V~v~~~~LtI~g~~ 76 (157)
+|--|+.+.|-++..-+.|+|+|+.
T Consensus 14 ~V~SFDee~i~LeT~~G~L~IkGe~ 38 (71)
T 2ks0_A 14 KVQSFDPKEILLETIQGVLSIKGEK 38 (71)
T ss_dssp EEEEECSSEEEEEETTEEEEEEEEC
T ss_pred EEEEECCCEEEEEECCCEEEEECCC
T ss_conf 8888999779999576189997257
No 26
>3jyw_H 60S ribosomal protein L9(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_H
Probab=32.94 E-value=21 Score=15.20 Aligned_cols=19 Identities=32% Similarity=0.634 Sum_probs=14.3
Q ss_pred HHHEEEEEECCEEEEEEEE
Q ss_conf 0214999962179999730
Q gi|254780621|r 58 PSEITIEVDSSILMVRGEK 76 (157)
Q Consensus 58 kedi~V~v~~~~LtI~g~~ 76 (157)
|++++|++.++.|+|+|-+
T Consensus 8 P~~V~v~i~~~~v~vkGp~ 26 (179)
T 3jyw_H 8 PEGVTVSIKSRIVKVVGPR 26 (179)
T ss_dssp CTTCEEEEETTEEEEECSS
T ss_pred CCCCEEEEECCEEEEECCC
T ss_conf 9998999979999998789
No 27
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=31.76 E-value=24 Score=14.89 Aligned_cols=17 Identities=18% Similarity=0.565 Sum_probs=11.8
Q ss_pred HHEEEEEECCEEEEEEE
Q ss_conf 21499996217999973
Q gi|254780621|r 59 SEITIEVDSSILMVRGE 75 (157)
Q Consensus 59 edi~V~v~~~~LtI~g~ 75 (157)
..|+++++++.|+|+..
T Consensus 37 ~~i~i~~~~~~i~v~~~ 53 (178)
T 1vq8_E 37 PDIDVSVDGDTVVIESD 53 (178)
T ss_dssp TTCEEEEETTEEEEECS
T ss_pred CCEEEEECCCEEEEECC
T ss_conf 83899983998999427
No 28
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=31.71 E-value=24 Score=14.88 Aligned_cols=18 Identities=22% Similarity=0.632 Sum_probs=12.3
Q ss_pred HHHEEEEEECCEEEEEEE
Q ss_conf 021499996217999973
Q gi|254780621|r 58 PSEITIEVDSSILMVRGE 75 (157)
Q Consensus 58 kedi~V~v~~~~LtI~g~ 75 (157)
|++++|+++++.|+|+|-
T Consensus 13 P~gV~v~i~~~~v~vkGp 30 (192)
T 2zkr_e 13 PENVDITLKGRTVIVKGP 30 (192)
T ss_dssp CTTCEEEEETTEEEEEET
T ss_pred CCCCEEEEECCEEEEECC
T ss_conf 999899998999999959
No 29
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=30.29 E-value=25 Score=14.73 Aligned_cols=16 Identities=25% Similarity=0.561 Sum_probs=9.6
Q ss_pred HHEEEEEECCEEEEEE
Q ss_conf 2149999621799997
Q gi|254780621|r 59 SEITIEVDSSILMVRG 74 (157)
Q Consensus 59 edi~V~v~~~~LtI~g 74 (157)
.++.+..+++.+.|..
T Consensus 38 ~~~~~~~~~~~i~v~~ 53 (177)
T 1rl6_A 38 PDMTITVEGNVITVTR 53 (177)
T ss_dssp TTCEEEEETTEEEEEC
T ss_pred CCCCCEECCCEEEEEE
T ss_conf 7410110686899996
No 30
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=28.81 E-value=27 Score=14.58 Aligned_cols=16 Identities=31% Similarity=0.536 Sum_probs=8.9
Q ss_pred HHEEEEEECCEEEEEE
Q ss_conf 2149999621799997
Q gi|254780621|r 59 SEITIEVDSSILMVRG 74 (157)
Q Consensus 59 edi~V~v~~~~LtI~g 74 (157)
..+.|..+++.+++..
T Consensus 66 ~~v~i~~~~~~i~v~~ 81 (212)
T 1nkw_E 66 TELTVRQDGDQLLVER 81 (212)
T ss_pred CCEEEEECCCEEEEEE
T ss_conf 8728884599999997
No 31
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=27.56 E-value=28 Score=14.44 Aligned_cols=71 Identities=15% Similarity=0.266 Sum_probs=42.4
Q ss_pred CCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCC-CCCCCEEEEEEECCEEEEEEECCCCCEEEEEEE--ECC-EEE
Q ss_conf 9939999970117702149999621799997303323-556621345530230468897386615810385--288-599
Q gi|254780621|r 44 ENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEE-KETVEYLHRGIAKRAFERRFQLADFVEVMSASL--ENG-LLY 119 (157)
Q Consensus 44 e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~-~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~~A~~--~nG-iLt 119 (157)
.+..-|.+.|+.+ .|.+|.++.+.|+.+|.-.... ..+ .-.|.-.+.|-..|.+...++ .+| .+.
T Consensus 22 kd~v~Lti~l~d~--~d~~i~l~~~~l~F~~~~~~~~g~~~---------~~~Y~~~Lelf~~I~pe~s~~~~~~~r~~~ 90 (134)
T 2cg9_X 22 RNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDEN---------VHHYQLHIDLYKEIIPEKTMHKVANGQHYF 90 (134)
T ss_dssp SSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC----------------CEEBCEEEECSSCCCSSSEEEEECCC--CE
T ss_pred CCEEEEEEEECCC--CCCEEEEEECEEEEEEEECCCCCCCC---------CEEEEEEEEECCCCCCCCCEEEECCCCEEE
T ss_conf 6889999995888--88758775074899988356567767---------605899997135568430337864886699
Q ss_pred EEEECC
Q ss_conf 997406
Q gi|254780621|r 120 LELLRS 125 (157)
Q Consensus 120 I~lpK~ 125 (157)
+.|.|.
T Consensus 91 ~~l~KK 96 (134)
T 2cg9_X 91 LKLYKK 96 (134)
T ss_dssp EEEEEC
T ss_pred EEEEEE
T ss_conf 999994
No 32
>2j01_H 50S ribosomal protein L6; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=26.57 E-value=24 Score=14.87 Aligned_cols=18 Identities=28% Similarity=0.599 Sum_probs=12.0
Q ss_pred HHHEEEEEECCEEEEEEE
Q ss_conf 021499996217999973
Q gi|254780621|r 58 PSEITIEVDSSILMVRGE 75 (157)
Q Consensus 58 kedi~V~v~~~~LtI~g~ 75 (157)
|++++|++.++.|+|+|.
T Consensus 12 P~gV~v~i~~~~i~vkGp 29 (180)
T 2j01_H 12 PKGVSVEVAPGRVKVKGP 29 (180)
T ss_dssp CTTCEEEECSSCEEEECS
T ss_pred CCCCEEEEECCEEEEECC
T ss_conf 999899995999999969
No 33
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Arabidopsis thaliana}
Probab=23.09 E-value=20 Score=15.42 Aligned_cols=17 Identities=41% Similarity=0.724 Sum_probs=10.6
Q ss_pred HHHEEEEEECCEEEEEE
Q ss_conf 02149999621799997
Q gi|254780621|r 58 PSEITIEVDSSILMVRG 74 (157)
Q Consensus 58 kedi~V~v~~~~LtI~g 74 (157)
|++++|+++++.|+|+|
T Consensus 54 P~gV~V~i~~~~i~VkG 70 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKG 70 (223)
T ss_dssp STTSCEEESSSEEEECC
T ss_pred CCCCEEEEECCEEEEEC
T ss_conf 99988999699999985
No 34
>1dkx_A Substrate binding domain of DNAK; DNAK, heat shock protein 70 kDa (HSP70), complex (molecular chaperone/peptide); 2.00A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1 PDB: 3dpo_A* 3dpp_A* 3dpq_A* 1dkz_A 1dky_A 1bpr_A 2bpr_A 1dg4_A
Probab=20.25 E-value=39 Score=13.56 Aligned_cols=26 Identities=23% Similarity=0.340 Sum_probs=18.3
Q ss_pred ECCEEEEEEECCCCHHHCCEEEEECCCC
Q ss_conf 2885999974068601187288733788
Q gi|254780621|r 114 ENGLLYLELLRSVPERMKPRRIEISQSP 141 (157)
Q Consensus 114 ~nGiLtI~lpK~~pe~~~~r~I~I~~~~ 141 (157)
.||+|+|+.--. ..-+.++|.|+...
T Consensus 92 ~nGiL~VsA~~~--~tg~~~~i~i~~~~ 117 (219)
T 1dkx_A 92 ADGILHVSAKDK--NSGKEQKITIKASS 117 (219)
T ss_dssp TTCCEEEEEEET--TTCCEEEEEECTTC
T ss_pred CCCCEEEEEEEC--CCCCEEEEEECCCC
T ss_conf 788689999986--89978889986899
Done!