HHsearch alignment for GI: 254780622 and conserved domain: COG1086
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=97.06 E-value=0.0079 Score=37.97 Aligned_cols=133 Identities=23% Similarity=0.301 Sum_probs=79.8
Q ss_pred CEEE-ECCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC--------C
Q ss_conf 6898-4056600000388999999986400013-4652125531032233343455899999998631013--------2
Q gi|254780622|r 118 PVLI-APAMNFMMWAKPATQRNVEILQKDGCYF-IGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSK--------E 187 (405)
Q Consensus 118 pi~i-aPaMn~~M~~~p~~~~nl~~L~~~g~~v-i~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~--------~ 187 (405)
T Consensus 180 ~iiiAips~~~~-----~~~~i~~~l~~~~~~v~~lP~~~~l~~--~~~~lreI~ieD-------LLgR~pV~~d~~~i~ 245 (588)
T COG1086 180 LILIAIPSASQE-----ERRRILLRLARTGIAVRILPQLTDLKD--LNGQLREIEIED-------LLGRPPVALDTELIG 245 (588)
T ss_pred EEEEECCCCCHH-----HHHHHHHHHHHCCCCEEECCCHHHHHH--HCCCCCCCCHHH-------HHCCCCCCCCHHHHH
T ss_conf 699964878899-----999999998755970785574899987--324654377989-------738999987879998
Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----------CCCCCEEEE---
Q ss_conf 001797789840420101021357621577278899999998258838998415667-----------765674675---
Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----------ADPPNVMTI--- 253 (405)
Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----------~~~~~~~~i--- 253 (405)
T Consensus 246 ~~~~gK~vLVTGag----------------GSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~i 308 (588)
T COG1086 246 AMLTGKTVLVTGGG----------------GSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYI 308 (588)
T ss_pred HHCCCCEEEEECCC----------------CCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCC-CCCEEEEE
T ss_conf 67079889996898----------------73679999999854987899961763779999999986278-75168996
Q ss_pred -EHHHHHHHHHHHHHCCCCCEEEEEHHHHH
Q ss_conf -46577899999985058887997404444
Q gi|254780622|r 254 -HVERAEDMLQEVLKALPVDIAVMVSAVSD 282 (405)
Q Consensus 254 -~v~t~~em~~~~~~~~~~D~~I~aAAVSD 282 (405)
T Consensus 309 gdVrD~~~~~~-~~~~~kvd~VfHAAA~KH 337 (588)
T COG1086 309 GDVRDRDRVER-AMEGHKVDIVFHAAALKH 337 (588)
T ss_pred CCCCCHHHHHH-HHHCCCCCEEEEHHHHCC
T ss_conf 35346899999-986388866887555536