HHsearch alignment for GI: 254780622 and conserved domain: COG1086

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=97.06  E-value=0.0079  Score=37.97  Aligned_cols=133  Identities=23%  Similarity=0.301  Sum_probs=79.8

Q ss_pred             CEEE-ECCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC--------C
Q ss_conf             6898-4056600000388999999986400013-4652125531032233343455899999998631013--------2
Q gi|254780622|r  118 PVLI-APAMNFMMWAKPATQRNVEILQKDGCYF-IGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSK--------E  187 (405)
Q Consensus       118 pi~i-aPaMn~~M~~~p~~~~nl~~L~~~g~~v-i~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~--------~  187 (405)
T Consensus       180 ~iiiAips~~~~-----~~~~i~~~l~~~~~~v~~lP~~~~l~~--~~~~lreI~ieD-------LLgR~pV~~d~~~i~  245 (588)
T COG1086         180 LILIAIPSASQE-----ERRRILLRLARTGIAVRILPQLTDLKD--LNGQLREIEIED-------LLGRPPVALDTELIG  245 (588)
T ss_pred             EEEEECCCCCHH-----HHHHHHHHHHHCCCCEEECCCHHHHHH--HCCCCCCCCHHH-------HHCCCCCCCCHHHHH
T ss_conf             699964878899-----999999998755970785574899987--324654377989-------738999987879998


Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----------CCCCCEEEE---
Q ss_conf             001797789840420101021357621577278899999998258838998415667-----------765674675---
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----------ADPPNVMTI---  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----------~~~~~~~~i---  253 (405)
T Consensus       246 ~~~~gK~vLVTGag----------------GSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~i  308 (588)
T COG1086         246 AMLTGKTVLVTGGG----------------GSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYI  308 (588)
T ss_pred             HHCCCCEEEEECCC----------------CCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCC-CCCEEEEE
T ss_conf             67079889996898----------------73679999999854987899961763779999999986278-75168996


Q ss_pred             -EHHHHHHHHHHHHHCCCCCEEEEEHHHHH
Q ss_conf             -46577899999985058887997404444
Q gi|254780622|r  254 -HVERAEDMLQEVLKALPVDIAVMVSAVSD  282 (405)
Q Consensus       254 -~v~t~~em~~~~~~~~~~D~~I~aAAVSD  282 (405)
T Consensus       309 gdVrD~~~~~~-~~~~~kvd~VfHAAA~KH  337 (588)
T COG1086         309 GDVRDRDRVER-AMEGHKVDIVFHAAALKH  337 (588)
T ss_pred             CCCCCHHHHHH-HHHCCCCCEEEEHHHHCC
T ss_conf             35346899999-986388866887555536