HHsearch alignment for GI: 254780622 and conserved domain: KOG1201

Probab=96.83  E-value=0.0049  Score=39.33  Aligned_cols=190  Identities=21%  Similarity=0.187  Sum_probs=98.7

Q ss_pred             HHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC--CCCCC---CC---CE
Q ss_conf             986310132001797789840420101021357621577278899999998258838998415--66776---56---74
Q gi|254780622|r  179 TWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP--VSIAD---PP---NV  250 (405)
Q Consensus       179 ~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~--~~~~~---~~---~~  250 (405)
T Consensus        25 ~~~~l~~~~k~v~g~~vLITGgg----------------~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~   88 (300)
T KOG1201          25 IKLLLPKPLKSVSGEIVLITGGG----------------SGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEA   88 (300)
T ss_pred             HHHHCCCCHHHCCCCEEEEECCC----------------CHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCE
T ss_conf             98755543344069889996898----------------60789999999970784899955651239999999844852


Q ss_pred             EEE--EHHHHHH---HHHHHHHCC-CCCEEEEEHHHHHHHHHH-HHHCCCCCCCCCCCCEEEEEE----CHHHHHHHHHC
Q ss_conf             675--4657789---999998505-888799740444443222-210112334557751045521----80689887621
Q gi|254780622|r  251 MTI--HVERAED---MLQEVLKAL-PVDIAVMVSAVSDWRFPK-IAGTKIKRKDIGDTMRIDLME----NPDILKIIGHH  319 (405)
Q Consensus       251 ~~i--~v~t~~e---m~~~~~~~~-~~D~~I~aAAVSDf~~~~-~~~~Kikk~s~~~~l~L~L~~----~pdIL~~i~~~  319 (405)
T Consensus        89 ~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k-----~~~vN~~~~f~t~kaFLP~M~~~  163 (300)
T KOG1201          89 KAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQK-----TFDVNTIAHFWTTKAFLPKMLEN  163 (300)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             5899558988999999999998619954998366424488756799899999-----99876689999999873888745


Q ss_pred             CCCCCEEEEEE--C-CC---C------------HHHHHHHHHHHHCCCCEE-----EEECCCCCCCCCCCCCEEEEEECC
Q ss_conf             48995899981--1-41---2------------389999999997499899-----992057767777766118999836
Q gi|254780622|r  320 QCRPSIVVGFA--A-ET---Q------------CIEQNAREKLLNKGADFI-----VSNCILPDTGFVGKEWNKVSIVFP  376 (405)
Q Consensus       320 k~~~~~lVGFk--a-ET---~------------~l~~~A~~Kl~~K~~D~I-----VAN~i~~~~~~fgsd~n~v~li~~  376 (405)
T Consensus       164 --~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~--Tgmf~~--------~~  231 (300)
T KOG1201         164 --NNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN--TGMFDG--------AT  231 (300)
T ss_pred             --CCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC--CCCCCC--------CC
T ss_conf             --796399835533135776532356518999999999999998538987269998432213--554478--------98


Q ss_pred             CCEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             9859727899899999999999998
Q gi|254780622|r  377 DKIEEYPELPKAEVADRLCHLIVEH  401 (405)
Q Consensus       377 ~~~~~~~~~sK~~iA~~Il~~i~~~  401 (405)
T Consensus       232 ~~~~l~P~L~p~~va~~Iv~ai~~n  256 (300)
T KOG1201         232 PFPTLAPLLEPEYVAKRIVEAILTN  256 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             8864368779799999999999819