HHsearch alignment for GI: 254780622 and conserved domain: PRK05557

Probab=97.35  E-value=0.00038  Score=46.44  Aligned_cols=107  Identities=27%  Similarity=0.298  Sum_probs=66.5

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCCCEEEE-----
Q ss_conf             017977898404201010213576215772788999999982588389984156677----------65674675-----
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA----------DPPNVMTI-----  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~----------~~~~~~~i-----  253 (405)
T Consensus         2 ~L~gK~~lITGg----------------s~GIG~aia~~la~~G~~Vii~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlt   65 (248)
T PRK05557          2 SLEGKVALVTGA----------------SRGIGRAIAERLAAQGANVVLNYASSEAGAEALVAEIGALGGKALAVQGDVA   65 (248)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             679988999489----------------7689999999999879989999698565899999999963995899990389


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH
Q ss_conf             4657789999998505-8887997404444432222101123345577510455218068988
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI  315 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~  315 (405)
T Consensus        66 ~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~----~~~~~~~~~~~~vN~~~~~~~~~~  124 (248)
T PRK05557         66 DAESIERAVDEAKAEFGGVDILVNNAGITRDNLLM----RMKEEDWDRVIDTNLTGVFNLTKA  124 (248)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999829971999899779999915----599999999998783049999999