HHsearch alignment for GI: 254780622 and conserved domain: PRK06949

Probab=96.87  E-value=0.0029  Score=40.78  Aligned_cols=83  Identities=28%  Similarity=0.309  Sum_probs=53.7

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEEEE----
Q ss_conf             200179778984042010102135762157727889999999825883899841566--------77-65674675----
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVMTI----  253 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~~i----  253 (405)
T Consensus         4 ~~~L~gKvalVTGas----------------~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv   67 (258)
T PRK06949          4 SINLEGKVALVTGAS----------------SGLGQRFAQVLSQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDV   67 (258)
T ss_pred             CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             887899989995857----------------7999999999998799999996988999999999996599289998268


Q ss_pred             -EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             -4657789999998505-8887997404444432
Q gi|254780622|r  254 -HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       254 -~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
T Consensus        68 ~~~~~v~~~v~~~~~~~G~iDiLVnnAG~~~~~~  101 (258)
T PRK06949         68 TDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQK  101 (258)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             9999999999999998499989998998899989