HHsearch alignment for GI: 254780622 and conserved domain: PRK12367

Probab=96.18  E-value=0.023  Score=34.95  Aligned_cols=79  Identities=24%  Similarity=0.316  Sum_probs=52.8

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE-CCCC---CCCCCCEEEEEHHHHHHHHH
Q ss_conf             0017977898404201010213576215772788999999982588389984-1566---77656746754657789999
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS-GPVS---IADPPNVMTIHVERAEDMLQ  263 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~-g~~~---~~~~~~~~~i~v~t~~em~~  263 (405)
T Consensus        13 ~~~kgKtIgITGA----------------sGaLG~AL~k~f~~~GakVIalTh~~~~~~~~~~~~p~~wi~W~cG~E--~   74 (250)
T PRK12367         13 SRWNGKRIGITGA----------------SGALGKALTKLFRAKGAKVIGLTHSKINNSEISDESPNEWVSWECGKE--S   74 (250)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCH--H
T ss_conf             5638987999678----------------738999999999988998999836888875455678952898434998--9


Q ss_pred             HHHHCC-CCCEEEEEHHHHHHH
Q ss_conf             998505-888799740444443
Q gi|254780622|r  264 EVLKAL-PVDIAVMVSAVSDWR  284 (405)
Q Consensus       264 ~~~~~~-~~D~~I~aAAVSDf~  284 (405)
T Consensus        75 ~L~~~LkkiDILILNHGIn~~~   96 (250)
T PRK12367         75 SLDKTLAKIDVLILNHGINPGG   96 (250)
T ss_pred             HHHHHHHHCCEEEECCCCCCCC
T ss_conf             9999987588999838777455