HHsearch alignment for GI: 254780622 and conserved domain: TIGR02700
>TIGR02700 flavo_MJ0208 archaeoflavoprotein, MJ0208 family; InterPro: IPR014073 This entry describes one of two paralogous families of archaeal flavoprotein. The other, described by IPR014072 from INTERPRO and typified by the partially characterised AF1518 of ArchaArchaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown..
Probab=99.70 E-value=6.8e-17 Score=128.52 Aligned_cols=117 Identities=29% Similarity=0.472 Sum_probs=92.2
Q ss_pred EEEEEEECHHH-HHHHHHHHHHHHHC--CCEEEEEECHHHHHHCCHH----HHHHHHCCCCCCCCCC-CCCCCCCCCC--
Q ss_conf 69999528478-99999999999987--9889998585686306989----9999747975820767-8877877430--
Q gi|254780622|r 7 KIALIMCGSVA-VYKSLDLIRRLRER--GAVVIPVMTKSAQKFITPL----IVGAISNRRVYTHLLS-YKEGYESNHI-- 76 (405)
Q Consensus 7 ~IllgvtGsia-a~k~~~l~~~L~~~--g~~V~vv~T~~A~~fi~~~----~l~~lt~~~v~~~~~~-~~~~~~~~Hi-- 76 (405)
T Consensus 1 rI~WgITGAgHlL~esfqvmKelk~~~~el~v~t~vSrAgEEVvrMyGL~~~L~~Is~G~yyeE~f~esE~g~SsPi~GR 80 (237)
T TIGR02700 1 RIAWGITGAGHLLDESFQVMKELKRRIEELKVSTYVSRAGEEVVRMYGLFDELVEISNGDYYEEVFLESEEGASSPIVGR 80 (237)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCC
T ss_conf 90331033567788899999998630866346631001322335411311566621589600201010478888971012
Q ss_pred -CCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHH--CCCCCEEEECC
Q ss_conf -0114465578841118889885202455214666752--27996898405
Q gi|254780622|r 77 -QLANECDLLVVAPASANFIAHVAHGMVYDLASAILLA--KGDQPVLIAPA 124 (405)
Q Consensus 77 -~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la--~~~~pi~iaPa 124 (405)
T Consensus 81 faLgk-YD~LivsPAT~NTVaKia~GIADsLVTNAvaQAgKG~Vpv~vVPv 130 (237)
T TIGR02700 81 FALGK-YDLLIVSPATANTVAKIAYGIADSLVTNAVAQAGKGDVPVLVVPV 130 (237)
T ss_pred CCCCC-CCEEEECCCCCCCHHHEEECCHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 32453-265787585102001100021003567677522377543588875