HHsearch alignment for GI: 254780622 and conserved domain: TIGR03206
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.99 E-value=0.0035 Score=40.28 Aligned_cols=119 Identities=24% Similarity=0.242 Sum_probs=69.5
Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC--------CCC-CCCCEE-----EEEH
Q ss_conf 17977898404201010213576215772788999999982588389984156--------677-656746-----7546
Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV--------SIA-DPPNVM-----TIHV 255 (405)
Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~--------~~~-~~~~~~-----~i~v 255 (405)
T Consensus 1 L~gKvalITG~----------------s~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~d~ 64 (250)
T TIGR03206 1 LKDKTAIVTGG----------------GGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDR 64 (250)
T ss_pred CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf 95199999685----------------76899999999998799999997988999999999995399289999448999
Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEEEE
Q ss_conf 57789999998505-888799740444443222210112334557751045521806----8988762148995899981
Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVGFA 330 (405)
Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVGFk 330 (405)
T Consensus 65 ~~v~~~v~~~~~~~G~iDilvnnAg~~~~~~~~----~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--~G~IVnis 138 (250)
T TIGR03206 65 DSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFT----KTEPPLWERLIAINLTGALHMHHAVLPGMVERG--AGRIVNIA 138 (250)
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEEEC
T ss_conf 999999999999759997999898889998903----499999999999982999999999999999749--91799965