Query         gi|254780622|ref|YP_003065035.1| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 405
No_of_seqs    175 out of 2564
Neff          6.1 
Searched_HMMs 39220
Date          Sun May 29 21:25:59 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780622.hhm -d /home/congqian_1/database/cdd/Cdd.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PRK13982 bifunctional SbtC-lik 100.0       0       0  992.1  37.4  402    1-404    67-473 (476)
  2 PRK05579 bifunctional phosphop 100.0       0       0  968.2  40.3  390    3-399     2-392 (392)
  3 COG0452 Dfp Phosphopantothenoy 100.0       0       0  738.2  32.8  390    2-403     1-392 (392)
  4 TIGR00521 coaBC_dfp phosphopan 100.0       0       0  688.0  32.1  395    3-399     1-418 (418)
  5 PRK07313 phosphopantothenoylcy 100.0       0       0  442.5  17.6  178    4-182     1-179 (180)
  6 pfam04127 DFP DNA / pantothena 100.0       0       0  429.6  18.3  189  191-388     1-197 (197)
  7 PRK09620 hypothetical protein; 100.0       0       0  420.3  20.8  206  190-404     1-225 (229)
  8 PRK06732 phosphopantothenate-- 100.0       0       0  419.0  20.8  200  193-401     1-227 (228)
  9 TIGR02114 coaB_strep phosphopa 100.0       0       0  322.0  14.2  201  193-401     1-252 (253)
 10 KOG0672 consensus              100.0 1.8E-42       0  293.0   7.5  178    4-184    18-207 (218)
 11 PRK08305 spoVFB dipicolinate s 100.0 1.3E-40 2.8E-45  281.1  15.6  172    1-183     1-183 (195)
 12 TIGR02113 coaC_strep phosphopa 100.0 2.1E-41       0  286.3  11.2  174    6-180     1-175 (177)
 13 pfam02441 Flavoprotein Flavopr 100.0 1.2E-31   3E-36  223.5  12.8  116    6-124     1-118 (118)
 14 KOG2728 consensus              100.0 2.1E-28 5.3E-33  202.6  14.8  202  190-401    28-292 (302)
 15 PRK06029 3-octaprenyl-4-hydrox  99.9 3.9E-23 9.9E-28  168.7  12.7  159    6-181     2-169 (187)
 16 PRK05920 aromatic acid decarbo  99.8   2E-19   5E-24  144.9  15.4  161    5-181     4-185 (205)
 17 TIGR00421 ubiX_pad polyprenyl   99.8 8.3E-18 2.1E-22  134.4  13.2  157    7-181     1-166 (181)
 18 COG0163 UbiX 3-polyprenyl-4-hy  99.8 4.3E-17 1.1E-21  129.8  14.5  156    5-181     2-171 (191)
 19 TIGR02852 spore_dpaB dipicolin  99.7 1.8E-17 4.5E-22  132.3  10.3  170    6-194     1-182 (188)
 20 TIGR02700 flavo_MJ0208 archaeo  99.7 6.8E-17 1.7E-21  128.5   8.3  117    7-124     1-130 (237)
 21 TIGR02699 archaeo_AfpA archaeo  99.7 2.9E-16 7.3E-21  124.5   7.0  143    7-151     1-167 (176)
 22 COG1036 Archaeal flavoproteins  99.6 1.6E-14 4.1E-19  113.2   9.3  143    4-149     7-173 (187)
 23 PRK06550 fabG 3-ketoacyl-(acyl  97.7 0.00021 5.2E-09   48.2   7.8  108  189-316     2-111 (237)
 24 PRK07577 short chain dehydroge  97.7 0.00023   6E-09   47.8   8.0   81  190-286     1-84  (234)
 25 PRK07856 short chain dehydroge  97.7 0.00031 7.8E-09   47.1   8.3  107  187-314     3-116 (254)
 26 PRK05565 fabG 3-ketoacyl-(acyl  97.6 0.00024 6.2E-09   47.7   6.8  184  189-398     2-227 (247)
 27 PRK06523 short chain dehydroge  97.6 0.00064 1.6E-08   45.0   8.9  154  187-360     4-183 (260)
 28 PRK12825 fabG 3-ketoacyl-(acyl  97.6 0.00049 1.2E-08   45.8   8.3  112  189-320     4-135 (250)
 29 PRK12826 3-ketoacyl-(acyl-carr  97.6 0.00023 5.8E-09   47.9   6.4  122  188-329     2-142 (253)
 30 PRK06171 sorbitol-6-phosphate   97.5 0.00074 1.9E-08   44.6   8.6   78  189-282     6-89  (266)
 31 PRK08159 enoyl-(acyl carrier p  97.5 0.00022 5.5E-09   48.0   5.7   37  188-238     6-42  (272)
 32 PRK07201 short chain dehydroge  97.5  0.0004   1E-08   46.3   7.1  185  187-401   371-593 (663)
 33 PRK06505 enoyl-(acyl carrier p  97.5 0.00017 4.4E-09   48.6   5.0   34    1-38      1-39  (271)
 34 PRK06398 aldose dehydrogenase;  97.5 0.00053 1.4E-08   45.5   7.5  120  188-330     2-131 (256)
 35 PRK08945 short chain dehydroge  97.5 0.00049 1.3E-08   45.7   7.2   84  183-282     4-105 (245)
 36 PRK05653 fabG 3-ketoacyl-(acyl  97.5 0.00059 1.5E-08   45.2   7.4  108  189-316     2-124 (246)
 37 PRK06500 short chain dehydroge  97.4 0.00069 1.8E-08   44.8   7.1   81  189-285     3-95  (249)
 38 PRK12428 3-alpha-hydroxysteroi  97.4  0.0011 2.8E-08   43.5   8.2   33    1-37      1-34  (261)
 39 PRK12828 short chain dehydroge  97.4 0.00082 2.1E-08   44.3   7.5  180  188-398     3-218 (239)
 40 PRK07831 short chain dehydroge  97.4 0.00059 1.5E-08   45.3   6.7  120  187-327    11-152 (261)
 41 PRK05866 short chain dehydroge  97.4 0.00062 1.6E-08   45.1   6.7  184  186-399    34-256 (290)
 42 PRK08416 7-alpha-hydroxysteroi  97.4 0.00081 2.1E-08   44.3   7.0   78  188-281     4-98  (260)
 43 PRK09242 tropinone reductase;   97.4 0.00091 2.3E-08   44.0   7.2  160  188-371     6-201 (258)
 44 PRK05557 fabG 3-ketoacyl-(acyl  97.4 0.00038 9.8E-09   46.4   5.2  107  189-315     2-124 (248)
 45 PRK08220 2,3-dihydroxybenzoate  97.4 0.00054 1.4E-08   45.5   5.9  108  188-315     4-118 (253)
 46 PRK08085 gluconate 5-dehydroge  97.4 0.00048 1.2E-08   45.8   5.6  108  189-316     6-128 (254)
 47 PRK07533 enoyl-(acyl carrier p  97.3  0.0011 2.7E-08   43.6   7.3   34    1-38      2-38  (254)
 48 PRK08063 enoyl-(acyl carrier p  97.3 0.00088 2.2E-08   44.1   6.8  104  190-313     2-121 (250)
 49 PRK06196 oxidoreductase; Provi  97.3 0.00073 1.9E-08   44.6   6.3   77  189-281    23-110 (316)
 50 PRK07370 enoyl-(acyl carrier p  97.3 0.00053 1.4E-08   45.5   5.6   80  189-282     4-100 (259)
 51 PRK08936 glucose-1-dehydrogena  97.3   0.001 2.7E-08   43.6   6.8  100  189-309     4-120 (261)
 52 PRK05854 short chain dehydroge  97.3  0.0013 3.2E-08   43.1   7.0   39    2-45     11-50  (314)
 53 PRK07666 fabG 3-ketoacyl-(acyl  97.3  0.0014 3.7E-08   42.8   7.3  183  189-400     3-222 (238)
 54 TIGR03325 BphB_TodD cis-2,3-di  97.3  0.0014 3.5E-08   42.9   7.1   81  189-285     2-94  (262)
 55 PRK07984 enoyl-(acyl carrier p  97.2  0.0012 3.1E-08   43.3   6.7   31    3-37      4-37  (262)
 56 PRK12746 short chain dehydroge  97.2  0.0011 2.7E-08   43.6   6.3  188  189-398     3-234 (254)
 57 PRK06603 enoyl-(acyl carrier p  97.2 0.00057 1.5E-08   45.3   4.9   81  189-284     5-100 (260)
 58 PRK06077 fabG 3-ketoacyl-(acyl  97.2  0.0013 3.3E-08   43.0   6.7  107  190-316     1-123 (249)
 59 PRK12744 short chain dehydroge  97.2  0.0011 2.9E-08   43.4   6.3  112  187-318     3-133 (257)
 60 PRK09072 short chain dehydroge  97.2   0.002   5E-08   41.9   7.5   35    1-38      1-35  (262)
 61 PRK06197 short chain dehydroge  97.2  0.0016 4.1E-08   42.4   7.1   39    2-44     13-51  (306)
 62 PRK08415 enoyl-(acyl carrier p  97.2 0.00053 1.4E-08   45.5   4.5   35    1-39      1-38  (274)
 63 PRK06198 short chain dehydroge  97.2  0.0015 3.8E-08   42.6   6.8  121  189-330     3-143 (268)
 64 PRK06200 2,3-dihydroxy-2,3-dih  97.2  0.0019 4.9E-08   42.0   7.2   80  189-284     3-94  (263)
 65 PRK07231 fabG 3-ketoacyl-(acyl  97.2  0.0023 5.8E-08   41.5   7.5   78  189-282     3-93  (250)
 66 PRK07035 short chain dehydroge  97.2   0.002 5.1E-08   41.8   7.2   79  189-283     5-98  (252)
 67 PRK06124 gluconate 5-dehydroge  97.2   0.002 5.1E-08   41.8   7.2  162  188-373    10-205 (259)
 68 PRK12429 3-hydroxybutyrate deh  97.2  0.0015 3.9E-08   42.6   6.5   80  190-285     2-96  (258)
 69 PRK12742 oxidoreductase; Provi  97.1  0.0018 4.5E-08   42.2   6.7   81  189-285     3-90  (237)
 70 PRK07889 enoyl-(acyl carrier p  97.1  0.0023 5.8E-08   41.5   7.3   79  189-281     4-95  (256)
 71 PRK07067 sorbitol dehydrogenas  97.1  0.0025 6.3E-08   41.2   7.4  121  189-330     2-138 (256)
 72 PRK06484 short chain dehydroge  97.1  0.0096 2.5E-07   37.4  10.4  148  161-314   205-389 (530)
 73 PRK05867 short chain dehydroge  97.1  0.0018 4.7E-08   42.1   6.7  101  189-309     6-121 (253)
 74 PRK12823 benD 1,6-dihydroxycyc  97.1  0.0024 6.1E-08   41.3   7.2   79  189-283     5-97  (260)
 75 PRK05872 short chain dehydroge  97.1  0.0028 7.2E-08   40.9   7.6   82  188-285     5-98  (296)
 76 PRK08217 fabG 3-ketoacyl-(acyl  97.1  0.0025 6.4E-08   41.2   7.3   77  189-281     2-93  (253)
 77 PRK06841 short chain dehydroge  97.1  0.0027   7E-08   41.0   7.4  122  187-330    10-147 (255)
 78 PRK08264 short chain dehydroge  97.1  0.0042 1.1E-07   39.8   8.3   80  189-284     2-84  (235)
 79 PRK07774 short chain dehydroge  97.1  0.0025 6.4E-08   41.2   7.1   77  189-281     3-94  (250)
 80 PRK08993 2-deoxy-D-gluconate 3  97.1   0.002 5.2E-08   41.8   6.6   82  188-285     6-100 (253)
 81 PRK07060 short chain dehydroge  97.1  0.0023 5.9E-08   41.4   6.9  124  187-330     4-136 (245)
 82 COG1086 Predicted nucleoside-d  97.1  0.0079   2E-07   38.0   9.4  133  118-282   180-337 (588)
 83 PRK07814 short chain dehydroge  97.0  0.0026 6.7E-08   41.1   6.8  102  189-310     7-123 (263)
 84 PRK09186 flagellin modificatio  97.0   0.003 7.8E-08   40.7   7.1   77  189-281     1-93  (255)
 85 PRK08690 enoyl-(acyl carrier p  97.0  0.0026 6.7E-08   41.1   6.8   35  189-237     3-37  (261)
 86 PRK08628 short chain dehydroge  97.0  0.0027 6.9E-08   41.0   6.8   82  188-285     3-98  (258)
 87 PRK12827 short chain dehydroge  97.0  0.0028 7.2E-08   40.9   6.9  152  189-360     3-191 (251)
 88 PRK07825 short chain dehydroge  97.0   0.003 7.8E-08   40.7   7.0   81  189-285     2-93  (273)
 89 PRK06997 enoyl-(acyl carrier p  97.0  0.0036 9.1E-08   40.2   7.3   17  223-239   172-188 (260)
 90 PRK07523 gluconate 5-dehydroge  97.0  0.0042 1.1E-07   39.7   7.7  159  189-371     6-195 (251)
 91 PRK07776 consensus              97.0  0.0046 1.2E-07   39.5   7.8  160  188-370     4-194 (252)
 92 PRK07791 short chain dehydroge  97.0  0.0016 4.1E-08   42.4   5.4   81  189-285     3-107 (285)
 93 TIGR03206 benzo_BadH 2-hydroxy  97.0  0.0035 8.9E-08   40.3   7.0  119  190-330     1-138 (250)
 94 PRK13394 3-hydroxybutyrate deh  97.0  0.0032 8.2E-08   40.5   6.9  108  189-316     4-126 (262)
 95 PRK06346 consensus              97.0  0.0033 8.5E-08   40.4   6.9   78  189-282     2-94  (251)
 96 PRK12481 2-deoxy-D-gluconate 3  97.0  0.0032 8.2E-08   40.5   6.8  100  189-309     5-118 (251)
 97 PRK12829 short chain dehydroge  97.0  0.0046 1.2E-07   39.5   7.6  108  188-314     7-127 (264)
 98 PRK06701 short chain dehydroge  97.0  0.0028 7.1E-08   40.9   6.4  110  188-316    41-166 (289)
 99 PRK06114 short chain dehydroge  97.0  0.0037 9.4E-08   40.1   7.0  103  188-310    12-130 (262)
100 PRK08213 gluconate 5-dehydroge  97.0  0.0036 9.2E-08   40.2   6.9  107  189-315     9-130 (259)
101 PRK08261 fabG 3-ketoacyl-(acyl  97.0  0.0031 7.9E-08   40.6   6.5  109  176-285   169-296 (447)
102 PRK10675 UDP-galactose-4-epime  97.0  0.0052 1.3E-07   39.1   7.6   19   21-39     13-31  (338)
103 PRK12939 short chain dehydroge  96.9   0.004   1E-07   39.9   7.0  121  188-330     3-142 (250)
104 PRK06138 short chain dehydroge  96.9  0.0042 1.1E-07   39.8   7.1  102  189-310     2-117 (252)
105 PRK06079 enoyl-(acyl carrier p  96.9  0.0035   9E-08   40.2   6.7   36  189-238     4-39  (252)
106 PRK08226 short chain dehydroge  96.9  0.0045 1.1E-07   39.6   7.2   81  189-285     3-97  (263)
107 PRK06935 2-deoxy-D-gluconate 3  96.9   0.003 7.7E-08   40.7   6.3  106  189-314    12-131 (258)
108 PRK07097 gluconate 5-dehydroge  96.9  0.0046 1.2E-07   39.5   7.2  157  189-369     7-197 (265)
109 PRK09134 short chain dehydroge  96.9  0.0044 1.1E-07   39.6   7.1   81  189-285     6-102 (256)
110 PRK07677 short chain dehydroge  96.9   0.004   1E-07   39.9   6.8  105  190-314     1-120 (254)
111 PRK06463 fabG 3-ketoacyl-(acyl  96.9  0.0031 7.9E-08   40.6   6.2   82  188-285     3-94  (254)
112 PRK08642 fabG 3-ketoacyl-(acyl  96.9  0.0037 9.3E-08   40.1   6.6   76  189-280     3-92  (254)
113 PRK07041 short chain dehydroge  96.9  0.0059 1.5E-07   38.8   7.5   32    1-36      3-35  (240)
114 PRK06139 short chain dehydroge  96.9  0.0041 1.1E-07   39.8   6.7   36    1-39      1-37  (324)
115 PRK05717 oxidoreductase; Valid  96.9  0.0071 1.8E-07   38.3   7.9  109  188-315     6-127 (255)
116 PRK08263 short chain dehydroge  96.9  0.0049 1.2E-07   39.3   7.0   50  191-243   128-183 (275)
117 PRK12937 short chain dehydroge  96.9  0.0043 1.1E-07   39.7   6.7  122  189-330     2-139 (245)
118 PRK06949 short chain dehydroge  96.9  0.0029 7.4E-08   40.8   5.8   83  187-285     4-101 (258)
119 PRK08278 short chain dehydroge  96.9  0.0046 1.2E-07   39.5   6.8   34    1-38      2-36  (273)
120 PRK08862 short chain dehydroge  96.9  0.0056 1.4E-07   38.9   7.3   17  223-239   167-183 (227)
121 PRK05786 fabG 3-ketoacyl-(acyl  96.9   0.005 1.3E-07   39.2   7.0   33    1-37      1-34  (238)
122 PRK05876 short chain dehydroge  96.9  0.0041   1E-07   39.8   6.5   81  189-285     3-98  (275)
123 PRK07890 short chain dehydroge  96.8  0.0062 1.6E-07   38.7   7.3   33  190-238     3-35  (258)
124 PRK07326 short chain dehydroge  96.8  0.0055 1.4E-07   39.0   7.1   81  190-286     3-96  (235)
125 PRK07062 short chain dehydroge  96.8  0.0052 1.3E-07   39.2   6.9  108  187-314     3-127 (265)
126 KOG1201 consensus               96.8  0.0049 1.2E-07   39.3   6.7  190  179-401    25-256 (300)
127 PRK06125 short chain dehydroge  96.8  0.0069 1.8E-07   38.4   7.3   35  189-239     4-38  (259)
128 TIGR03466 HpnA hopanoid-associ  96.8  0.0021 5.3E-08   41.7   4.6   28   10-41      6-33  (328)
129 PRK06172 short chain dehydroge  96.8  0.0058 1.5E-07   38.8   6.9  103  188-309     3-120 (253)
130 PRK08324 short chain dehydroge  96.8   0.008   2E-07   38.0   7.6  109  186-314   415-537 (676)
131 PRK08265 short chain dehydroge  96.8  0.0078   2E-07   38.0   7.5   77  189-281     3-91  (261)
132 PRK07576 short chain dehydroge  96.8  0.0065 1.7E-07   38.5   7.1   20  219-238    19-38  (260)
133 PRK12935 acetoacetyl-CoA reduc  96.8  0.0055 1.4E-07   39.0   6.7   81  189-285     3-99  (247)
134 PRK08339 short chain dehydroge  96.8  0.0099 2.5E-07   37.4   7.9   33    1-37      4-37  (263)
135 PRK07063 short chain dehydroge  96.8   0.006 1.5E-07   38.8   6.8  106  189-314     4-125 (259)
136 PRK06057 short chain dehydroge  96.8  0.0078   2E-07   38.0   7.3   79  188-282     3-91  (255)
137 PRK06227 consensus              96.8  0.0064 1.6E-07   38.6   6.8  102  189-310     2-118 (256)
138 PRK07806 short chain dehydroge  96.7  0.0072 1.8E-07   38.3   7.1   18  222-239   165-182 (248)
139 PRK07109 short chain dehydroge  96.7  0.0076 1.9E-07   38.1   7.1   36    2-40      5-40  (338)
140 PRK08594 enoyl-(acyl carrier p  96.7  0.0082 2.1E-07   37.9   7.1   32    1-36      2-36  (256)
141 PRK08703 short chain dehydroge  96.7  0.0083 2.1E-07   37.8   7.1   76  189-280     3-97  (239)
142 PRK05875 short chain dehydroge  96.7  0.0083 2.1E-07   37.9   7.0   17  223-239   173-189 (277)
143 PRK07479 consensus              96.7  0.0084 2.1E-07   37.8   7.1   33  190-238     3-35  (252)
144 PRK06113 7-alpha-hydroxysteroi  96.7  0.0092 2.3E-07   37.6   7.2   84  186-285     5-103 (255)
145 PRK07478 short chain dehydroge  96.7  0.0077   2E-07   38.1   6.7   81  189-285     3-99  (254)
146 PRK06128 oxidoreductase; Provi  96.7  0.0073 1.9E-07   38.2   6.6  110  187-315    50-176 (300)
147 PRK08589 short chain dehydroge  96.6   0.011 2.7E-07   37.2   7.3   79  189-283     3-95  (272)
148 PRK12747 short chain dehydroge  96.6  0.0083 2.1E-07   37.9   6.6   79  190-284     2-102 (252)
149 PRK12936 3-ketoacyl-(acyl-carr  96.6   0.012   3E-07   36.9   7.4  107  189-315     3-121 (245)
150 PRK08303 short chain dehydroge  96.6  0.0053 1.4E-07   39.1   5.5   51  192-242   152-208 (305)
151 PRK06194 hypothetical protein;  96.6  0.0089 2.3E-07   37.7   6.5   33    2-38      3-36  (301)
152 PRK08277 D-mannonate oxidoredu  96.6   0.013 3.3E-07   36.6   7.2   75  189-279     7-96  (278)
153 PRK12748 3-ketoacyl-(acyl-carr  96.5   0.012   3E-07   36.8   6.8   17  223-239   180-196 (257)
154 PRK12938 acetyacetyl-CoA reduc  96.5   0.009 2.3E-07   37.6   6.2  158  190-369     1-191 (246)
155 PRK07832 short chain dehydroge  96.5   0.012 3.1E-07   36.8   6.8   78  193-286     1-94  (272)
156 PRK07775 short chain dehydroge  96.5   0.013 3.4E-07   36.5   7.0   21  219-239    21-41  (275)
157 PRK10217 dTDP-glucose 4,6-dehy  96.5   0.024 6.1E-07   34.9   8.1   30    6-39      2-32  (355)
158 PRK06182 short chain dehydroge  96.4   0.014 3.6E-07   36.4   6.9   48  192-242   126-179 (273)
159 PRK12859 3-ketoacyl-(acyl-carr  96.4   0.018 4.6E-07   35.7   7.3   83  189-285     3-111 (257)
160 PRK06720 hypothetical protein;  96.4   0.016   4E-07   36.1   7.0   83  186-284    10-107 (169)
161 PRK05855 short chain dehydroge  96.4   0.037 9.4E-07   33.7   8.8  168   91-285   202-407 (582)
162 PRK06300 enoyl-(acyl carrier p  96.4   0.029 7.3E-07   34.4   8.2   32    1-36      4-38  (298)
163 PRK07792 fabG 3-ketoacyl-(acyl  96.4   0.017 4.3E-07   35.9   7.0   45  192-239   145-194 (303)
164 PRK09135 pteridine reductase;   96.4   0.017 4.3E-07   35.9   7.0   81  189-285     3-100 (249)
165 PRK07985 oxidoreductase; Provi  96.4   0.017 4.2E-07   35.9   6.9   78  188-281    45-139 (294)
166 PRK08251 short chain dehydroge  96.3   0.017 4.3E-07   35.9   6.7   79  192-286     2-97  (248)
167 PRK06181 short chain dehydroge  96.3   0.018 4.7E-07   35.6   6.8   78  192-285     1-93  (263)
168 PRK06123 short chain dehydroge  96.2   0.023 5.9E-07   35.0   7.0  158  190-368     1-195 (249)
169 PRK12367 short chain dehydroge  96.2   0.023   6E-07   35.0   6.8   79  188-284    13-96  (250)
170 PRK06483 short chain dehydroge  96.2   0.019 4.9E-07   35.5   6.4   75  192-282     2-86  (236)
171 PRK07424 bifunctional sterol d  96.1   0.026 6.6E-07   34.7   6.7  185  173-401   166-374 (410)
172 cd01078 NAD_bind_H4MPT_DH NADP  96.1   0.032 8.1E-07   34.1   7.1   50  174-240    11-60  (194)
173 PRK08340 glucose-1-dehydrogena  96.1   0.029 7.4E-07   34.4   6.9   22  217-238     9-30  (259)
174 PRK10084 dTDP-glucose 4,6 dehy  96.1   0.041   1E-06   33.4   7.7   19   21-39     13-31  (352)
175 PRK12384 sorbitol-6-phosphate   96.0   0.029 7.5E-07   34.3   6.8   78  192-285     2-96  (259)
176 smart00822 PKS_KR This enzymat  96.0   0.027 6.9E-07   34.5   6.6   77  194-286     2-97  (180)
177 PRK06914 short chain dehydroge  96.0   0.032 8.3E-07   34.0   6.9   45  192-239   133-182 (280)
178 TIGR03589 PseB UDP-N-acetylglu  96.0   0.053 1.3E-06   32.7   7.8   35    3-41      2-38  (324)
179 pfam00106 adh_short short chai  95.9   0.039 9.9E-07   33.5   6.9   69  217-285     9-95  (167)
180 PRK06484 short chain dehydroge  95.9   0.056 1.4E-06   32.5   7.6   34    4-40      4-37  (530)
181 PRK06947 glucose-1-dehydrogena  95.9   0.044 1.1E-06   33.2   7.0   77  189-281     3-95  (252)
182 PRK07024 short chain dehydroge  95.8   0.052 1.3E-06   32.7   7.2   74  193-282     3-89  (256)
183 PRK06179 short chain dehydroge  95.8   0.053 1.4E-06   32.6   7.2   45  192-239   125-174 (270)
184 PRK11908 NAD-dependent epimera  95.7   0.065 1.7E-06   32.1   7.5   31    6-40      2-34  (347)
185 COG0451 WcaG Nucleoside-diphos  95.6   0.069 1.8E-06   31.9   7.3   31   10-41      3-33  (314)
186 pfam01370 Epimerase NAD depend  95.6   0.032 8.1E-07   34.1   5.4   97  216-321     6-108 (235)
187 pfam04321 RmlD_sub_bind RmlD s  95.5   0.052 1.3E-06   32.7   6.4   33   21-54     11-43  (284)
188 PRK07102 short chain dehydroge  95.5   0.079   2E-06   31.5   7.3   23  216-239    10-32  (243)
189 PRK08643 acetoin reductase; Va  95.5   0.063 1.6E-06   32.2   6.6   98  192-309     2-114 (256)
190 PRK12745 3-ketoacyl-(acyl-carr  95.5   0.066 1.7E-06   32.0   6.7   79  190-284     3-97  (259)
191 PRK07707 consensus              95.4   0.073 1.9E-06   31.8   6.6   21  218-238    12-32  (239)
192 PRK09291 short chain dehydroge  95.3   0.075 1.9E-06   31.7   6.6   49  191-242   124-178 (257)
193 PRK12743 acetoin dehydrogenase  95.3   0.082 2.1E-06   31.4   6.6   68  218-285    12-95  (253)
194 PRK08177 short chain dehydroge  95.2    0.11 2.8E-06   30.7   7.2   20  220-239    13-32  (225)
195 PRK08017 short chain dehydroge  95.2   0.058 1.5E-06   32.4   5.8   29  211-239   142-175 (256)
196 PRK07074 short chain dehydroge  95.1    0.14 3.4E-06   30.1   7.4   77  192-284     2-90  (256)
197 pfam02719 Polysacc_synt_2 Poly  95.1    0.19 4.8E-06   29.1   8.0   30   11-41      2-31  (280)
198 PRK07454 short chain dehydroge  94.9    0.12   3E-06   30.5   6.5   79  191-285     5-98  (241)
199 COG2910 Putative NADH-flavin r  94.8   0.067 1.7E-06   32.0   5.1  163  216-400     8-199 (211)
200 COG1028 FabG Dehydrogenases wi  94.8    0.19 4.9E-06   29.1   7.5   38    1-42      1-39  (251)
201 PRK12824 acetoacetyl-CoA reduc  94.8    0.11 2.9E-06   30.6   6.2  117  192-330     2-138 (245)
202 PRK05650 short chain dehydroge  94.8   0.095 2.4E-06   31.0   5.8   20  220-239    12-31  (270)
203 PRK01438 murD UDP-N-acetylmura  94.6    0.38 9.7E-06   27.2   8.7   73    2-90     11-86  (481)
204 PRK06180 short chain dehydroge  94.6    0.15 3.9E-06   29.7   6.5   49  191-242   129-183 (277)
205 PRK06101 short chain dehydroge  94.6    0.23 5.8E-06   28.6   7.4   18  222-239   153-170 (241)
206 pfam00208 ELFV_dehydrog Glutam  94.6    0.39   1E-05   27.1   8.6   46  189-251    29-75  (237)
207 cd01076 NAD_bind_1_Glu_DH NAD(  94.5    0.41   1E-05   27.0   9.2   47  188-251    27-74  (227)
208 PRK06482 short chain dehydroge  94.5    0.18 4.5E-06   29.3   6.6   46  191-239   127-177 (276)
209 PRK07904 short chain dehydroge  94.5    0.21 5.5E-06   28.8   7.0   14  220-233    20-33  (253)
210 PRK09730 hypothetical protein;  94.4    0.17 4.4E-06   29.4   6.5   65  217-281    10-90  (247)
211 TIGR01283 nifE nitrogenase MoF  94.4   0.071 1.8E-06   31.8   4.5   73  186-276   331-413 (470)
212 cd01076 NAD_bind_1_Glu_DH NAD(  94.4    0.15 3.8E-06   29.8   6.1  134    1-162    27-165 (227)
213 PRK06940 short chain dehydroge  94.3    0.17 4.3E-06   29.4   6.3   37    2-44      2-38  (277)
214 cd05313 NAD_bind_2_Glu_DH NAD(  94.3    0.26 6.7E-06   28.2   7.2   66  178-260    24-90  (254)
215 PRK11150 rfaD ADP-L-glycero-D-  94.3    0.28 7.1E-06   28.0   7.2   29   10-39      2-31  (308)
216 KOG1205 consensus               94.2    0.29 7.3E-06   28.0   7.2   28  122-149   116-146 (282)
217 PRK05993 short chain dehydroge  94.2    0.27   7E-06   28.1   7.1   49  191-242   127-181 (277)
218 KOG1210 consensus               94.2    0.16 4.2E-06   29.5   5.9   20  220-239   195-214 (331)
219 KOG1502 consensus               94.1   0.078   2E-06   31.6   4.2   34    9-43      8-41  (327)
220 PRK08220 2,3-dihydroxybenzoate  94.1    0.24 6.2E-06   28.4   6.8   34    1-38      4-38  (253)
221 PRK05693 short chain dehydroge  94.0    0.31 7.9E-06   27.7   7.0   46  191-239   122-172 (274)
222 COG0623 FabI Enoyl-[acyl-carri  93.9    0.29 7.3E-06   28.0   6.8   40    1-46      2-44  (259)
223 COG0300 DltE Short-chain dehyd  93.9    0.44 1.1E-05   26.7   7.7  187  189-400     3-226 (265)
224 KOG1371 consensus               93.8    0.23 5.8E-06   28.6   6.2   33    5-40      2-34  (343)
225 PRK10538 3-hydroxy acid dehydr  93.7    0.38 9.7E-06   27.2   7.1   63  220-282    12-86  (248)
226 cd05211 NAD_bind_Glu_Leu_Phe_V  93.6    0.59 1.5E-05   25.9   9.2   30    2-35     20-49  (217)
227 PRK09009 C factor cell-cell si  93.6    0.42 1.1E-05   26.9   7.1   71  194-281     2-78  (235)
228 CHL00194 ycf39 Ycf39; Provisio  93.5    0.46 1.2E-05   26.7   7.2  204    8-269     4-221 (319)
229 PRK08267 short chain dehydroge  93.5    0.37 9.4E-06   27.3   6.7   19  220-238    13-31  (258)
230 pfam00208 ELFV_dehydrog Glutam  93.5    0.27 6.9E-06   28.1   6.0  132    2-161    29-168 (237)
231 PRK04308 murD UDP-N-acetylmura  93.4    0.38 9.6E-06   27.2   6.7   36    1-41      1-37  (445)
232 PRK06924 short chain dehydroge  93.3    0.37 9.4E-06   27.2   6.5   44  193-239   135-183 (251)
233 TIGR03590 PseG pseudaminic aci  93.0    0.73 1.9E-05   25.3  11.0  225    7-285     2-257 (280)
234 PRK06718 precorrin-2 dehydroge  93.0    0.74 1.9E-05   25.3   9.6  158    1-182     6-180 (202)
235 PRK07023 short chain dehydroge  92.9    0.52 1.3E-05   26.3   6.8   20  220-239    13-32  (243)
236 COG1648 CysG Siroheme synthase  92.9    0.77   2E-05   25.2  11.0  157    2-182     9-183 (210)
237 PRK08219 short chain dehydroge  92.8    0.52 1.3E-05   26.3   6.6   78  191-285     2-85  (226)
238 TIGR02622 CDP_4_6_dhtase CDP-g  92.7    0.69 1.8E-05   25.5   7.2   34  190-239     2-35  (361)
239 PRK07453 protochlorophyllide o  92.7    0.44 1.1E-05   26.7   6.2   38    1-40      1-38  (322)
240 PRK00045 hemA glutamyl-tRNA re  92.7    0.46 1.2E-05   26.7   6.2  105  189-316   179-289 (429)
241 PRK07846 mycothione/glutathion  92.6    0.14 3.6E-06   30.0   3.5   77  162-243   106-202 (453)
242 PRK08978 acetolactate synthase  92.6    0.85 2.2E-05   24.9  16.9  153  172-353   355-520 (548)
243 PRK01747 mnmC 5-methylaminomet  92.5    0.73 1.9E-05   25.3   7.1   98  121-239   170-286 (660)
244 pfam00582 Usp Universal stress  92.2    0.95 2.4E-05   24.6   7.4  114    6-123     3-140 (140)
245 PRK07789 acetolactate synthase  92.1    0.96 2.5E-05   24.6  18.8  177  168-372   397-595 (612)
246 PRK06467 dihydrolipoamide dehy  92.1     0.2   5E-06   29.0   3.7   75  163-241   112-206 (472)
247 PRK06115 dihydrolipoamide dehy  92.1    0.29 7.3E-06   28.0   4.5   74  163-240   112-205 (466)
248 PRK07282 acetolactate synthase  92.0    0.99 2.5E-05   24.5  13.0  148  167-346   367-530 (566)
249 COG4221 Short-chain alcohol de  92.0    0.83 2.1E-05   25.0   6.8   73  209-282     8-93  (246)
250 PRK06416 dihydrolipoamide dehy  91.9    0.29 7.4E-06   27.9   4.4   74  163-241   111-204 (462)
251 PRK09987 dTDP-4-dehydrorhamnos  91.9    0.93 2.4E-05   24.7   7.0   17  216-232     8-24  (299)
252 pfam01488 Shikimate_DH Shikima  91.7    0.37 9.5E-06   27.2   4.8   76  189-287     9-92  (134)
253 pfam02882 THF_DHG_CYH_C Tetrah  91.6    0.99 2.5E-05   24.5   6.9   74  171-284    20-93  (159)
254 KOG4169 consensus               91.6    0.91 2.3E-05   24.7   6.7   79  189-283     2-96  (261)
255 PRK07069 short chain dehydroge  91.6    0.52 1.3E-05   26.3   5.4   99  217-319     8-128 (251)
256 pfam03446 NAD_binding_2 NAD bi  91.5    0.93 2.4E-05   24.6   6.7   22  217-238     9-30  (163)
257 PRK06370 mercuric reductase; V  91.5    0.22 5.6E-06   28.7   3.4   70  163-241   113-202 (459)
258 cd05212 NAD_bind_m-THF_DH_Cycl  91.4       1 2.5E-05   24.5   6.7   73  177-285    14-86  (140)
259 KOG0725 consensus               91.3    0.87 2.2E-05   24.9   6.3   35  189-239     5-39  (270)
260 pfam05368 NmrA NmrA-like famil  91.3    0.76 1.9E-05   25.2   6.0   30    8-41      2-31  (232)
261 PTZ00079 NADP-specific glutama  91.2     1.2   3E-05   24.0   7.1   54  185-255   245-299 (469)
262 pfam08659 KR KR domain. This e  91.2    0.68 1.7E-05   25.5   5.7   70  217-286     9-97  (181)
263 PRK03806 murD UDP-N-acetylmura  90.6    0.86 2.2E-05   24.9   5.7   70    2-91      3-75  (438)
264 PRK07525 sulfoacetaldehyde ace  90.5     1.4 3.5E-05   23.6  12.1  148  168-344   385-545 (589)
265 PRK12446 N-acetylglucosaminyl   90.5    0.37 9.3E-06   27.3   3.8   39    6-44      2-41  (352)
266 PRK00726 murG N-acetylglucosam  90.4    0.38 9.6E-06   27.2   3.8   38    6-43      2-40  (359)
267 COG1087 GalE UDP-glucose 4-epi  90.3     1.3 3.3E-05   23.8   6.4   30   10-40      3-32  (329)
268 TIGR01179 galE UDP-glucose 4-e  90.3    0.98 2.5E-05   24.5   5.8  231   10-272     2-287 (341)
269 PRK13940 glutamyl-tRNA reducta  90.2    0.95 2.4E-05   24.6   5.7   79  189-287   178-259 (414)
270 TIGR01777 yfcH conserved hypot  90.2    0.43 1.1E-05   26.8   4.0  110  216-331     6-126 (307)
271 COG0373 HemA Glutamyl-tRNA red  90.2    0.99 2.5E-05   24.5   5.8   99  164-287   155-255 (414)
272 TIGR02197 heptose_epim ADP-L-g  90.2    0.92 2.4E-05   24.7   5.6  114  189-314   184-313 (353)
273 PRK06953 short chain dehydroge  90.1     1.5 3.8E-05   23.3   7.0   14   23-36     16-29  (222)
274 pfam01073 3Beta_HSD 3-beta hyd  90.0     1.5 3.9E-05   23.2   6.8   19   21-39     10-30  (280)
275 COG1249 Lpd Pyruvate/2-oxoglut  89.6     1.3 3.3E-05   23.8   6.0   76  162-243   112-207 (454)
276 PRK02472 murD UDP-N-acetylmura  89.5     1.7 4.3E-05   23.0   6.8   75    3-91      7-82  (450)
277 COG0452 Dfp Phosphopantothenoy  89.4    0.53 1.4E-05   26.2   3.9   52  230-282   181-235 (392)
278 PRK02006 murD UDP-N-acetylmura  89.4    0.73 1.9E-05   25.4   4.6   75    2-91      4-79  (501)
279 TIGR01139 cysK cysteine syntha  89.3    0.61 1.6E-05   25.8   4.2  112   82-241    58-175 (312)
280 PRK05476 S-adenosyl-L-homocyst  89.3     1.7 4.4E-05   22.9   8.5  183    2-239    42-238 (427)
281 PRK07578 short chain dehydroge  89.3     1.7 4.4E-05   22.9   7.6   63  217-286     9-71  (199)
282 PRK06882 acetolactate synthase  89.3     1.7 4.4E-05   22.9  13.3  147  168-346   371-533 (574)
283 PRK05884 short chain dehydroge  89.2    0.73 1.9E-05   25.3   4.5   16   23-38     15-30  (223)
284 PRK06719 precorrin-2 dehydroge  89.2    0.69 1.8E-05   25.5   4.4   36    1-40      9-44  (157)
285 PRK00143 trmU tRNA (5-methylam  89.1    0.71 1.8E-05   25.4   4.4   33    3-39      2-35  (355)
286 TIGR01214 rmlD dTDP-4-dehydror  88.9    0.71 1.8E-05   25.4   4.3   66  216-282     7-72  (317)
287 COG3967 DltE Short-chain dehyd  88.8     1.5 3.8E-05   23.4   5.8   74  190-280     3-88  (245)
288 PRK07845 flavoprotein disulfid  88.5    0.29 7.3E-06   28.0   2.0   89  140-240    99-209 (467)
289 cd03785 GT1_MurG MurG is an N-  88.4    0.53 1.4E-05   26.2   3.3   37    7-43      1-38  (350)
290 PRK06965 acetolactate synthase  88.3       2 5.2E-05   22.5  10.7  159  165-351   384-555 (587)
291 COG2072 TrkA Predicted flavopr  88.2    0.42 1.1E-05   26.9   2.7   68  160-244   140-210 (443)
292 COG1091 RfbD dTDP-4-dehydrorha  88.2       1 2.7E-05   24.3   4.7   38    9-52      5-42  (281)
293 PRK05249 soluble pyridine nucl  87.9       1 2.6E-05   24.4   4.5   75  163-241   114-208 (465)
294 KOG1208 consensus               87.6     2.2 5.7E-05   22.2   7.6   21  219-239    46-66  (314)
295 PRK10637 cysG siroheme synthas  87.3     2.3 5.9E-05   22.1   9.7  134    1-158     8-155 (457)
296 TIGR03457 sulphoacet_xsc sulfo  87.2     2.3   6E-05   22.1  11.2   60  208-277   420-483 (579)
297 PRK06154 hypothetical protein;  87.2     2.4   6E-05   22.1  10.3  146  169-346   372-531 (556)
298 cd00950 DHDPS Dihydrodipicolin  87.0     2.4 6.2E-05   22.0  14.5  177  118-353     6-182 (284)
299 cd01080 NAD_bind_m-THF_DH_Cycl  86.9     2.4 6.2E-05   22.0   6.9   76  169-284    26-101 (168)
300 TIGR01963 PHB_DH 3-hydroxybuty  86.7     2.5 6.3E-05   21.9   7.0   69  131-202   187-256 (258)
301 PRK03170 dihydrodipicolinate s  86.6     2.5 6.5E-05   21.9  14.7  176  120-354     9-184 (292)
302 COG1090 Predicted nucleoside-d  86.5    0.83 2.1E-05   25.0   3.4   23   21-44     11-33  (297)
303 pfam03358 FMN_red NADPH-depend  86.5       2 5.1E-05   22.5   5.4   84  194-287     2-85  (147)
304 PRK07418 acetolactate synthase  86.5     2.6 6.5E-05   21.8  12.2  158  169-358   387-559 (615)
305 PRK12320 hypothetical protein;  86.1     2.7 6.8E-05   21.7   6.3   37   10-47      3-45  (699)
306 PRK08010 pyridine nucleotide-d  85.9    0.59 1.5E-05   25.9   2.4   74  163-241    96-190 (441)
307 cd03818 GT1_ExpC_like This fam  85.8     2.1 5.2E-05   22.4   5.1   32   10-42      3-34  (396)
308 PRK03369 murD UDP-N-acetylmura  85.7    0.89 2.3E-05   24.8   3.3   33    3-41     10-44  (487)
309 PRK10422 lipopolysaccharide co  85.4     2.9 7.4E-05   21.5  18.1  204    1-243     1-226 (352)
310 PRK13748 putative mercuric red  85.4     1.7 4.2E-05   23.0   4.5   75  163-241   208-302 (561)
311 PRK08527 acetolactate synthase  85.4     2.9 7.4E-05   21.5  14.7  158  167-354   364-535 (560)
312 cd03808 GT1_cap1E_like This fa  85.2       2 5.1E-05   22.5   4.9   35    7-42      1-37  (359)
313 PRK08655 prephenate dehydrogen  85.2       1 2.6E-05   24.5   3.3   78    9-105     5-85  (441)
314 cd03784 GT1_Gtf_like This fami  85.1    0.89 2.3E-05   24.8   3.0   41    7-47      2-43  (401)
315 KOG1014 consensus               85.1     2.4   6E-05   22.0   5.2   99  216-316    57-170 (312)
316 PRK00421 murC UDP-N-acetylmura  84.9       2 5.2E-05   22.5   4.8   72    2-92      5-78  (459)
317 TIGR03452 mycothione_red mycot  84.9       2 5.1E-05   22.5   4.7   74  162-243   110-203 (452)
318 PRK07168 bifunctional uroporph  84.8     3.1 7.9E-05   21.3  11.8  218    3-279    78-309 (474)
319 PRK06129 3-hydroxyacyl-CoA deh  84.7     1.3 3.4E-05   23.7   3.7   32    6-41      3-34  (308)
320 pfam03807 F420_oxidored NADP o  84.5    0.49 1.2E-05   26.5   1.5   26  216-241     6-31  (93)
321 pfam05221 AdoHcyase S-adenosyl  84.5     3.2 8.1E-05   21.2  11.6  182    2-239    40-240 (430)
322 PRK05976 dihydrolipoamide dehy  84.2     1.8 4.5E-05   22.8   4.2   73  163-240   114-206 (464)
323 PRK01710 murD UDP-N-acetylmura  83.7     3.4 8.7E-05   21.0   6.9   74    3-90     12-86  (458)
324 TIGR01983 UbiG ubiquinone bios  83.6     1.3 3.3E-05   23.8   3.3   39  164-208   224-262 (275)
325 COG0482 TrmU Predicted tRNA(5-  83.4     2.3   6E-05   22.1   4.6   36    4-42      2-37  (356)
326 cd03132 GATase1_catalase Type   83.3     3.3 8.5E-05   21.1   5.3  102    5-123     1-102 (142)
327 PRK07979 acetolactate synthase  83.2     3.6 9.2E-05   20.9  15.5  155  168-350   371-538 (574)
328 TIGR01136 cysKM cysteine synth  83.1     1.1 2.8E-05   24.2   2.8   56   82-154    61-118 (315)
329 cd05213 NAD_bind_Glutamyl_tRNA  83.1     3.6 9.2E-05   20.9  10.1  105  189-318   175-284 (311)
330 PRK10660 tilS tRNA(Ile)-lysidi  83.0     3.6 9.1E-05   20.9   5.4   39    1-39      9-49  (433)
331 COG1797 CobB Cobyrinic acid a,  82.7     2.3 5.8E-05   22.1   4.3   81    6-89      1-86  (451)
332 PRK07092 benzoylformate decarb  82.6     3.8 9.7E-05   20.7   7.9   11  230-240   261-271 (521)
333 pfam01210 NAD_Gly3P_dh_N NAD-d  82.5     3.7 9.3E-05   20.8   5.3   25  215-239     6-30  (159)
334 PRK06912 acoL dihydrolipoamide  82.2     3.2 8.1E-05   21.2   4.9   74  163-241   109-202 (458)
335 PRK13896 cobyrinic acid a,c-di  81.2     2.5 6.4E-05   21.9   4.0   55    6-62      2-58  (432)
336 PRK06292 dihydrolipoamide dehy  81.1     4.3 0.00011   20.4   5.3   52  189-240   128-200 (460)
337 pfam03054 tRNA_Me_trans tRNA m  81.1     2.3 5.8E-05   22.2   3.8   29    7-39      2-31  (354)
338 TIGR01289 LPOR light-dependent  81.0     4.3 0.00011   20.4   5.9   71  210-281     6-92  (321)
339 TIGR00420 trmU tRNA (5-methyla  81.0     2.6 6.7E-05   21.8   4.1   29    6-41      1-33  (394)
340 PRK09414 glutamate dehydrogena  80.5     4.5 0.00011   20.3   9.8   53  186-255   223-276 (446)
341 PRK06835 DNA replication prote  80.5       2   5E-05   22.6   3.3   73  212-287   189-267 (330)
342 PRK08268 3-hydroxybutyryl-CoA   80.0     2.6 6.7E-05   21.7   3.8   32    6-41      4-35  (503)
343 KOG1209 consensus               79.8     4.7 0.00012   20.1   5.4   18   21-38     21-38  (289)
344 TIGR01832 kduD 2-deoxy-D-gluco  79.8     3.7 9.4E-05   20.8   4.5   62  217-284   159-235 (249)
345 PRK06130 3-hydroxybutyryl-CoA   79.7     2.7   7E-05   21.6   3.8   37    1-41      1-37  (310)
346 PRK08306 dipicolinate synthase  79.5     2.2 5.7E-05   22.2   3.3  143  186-404   146-292 (296)
347 PRK05134 3-demethylubiquinone-  79.2     2.7 6.8E-05   21.7   3.6   31  189-239    46-77  (233)
348 PRK06327 dihydrolipoamide dehy  79.0     4.6 0.00012   20.2   4.8   52  189-240   143-214 (475)
349 TIGR00872 gnd_rel 6-phosphoglu  78.8     1.3 3.2E-05   23.8   1.9  131   23-183    15-152 (341)
350 COG1819 Glycosyl transferases,  78.6     5.1 0.00013   19.9   5.0   46    6-51      2-48  (406)
351 PRK09496 trkA potassium transp  78.6     2.3 5.8E-05   22.2   3.1   62  214-277   237-304 (455)
352 PRK08293 3-hydroxybutyryl-CoA   78.5     3.1 7.9E-05   21.3   3.8   33    5-41      3-35  (288)
353 PRK06035 3-hydroxyacyl-CoA deh  78.5     3.1 7.9E-05   21.3   3.8   32    6-41      4-35  (291)
354 PRK07530 3-hydroxybutyryl-CoA   78.3     3.1 7.9E-05   21.3   3.8   33    5-41      4-36  (292)
355 PRK10799 putative hydrolase-ox  78.3     5.2 0.00013   19.8   5.0  113  122-255    93-213 (247)
356 cd01075 NAD_bind_Leu_Phe_Val_D  78.2     5.3 0.00013   19.8   8.9   20  217-236    36-55  (200)
357 cd00401 AdoHcyase S-adenosyl-L  78.0     5.4 0.00014   19.8  12.2  183    2-239    33-232 (413)
358 PRK01390 murD UDP-N-acetylmura  78.0     4.7 0.00012   20.1   4.6   33    2-39      6-39  (457)
359 PRK07819 3-hydroxybutyryl-CoA   77.9     3.3 8.5E-05   21.1   3.8   33    6-42      3-35  (284)
360 PRK09117 consensus              77.9     3.4 8.7E-05   21.0   3.8   32    6-41      3-34  (282)
361 PRK08322 acetolactate synthase  77.8     5.4 0.00014   19.7  11.2   10  231-240   261-270 (547)
362 cd06451 AGAT_like Alanine-glyo  77.8     5.4 0.00014   19.7   5.4   20  382-402   336-355 (356)
363 PRK07660 consensus              77.7     3.3 8.4E-05   21.1   3.7   34    4-41      2-35  (283)
364 cd01998 tRNA_Me_trans tRNA met  77.5     3.2 8.1E-05   21.2   3.6   29    7-39      1-30  (349)
365 PRK05562 precorrin-2 dehydroge  77.3     5.3 0.00014   19.8   4.7  152    2-180    19-191 (222)
366 PRK04690 murD UDP-N-acetylmura  76.5     5.9 0.00015   19.5   6.2   72    2-90      5-78  (468)
367 PRK05808 3-hydroxybutyryl-CoA   76.0       4  0.0001   20.6   3.8   34    5-42      3-36  (282)
368 PRK00094 gpsA NAD(P)H-dependen  76.0     6.1 0.00016   19.4   4.9   32    7-42      3-34  (325)
369 TIGR03249 KdgD 5-dehydro-4-deo  75.7     6.2 0.00016   19.4   9.5  176  119-356    12-187 (296)
370 pfam07993 NAD_binding_4 Male s  75.7     6.2 0.00016   19.4   6.5   25   11-39      3-29  (245)
371 pfam02737 3HCDH_N 3-hydroxyacy  75.2     3.3 8.4E-05   21.1   3.2   26  215-240     5-30  (180)
372 TIGR01035 hemA glutamyl-tRNA r  75.2     6.4 0.00016   19.3   6.4  145  189-359   182-344 (436)
373 TIGR02536 eut_hyp ethanolamine  75.1     4.6 0.00012   20.2   3.9  101   79-181    58-176 (248)
374 TIGR01830 3oxo_ACP_reduc 3-oxo  74.9     6.5 0.00016   19.2   5.1  150  216-371     6-187 (238)
375 LOAD_USPA consensus             74.9     6.5 0.00017   19.2   6.2   33    6-38      1-34  (135)
376 PRK06116 glutathione reductase  74.8     6.5 0.00017   19.2   5.9   71  162-241   111-199 (450)
377 COG1908 FrhD Coenzyme F420-red  74.8     6.5 0.00017   19.2   6.2   87  198-285    18-111 (132)
378 TIGR02525 plasmid_TraJ plasmid  74.5     3.7 9.4E-05   20.8   3.3   41  160-215   155-195 (374)
379 COG0329 DapA Dihydrodipicolina  74.1     6.8 0.00017   19.1  13.6  182  118-357    10-191 (299)
380 cd00952 CHBPH_aldolase Trans-o  74.1     6.8 0.00017   19.1  14.0  156  130-344    26-182 (309)
381 PRK12831 putative oxidoreducta  74.1     6.8 0.00017   19.1   5.2   42  190-248   279-320 (464)
382 PRK06526 transposase; Provisio  73.9     4.2 0.00011   20.5   3.5   31  211-241   103-135 (254)
383 pfam00201 UDPGT UDP-glucoronos  73.8     6.9 0.00018   19.1   4.8   36    5-41      1-36  (501)
384 KOG1429 consensus               73.7     6.4 0.00016   19.3   4.3   33    3-38     25-57  (350)
385 pfam05025 RbsD_FucU RbsD / Fuc  73.4       7 0.00018   19.0   5.2   67  217-283     4-76  (137)
386 COG1004 Ugd Predicted UDP-gluc  73.2     7.1 0.00018   19.0   5.8  199    7-239     2-238 (414)
387 cd03814 GT1_like_2 This family  73.2     7.1 0.00018   19.0   5.0   36    7-43      1-42  (364)
388 PRK12409 D-amino acid dehydrog  72.6     4.1 0.00011   20.5   3.2   18  218-235   197-214 (410)
389 PRK05599 hypothetical protein;  72.3     7.5 0.00019   18.8   6.4   68  213-282     6-89  (246)
390 PRK00141 murD UDP-N-acetylmura  72.2     7.5 0.00019   18.8   4.7   70    3-90     16-85  (476)
391 PRK07251 pyridine nucleotide-d  72.1     3.4 8.8E-05   21.0   2.7   88  137-241    81-189 (438)
392 PRK11199 tyrA bifunctional cho  71.9     7.6 0.00019   18.8   5.7  138  191-356    97-242 (374)
393 PRK10792 bifunctional 5,10-met  71.8     7.7  0.0002   18.8   6.1   74  171-284   143-216 (288)
394 PRK09260 3-hydroxybutyryl-CoA   71.7     5.8 0.00015   19.6   3.7   32    6-41      3-34  (289)
395 PRK05370 argininosuccinate syn  71.6     7.7  0.0002   18.7   4.8   38    4-44     10-47  (447)
396 COG0499 SAM1 S-adenosylhomocys  71.4     7.8  0.0002   18.7  11.3  182    2-239    42-239 (420)
397 COG3660 Predicted nucleoside-d  71.4     7.8  0.0002   18.7   8.7  115   20-156    16-137 (329)
398 PRK07066 3-hydroxybutyryl-CoA   71.3       6 0.00015   19.5   3.7   31    6-40      8-38  (321)
399 PRK12769 putative oxidoreducta  71.1     7.9  0.0002   18.7   4.6   22  217-238   335-356 (654)
400 pfam01121 CoaE Dephospho-CoA k  71.1     2.9 7.4E-05   21.5   2.1   27    8-35      1-27  (179)
401 COG0569 TrkA K+ transport syst  71.0     4.5 0.00011   20.3   3.0  178    6-240     1-182 (225)
402 cd01134 V_A-ATPase_A V/A-type   70.9     5.7 0.00015   19.6   3.6   27  216-242   237-263 (369)
403 cd03802 GT1_AviGT4_like This f  70.6     8.1 0.00021   18.6   5.0   35    7-42      2-46  (335)
404 PRK07710 acetolactate synthase  70.6     8.2 0.00021   18.6  13.2  157  169-357   375-547 (571)
405 COG0289 DapB Dihydrodipicolina  70.4     8.2 0.00021   18.6   4.3   14  134-147    81-94  (266)
406 TIGR03301 PhnW-AepZ 2-aminoeth  70.4     8.2 0.00021   18.6   6.3   80  164-253   106-198 (355)
407 cd00293 USP_Like Usp: Universa  70.4     8.2 0.00021   18.6   4.9   18    7-24      1-18  (130)
408 TIGR03394 indol_phenyl_DC indo  70.3     8.2 0.00021   18.6  11.3   24    5-32     14-37  (535)
409 TIGR01578 MiaB-like-B MiaB-lik  70.2     8.3 0.00021   18.5   5.0  187  134-361   132-340 (487)
410 PRK09754 phenylpropionate diox  70.0     6.2 0.00016   19.3   3.6   33  191-240   143-175 (400)
411 cd00951 KDGDH 5-dehydro-4-deox  69.8     8.5 0.00022   18.5   9.2  176  120-357     8-183 (289)
412 COG4081 Uncharacterized protei  69.5     8.4 0.00021   18.5   4.2   27   21-47     21-47  (148)
413 cd03791 GT1_Glycogen_synthase_  69.4     7.6 0.00019   18.8   3.9   27   13-40     15-41  (476)
414 TIGR02415 23BDH acetoin reduct  69.2     7.9  0.0002   18.7   4.0   69  125-200   186-254 (258)
415 pfam03033 Glyco_transf_28 Glyc  69.2     3.8 9.7E-05   20.7   2.4   31  195-237     1-31  (136)
416 PRK01077 cobyrinic acid a,c-di  69.2     8.7 0.00022   18.4   4.4   84    5-90      3-90  (451)
417 COG5157 CDC73 RNA polymerase I  69.2     4.4 0.00011   20.3   2.7   79  114-213   202-284 (362)
418 COG0031 CysK Cysteine synthase  68.8     7.7  0.0002   18.7   3.9  132   83-240    62-202 (300)
419 PRK04965 nitric oxide reductas  68.7     6.4 0.00016   19.3   3.4   33  191-240   140-172 (378)
420 COG3980 spsG Spore coat polysa  68.6       9 0.00023   18.3  14.6  241    7-310     2-258 (318)
421 PRK05038 consensus              68.5       9 0.00023   18.3   6.0   19  216-234   224-242 (315)
422 PRK13943 protein-L-isoaspartat  68.5       9 0.00023   18.3   4.8   93  227-346   119-225 (317)
423 cd03821 GT1_Bme6_like This fam  68.3     9.1 0.00023   18.3   4.9   35    7-42      1-41  (375)
424 PRK07818 dihydrolipoamide dehy  68.3       4  0.0001   20.6   2.3   74  163-240   111-203 (467)
425 pfam00070 Pyr_redox Pyridine n  68.1     5.7 0.00015   19.6   3.1   28  216-243     6-33  (82)
426 cd04962 GT1_like_5 This family  67.9     9.3 0.00024   18.2   5.1   34    7-42      2-39  (371)
427 PRK05752 uroporphyrinogen-III   67.7     9.3 0.00024   18.2   7.3  158    3-241     1-162 (255)
428 TIGR03449 mycothiol_MshA UDP-N  67.7       8  0.0002   18.7   3.7   32    8-40     14-45  (405)
429 COG0771 MurD UDP-N-acetylmuram  67.7     5.7 0.00014   19.6   3.0  192    3-239     5-219 (448)
430 PRK00081 coaE dephospho-CoA ki  67.6     4.7 0.00012   20.1   2.6   28    8-36      3-30  (199)
431 CHL00099 ilvB acetohydroxyacid  67.6     9.4 0.00024   18.2  11.4  162  167-358   377-551 (588)
432 pfam00701 DHDPS Dihydrodipicol  67.3     9.5 0.00024   18.2  10.0  179  118-355     7-185 (289)
433 KOG1221 consensus               67.0     9.7 0.00025   18.1   4.8  102    3-108    10-133 (467)
434 TIGR03026 NDP-sugDHase nucleot  66.5     9.9 0.00025   18.1   6.6   36  322-357   314-355 (411)
435 PRK00654 glgA glycogen synthas  66.4     9.4 0.00024   18.2   3.9   27   13-40     16-42  (476)
436 pfam01266 DAO FAD dependent ox  66.1       7 0.00018   19.0   3.2   53  218-280   147-200 (309)
437 PRK10307 predicted glycosyl tr  66.0      10 0.00026   18.0   5.1   33    7-40      2-40  (415)
438 PRK00711 D-amino acid dehydrog  65.8     6.9 0.00018   19.1   3.1   68  200-280   188-255 (416)
439 TIGR02788 VirB11 P-type DNA tr  65.7     1.7 4.4E-05   23.0   0.0  145  101-269    61-234 (328)
440 PRK05225 ketol-acid reductoiso  65.3      10 0.00026   17.9   4.7   69    3-88     35-105 (489)
441 PTZ00052 thioredoxin reductase  65.2     4.7 0.00012   20.1   2.2   76  163-240   158-253 (541)
442 cd03800 GT1_Sucrose_synthase T  65.2     9.5 0.00024   18.2   3.7   26   13-39     20-45  (398)
443 PRK11730 fadB multifunctional   64.9     9.1 0.00023   18.3   3.6   37  204-240   308-344 (715)
444 cd03817 GT1_UGDG_like This fam  64.7      11 0.00027   17.8   4.8   28   14-42     14-41  (374)
445 cd01988 Na_H_Antiporter_C The   64.7      11 0.00027   17.8   5.4   29    7-35      1-30  (132)
446 PRK11761 cysM cysteine synthas  64.6     6.8 0.00017   19.1   2.9   50   84-150    64-113 (296)
447 TIGR02853 spore_dpaA dipicolin  64.5     5.6 0.00014   19.7   2.4  102  217-356   160-264 (288)
448 PRK05439 pantothenate kinase;   64.5     7.1 0.00018   19.0   3.0   26  215-240    95-124 (312)
449 PRK01184 hypothetical protein;  64.5       6 0.00015   19.4   2.6   27    9-36      3-29  (183)
450 PTZ00300 pyruvate kinase; Prov  64.3      11 0.00028   17.8  10.9   71  301-374   372-451 (454)
451 TIGR01426 MGT glycosyltransfer  64.2       5 0.00013   20.0   2.1   23   21-43     12-34  (429)
452 PRK06975 bifunctional uroporph  64.1      11 0.00028   17.8   6.9   35  189-240   136-170 (653)
453 PRK06354 pyruvate kinase; Prov  64.1      11 0.00028   17.8   9.4   18  116-133   276-293 (589)
454 cd06192 DHOD_e_trans_like FAD/  63.9      11 0.00028   17.7   7.0   37  192-243    97-134 (243)
455 PRK00805 putative deoxyhypusin  63.7      11 0.00028   17.7   5.9   54    4-61     52-105 (338)
456 pfam01175 Urocanase Urocanase.  63.5     8.9 0.00023   18.4   3.3  136  111-262    70-277 (545)
457 PRK02705 murD UDP-N-acetylmura  63.5     7.3 0.00019   18.9   2.9   63   24-90     15-77  (459)
458 PRK05414 urocanate hydratase;   63.4     8.8 0.00022   18.4   3.3  122  111-248    81-271 (558)
459 PRK09183 transposase/IS protei  63.3      11 0.00027   17.8   3.7   33  209-241   104-138 (258)
460 pfam03853 YjeF_N YjeF-related   63.2      11 0.00029   17.7   6.4   38  190-240    26-63  (170)
461 TIGR02279 PaaC-3OHAcCoADH 3-hy  63.1     4.7 0.00012   20.1   1.9   23   82-104   112-134 (508)
462 PRK03971 putative deoxyhypusin  62.8      10 0.00026   17.9   3.6   38    6-44     67-104 (334)
463 cd03794 GT1_wbuB_like This fam  62.7      12  0.0003   17.6   4.8   27   14-41     14-40  (394)
464 PRK04527 argininosuccinate syn  62.5      12  0.0003   17.6   4.7   38    3-43      1-38  (397)
465 PRK06019 phosphoribosylaminoim  62.3      12  0.0003   17.6   4.8  148    3-179     5-171 (377)
466 PRK03333 coaE dephospho-CoA ki  62.2     7.5 0.00019   18.8   2.8   38    8-48      2-40  (394)
467 COG2945 Predicted hydrolase of  62.1      12  0.0003   17.5   4.1   79  100-179    10-96  (210)
468 PRK00054 dihydroorotate dehydr  61.9      12 0.00031   17.5   6.1   37  192-243   100-137 (248)
469 COG1157 FliI Flagellar biosynt  61.9      12 0.00031   17.5   4.0  137   85-241    95-261 (441)
470 PRK13479 2-aminoethylphosphona  61.8      12 0.00031   17.5  11.4   32  139-179    96-127 (368)
471 PRK00048 dihydrodipicolinate r  61.5      12 0.00031   17.5   5.2   16  134-149    81-96  (265)
472 TIGR03649 ergot_EASG ergot alk  61.4      12 0.00031   17.5   3.8   31    9-43      4-34  (285)
473 TIGR01584 citF citrate lyase,   61.3      12  0.0003   17.5   3.7  130  192-354   130-285 (496)
474 pfam06258 DUF1022 Protein of u  61.3      12 0.00031   17.5  11.2  128  190-349   141-273 (308)
475 TIGR01043 ATP_syn_A_arch ATP s  61.2     5.4 0.00014   19.8   1.9  225  131-400   237-502 (584)
476 PRK07591 threonine synthase; V  61.1      12 0.00032   17.4   4.1   50   85-151   141-190 (422)
477 PRK03620 5-dehydro-4-deoxygluc  60.9      12 0.00032   17.4  14.7  174  121-356    10-183 (296)
478 PRK07531 bifunctional 3-hydrox  60.8      12  0.0003   17.5   3.6   38    6-47      3-41  (489)
479 cd04955 GT1_like_6 This family  60.8      13 0.00032   17.4   4.8   34    7-41      1-41  (363)
480 pfam08323 Glyco_transf_5 Starc  60.6      13 0.00032   17.4   3.9   31   11-42     12-42  (229)
481 pfam05179 CDC73 RNA pol II acc  60.5     7.2 0.00018   19.0   2.4   38  115-157   115-152 (273)
482 TIGR01138 cysM cysteine syntha  60.2     8.7 0.00022   18.4   2.8   55   85-156    64-120 (300)
483 TIGR02685 pter_reduc_Leis pter  60.1      13 0.00033   17.3   5.4   67  219-287    12-112 (283)
484 PRK09564 coenzyme A disulfide   60.1      13 0.00033   17.3   4.6   34  191-241   148-181 (443)
485 pfam10727 Rossmann-like Rossma  60.1      12 0.00032   17.4   3.6   27  216-242     4-30  (111)
486 PRK08192 aspartate carbamoyltr  60.1      13 0.00033   17.3   7.3   58    1-60      1-74  (338)
487 PRK07667 uridine kinase; Provi  60.0      13 0.00032   17.4   3.6   39    4-42     11-52  (190)
488 TIGR03364 HpnW_proposed FAD de  59.9      10 0.00026   17.9   3.1   27   10-39      4-30  (365)
489 PRK11797 D-ribose pyranase; Pr  59.8      13 0.00033   17.3   3.6   58  217-274     4-67  (138)
490 pfam01916 DS Deoxyhypusine syn  59.6      13 0.00033   17.3   4.2   49    5-56     37-85  (297)
491 PRK05480 uridine kinase; Provi  59.4      13 0.00034   17.2   6.3   26    4-30      3-28  (209)
492 PRK11559 garR tartronate semia  59.2     9.8 0.00025   18.1   2.9  120    7-156     3-124 (295)
493 cd02022 DPCK Dephospho-coenzym  59.1     6.2 0.00016   19.4   1.9   26    9-35      1-26  (179)
494 PRK09954 hypothetical protein;  59.0      13 0.00034   17.2   6.4   28  213-240    88-115 (362)
495 PRK07952 DNA replication prote  59.0      13 0.00034   17.2   3.9   34  208-241    98-133 (242)
496 pfam00205 TPP_enzyme_M Thiamin  58.5      11 0.00027   17.8   3.0   11   81-91     77-87  (138)
497 COG0143 MetG Methionyl-tRNA sy  58.5      12  0.0003   17.6   3.2   24   14-37     23-47  (558)
498 PRK01259 ribose-phosphate pyro  58.3      14 0.00035   17.1   7.1   19  216-234   219-237 (309)
499 PRK01221 putative deoxyhypusin  58.3      14 0.00035   17.1   5.7   53    5-61     54-106 (312)
500 COG0621 MiaB 2-methylthioadeni  57.9      14 0.00036   17.1   6.3  155  164-352   168-329 (437)

No 1  
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=100.00  E-value=0  Score=992.06  Aligned_cols=402  Identities=50%  Similarity=0.800  Sum_probs=383.9

Q ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98885569999528478999999999999879889998585686306989999974797582076788778774300114
Q gi|254780622|r    1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLAN   80 (405)
Q Consensus         1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~   80 (405)
                      |.|+||||||||||||||||+++|+|+|+++|++|+||||++|++||+|++|+++|+|+||+|+|+...+.+++||+|++
T Consensus        67 ~~l~GKkIlLgVtGsIAAYKa~~LvR~L~k~Ga~V~vvmT~~A~~FVtplt~~~ls~~~V~tdl~~~~~~~~~~HI~La~  146 (476)
T PRK13982         67 ASLGSKRITLIIGGGIAAYKALDLIRRLKERGAEVRCVLTKAAQQFVTPLTASALSGQRVYTDLFDPESEFDAGHIRLAR  146 (476)
T ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHH
T ss_conf             68889979999674899999999999999789989999787786341899999983997770267876567776514414


Q ss_pred             CCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
Q ss_conf             46557884111888988520245521466675227996898405660000038899999998640001346521255310
Q gi|254780622|r   81 ECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAES  160 (405)
Q Consensus        81 ~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c  160 (405)
                      |+|++||||||||||+|+|+||||||+|+++|++ ++|+++|||||++||+||+||+|+++|+++|++|++|..|.||+|
T Consensus       147 ~ADlilVAPATAN~IaK~A~GiADdllst~~LA~-~~pvliaPAMN~~Mw~npatq~Ni~~L~~~G~~ii~P~~G~lA~c  225 (476)
T PRK13982        147 DCDLIVVAPATADLMAKMANGLADDLASAILLAA-NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNAGEMAER  225 (476)
T ss_pred             HCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHC-CCCEEEEECCCHHHHHCHHHHHHHHHHHCCCCEECCCCCCCHHCC
T ss_conf             4499998238999999997566556999999865-997799958299988699999999998614988458866601204


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             32233343455899999998631013200179778984042010102135762157727889999999825883899841
Q gi|254780622|r  161 NGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       161 ~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      |++|.|||+||++|+.++.+++....+.+|+|||||||+|||+|||||||||||+||||||++||++|+.+||+||||+|
T Consensus       226 ge~G~GRl~ep~~Iv~~i~~~l~~~~~~~L~GkkVLITAGpT~E~IDPVR~IsN~SSGKmG~aiA~aa~~rGA~VtLIsG  305 (476)
T PRK13982        226 GEAGVGRMAEPLEIAAAAEALLRPPQPKPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISG  305 (476)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             66577889999999999999872145555679889996688712226745577668519999999999967997999956


Q ss_pred             CCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCC
Q ss_conf             56677656746754657789999998505888799740444443222210112334557751045521806898876214
Q gi|254780622|r  241 PVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQ  320 (405)
Q Consensus       241 ~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k  320 (405)
                      |++++.|+++++++|+|++||++++++.+++|++||+||||||+|++.+++||||++. +.++|+|++|||||+++++++
T Consensus       306 p~~l~~P~gv~~i~V~tA~eM~~av~~~~~~Di~I~aAAVsDyrp~~~~~~KiKK~~~-~~~~L~L~~npDIL~~i~~~~  384 (476)
T PRK13982        306 PVDLRDPQGVKVIHVESAREMLAAVEAALPADIAIFAAAVADWRVANEGGQKLKKGAA-GPPPLQLVENPDILATISKLA  384 (476)
T ss_pred             CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHCCCCCCEECCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHH
T ss_conf             6777789984699887999999999733132633532221455205654346145778-766357767953999998742


Q ss_pred             -CCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCE----EECCCCCHHHHHHHHH
Q ss_conf             -89958999811412389999999997499899992057767777766118999836985----9727899899999999
Q gi|254780622|r  321 -CRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKI----EEYPELPKAEVADRLC  395 (405)
Q Consensus       321 -~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~----~~~~~~sK~~iA~~Il  395 (405)
                       .+++++|||+|||++++++|++||++|||||||||+|++...+||+|+|+++|++++|.    ++||.++|.++|++|+
T Consensus       385 ~~~~~~~VGFAAETe~li~~A~~KL~~K~~D~IvaNdv~~~~~gFgsD~N~V~ii~kdg~~~~ie~~P~~sK~evA~~Il  464 (476)
T PRK13982        385 ENRPPLVIGFAAETEHLIDNARAKLARKGCDWIVANDVSPATGVMGGDRNTVHLLTRDGDAVDVESWPVMTKDEVATALV  464 (476)
T ss_pred             CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCHHHHHHHHH
T ss_conf             57998899980386837999999999729899998078888997588852899996899712220066899999999999


Q ss_pred             HHHHHHHCC
Q ss_conf             999998517
Q gi|254780622|r  396 HLIVEHLGM  404 (405)
Q Consensus       396 ~~i~~~L~~  404 (405)
                      ++|.+.|..
T Consensus       465 d~I~~~~s~  473 (476)
T PRK13982        465 ARIASTFTV  473 (476)
T ss_pred             HHHHHHHCC
T ss_conf             999997276


No 2  
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=100.00  E-value=0  Score=968.20  Aligned_cols=390  Identities=46%  Similarity=0.695  Sum_probs=375.4

Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88556999952847899999999999987988999858568630698999997479758207678877877430011446
Q gi|254780622|r    3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANEC   82 (405)
Q Consensus         3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~a   82 (405)
                      |+||||+|||||||||||+++|+|+|+|+|++|+|+||++|++||+|++|+++|+++|++|.|+.....+++||+|++||
T Consensus         2 L~gK~IllgVtGsIAayK~~~L~r~L~k~G~~V~vvmT~~A~~fi~plt~~~ls~~~V~td~~~~~~~~~~~HI~la~~a   81 (392)
T PRK05579          2 LAGKRIVLGVSGGIAAYKALELVRRLRKAGADVRVVMTEAALKFVTPLTFQALSGNPVYTDLWDPAAEAAMGHIELAKWA   81 (392)
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHC
T ss_conf             99998999983379999999999999878998999988537542799899998099886277787666775463441315


Q ss_pred             CEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
Q ss_conf             55788411188898852024552146667522799689840566000003889999999864000134652125531032
Q gi|254780622|r   83 DLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNG  162 (405)
Q Consensus        83 D~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~  162 (405)
                      |+++|||||||||||+|+|||||++|++++|+ ++|+++|||||++||+||+||+|+++|+++|+.|++|+.|.|| ||+
T Consensus        82 D~~liAPATAN~iaK~A~GiaDdllt~~~la~-~~pv~iaPAMn~~M~~np~tq~Ni~~L~~~G~~vi~P~~G~LA-cgd  159 (392)
T PRK05579         82 DLVLIAPATADLIAKLAHGIADDLLTTTLLAT-DAPVLVAPAMNTQMWENPATQRNLATLRSRGVLVIGPASGRLA-CGD  159 (392)
T ss_pred             CEEEECCCCHHHHHHHHCCCCCHHHHHHHHHC-CCCEEEEECCCHHHHHCHHHHHHHHHHHHCCCEEECCCCCCCC-CCC
T ss_conf             76898323378999987577437888888853-9957998376988886979999999997369888189667524-633


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             23334345589999999863101320017977898404201010213576215772788999999982588389984156
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV  242 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~  242 (405)
                      +|+||||||++|+.++++.+..   ++|+|||||||+|||+|+|||||||||+||||||++||++|+++||+|+||+||+
T Consensus       160 ~G~Grl~ep~~I~~~i~~~l~~---~~l~gkkvLITaG~T~E~IDpVR~IsN~SSGkmG~aiA~~a~~~GA~VtlI~g~~  236 (392)
T PRK05579        160 VGKGRMAEPEEIVAAAERLLGP---KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPV  236 (392)
T ss_pred             CCCCCCCCHHHHHHHHHHHCCC---CCCCCCEEEEECCCCEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             2356899999999999985067---7767887999747724776762476657865899999999996799799996478


Q ss_pred             CCCCCCCEEEEEHHHHHHHHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCC
Q ss_conf             6776567467546577899999985058-887997404444432222101123345577510455218068988762148
Q gi|254780622|r  243 SIADPPNVMTIHVERAEDMLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQC  321 (405)
Q Consensus       243 ~~~~~~~~~~i~v~t~~em~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~  321 (405)
                      ++..|+++++++|+|++||++++++.++ +|++||+||||||+|.+++++|+||++.++.++|+|++|||||+++++ ++
T Consensus       237 ~~~~p~~v~~i~v~ta~eM~~~v~~~~~~~D~~I~aAAVsDf~p~~~~~~Kikk~~~~~~~~l~L~~npDIL~~i~~-~~  315 (392)
T PRK05579        237 NLPTPAGVKRIDVESAQEMLDAVLAAAQKADIFIMAAAVADYRPATVAEQKIKKTEDGDELTLELVPNPDILAEVAA-LK  315 (392)
T ss_pred             CCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHC-CC
T ss_conf             77899996799967599999999973544789999301100011454565547677888865787528289999861-28


Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHH
Q ss_conf             995899981141238999999999749989999205776777776611899983698597278998999999999999
Q gi|254780622|r  322 RPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVADRLCHLIV  399 (405)
Q Consensus       322 ~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA~~Il~~i~  399 (405)
                      |++++|||||||++++++|++||++|+||+||||++++ ..+||+|+|+++|+++++.++++.++|.++|++|+|+|.
T Consensus       316 ~~~~~VGFaaEt~~l~~~A~~Kl~~K~~D~IvaN~v~~-~~gFgsd~N~v~ii~~~g~~~~~~~sK~~iA~~Ild~Ia  392 (392)
T PRK05579        316 DNQPLVGFAAETGNVLEYARAKLKRKGLDLIVANDVSA-GGGFGSDENAVTLLWKDGEKELPLASKLELARRLLDEIA  392 (392)
T ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCC-CCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHHC
T ss_conf             99759999637771899999999975989999935899-988787863999997999188588999999999999859


No 3  
>COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism]
Probab=100.00  E-value=0  Score=738.24  Aligned_cols=390  Identities=45%  Similarity=0.653  Sum_probs=367.6

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88855699995284789999999999998798899985856863069899999747975820767887787743001144
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANE   81 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~   81 (405)
                      .|+||+|+|||||||||||+++++|.|++.|++|+|+||++|++||+|++|+++++|+|++ .+++.....++||+|++|
T Consensus         1 ~l~~k~ill~v~gsiaayk~~~l~r~L~~~ga~v~vvmt~~a~~fv~p~~~~~~s~~~v~t-~~~~~~~~~~~HI~l~~~   79 (392)
T COG0452           1 LLEGKRILLGVTGSIAAYKSVELVRLLRRSGAEVRVVMTESARKFITPLTFQALSGNPVYT-LLDEELTGSVEHIELARW   79 (392)
T ss_pred             CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCHHHHHCCCCCC-CCCCCCCCCCCHHHHHHH
T ss_conf             9877638999417333446789999876279736897065564223740488760897311-255566566427765320


Q ss_pred             CCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
Q ss_conf             65578841118889885202455214666752279968984056600000388999999986400013465212553103
Q gi|254780622|r   82 CDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESN  161 (405)
Q Consensus        82 aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~  161 (405)
                      +|+++|+|||+|||+|+|+|++||++|+++++. ..|++++||||+.||+||++|+|+++|+.+|+.+|+|+.|.++   
T Consensus        80 adl~lvaPaTan~i~Kla~g~aD~~~t~~~~a~-~~p~~~aPamn~~M~~~~~tq~n~~~l~~~g~~~I~p~~~~~a---  155 (392)
T COG0452          80 ADLLLVAPATANTIAKLAVGIADNLSTTTLLAA-KAPLVLAPAMNVIMYTHPATQENLQRLKSEGVLFIEPIEGELA---  155 (392)
T ss_pred             CCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHH-CCCEEECCCCCHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCC---
T ss_conf             688996799711688876412043887799874-5836871464657643776776999886569589765533200---


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             22333434558999999986310132001797789840420101021357621577278899999998258838998415
Q gi|254780622|r  162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~  241 (405)
                      +.|.|||+||++|+..+.+.+...   +|+|++||||+|||+|+|||||||||+||||||++||++++++||+|++|+||
T Consensus       156 ~~g~g~~~e~~~Iv~~~~~~~~~~---~l~gk~Vlit~G~t~E~idpvr~itn~ssGk~g~alA~a~~~~GA~V~lv~g~  232 (392)
T COG0452         156 DVGDGRLAEPEEIVEAALALLKTP---DLKGKKVLITAGPTREYIDPVRFISNRSSGKMGFALAAAAKRRGASVTLVSGP  232 (392)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCC---CCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCC
T ss_conf             123334689899999987314651---22697798747986657662012124445545689999999769825881487


Q ss_pred             CCCCCCCCEEEEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCC
Q ss_conf             6677656746754657789999998505-888799740444443222210112334557751045521806898876214
Q gi|254780622|r  242 VSIADPPNVMTIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQ  320 (405)
Q Consensus       242 ~~~~~~~~~~~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k  320 (405)
                      +++..|+++..++|.|++||++++.+.. ++|++|++|||+||+|+..+++|+||  ..+.+.|+|.+|||||.++++.+
T Consensus       233 ~~~~~p~~v~~v~v~sa~em~~~v~~~~~~~d~~i~~aAvaD~~~~~~~~~Kikk--~~~~~~l~l~~n~dil~~~~~~~  310 (392)
T COG0452         233 TSLKIPAGVEVVKVESAEEMLNAVLEAALPADIFISAAAVADYRPKWVAEAKIKK--QGEPFKLELVPNPDILASVARDY  310 (392)
T ss_pred             CCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCCCEEC--CCCCEEEEECCCCHHHHHHHHHC
T ss_conf             7677876442021000999999997414431000121023103346444230213--78833799457803999998643


Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCE-EECCCCCHHHHHHHHHHHHH
Q ss_conf             89958999811412389999999997499899992057767777766118999836985-97278998999999999999
Q gi|254780622|r  321 CRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKI-EEYPELPKAEVADRLCHLIV  399 (405)
Q Consensus       321 ~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~-~~~~~~sK~~iA~~Il~~i~  399 (405)
                      ...+++|||+|||++++++|++|+.+|++|+++||+++..  +||+|+|+++++++++. .+++.++|.++|++|++++.
T Consensus       311 ~~~~~~Vgfaaet~~~~~~a~~kl~~k~~D~i~aNd~~~~--~fg~d~n~~~~~~~d~~~~~~~~~~k~~~a~~i~~~i~  388 (392)
T COG0452         311 PKKNILVGFAAETGDIVEYAREKLERKNLDLIVANDVSEI--GFGSDDNEVRIIDKDGEDVELPEMSKEELAERILDEIA  388 (392)
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCC--CCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHH
T ss_conf             5776389983570778899999865417876885344456--77865321054215997512455477889999999998


Q ss_pred             HHHC
Q ss_conf             9851
Q gi|254780622|r  400 EHLG  403 (405)
Q Consensus       400 ~~L~  403 (405)
                      +.+.
T Consensus       389 ~~~~  392 (392)
T COG0452         389 ELLE  392 (392)
T ss_pred             HHHC
T ss_conf             8519


No 4  
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; InterPro: IPR005252   This entry represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, (6.3.2.5 from EC), and decarboxylation, (4.1.1.36 from EC)) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. The amino-terminal region is responsible for the phosphopantothenoylcysteine decarboxylase activity .   In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein [.   It has been suggested that this bifunctional protein should be renamed coaBC ..
Probab=100.00  E-value=0  Score=687.98  Aligned_cols=395  Identities=41%  Similarity=0.612  Sum_probs=376.9

Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCC
Q ss_conf             8855699995284789999999999998798899985856863069899999747975--82076788778774300114
Q gi|254780622|r    3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRV--YTHLLSYKEGYESNHIQLAN   80 (405)
Q Consensus         3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v--~~~~~~~~~~~~~~Hi~l~~   80 (405)
                      |+||+|++|||||||+||+++++|+|.++|++|+|+||++|++||+|++|+++++|++  +++.|+..++..+.||+++.
T Consensus         1 l~~k~~~~~~~g~ia~~~~~~l~~~l~~~ga~v~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   80 (418)
T TIGR00521         1 LENKKILLGVTGGIAAYKTVELVRELVKAGAEVKVIMTEAAKKFITPLTLEALSGHKVLGVTELWGPIEHNALGHIDLAK   80 (418)
T ss_pred             CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             99865899843641456789999999856971699863223534122333332066432310000102344444443216


Q ss_pred             CCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCC-CCCEEEECCCCCHHHHHHHHHHHHHHHHHH-CCCCCCCCHHHHH
Q ss_conf             46557884111888988520245521466675227-996898405660000038899999998640-0013465212553
Q gi|254780622|r   81 ECDLLVVAPASANFIAHVAHGMVYDLASAILLAKG-DQPVLIAPAMNFMMWAKPATQRNVEILQKD-GCYFIGPESGAMA  158 (405)
Q Consensus        81 ~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~-~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~-g~~vi~P~~g~la  158 (405)
                      |+|+++++|||+|+++|+++|++||+++++++++. ++|++++||||++||++|++++|+.+|+.. |+.+++|..|.++
T Consensus        81 ~ad~~~~~P~t~~~~~k~~~g~ad~~~~~~~l~~~g~~P~~~~p~~~~~~~~~~~~~~n~~~l~~~~~~~~~~p~~g~~a  160 (418)
T TIGR00521        81 WADLILIAPATANTISKLAHGIADDLLSTTLLAASGGAPIILAPAMNENMYNNPAVQENLKRLKDDDGYIFIEPDSGLLA  160 (418)
T ss_pred             CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE
T ss_conf             87779982420236888753221135788887506998679851111444201678888988752388378747752110


Q ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             10322333434558999999986310132001797789840420101021357621577278899999998258838998
Q gi|254780622|r  159 ESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       159 ~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li  238 (405)
                       |+++|+||+++|++|+..+.+.+......+++|++|+||+|||+|+|||||||+|+||||||++||++++++||+|++|
T Consensus       161 -c~~~g~g~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~g~t~e~~dp~r~~~n~s~G~~g~~~a~~~~~~Ga~v~~~  239 (418)
T TIGR00521       161 -CGDEGKGRLAEPETIVKAAERELSPKGSADLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLI  239 (418)
T ss_pred             -CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf             -0111555567988999999986235310322586489953876011133000045664347899999998659717998


Q ss_pred             ECCCCCCCCC-CEEEEEHHHHHHHHHHHH-HCC-CCC------EEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
Q ss_conf             4156677656-746754657789999998-505-888------7997404444432222101123345577510455218
Q gi|254780622|r  239 SGPVSIADPP-NVMTIHVERAEDMLQEVL-KAL-PVD------IAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN  309 (405)
Q Consensus       239 ~g~~~~~~~~-~~~~i~v~t~~em~~~~~-~~~-~~D------~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~  309 (405)
                      +||.+...|+ +++.++|.++.||.++++ +.. .+|      ++|.+|||+||++....++|+|++ .++.+.++|.+|
T Consensus       240 ~g~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~p~~~~~aa~~d~~~~~~~~~k~~~~-~~~~~~~~l~~~  318 (418)
T TIGR00521       240 AGPVSLPTPPGGVKSIKVLTAEEMLEAALNELAKDFDKHALKPIFIGAAAVADFKPKTVFEGKIKKS-QGEELSLKLKKN  318 (418)
T ss_pred             ECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCC-CCCCEEEEEECC
T ss_conf             4477877675202344122089999999999873100000111321112220231210000022103-677405763057


Q ss_pred             HHHHHHHHHCCCCCCEEEEEECCCCH----HHHHHHHHHH--HCC---CCEEEEECCCCCCCCCCCCCEEEEEECCCC-E
Q ss_conf             06898876214899589998114123----8999999999--749---989999205776777776611899983698-5
Q gi|254780622|r  310 PDILKIIGHHQCRPSIVVGFAAETQC----IEQNAREKLL--NKG---ADFIVSNCILPDTGFVGKEWNKVSIVFPDK-I  379 (405)
Q Consensus       310 pdIL~~i~~~k~~~~~lVGFkaET~~----l~~~A~~Kl~--~K~---~D~IVAN~i~~~~~~fgsd~n~v~li~~~~-~  379 (405)
                      |||+..+++.+.+++++|||+||+++    ++++|++|+.  ++|   +|+|+||+++....+||+|+|+++++++++ .
T Consensus       319 p~~~~~~~~~~~~~~~~~Gf~ae~~~~~~~~~~~a~~~l~p~~~ng~dl~~~~an~~~~~~~gfg~~~n~~~~~~~~g~~  398 (418)
T TIGR00521       319 PDIIKEVGKIKKHEQVIVGFKAETNDDNDELIKYAKEKLKPFKKNGKDLDLIVANDVSQPGRGFGSDENEVYIFSKHGHE  398 (418)
T ss_pred             HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCE
T ss_conf             15788765216766358887303688566888888985204440787101587414556766667543258998458752


Q ss_pred             EECCCCCHHHHHHHHHHHHH
Q ss_conf             97278998999999999999
Q gi|254780622|r  380 EEYPELPKAEVADRLCHLIV  399 (405)
Q Consensus       380 ~~~~~~sK~~iA~~Il~~i~  399 (405)
                      .+++.++|.+++.+|++.+.
T Consensus       399 ~~~~~~~k~~~~~~~~~~~~  418 (418)
T TIGR00521       399 KELPLMSKLELAERILDEIL  418 (418)
T ss_pred             EECCCHHHHHHHHHHHHHHC
T ss_conf             32020116789999998719


No 5  
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=100.00  E-value=0  Score=442.47  Aligned_cols=178  Identities=42%  Similarity=0.617  Sum_probs=172.1

Q ss_pred             CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             85569999528478999999999999879889998585686306989999974797582076788778774300114465
Q gi|254780622|r    4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECD   83 (405)
Q Consensus         4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD   83 (405)
                      .+|||||||||||||||+++|+|+|+++|++|+||||++|++||+|++|+++++++||+|.++++.+..++||+|++|+|
T Consensus         1 m~K~IllgvtGsIAayK~~~lir~L~k~g~~V~vi~T~~A~~fv~~~~~~~ls~~~v~~d~~~~~~~~~~~HI~L~~waD   80 (180)
T PRK07313          1 MTKKILLAVSGSIAAYKAADLTSQLTKIGYDVTVIMTKAATQFITPLTLQVLSKNPVHLDVMDEEDPKSMNHIELAKNTD   80 (180)
T ss_pred             CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCHHHHHHHCCCEEECCCCCCCCCCCCCCEEECCCCC
T ss_conf             99769999954999999999999999889959999774699766987898872992883788654678766121232038


Q ss_pred             EEEEEECCHHHHHHHHCCCCCCHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
Q ss_conf             5788411188898852024552146667522-799689840566000003889999999864000134652125531032
Q gi|254780622|r   84 LLVVAPASANFIAHVAHGMVYDLASAILLAK-GDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNG  162 (405)
Q Consensus        84 ~~iVaPaTaNtiaK~A~GiaD~llt~~~la~-~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~  162 (405)
                      ++||||||||||||+|+|+|||++|++++|+ .++|+++|||||++||+||+||+|+++|+++|++|++|++|.|| ||+
T Consensus        81 l~lIaPaTANtiaK~A~GiaDnllt~~~lA~~~~~Pv~iaPAMn~~Mw~~p~tq~nl~~L~~~G~~ii~P~~G~La-cg~  159 (180)
T PRK07313         81 LFLVAPATANTIAKLAHGIADNLVTSVALALPATTPKLIAPAMNTKMYQNPATQRNIKRLKEDGVTIIEPKEGLLA-CGD  159 (180)
T ss_pred             EEEEECCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHCHHHHHHHHHHHHCCCEEECCCCCCCC-CCC
T ss_conf             8898108686999998412472999999972689988995177888887988999999999789899869745107-998


Q ss_pred             CCCCCCCCHHHHHHHHHHHH
Q ss_conf             23334345589999999863
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLL  182 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~  182 (405)
                      +|.|||+||++|++++.++|
T Consensus       160 ~G~Grm~e~~~Iv~~i~~~l  179 (180)
T PRK07313        160 EGYGALAEIDTILSTIENLL  179 (180)
T ss_pred             CCCCCCCCHHHHHHHHHHHH
T ss_conf             12568999999999999975


No 6  
>pfam04127 DFP DNA / pantothenate metabolism flavoprotein. The DNA/pantothenate metabolism flavoprotein (EC:4.1.1.36) affects synthesis of DNA, and pantothenate metabolism.
Probab=100.00  E-value=0  Score=429.56  Aligned_cols=189  Identities=38%  Similarity=0.552  Sum_probs=173.3

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--CCCCEEEEEHHHHHHHHHHHHHC
Q ss_conf             7977898404201010213576215772788999999982588389984156677--65674675465778999999850
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--DPPNVMTIHVERAEDMLQEVLKA  268 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--~~~~~~~i~v~t~~em~~~~~~~  268 (405)
                      +||+||||+|||+|||||||||||+|||+||++||++|+++||+||||+||++..  +|.++++++|+|++||++++++.
T Consensus         1 kgk~vlITaG~T~E~ID~VR~ItN~SSGkmG~alA~~~~~~Ga~V~li~g~~~~~~~~~~~~~~i~v~t~~em~~~~~~~   80 (197)
T pfam04127         1 KGRRVLVTSGGTREPIDPVRFISNFSSGKMGAAIAEEFLKRGADVTLIAGKGSLKPEPSGNLLIIPVETAEEMLNALKEI   80 (197)
T ss_pred             CCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
T ss_conf             99899993688644438831536269559999999999978993899723565566898881899968999999999974


Q ss_pred             CC--CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCC----CHHHHHHHH
Q ss_conf             58--887997404444432222101123345577510455218068988762148995899981141----238999999
Q gi|254780622|r  269 LP--VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAET----QCIEQNARE  342 (405)
Q Consensus       269 ~~--~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET----~~l~~~A~~  342 (405)
                      .+  +|++|||||||||+|...+++||||.   +.++|+|++|||||+++++. .|++++|||||||    ++++++|++
T Consensus        81 ~~~~~D~~I~aAAVsDf~p~~~~~~Kikk~---~~~~l~L~~tpdIL~~i~~~-~~~~~lVGFaaEt~~~~e~li~~A~~  156 (197)
T pfam04127        81 APDLHDVFILAAAVSDFRPKEMAEHKISSG---SELTLELKPNPKIISYVKEW-NPNAFLVGFKAETGVDEEELIDKARK  156 (197)
T ss_pred             CCCCCCEEEEEEECCCCCCCCHHCCEECCC---CCCCCCCCCCHHHHHHHHHH-CCCCEEEEEEECCCCCHHHHHHHHHH
T ss_conf             756577999910004455400110664678---75513346883699998875-79967999980638857899999999


Q ss_pred             HHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHH
Q ss_conf             9997499899992057767777766118999836985972789989
Q gi|254780622|r  343 KLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKA  388 (405)
Q Consensus       343 Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~  388 (405)
                      ||++|+||+||||+++    +||+|+|+++||++++. +++.+||.
T Consensus       157 KL~~K~~D~IvAN~v~----~fgsd~n~v~ii~~~~~-e~~~~sKk  197 (197)
T pfam04127       157 KLEKYNHDLVIANDVE----GFGTDKNRVIIVSKNEV-ELVLTSKK  197 (197)
T ss_pred             HHHHCCCCEEEECCCC----CCCCCCCEEEEEECCCE-EECCCCCC
T ss_conf             9997599999982777----55888508999979987-90476889


No 7  
>PRK09620 hypothetical protein; Provisional
Probab=100.00  E-value=0  Score=420.27  Aligned_cols=206  Identities=24%  Similarity=0.290  Sum_probs=179.7

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC---CCCEEEEEHHHHHHHHHHHH
Q ss_conf             179778984042010102135762157727889999999825883899841566776---56746754657789999998
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIAD---PPNVMTIHVERAEDMLQEVL  266 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~---~~~~~~i~v~t~~em~~~~~  266 (405)
                      |+|||||||+|||+|||||||||||+||||||++||++|++|||+||||+|+++..+   +.++++++++|+.||.+++.
T Consensus         1 L~GkkVLITaG~T~E~IDpVR~ItN~SSGkmG~aiA~~a~~~GA~Vtli~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~   80 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMK   80 (229)
T ss_pred             CCCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHH
T ss_conf             99989999588875666884562776823999999999997799799994588778987788835898500999999999


Q ss_pred             HCC---CCCEEEEEHHHHHHHHHHHHH---------CCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf             505---888799740444443222210---------11233455775104552180689887621489958999811412
Q gi|254780622|r  267 KAL---PVDIAVMVSAVSDWRFPKIAG---------TKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQ  334 (405)
Q Consensus       267 ~~~---~~D~~I~aAAVSDf~~~~~~~---------~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~  334 (405)
                      ...   ++|++||+||||||+|+++++         +|++  + +..+.|+|++|||||+++++ +.|++++|||||||+
T Consensus        81 ~~~~~~~~D~~I~aAAVsDf~~~~~~~~~~~~~~~~~Ki~--s-~~~~~i~L~~tpdIl~~i~~-~~~~~~lVGFkaEt~  156 (229)
T PRK09620         81 SIITHEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGKIS--S-DIAPIIHFQKAPKVLKQIKQ-WDPETVLVGFKLESD  156 (229)
T ss_pred             HHHCCCCCCEEEECCCHHCCCCCCCCCCCCCCHHHCCCCC--C-CCCCEEECCCCHHHHHHHHH-HCCCCEEEEEEECCC
T ss_conf             9845678899999545020131302323232001126767--7-87553321257799999872-389986999983788


Q ss_pred             ----HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             ----3899999999974998999920577677777661189998369859727899899999999999998517
Q gi|254780622|r  335 ----CIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVADRLCHLIVEHLGM  404 (405)
Q Consensus       335 ----~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA~~Il~~i~~~L~~  404 (405)
                          +++++|++||++|+|||||||++..    |+++.|++|||++++.... .++|.++|++|+++|...++.
T Consensus       157 ~~~e~Li~~A~~kl~~k~~D~ivAN~~~~----~~~~~~~~~ii~~d~~~~~-~~sK~eiA~~I~~~i~~l~~~  225 (229)
T PRK09620        157 VNEEELFERAKNRMEEAKASVMIANSPHS----LYSRGAMHYVIGQDGKGQL-CNGKDETAKEIVKRLEVLCNH  225 (229)
T ss_pred             CCHHHHHHHHHHHHHHCCCCEEEECCHHH----CCCCCCEEEEECCCCCEEC-CCCHHHHHHHHHHHHHHHHHH
T ss_conf             96789999999999976999999848766----5789865999928994762-789999999999999999766


No 8  
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=100.00  E-value=0  Score=419.01  Aligned_cols=200  Identities=29%  Similarity=0.425  Sum_probs=178.7

Q ss_pred             CEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC--CCEEEEEHHHHHHHHHHHHHCCC
Q ss_conf             7789840420101021357621577278899999998258838998415667765--67467546577899999985058
Q gi|254780622|r  193 KRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADP--PNVMTIHVERAEDMLQEVLKALP  270 (405)
Q Consensus       193 k~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~--~~~~~i~v~t~~em~~~~~~~~~  270 (405)
                      .|||||+|||+|||||||||||+||||||++||++|+.+||+||||+||+++.++  +++++++|+|++||++++.+.++
T Consensus         1 ~kvLITaG~T~E~ID~VR~IsN~SSGk~G~aiA~~~~~~Ga~Vtli~g~~~~~p~~~~~~~~i~v~ta~em~~~~~~~~~   80 (228)
T PRK06732          1 MKILITSGGTTEPIDAVRGITNHSTGQLGKIIAETFLQAGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLATLKPLVP   80 (228)
T ss_pred             CEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCC
T ss_conf             98999578876676884476767814999999999997899899995677568898898589994589999999997478


Q ss_pred             -CCEEEEEHHHHHHHHHHH--------------------HHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEE
Q ss_conf             -887997404444432222--------------------10112334557751045521806898876214899589998
Q gi|254780622|r  271 -VDIAVMVSAVSDWRFPKI--------------------AGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGF  329 (405)
Q Consensus       271 -~D~~I~aAAVSDf~~~~~--------------------~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGF  329 (405)
                       +|++||+||||||+|...                    ..+|+  ++..+.+.|+|++|||||+.+ +.|.|++++|||
T Consensus        81 ~~D~~I~aAAVsDy~p~~~~~~~~~~~~~~~~~~~~~~~~~~Ki--~s~~~~~~l~L~~~pkil~~v-~~~~~~~~~VGF  157 (228)
T PRK06732         81 HHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLCKPNSESKI--SSASDYQVLFLKKTPKVISYV-KQWNPNIKLVGF  157 (228)
T ss_pred             CCCEEEEEEEECCCEEHHHHHHHHHHCCCHHHHHHCCCCHHCCC--CCCCCCCEEECCCCCHHHHHH-HHHCCCCEEEEE
T ss_conf             99999993181015210110345543010034431132011153--568873364143581999998-854899658986


Q ss_pred             ECCC----CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             1141----23899999999974998999920577677777661189998369859727899899999999999998
Q gi|254780622|r  330 AAET----QCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVADRLCHLIVEH  401 (405)
Q Consensus       330 kaET----~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA~~Il~~i~~~  401 (405)
                      ||||    ++++++|++||++||||+||||+++.    ||+|+|+++||++++.+.  ..+|.++|++|+|+|.++
T Consensus       158 klet~~~~e~Li~~A~~kL~~k~~D~ivAN~v~~----~g~d~n~~~ii~~~~~~~--~~sK~eiA~~i~~~i~k~  227 (228)
T PRK06732        158 KLLVNVSKEELFKVARASLIKNQADYILANDLTD----ISAGQHKALLVSKNEVQS--ADTKEEIADLLYERIEKH  227 (228)
T ss_pred             EEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCC----CCCCCEEEEEEECCCEEE--CCCHHHHHHHHHHHHHHC
T ss_conf             6423765679999999999976999999926663----589952999995899284--689999999999999734


No 9  
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase; InterPro: IPR011848    In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis. These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This entry describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of IPR005252 from INTERPRO, corresponding to phosphopantothenate--cysteine ligase activity ..
Probab=100.00  E-value=0  Score=322.01  Aligned_cols=201  Identities=27%  Similarity=0.359  Sum_probs=177.3

Q ss_pred             CEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC--CEEEEEHHHHHHHHHHHHHCC-
Q ss_conf             77898404201010213576215772788999999982588389984156677656--746754657789999998505-
Q gi|254780622|r  193 KRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPP--NVMTIHVERAEDMLQEVLKAL-  269 (405)
Q Consensus       193 k~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~--~~~~i~v~t~~em~~~~~~~~-  269 (405)
                      .+||||||||.||||.||.|||+|||..|..||+.+++.||+||||+.+..+.|.+  ++...++++.+|+..++.+.. 
T Consensus         1 Mk~LvTsGGTsE~ID~VRSITNHStG~LGK~IaE~fL~~Gh~VtlvTTK~A~kP~~~~~Lsi~Eie~~~~L~~~L~~~v~   80 (253)
T TIGR02114         1 MKILVTSGGTSEPIDNVRSITNHSTGGLGKIIAEKFLAAGHEVTLVTTKRALKPEPQLNLSIKEIETVKDLLTTLKELVA   80 (253)
T ss_pred             CCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCC
T ss_conf             93688158863666663551233768721799999986587897875361218888888624864277899999887501


Q ss_pred             C--CCEEEEEHHHHHHHHHH------------------------------------------HHHCCCCCCCCCCCCEEE
Q ss_conf             8--88799740444443222------------------------------------------210112334557751045
Q gi|254780622|r  270 P--VDIAVMVSAVSDWRFPK------------------------------------------IAGTKIKRKDIGDTMRID  305 (405)
Q Consensus       270 ~--~D~~I~aAAVSDf~~~~------------------------------------------~~~~Kikk~s~~~~l~L~  305 (405)
                      +  +|++||++|||||+|..                                          -...||  ||..|.+.|-
T Consensus        81 ~kq~d~liHsMAVSDYTpvym~~~E~v~~SfaqqLseqtLPktkeaLvtivq~~L~~fl~~~n~~~KI--SS~~d~qvlF  158 (253)
T TIGR02114        81 EKQHDILIHSMAVSDYTPVYMTDLEQVKDSFAQQLSEQTLPKTKEALVTIVQDNLNEFLDKDNHETKI--SSDSDYQVLF  158 (253)
T ss_pred             CCCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCEEEE
T ss_conf             25543888851126885100011678999998755420365201452233365367773124667875--5533524555


Q ss_pred             EEECHHHHHHHHHCCCCCCEEEEEECCC----CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEE
Q ss_conf             5218068988762148995899981141----238999999999749989999205776777776611899983698597
Q gi|254780622|r  306 LMENPDILKIIGHHQCRPSIVVGFAAET----QCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEE  381 (405)
Q Consensus       306 L~~~pdIL~~i~~~k~~~~~lVGFkaET----~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~  381 (405)
                      |++||||+..+ +.|.|...||||||-.    |+|.+-||..|.++.||||+||||-+    ..++.++++||+.+|...
T Consensus       159 LKKtPKvIslv-k~wnP~i~LvGFKLLVnV~~e~Lv~vAr~sL~KN~adfiLANDL~~----i~~~~H~alLi~~~G~v~  233 (253)
T TIGR02114       159 LKKTPKVISLV-KDWNPQIKLVGFKLLVNVTQEELVKVARASLIKNRADFILANDLVD----ISETEHKALLIEENGEVQ  233 (253)
T ss_pred             ECCCCCEEEEE-ECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCC----CCCCCCEEEEECCCCEEE
T ss_conf             51799367776-5369947898677404378656899999854204557766534201----454566588761786167


Q ss_pred             CCCCCHHHHHHHHHHHHHHH
Q ss_conf             27899899999999999998
Q gi|254780622|r  382 YPELPKAEVADRLCHLIVEH  401 (405)
Q Consensus       382 ~~~~sK~~iA~~Il~~i~~~  401 (405)
                       ...||++||.-|++.+.++
T Consensus       234 -~a~tKe~Ia~Ll~e~v~k~  252 (253)
T TIGR02114       234 -EAQTKEEIAELLYEKVEKY  252 (253)
T ss_pred             -EEECHHHHHHHHHHHHHCC
T ss_conf             -7535689999988854226


No 10 
>KOG0672 consensus
Probab=100.00  E-value=1.8e-42  Score=293.05  Aligned_cols=178  Identities=34%  Similarity=0.505  Sum_probs=154.8

Q ss_pred             CCC-EEEEEEECHHHHHHHHHHHHHHHHC-C---CEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCC----CCCCCC
Q ss_conf             855-6999952847899999999999987-9---889998585686306989999974797582076788----778774
Q gi|254780622|r    4 SGK-KIALIMCGSVAVYKSLDLIRRLRER-G---AVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYK----EGYESN   74 (405)
Q Consensus         4 ~~k-~IllgvtGsiaa~k~~~l~~~L~~~-g---~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~----~~~~~~   74 (405)
                      .|| +||+|.|||+|++|.+.+++.|-+- |   .+|+||+|++|..|.....+...  -.+|+|.+.|+    -..++.
T Consensus        18 d~K~hvL~gaTGSvA~iK~~~li~kL~ei~G~dki~iqvvvT~~a~~f~~~~~l~~~--v~~~~d~DeW~~W~~r~dpVL   95 (218)
T KOG0672          18 DGKFHVLLGATGSVAVIKLPLLIKKLEEIYGRDKISIQVVVTKSATHFLEKLKLNKH--VQLYTDEDEWKMWKSRSDPVL   95 (218)
T ss_pred             CCCEEEEEEECCCCCEEEHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHCCCCCC--EEEECCHHHHHHHHHCCCCEE
T ss_conf             886469997136300002588999999861776236999981408889852446640--353057577665330588535


Q ss_pred             CCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCC-CCCEEEECCCCCHHHHHHHHHHHHHHHHH--HCCCCCC
Q ss_conf             30011446557884111888988520245521466675227-99689840566000003889999999864--0001346
Q gi|254780622|r   75 HIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKG-DQPVLIAPAMNFMMWAKPATQRNVEILQK--DGCYFIG  151 (405)
Q Consensus        75 Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~-~~pi~iaPaMn~~M~~~p~~~~nl~~L~~--~g~~vi~  151 (405)
                      ||+|.||||+++|||.||||+||+|+|+||||||++..|+. .+|+++|||||+.||+||.|++++..|++  .|+.++.
T Consensus        96 HIeLRrWADilliAPLsANTlaKiA~GlCDNLLTsviRAW~~skPil~aPaMnT~mw~np~T~~hl~~l~~~~~~~~~i~  175 (218)
T KOG0672          96 HIELRRWADILLIAPLSANTLAKIANGLCDNLLTSVIRAWDPSKPILLAPAMNTLMWNNPMTKKHLTSLKEEYPGITVIK  175 (218)
T ss_pred             EEHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEC
T ss_conf             43476653653434367215999872344678999999716678657623222354238104999999987547848965


Q ss_pred             CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             521255310322333434558999999986310
Q gi|254780622|r  152 PESGAMAESNGYGVGRMSEPCDIIRQITWLLYK  184 (405)
Q Consensus       152 P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~  184 (405)
                      |..+.|. |||+|.|.|+|+.+|+..+...+..
T Consensus       176 pieK~li-cGDiGlG~Mae~~~IV~~V~~~~~~  207 (218)
T KOG0672         176 PIEKVLI-CGDIGLGGMAEWGTIVSKVRRKLGE  207 (218)
T ss_pred             CHHEEEE-CCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             6210675-1564753104188899999999702


No 11 
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=100.00  E-value=1.3e-40  Score=281.11  Aligned_cols=172  Identities=22%  Similarity=0.279  Sum_probs=143.4

Q ss_pred             CCCCCCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECHHHHHHCCHH--------HHHHHHCCCCCCCCCCCCCCC
Q ss_conf             9888556999952847899-9999999999879889998585686306989--------999974797582076788778
Q gi|254780622|r    1 MDLSGKKIALIMCGSVAVY-KSLDLIRRLRERGAVVIPVMTKSAQKFITPL--------IVGAISNRRVYTHLLSYKEGY   71 (405)
Q Consensus         1 m~l~~k~IllgvtGsiaa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~--------~l~~lt~~~v~~~~~~~~~~~   71 (405)
                      |+|+||||++|||||||+| |+.+++|+|+++|++|++|||++|++|+++.        .++++||++|++++++     
T Consensus         1 M~L~gK~I~lgvTGSiaay~kv~~~ir~L~~~GA~V~~ImS~~a~~~~Trfg~~~~~~~~le~iTg~~vi~ti~~-----   75 (195)
T PRK08305          1 MSLKGKRIGFGLTGSHCTYEEVMPQIEKLVAEGAEVRPIVSYTVQTTDTRFGEGEEWIKKIEEITGFKVINSIVE-----   75 (195)
T ss_pred             CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECCC-----
T ss_conf             976898899996727998999999999999879969999754477505667527889999999859952001345-----


Q ss_pred             CCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHH--HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             77430011446557884111888988520245521466675--2279968984056600000388999999986400013
Q gi|254780622|r   72 ESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILL--AKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYF  149 (405)
Q Consensus        72 ~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~l--a~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~v  149 (405)
                       .+|+...+|+|+|||||||+|||+|+||||+|++++..+-  .++++||+++||||..||.|+.   |+.+|.+.++++
T Consensus        76 -aE~igp~~~~D~lvIAPaTaNtiaKLAnGI~DtpV~maaka~Lrn~kPVvia~stNd~l~~n~~---Ni~~Ll~~kniy  151 (195)
T PRK08305         76 -AEPLGPKKPLDCMVIAPCTGNTMAKLANGITDSPVLMAAKATLRNQKPVVLAISTNDALGLNAV---NLGRLLNTKNIY  151 (195)
T ss_pred             -CEECCCCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHCHH---HHHHHHHCCCEE
T ss_conf             -5133667633689990075418999865355877999999986279988999836867876899---999998269789


Q ss_pred             CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             4652125531032233343455899999998631
Q gi|254780622|r  150 IGPESGAMAESNGYGVGRMSEPCDIIRQITWLLY  183 (405)
Q Consensus       150 i~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~  183 (405)
                      ..| .|.-. |......-.++.+.|.+.++..+.
T Consensus       152 fvP-fgqd~-~~~Kp~slva~~~~l~~t~~~Al~  183 (195)
T PRK08305        152 FVP-FGQDD-PEKKPNSLVARMDLLIPTIEEALQ  183 (195)
T ss_pred             EEE-CCCCC-CCCCCHHHHHCHHHHHHHHHHHHC
T ss_conf             995-68867-344704565059877999999964


No 12 
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase; InterPro: IPR011847    In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis. These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This entry describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of IPR005252 from INTERPRO, corresponding to phosphopantothenoylcysteine decarboxylase activity ..
Probab=100.00  E-value=2.1e-41  Score=286.30  Aligned_cols=174  Identities=41%  Similarity=0.584  Sum_probs=167.1

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             56999952847899999999999987988999858568630698999997479758207678877877430011446557
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDLL   85 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~~   85 (405)
                      ++|+++|+|||++||+.++.+.|.+.|++|.++||++|++||+|++++.++.++|+.+......+..++||+|++.+|+|
T Consensus         1 ~~i~lav~Gsi~~yk~adl~~~l~k~G~~v~~lmt~~~~~fi~Pltlq~ls~n~~~~~vm~e~~P~~~nhi~lak~~~lf   80 (177)
T TIGR02113         1 KKILLAVSGSIAAYKAADLTSQLTKLGYDVEVLMTKAATEFITPLTLQVLSKNPVHLDVMKEEDPKVINHIELAKKADLF   80 (177)
T ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCCEE
T ss_conf             90578750103456677789998745861577520114645140354454100467876412476323354431125547


Q ss_pred             EEEECCHHHHHHHHCCCCCCHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCC
Q ss_conf             88411188898852024552146667522-79968984056600000388999999986400013465212553103223
Q gi|254780622|r   86 VVAPASANFIAHVAHGMVYDLASAILLAK-GDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYG  164 (405)
Q Consensus        86 iVaPaTaNtiaK~A~GiaD~llt~~~la~-~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G  164 (405)
                      +|+||||||++++|+|.+||+++++.++- ...|-+++||||+.||+||++|+|++.|++.|+..+.|+...|| |||.|
T Consensus        81 ~~~Pa~a~t~~~la~G~ad~~~~~~alal~~~~Pk~~aPamnt~my~~~~~q~n~~~l~~~~y~~i~P~~~lla-CGd~G  159 (177)
T TIGR02113        81 LVAPASANTIAKLAHGFADNLVTSVALALPSEVPKLIAPAMNTKMYQNPITQKNIKILKKIGYQEIQPKESLLA-CGDVG  159 (177)
T ss_pred             EEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC-CCCCC
T ss_conf             87054367899874022457888988765330530221245666652045688999998604100264045310-27888


Q ss_pred             CCCCCCHHHHHHHHHH
Q ss_conf             3343455899999998
Q gi|254780622|r  165 VGRMSEPCDIIRQITW  180 (405)
Q Consensus       165 ~grl~e~~~I~~~~~~  180 (405)
                      .|.+++.+.|+..+..
T Consensus       160 ~Gala~~~~il~~~~~  175 (177)
T TIGR02113       160 RGALADLETILEKIKE  175 (177)
T ss_pred             CCHHHHHHHHHHHHHH
T ss_conf             8326779999999884


No 13 
>pfam02441 Flavoprotein Flavoprotein. This family contains diverse flavoprotein enzymes. This family includes epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN. This enzyme catalyses the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance. dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase (EC:4.1.1.-).
Probab=99.97  E-value=1.2e-31  Score=223.50  Aligned_cols=116  Identities=42%  Similarity=0.579  Sum_probs=108.1

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             56999952847899999999999987988999858568630698999997479758207678877877430011446557
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDLL   85 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~~   85 (405)
                      |||++|||||+++|++++++++|++.|++|+++||++|++|+++.++++.++++++++.+++   ..+.|+++++|+|+|
T Consensus         1 kri~l~itGs~~a~~~~~ll~~L~~~~~~v~vv~S~~A~~~~~~~~~~~~~~~~~~~~~~~~---~~~~h~~~~~~~D~~   77 (118)
T pfam02441         1 KKILLGITGSSAAIKALRLLRELKKEGAEVRVILSKAAKKFITPETLEALLGNPVYTDENDE---GAPIHIELSRWADLM   77 (118)
T ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCEEEECCCC---CCCCCCCCCCCCCEE
T ss_conf             97999991789999999999999878997999976269876777668886099599972688---886511013455749


Q ss_pred             EEEECCHHHHHHHHCCCCCCHHHHHHHHC--CCCCEEEECC
Q ss_conf             88411188898852024552146667522--7996898405
Q gi|254780622|r   86 VVAPASANFIAHVAHGMVYDLASAILLAK--GDQPVLIAPA  124 (405)
Q Consensus        86 iVaPaTaNtiaK~A~GiaD~llt~~~la~--~~~pi~iaPa  124 (405)
                      +|+|||+|||||+|+|++|||++++++++  .++|++++|+
T Consensus        78 iI~PaSantlakiA~GiaD~ll~~~a~~~lk~~~pvii~Pa  118 (118)
T pfam02441        78 VVAPATANTLAKIANGIADNLLTRAALAALKERKPLVIAPA  118 (118)
T ss_pred             EEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECC
T ss_conf             98041499999997555797999999998426997899469


No 14 
>KOG2728 consensus
Probab=99.96  E-value=2.1e-28  Score=202.60  Aligned_cols=202  Identities=27%  Similarity=0.412  Sum_probs=153.9

Q ss_pred             CCCC-EEEEEECCCHHEEC--CEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC-----C--------------
Q ss_conf             1797-78984042010102--135762157727889999999825883899841566776-----5--------------
Q gi|254780622|r  190 LKGK-RALVTSGPTYEPLD--PMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIAD-----P--------------  247 (405)
Q Consensus       190 l~gk-~vlITaG~T~E~ID--~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~-----~--------------  247 (405)
                      ++|. =|+||+|||..|+.  +||||.|+|+|..|.+-|+++.+.|+.|+++|-..++.+     |              
T Consensus        28 ~~~rrIVlVTSGGTtVPLE~ntVRFiDNFSaGtRGAaSAE~Fl~agYaVIFl~R~~Sl~Py~R~f~~~~~~~~l~~~g~~  107 (302)
T KOG2728          28 LQGRRIVLVTSGGTTVPLEQNTVRFIDNFSAGTRGAASAEYFLAAGYAVIFLYRERSLFPYTRHFPGQTWFLFLRPSGSA  107 (302)
T ss_pred             CCCCEEEEEECCCEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf             55864999944985721355725765055767765031899986794599986046666420248972123332557743


Q ss_pred             --------C--------------------CEEEEEHHHHHHHH---HHHHHCC----CCCEEEEEHHHHHHHHHH--HHH
Q ss_conf             --------6--------------------74675465778999---9998505----888799740444443222--210
Q gi|254780622|r  248 --------P--------------------NVMTIHVERAEDML---QEVLKAL----PVDIAVMVSAVSDWRFPK--IAG  290 (405)
Q Consensus       248 --------~--------------------~~~~i~v~t~~em~---~~~~~~~----~~D~~I~aAAVSDf~~~~--~~~  290 (405)
                              +                    .+-.+++.|..|++   +++-+++    +.-+++.|||||||.++.  ...
T Consensus       108 ~~~~i~~~e~~~~vf~~~~~~~k~~~k~~~lL~vpFtT~~~Yl~~L~aiae~Ln~~~sramfYLAAAVSDFyVP~~~mpe  187 (302)
T KOG2728         108 LSGLIEKEENALPVFAEALEKYKYAEKAGTLLYVPFTTLADYLWLLRAIAEALNPLGSRAMFYLAAAVSDFYVPESEMPE  187 (302)
T ss_pred             CCCCEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCH
T ss_conf             46631048302589999998878888619489984204999999999999984534624799999875335258222644


Q ss_pred             CCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCH--HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
Q ss_conf             112334557751045521806898876214899589998114123--899999999974998999920577677777661
Q gi|254780622|r  291 TKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQC--IEQNAREKLLNKGADFIVSNCILPDTGFVGKEW  368 (405)
Q Consensus       291 ~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~--l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~  368 (405)
                      +||  +|++..|.++|.+.||.|..+...|.|+.++|.||+||++  ++.+|++-|.+++-.++|||.++.       ..
T Consensus       188 HKI--qSg~~~l~i~l~~VPK~L~~Lv~~WaP~AfiiSFKLETDesiLi~KAr~AL~kY~HqlVIAN~LsT-------Rk  258 (302)
T KOG2728         188 HKI--QSGSGPLQITLKPVPKMLSPLVSDWAPKAFIISFKLETDESILINKARKALEKYKHQLVIANLLST-------RK  258 (302)
T ss_pred             HHC--CCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEHHHH-------CC
T ss_conf             210--358998447833366889999985076507999983277178789999999972750564002330-------43


Q ss_pred             EEEEEECCCCEEECCCCCHHH--HHHHHHHHHHHH
Q ss_conf             189998369859727899899--999999999998
Q gi|254780622|r  369 NKVSIVFPDKIEEYPELPKAE--VADRLCHLIVEH  401 (405)
Q Consensus       369 n~v~li~~~~~~~~~~~sK~~--iA~~Il~~i~~~  401 (405)
                      .+|.+++++-. .+...+|..  |..-|++.++.+
T Consensus       259 ~~V~fVt~~~~-~~~~l~~~~~~IE~~ii~~vv~r  292 (302)
T KOG2728         259 SRVVFVTKNIV-QWLELDKAPGAIEDSIIKLVVSR  292 (302)
T ss_pred             EEEEEEECCCC-EEEECCCCCCHHHHHHHHHHHHH
T ss_conf             05999926731-02461666322677889999998


No 15 
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=99.90  E-value=3.9e-23  Score=168.69  Aligned_cols=159  Identities=18%  Similarity=0.204  Sum_probs=120.5

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHC-CCEEEEEECHHHHHHCCHHH------HHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             56999952847899999999999987-98899985856863069899------999747975820767887787743001
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRER-GAVVIPVMTKSAQKFITPLI------VGAISNRRVYTHLLSYKEGYESNHIQL   78 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~-g~~V~vv~T~~A~~fi~~~~------l~~lt~~~v~~~~~~~~~~~~~~Hi~l   78 (405)
                      |||+|||||+..++.+.++++.|.+. ++||++|+|++|++++...+      ++.+.. .+|.+. ++.    .++-+-
T Consensus         2 krIvvgITGASGa~ya~rll~~L~~~~~~ev~lv~S~~A~~v~~~E~~~~~~~~~~~~~-~~~~~~-d~~----A~iASG   75 (187)
T PRK06029          2 KRLIVGISGASGAIYGVRLLQVLRDVEEVETHLVISQAARQTLAHELDFSLREVQALAD-VVHDVR-DIG----ASIASG   75 (187)
T ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHH-EECCHH-CCC----CCCCCC
T ss_conf             73999985288899999999998642895699998868999999993998888655554-047730-107----875545


Q ss_pred             CCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf             144655788411188898852024552146667--522799689840566000003889999999864000134652125
Q gi|254780622|r   79 ANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGA  156 (405)
Q Consensus        79 ~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~  156 (405)
                      +.+.|.|||+|||+||+|++|+|++|||++..+  +...++|++++|   ..|-.|.+..||+.+|.+.|+.|++|..|.
T Consensus        76 S~~~d~MvI~PCSm~TLa~IA~G~sdnLi~RaAdV~LKErR~Lvlvp---REtPls~ihLeNMl~ls~~GaiI~P~~P~F  152 (187)
T PRK06029         76 SFGTDGMVIAPCSMKTLAKIAHGYSDNLLTRAADVMLKERRRLVLCV---RETPLHLGHLRNMTKLAEMGAIIMPPVPAF  152 (187)
T ss_pred             CCHHCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEE---CCCCCCHHHHHHHHHHHHCCCEEECCCCCC
T ss_conf             63007579941548899999700458889999999987178189997---688976899999999998899894798200


Q ss_pred             HHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             5310322333434558999999986
Q gi|254780622|r  157 MAESNGYGVGRMSEPCDIIRQITWL  181 (405)
Q Consensus       157 la~c~~~G~grl~e~~~I~~~~~~~  181 (405)
                      -        .+--..+++++++..-
T Consensus       153 Y--------~~p~si~dlv~fvvgr  169 (187)
T PRK06029        153 Y--------HRPQTLEDMVDQTVGR  169 (187)
T ss_pred             C--------CCCCCHHHHHHHHHHH
T ss_conf             2--------7999899999999999


No 16 
>PRK05920 aromatic acid decarboxylase; Validated
Probab=99.84  E-value=2e-19  Score=144.86  Aligned_cols=161  Identities=19%  Similarity=0.215  Sum_probs=116.0

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHH------HHHHH-----CC--------CCCCCCC
Q ss_conf             55699995284789999999999998798899985856863069899------99974-----79--------7582076
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLI------VGAIS-----NR--------RVYTHLL   65 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~------l~~lt-----~~--------~v~~~~~   65 (405)
                      -|||++||||...+.-...+++.|++.|++|++|+|++|.+.+...+      .+.+.     .+        .+|.+ .
T Consensus         4 mkrivvgITGASG~~ya~rll~~L~~~~~ev~lviS~~a~~v~~~E~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~   82 (205)
T PRK05920          4 MKRIVLAITGASGAIYGVRLLECLLAADYEVHLVISKAARKVLATETGLKLPAVPDLAEAFLREQLGANAGQLRVHGK-D   82 (205)
T ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCH-H
T ss_conf             875999986542799999999999867998999986789999999849984304788988877530256774478377-6


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf             7887787743001144655788411188898852024552146667--52279968984056600000388999999986
Q gi|254780622|r   66 SYKEGYESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQ  143 (405)
Q Consensus        66 ~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~  143 (405)
                      +...+..+.    +...|.|+|+|||++|+|++|+|++|||++..+  +...++|++++|   ..|-.|.+..||+.+|.
T Consensus        83 d~~A~iASG----S~~~dgMvV~PCSm~TLa~IA~G~sdnLi~RaAdV~LKErR~LVlvp---REtPls~iHLeNMlkls  155 (205)
T PRK05920         83 DWGAPIASG----SFATDGMVIAPCSMGTLAAIAHGLSDNLIERAADVVLKERRKLILVP---RETPLSLIHLENMLKLA  155 (205)
T ss_pred             HCCCCCCCC----CCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEE---CCCCCCHHHHHHHHHHH
T ss_conf             427865667----76658369941528789998734645589999999998568179997---68897689999999999


Q ss_pred             HHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             40001346521255310322333434558999999986
Q gi|254780622|r  144 KDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWL  181 (405)
Q Consensus       144 ~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~  181 (405)
                      +.|+.|++|..|.-        .|--..+++++++..-
T Consensus       156 ~~GaiI~P~~P~FY--------~~P~tiedlvdfvvgr  185 (205)
T PRK05920        156 EAGAVILPAIPAFY--------HKPQTIDDLVDFVVAR  185 (205)
T ss_pred             HCCCEEECCCCCCC--------CCCCCHHHHHHHHHHH
T ss_conf             88998947982002--------7999899999999999


No 17 
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; InterPro: IPR004507   This family contains flavoproteins, which are aromatic acid decarboxylases. An example is the Saccharomyces cerevisiae gene, PAD1 that encodes phenylacrylic acid decarboxylase. Mutations of this gene are viable and confer resistance to cinnamic acid. ; GO: 0016831 carboxy-lyase activity.
Probab=99.77  E-value=8.3e-18  Score=134.39  Aligned_cols=157  Identities=24%  Similarity=0.297  Sum_probs=119.4

Q ss_pred             EEEEEEEC-HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCC------HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             69999528-4789999999999998798899985856863069------8999997479758207678877877430011
Q gi|254780622|r    7 KIALIMCG-SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFIT------PLIVGAISNRRVYTHLLSYKEGYESNHIQLA   79 (405)
Q Consensus         7 ~IllgvtG-siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~------~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~   79 (405)
                      ||+|++|| |-.+| ...|+..|+..|+||+.|.|++|...+.      +..++.|-. ++|.+. |......++    +
T Consensus         1 ~ivVa~TGAsGvI~-G~RLL~~Lk~~GvE~~LviS~~A~~tiK~Etd~~~~~v~~LAT-~~Y~~~-D~~a~i~SG----S   73 (181)
T TIGR00421         1 KIVVAITGASGVIY-GIRLLEVLKELGVEVHLVISKWAKKTIKYETDYDPGEVEELAT-KYYDED-DFAAPIASG----S   73 (181)
T ss_pred             CEEEEECCHHHHHH-HHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHH-HHCCHH-HHHHHHCCC----C
T ss_conf             95786222448999-9999999986793687863558999998853899889999967-532611-211000157----8


Q ss_pred             CCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf             44655788411188898852024552146667--5227996898405660000038899999998640001346521255
Q gi|254780622|r   80 NECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAM  157 (405)
Q Consensus        80 ~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~l  157 (405)
                      ..+|.|+|+|||+-|+|-||+|++|||+|..+  +-..++..+++|   ..|-.|-+..||+-+|.+.|..|++|..+.-
T Consensus        74 f~~Dgm~VvPCSmKtLsaIa~G~a~NLitRAADV~LKErRkLvL~~---REtPL~SiHLENmL~L~~~G~IIlPP~PaFY  150 (181)
T TIGR00421        74 FKFDGMVVVPCSMKTLSAIANGYAENLITRAADVALKERRKLVLVP---RETPLNSIHLENMLRLSRMGAIILPPVPAFY  150 (181)
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC---CCCCCCHHHHHHHHHHHHCCCEEECCCCCCC
T ss_conf             6768268864856789999851105568889755422054246403---6788751548999999827925327955444


Q ss_pred             HHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             310322333434558999999986
Q gi|254780622|r  158 AESNGYGVGRMSEPCDIIRQITWL  181 (405)
Q Consensus       158 a~c~~~G~grl~e~~~I~~~~~~~  181 (405)
                              -|=.+.+|+++++-.-
T Consensus       151 --------~rPkS~~Dl~~~~VgR  166 (181)
T TIGR00421       151 --------NRPKSVEDLIDFIVGR  166 (181)
T ss_pred             --------CCCCCHHHHHHHHHHH
T ss_conf             --------7898878898677987


No 18 
>COG0163 UbiX 3-polyprenyl-4-hydroxybenzoate decarboxylase [Coenzyme metabolism]
Probab=99.76  E-value=4.3e-17  Score=129.78  Aligned_cols=156  Identities=20%  Similarity=0.222  Sum_probs=114.4

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCC------------CCCCCCCCCCCCCC
Q ss_conf             556999952847899999999999987988999858568630698999997479------------75820767887787
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNR------------RVYTHLLSYKEGYE   72 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~------------~v~~~~~~~~~~~~   72 (405)
                      .+||++||||..-+.=...|+..|+..|.|+++|+|++|.+-+     ...+|+            .+|.+ .+......
T Consensus         2 ~~riivgisGASG~iygvrlLe~L~~~~~e~hlviS~~a~~~~-----~~E~~~~~~~~~~~~~a~~~~~~-~D~~A~iA   75 (191)
T COG0163           2 MKRIIVGISGASGAIYGVRLLEVLRELGVETHLVISKAAKKTL-----KYETGNDESLGEVLALADVVHDE-KDIGAPIA   75 (191)
T ss_pred             CCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHH-----HHHHCCCHHHHHHHHHCCEECCH-HHCCCCCC
T ss_conf             8279999736642899999999997469569999867899999-----98747631067774201022678-77167655


Q ss_pred             CCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             743001144655788411188898852024552146667--522799689840566000003889999999864000134
Q gi|254780622|r   73 SNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFI  150 (405)
Q Consensus        73 ~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi  150 (405)
                      +.    +...|.|+|+|||+.|+|++|+|++|||++..+  .-..++|.+++|   ..|-.|-+..||+-+|.+.|..|+
T Consensus        76 SG----S~~~~gMiI~PCSmkTla~IA~G~~dnLi~RAAdV~LKErR~LVLv~---REtPl~~ihLeNMlkls~~GaiI~  148 (191)
T COG0163          76 SG----SFRTDGMIIAPCSMKTLAAIAHGFADNLITRAADVALKERRPLVLVP---RETPLSLIHLENMLKLAEMGAIIM  148 (191)
T ss_pred             CC----CCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEE---CCCCCCHHHHHHHHHHHHCCCEEC
T ss_conf             78----87768479994727779999811421489898899886178259996---378854899999999998889865


Q ss_pred             CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             6521255310322333434558999999986
Q gi|254780622|r  151 GPESGAMAESNGYGVGRMSEPCDIIRQITWL  181 (405)
Q Consensus       151 ~P~~g~la~c~~~G~grl~e~~~I~~~~~~~  181 (405)
                      +|..+.-.        |=-..|++++++..-
T Consensus       149 Pp~PaFY~--------kP~sieDlvd~~v~r  171 (191)
T COG0163         149 PPMPAFYH--------KPQSIEDLVDFVVGR  171 (191)
T ss_pred             CCCHHHHC--------CCCCHHHHHHHHHHH
T ss_conf             79706644--------998899999999999


No 19 
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit; InterPro: IPR014214   Members of this entry represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation..
Probab=99.74  E-value=1.8e-17  Score=132.28  Aligned_cols=170  Identities=19%  Similarity=0.316  Sum_probs=122.9

Q ss_pred             CEEEEEEECHHHHHHHH-HHHHHHHHCCCEEEEEECHHHH----HHCCH----HHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             56999952847899999-9999999879889998585686----30698----999997479758207678877877430
Q gi|254780622|r    6 KKIALIMCGSVAVYKSL-DLIRRLRERGAVVIPVMTKSAQ----KFITP----LIVGAISNRRVYTHLLSYKEGYESNHI   76 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~-~l~~~L~~~g~~V~vv~T~~A~----~fi~~----~~l~~lt~~~v~~~~~~~~~~~~~~Hi   76 (405)
                      |||.+|.|||=..|... --+++|+..|+||.+|+|.+-+    ||-.+    .-+|.+||++++..+...++-.+    
T Consensus         1 krIGfglTGSHCt~~~~~p~le~L~~~GAev~P~~s~~V~~T~TrFG~~~dwi~~~E~iTG~~~i~ti~~AEP~GP----   76 (188)
T TIGR02852         1 KRIGFGLTGSHCTLEAVMPQLEKLVEEGAEVTPIVSETVQTTDTRFGDGADWIKKIEEITGKKAINTIVEAEPFGP----   76 (188)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCC----
T ss_conf             9343113620116678989999999669848888630004356556861889999886306311300345545976----


Q ss_pred             CCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHH--CCCCCEEEECCCCCHHHHHHHHHHHHHHH-HHHCCCCCCCC
Q ss_conf             0114465578841118889885202455214666752--27996898405660000038899999998-64000134652
Q gi|254780622|r   77 QLANECDLLVVAPASANFIAHVAHGMVYDLASAILLA--KGDQPVLIAPAMNFMMWAKPATQRNVEIL-QKDGCYFIGPE  153 (405)
Q Consensus        77 ~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la--~~~~pi~iaPaMn~~M~~~p~~~~nl~~L-~~~g~~vi~P~  153 (405)
                        ...-|+|||||||.||+||+||++.|+++...+=|  ++++|||++=+-|...=   ..-+||-.| ...+++||+=.
T Consensus        77 --~~~LD~mviaP~TGNsmsKlANA~tDspVLMAAKA~lRN~~PVvLa~sTNDaLG---lNa~NL~~Ll~~KNIyFvPFG  151 (188)
T TIGR02852        77 --KVPLDVMVIAPLTGNSMSKLANAITDSPVLMAAKATLRNNKPVVLAISTNDALG---LNAVNLMRLLNTKNIYFVPFG  151 (188)
T ss_pred             --CCCCCEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC---HHHHHHHHHHHHCCEEEECCC
T ss_conf             --975336887788621389984215897778877877517897898750345011---328999999751483310477


Q ss_pred             HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf             12553103223334345589999999863101320017977
Q gi|254780622|r  154 SGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKR  194 (405)
Q Consensus       154 ~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~  194 (405)
                      =       |.   -.--|..+++.+.++|...-..-|+|+-
T Consensus       152 Q-------D~---P~~KPnSl~A~~~h~L~~ti~~Al~G~Q  182 (188)
T TIGR02852       152 Q-------DD---PFKKPNSLVAKLDHYLIPTIEEALQGRQ  182 (188)
T ss_pred             C-------CC---CCCCCCCCHHCHHHCCHHHHHHHHCCCC
T ss_conf             7-------78---7764850001223014789999962796


No 20 
>TIGR02700 flavo_MJ0208 archaeoflavoprotein, MJ0208 family; InterPro: IPR014073   This entry describes one of two paralogous families of archaeal flavoprotein. The other, described by IPR014072 from INTERPRO and typified by the partially characterised AF1518 of ArchaArchaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown..
Probab=99.70  E-value=6.8e-17  Score=128.52  Aligned_cols=117  Identities=29%  Similarity=0.472  Sum_probs=92.2

Q ss_pred             EEEEEEECHHH-HHHHHHHHHHHHHC--CCEEEEEECHHHHHHCCHH----HHHHHHCCCCCCCCCC-CCCCCCCCCC--
Q ss_conf             69999528478-99999999999987--9889998585686306989----9999747975820767-8877877430--
Q gi|254780622|r    7 KIALIMCGSVA-VYKSLDLIRRLRER--GAVVIPVMTKSAQKFITPL----IVGAISNRRVYTHLLS-YKEGYESNHI--   76 (405)
Q Consensus         7 ~IllgvtGsia-a~k~~~l~~~L~~~--g~~V~vv~T~~A~~fi~~~----~l~~lt~~~v~~~~~~-~~~~~~~~Hi--   76 (405)
                      ||.+||||.-- -.++..++.+|++.  .+.|...+|++|++.|.--    -|..+|+-.-|.|++- .+++.++|-|  
T Consensus         1 rI~WgITGAgHlL~esfqvmKelk~~~~el~v~t~vSrAgEEVvrMyGL~~~L~~Is~G~yyeE~f~esE~g~SsPi~GR   80 (237)
T TIGR02700         1 RIAWGITGAGHLLDESFQVMKELKRRIEELKVSTYVSRAGEEVVRMYGLFDELVEISNGDYYEEVFLESEEGASSPIVGR   80 (237)
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCC
T ss_conf             90331033567788899999998630866346631001322335411311566621589600201010478888971012


Q ss_pred             -CCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHH--CCCCCEEEECC
Q ss_conf             -0114465578841118889885202455214666752--27996898405
Q gi|254780622|r   77 -QLANECDLLVVAPASANFIAHVAHGMVYDLASAILLA--KGDQPVLIAPA  124 (405)
Q Consensus        77 -~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la--~~~~pi~iaPa  124 (405)
                       .|.+ .|+++|.|||+||+||+||||||+|+|+.+.-  .+..|++|+|.
T Consensus        81 faLgk-YD~LivsPAT~NTVaKia~GIADsLVTNAvaQAgKG~Vpv~vVPv  130 (237)
T TIGR02700        81 FALGK-YDLLIVSPATANTVAKIAYGIADSLVTNAVAQAGKGDVPVLVVPV  130 (237)
T ss_pred             CCCCC-CCEEEECCCCCCCHHHEEECCHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf             32453-265787585102001100021003567677522377543588875


No 21 
>TIGR02699 archaeo_AfpA archaeoflavoprotein AfpA; InterPro: IPR014072   The prototypical member of this archaeal protein family is AF1518 from Archaeoglobus fulgidus. This homodimer with two non-covalently bound FMN cofactors can receive electrons from ferredoxin, but not from a number of other electron donors such as NADH or rubredoxin. It can then donate electrons to various reductases..
Probab=99.65  E-value=2.9e-16  Score=124.49  Aligned_cols=143  Identities=21%  Similarity=0.359  Sum_probs=102.5

Q ss_pred             EEEEEEECHHH-HHHHHHHHHHHHHC-CC--EEEEEECHHHHHHCCHHH-HHHHHCC--CCCCCCCCCCCCCCCCCCCCC
Q ss_conf             69999528478-99999999999987-98--899985856863069899-9997479--758207678877877430011
Q gi|254780622|r    7 KIALIMCGSVA-VYKSLDLIRRLRER-GA--VVIPVMTKSAQKFITPLI-VGAISNR--RVYTHLLSYKEGYESNHIQLA   79 (405)
Q Consensus         7 ~IllgvtGsia-a~k~~~l~~~L~~~-g~--~V~vv~T~~A~~fi~~~~-l~~lt~~--~v~~~~~~~~~~~~~~Hi~l~   79 (405)
                      ||.+|||||-- -.++.+++..+++. |.  +|.|.+|+++...+.-.- +..|..+  .++.|. +.+.+.-.+.++++
T Consensus         1 ~iAWGITGsGd~L~Et~~im~~vK~~y~~rV~~~vfLSK~G~~VvKyY~L~~~L~~~F~~~~Ve~-~ANsPFLaG~lQ~G   79 (176)
T TIGR02699         1 RIAWGITGSGDKLPETVEIMKDVKKKYGDRVEIDVFLSKAGEQVVKYYKLWDKLEEDFDDLRVEI-NANSPFLAGQLQLG   79 (176)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEEE-CCCCCCCCCCCCCC
T ss_conf             90342028998416788888997520598789999860586745316676788863106405870-78678100641346


Q ss_pred             CCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHH--CCCCCEEEECCCCCH------HHHH--------HHHHHHHHHHH
Q ss_conf             4465578841118889885202455214666752--279968984056600------0003--------88999999986
Q gi|254780622|r   80 NECDLLVVAPASANFIAHVAHGMVYDLASAILLA--KGDQPVLIAPAMNFM------MWAK--------PATQRNVEILQ  143 (405)
Q Consensus        80 ~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la--~~~~pi~iaPaMn~~------M~~~--------p~~~~nl~~L~  143 (405)
                      + .|.+|||||||||.||||.||||+|+|+.+.+  .+..||.|.|+=+..      .-++        -.=.+|+++|+
T Consensus        80 ~-YdflLvAPATaNtvAKI~~GIADtLvtNAv~~a~KA~vPvYI~P~D~k~G~V~T~lP~gk~L~L~~r~~DVe~v~kL~  158 (176)
T TIGR02699        80 K-YDFLLVAPATANTVAKIAYGIADTLVTNAVIQALKAKVPVYIMPSDYKEGTVKTALPDGKKLELRMRKVDVENVEKLA  158 (176)
T ss_pred             E-EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEEEECHHHHHHHH
T ss_conf             0-110221554210156444303337899999963168744686278898325898569896168987641202468876


Q ss_pred             H-HCCCCCC
Q ss_conf             4-0001346
Q gi|254780622|r  144 K-DGCYFIG  151 (405)
Q Consensus       144 ~-~g~~vi~  151 (405)
                      + +|+.|++
T Consensus       159 ~Me~i~vL~  167 (176)
T TIGR02699       159 QMEGIEVLE  167 (176)
T ss_pred             HHCCCCCCC
T ss_conf             515711037


No 22 
>COG1036 Archaeal flavoproteins [Energy production and conversion]
Probab=99.57  E-value=1.6e-14  Score=113.20  Aligned_cols=143  Identities=23%  Similarity=0.345  Sum_probs=96.1

Q ss_pred             CCCEEEEEEECHHH-HHHHHHHHHHHHHC--CCEEEEEECHHHHHHCCHH----HHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             85569999528478-99999999999987--9889998585686306989----99997479758207678877877430
Q gi|254780622|r    4 SGKKIALIMCGSVA-VYKSLDLIRRLRER--GAVVIPVMTKSAQKFITPL----IVGAISNRRVYTHLLSYKEGYESNHI   76 (405)
Q Consensus         4 ~~k~IllgvtGsia-a~k~~~l~~~L~~~--g~~V~vv~T~~A~~fi~~~----~l~~lt~~~v~~~~~~~~~~~~~~Hi   76 (405)
                      .++||.+|+||+-- -.++.+++.++++.  +++|.+.+|+++++.+.-.    .++..++. +..|. +.+.+.-...+
T Consensus         7 ~~~rIaWgITGaG~~L~Et~~imk~lk~~~~~~~v~v~lSkageeVvk~YgL~~~l~~~~~~-~~~e~-~ansPfi~Grl   84 (187)
T COG1036           7 KKKRIAWGITGAGHLLPETYQIMKELKKEYGDVEVDVFLSKAGEEVVKMYGLWDKLEKIFGG-LEVEI-GANSPFIAGRL   84 (187)
T ss_pred             CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCC-EEEEC-CCCCCCEECCE
T ss_conf             36158999705530109999999999864588058876223089999999899999987598-67643-89997453110


Q ss_pred             CCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHH-H-CCCCCEEEECCCCCH--------------HHHHHHHHHHHH
Q ss_conf             011446557884111888988520245521466675-2-279968984056600--------------000388999999
Q gi|254780622|r   77 QLANECDLLVVAPASANFIAHVAHGMVYDLASAILL-A-KGDQPVLIAPAMNFM--------------MWAKPATQRNVE  140 (405)
Q Consensus        77 ~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~l-a-~~~~pi~iaPaMn~~--------------M~~~p~~~~nl~  140 (405)
                      ++.+ .|+++|+|||+||.||+|+||||+|+|+.+. | .+..|+.++|.=...              |.-...-.+|.+
T Consensus        85 qlGk-YD~llvaPaTsNTvAKIa~GIADtLVTNAVaqa~Kg~VPvyivP~D~k~G~V~t~~~gGk~~el~vR~vDvenv~  163 (187)
T COG1036          85 QLGK-YDFLLVAPATSNTVAKIAYGIADTLVTNAVAQAGKGKVPVYIVPVDYKEGTVETTLPGGKKLELRVRKVDVENVE  163 (187)
T ss_pred             ECCC-CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCEEEEEEEECCHHHHH
T ss_conf             0253-017998246563189998655789999999996078986899345565775887279995789998622167799


Q ss_pred             HHHHH-CCCC
Q ss_conf             98640-0013
Q gi|254780622|r  141 ILQKD-GCYF  149 (405)
Q Consensus       141 ~L~~~-g~~v  149 (405)
                      +|+.. |+.|
T Consensus       164 kl~~megi~V  173 (187)
T COG1036         164 KLAQMEGIEV  173 (187)
T ss_pred             HHHHCCCEEE
T ss_conf             9984269088


No 23 
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.72  E-value=0.00021  Score=48.19  Aligned_cols=108  Identities=19%  Similarity=0.204  Sum_probs=70.8

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHC
Q ss_conf             01797789840420101021357621577278899999998258838998415667765674675465778999999850
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKA  268 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~  268 (405)
                      +|+||.+|||+|.                +=.|.++|+.|...||+|..+.-.........+..+...-.++..+++.+.
T Consensus         2 dl~gK~alVTGas----------------~GIG~aia~~~a~~Ga~V~~~d~~~~~~~~~~~~~~~~Dv~~~~v~~~~~~   65 (237)
T PRK06550          2 EFMTKTVLVTGAA----------------SGIGLAQARAFLEQGAHVYGVDKSDKPDLSGNFHFIQLDLSSDKLEPLFKV   65 (237)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCEEEEECCCCHHHHHHHHHH
T ss_conf             9899899993747----------------799999999999879999997086124306973899863888999999997


Q ss_pred             C-CCCEEEEEHHHHH-HHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH
Q ss_conf             5-8887997404444-4322221011233455775104552180689887
Q gi|254780622|r  269 L-PVDIAVMVSAVSD-WRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII  316 (405)
Q Consensus       269 ~-~~D~~I~aAAVSD-f~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i  316 (405)
                      + ..|++|.+|.+.+ +.|-.  +  +.-+.....+.+.|.-.--+.+.+
T Consensus        66 ~g~iDiLvNnAGi~~~~~~~~--~--~~~e~w~~~~~vNl~~~~~~~~~~  111 (237)
T PRK06550         66 VPSVDILCNTAGILDDYKPLL--D--TSDEEWQHIFDINLFSTFLLTRAY  111 (237)
T ss_pred             CCCCCEEEECCCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             599979998988899999905--5--999999999999729999999999


No 24 
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.71  E-value=0.00023  Score=47.82  Aligned_cols=81  Identities=22%  Similarity=0.217  Sum_probs=59.3

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE---EEEEHHHHHHHHHHHH
Q ss_conf             1797789840420101021357621577278899999998258838998415667765674---6754657789999998
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNV---MTIHVERAEDMLQEVL  266 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~---~~i~v~t~~em~~~~~  266 (405)
                      |+||.+|||+|+                +-.|.++|+.|...||+|..+.-......+..+   .+-.....+++.+.+.
T Consensus         1 L~~K~alITGas----------------~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~   64 (234)
T PRK07577          1 MSSRTVLVTGAT----------------KGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQIN   64 (234)
T ss_pred             CCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHH
T ss_conf             941989993778----------------8899999999998799999963475447897699995799999999999999


Q ss_pred             HCCCCCEEEEEHHHHHHHHH
Q ss_conf             50588879974044444322
Q gi|254780622|r  267 KALPVDIAVMVSAVSDWRFP  286 (405)
Q Consensus       267 ~~~~~D~~I~aAAVSDf~~~  286 (405)
                      +..+.|++|.+|++..+.+-
T Consensus        65 ~~~~id~LVnnAG~~~~~~~   84 (234)
T PRK07577         65 EIHPVDAIVNNVGIALPQPL   84 (234)
T ss_pred             HHCCCCEEEECCCCCCCCCH
T ss_conf             76999899989988999880


No 25 
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.69  E-value=0.00031  Score=47.07  Aligned_cols=107  Identities=17%  Similarity=0.210  Sum_probs=66.5

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-CCCCEEEE-----EHHHHHH
Q ss_conf             20017977898404201010213576215772788999999982588389984156677-65674675-----4657789
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-DPPNVMTI-----HVERAED  260 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-~~~~~~~i-----~v~t~~e  260 (405)
                      +.+|+||.+|||+|.                +-.|.++|+.+...||+|.+.. ....+ .....+.+     .-+..++
T Consensus         3 ~~~l~~K~alITGgs----------------~GIG~aia~~la~~Ga~V~i~~-r~~~~~~~~~~~~~~~Dv~~~~~v~~   65 (254)
T PRK07856          3 NLDLTGRVVLVTGGT----------------RGVGAGISEAFLAAGATVVVCG-RRAPEVDGRPAEFHACDIRDPDQVAA   65 (254)
T ss_pred             CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEE-CCHHHCCCCCEEEEECCCCCHHHHHH
T ss_conf             423599989994767----------------6899999999998799999997-98557489843999846999999999


Q ss_pred             HHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH
Q ss_conf             9999985058-88799740444443222210112334557751045521806898
Q gi|254780622|r  261 MLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       261 m~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~  314 (405)
                      +.+++.+.+. .|++|..|.+.-+.+....    .-+.....+.+.|.-.--+.+
T Consensus        66 ~~~~~~~~~g~iDilVnNAG~~~~~~~~~~----~~~~~~~~~~vNl~~~~~l~q  116 (254)
T PRK07856         66 LVDAIAERHGRLDVLVNNAGGSPYALAAEA----SPRFHEKIVELNLLAPLLVAQ  116 (254)
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCCCCHHHC----CHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999980998889988988999881349----999999999998289999999


No 26 
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.61  E-value=0.00024  Score=47.70  Aligned_cols=184  Identities=20%  Similarity=0.263  Sum_probs=94.6

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC---------C-CCCCEEEE-----
Q ss_conf             01797789840420101021357621577278899999998258838998415667---------7-65674675-----
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI---------A-DPPNVMTI-----  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~---------~-~~~~~~~i-----  253 (405)
                      +|+||.||||+|                |+-+|.++|+.+..+|++|.+.......         . ....+..+     
T Consensus         2 ~L~gK~vlITGg----------------s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~   65 (247)
T PRK05565          2 KLMGKVAIVTGA----------------SGGIGRAIAELLAKEGAKVVIAYDKNEEAANELLEEIKEVGGDAIAVKADVS   65 (247)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             989988999378----------------4589999999999879989998179989999999999963990899983589


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHH----HHHHHCCCCCCEEEE
Q ss_conf             4657789999998505-88879974044444322221011233455775104552180689----887621489958999
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDIL----KIIGHHQCRPSIVVG  328 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL----~~i~~~k~~~~~lVG  328 (405)
                      +.++.+++.+.+.+.+ +.|++|.+|++..+.+-.  +.  .-+...+.+.+.|.-.--+.    ..+.+++  ...+|-
T Consensus        66 ~~~~~~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~--~~--~~~~~~~~~~~Nl~~~~~~~~~~~~~m~~~~--~G~II~  139 (247)
T PRK05565         66 SEDDVENLVEQIVEKFGKIDILVNNAGISKFGLVT--DM--TDEEWDRVINVNLTGVMRLTRYALPIMIKRG--SGVIVN  139 (247)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEE
T ss_conf             99999999999999809984999899878999915--59--9999999999854789999998579887569--975999


Q ss_pred             EE---CCC---CH---------HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCC---CE-EECC---CCC
Q ss_conf             81---141---23---------899999999974998999920577677777661189998369---85-9727---899
Q gi|254780622|r  329 FA---AET---QC---------IEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPD---KI-EEYP---ELP  386 (405)
Q Consensus       329 Fk---aET---~~---------l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~---~~-~~~~---~~s  386 (405)
                      +.   +..   +.         ++.-++.-..+-+-+=|-.|.|.++  ++.++..+.  +...   .. ...|   ..+
T Consensus       140 isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~e~~~~gIrvN~V~PG--~~~T~~~~~--~~~~~~~~~~~~~p~~R~~~  215 (247)
T PRK05565        140 ISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAIAPG--AIETEMNSS--FSEEDKEGLAEEIPLGRLGE  215 (247)
T ss_pred             ECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC--CCCCCCCCC--CCHHHHHHHHHCCCCCCCCC
T ss_conf             73512257899833889999999999999999954309499999609--895742100--49778999985599889939


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             899999999999
Q gi|254780622|r  387 KAEVADRLCHLI  398 (405)
Q Consensus       387 K~~iA~~Il~~i  398 (405)
                      ..|+|+-+.-.+
T Consensus       216 p~dva~~v~fL~  227 (247)
T PRK05565        216 PEEIAKVVLFLA  227 (247)
T ss_pred             HHHHHHHHHHHH
T ss_conf             999999999996


No 27 
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.60  E-value=0.00064  Score=45.01  Aligned_cols=154  Identities=21%  Similarity=0.244  Sum_probs=83.2

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEH-----HHHHHH
Q ss_conf             200179778984042010102135762157727889999999825883899841566776567467546-----577899
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHV-----ERAEDM  261 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v-----~t~~em  261 (405)
                      +.+|+||.+|||+|                |+-+|.++|+.|...||+|....-.........+..+.+     ...+++
T Consensus         4 ~l~L~gK~alITG~----------------s~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~Dv~~~~~v~~~   67 (260)
T PRK06523          4 DLELAGKRALVTGG----------------TKGIGAATVARFREAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAV   67 (260)
T ss_pred             CCCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHH
T ss_conf             73899998999475----------------76999999999998799999994884013798628998379999999999


Q ss_pred             HHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEEEE---CC-
Q ss_conf             99998505-888799740444443222210112334557751045521806----8988762148995899981---14-
Q gi|254780622|r  262 LQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVGFA---AE-  332 (405)
Q Consensus       262 ~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVGFk---aE-  332 (405)
                      .+++.+.+ ..|++|..|.++-..+...  .++.-+++...+.+.|.-.--    ++..+.+++.  .-+|-+.   +. 
T Consensus        68 v~~~~~~~g~iDiLVnNAG~~~~~~~~~--~~~~~~~w~~~~~~Nl~~~~~~~q~~~p~m~~~~~--G~IinisS~~~~~  143 (260)
T PRK06523         68 ARAVLERLGGVDILVHVLGGSSAPAGGF--AALTDEEWQDELNLNLLAAVRLDRALLPAMIARGS--GVIIHVTSIQRRL  143 (260)
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCEEEEEEHHHCC
T ss_conf             9999997499979998998876799880--31999999999999849999999999999998399--8669995522146


Q ss_pred             --CCHHHHH----------HHHHHHHCCCCEEEEECCCCC
Q ss_conf             --1238999----------999999749989999205776
Q gi|254780622|r  333 --TQCIEQN----------AREKLLNKGADFIVSNCILPD  360 (405)
Q Consensus       333 --T~~l~~~----------A~~Kl~~K~~D~IVAN~i~~~  360 (405)
                        .+....+          .+.--.+-+-+=|-.|.|.++
T Consensus       144 ~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrvN~V~PG  183 (260)
T PRK06523        144 PLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNRVSPG  183 (260)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC
T ss_conf             8886508899999999999999999973439299999648


No 28 
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.60  E-value=0.00049  Score=45.77  Aligned_cols=112  Identities=21%  Similarity=0.212  Sum_probs=68.2

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC----------CCCCCEEEE-----
Q ss_conf             01797789840420101021357621577278899999998258838998415667----------765674675-----
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI----------ADPPNVMTI-----  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~----------~~~~~~~~i-----  253 (405)
                      .|+||.++||+|                |+-.|.++|+++...|++|.+.......          .....+..+     
T Consensus         4 ~LkgK~~lITGa----------------s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   67 (250)
T PRK12825          4 SLSGRVALVTGA----------------ARGIGRAIALRLAAAGADVIVHPPSDEAAAEETVAAVEALGRRAQAVQADVT   67 (250)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf             609788999389----------------5589999999999879989999798878999999999853994899994189


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCC
Q ss_conf             4657789999998505-888799740444443222210112334557751045521806----898876214
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQ  320 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k  320 (405)
                      +.++.+++.+.+.+.+ +.|++|.+|++..+.+-  .+  +.-.+..+.+.+.+.-.--    ++..+.+++
T Consensus        68 ~~~~~~~~~~~~~~~~g~iDilInnAg~~~~~~~--~~--~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~  135 (250)
T PRK12825         68 DAAALEAAVEELVERFGAIDILVNNAGITGDGRL--WE--MSDDEWERVIDVNLTGVFNVLRAVVPPMIEAG  135 (250)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCH--HH--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999999976999899989988999890--23--99999999999851899999999899999749


No 29 
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.58  E-value=0.00023  Score=47.88  Aligned_cols=122  Identities=18%  Similarity=0.156  Sum_probs=71.1

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C--------CCCCCEEEE-----
Q ss_conf             00179778984042010102135762157727889999999825883899841566-7--------765674675-----
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I--------ADPPNVMTI-----  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~--------~~~~~~~~i-----  253 (405)
                      .+|+||.+|||+|                |+-.|.++|+++...|++|.+..-... .        .....+..+     
T Consensus         2 ~~L~gK~alITGg----------------s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dl~   65 (253)
T PRK12826          2 RDLMGRVALVTGA----------------ARGIGRAIAVRFAADGADVIVVDICGQAAAATAELVAAAGGKARAYQVDVR   65 (253)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf             9889988999489----------------778999999999987998999989889999999999850995899995179


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC----HHHHHHHHHCCCCCCEEEE
Q ss_conf             4657789999998505-8887997404444432222101123345577510455218----0689887621489958999
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN----PDILKIIGHHQCRPSIVVG  328 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~----pdIL~~i~~~k~~~~~lVG  328 (405)
                      .-+..+++.+.+.+.+ ..|++|.+|++....+-.  +  +.-++....+.+.|...    .-.+..+.+++....+.|+
T Consensus        66 ~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~--~--~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~is  141 (253)
T PRK12826         66 DRAALKALVAAGVERFGRLDILVANAGIFPLTPFA--E--LDDEDWDRVIDVNLTGTFLLTQAALPALKRAGGGRIVLTS  141 (253)
T ss_pred             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             99999999999999839987899899889999815--5--9999999999987566643378746999976997699995


Q ss_pred             E
Q ss_conf             8
Q gi|254780622|r  329 F  329 (405)
Q Consensus       329 F  329 (405)
                      -
T Consensus       142 S  142 (253)
T PRK12826        142 S  142 (253)
T ss_pred             C
T ss_conf             2


No 30 
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.55  E-value=0.00074  Score=44.59  Aligned_cols=78  Identities=21%  Similarity=0.208  Sum_probs=56.5

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEE-----HHHHHHHHH
Q ss_conf             017977898404201010213576215772788999999982588389984156677656746754-----657789999
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIH-----VERAEDMLQ  263 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~-----v~t~~em~~  263 (405)
                      +|+||.+|||+|.                +=.|.++|+.|...||+|.+..-.........+..+.     -+..+++.+
T Consensus         6 ~L~gKvalVTGgs----------------~GIG~aia~~la~~Ga~V~~~d~~~~~~~~~~~~~~~~Dvt~~~~v~~~v~   69 (266)
T PRK06171          6 NLQGKIIIVTGGS----------------SGIGLAIVEELLAQGANVQMVDIHGGDEKHKGYQFWPTDISSAKEVNHTVA   69 (266)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf             8999979994778----------------789999999999879999999788535058976999816999999999999


Q ss_pred             HHHHCC-CCCEEEEEHHHHH
Q ss_conf             998505-8887997404444
Q gi|254780622|r  264 EVLKAL-PVDIAVMVSAVSD  282 (405)
Q Consensus       264 ~~~~~~-~~D~~I~aAAVSD  282 (405)
                      ++.+.+ ..|++|.+|.+.-
T Consensus        70 ~~~~~~G~iDiLVNNAGi~~   89 (266)
T PRK06171         70 EIIERFGRIDGLVNNAGINF   89 (266)
T ss_pred             HHHHHHCCCCEEEECCCCCC
T ss_conf             99998399889998886676


No 31 
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.53  E-value=0.00022  Score=48.05  Aligned_cols=37  Identities=30%  Similarity=0.366  Sum_probs=19.9

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             001797789840420101021357621577278899999998258838998
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li  238 (405)
                      ..|+||++|||+++              ||--.|++||+.|...||+|.+.
T Consensus         6 g~L~GK~alITGaa--------------g~~GIG~aiA~~la~~GA~V~i~   42 (272)
T PRK08159          6 GLMQGKRGLILGVA--------------NNRSIAWGIAKACRAAGAELAFT   42 (272)
T ss_pred             CCCCCCEEEEECCC--------------CCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             23589999998899--------------98689999999999869999997


No 32 
>PRK07201 short chain dehydrogenase; Provisional
Probab=97.53  E-value=0.0004  Score=46.31  Aligned_cols=185  Identities=23%  Similarity=0.263  Sum_probs=100.9

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC------CC-C--CCEE-----E
Q ss_conf             2001797789840420101021357621577278899999998258838998415667------76-5--6746-----7
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI------AD-P--PNVM-----T  252 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~------~~-~--~~~~-----~  252 (405)
                      +.+|+||.+|||+|               ||| .|.++|+.+.++||.|.++.-....      +. .  ..+.     +
T Consensus       371 ~g~L~GKvalITGA---------------SSG-IG~A~A~~LA~~GA~Vvl~AR~~e~Le~v~~ei~~~Gg~a~~~~~DV  434 (663)
T PRK07201        371 RGPLEGKHVIITGA---------------SSG-IGRATAIKVAEAGATVFALARDGEKLDELVAEIRARGGQAHAYTCDL  434 (663)
T ss_pred             CCCCCCCEEEECCC---------------CCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             88879947999388---------------759-99999999998799899998999999999999995599189999627


Q ss_pred             EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH----HHHHHHHHCCCCCCEEE
Q ss_conf             54657789999998505-88879974044444322221011233455775104552180----68988762148995899
Q gi|254780622|r  253 IHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP----DILKIIGHHQCRPSIVV  327 (405)
Q Consensus       253 i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p----dIL~~i~~~k~~~~~lV  327 (405)
                      -..+..+.+.+++.+.+ ..|++|.+|.++-+++..-...++  .+....+.+.+.-.-    -++..+.+++ . .-+|
T Consensus       435 td~~~v~~lv~~i~~~~G~IDVLVNNAG~si~~~~~~~~d~~--~d~er~m~vN~~G~v~l~~a~lP~M~~r~-~-G~IV  510 (663)
T PRK07201        435 TDSASVEHTVKDILGRHGHVDYLVNNAGRSIRRSVVNSTDRF--HDYERTMQLNYFGAVRLVLGLLPHMRERR-F-GHVV  510 (663)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C-EEEE
T ss_conf             999999999999999679988899896446757501134549--99999999974999999999999888539-9-3999


Q ss_pred             EEE---CCC---------------CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCE-EECCCCCHH
Q ss_conf             981---141---------------2389999999997499899992057767777766118999836985-972789989
Q gi|254780622|r  328 GFA---AET---------------QCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKI-EEYPELPKA  388 (405)
Q Consensus       328 GFk---aET---------------~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~-~~~~~~sK~  388 (405)
                      --+   ...               +..-+.+..-+..+|   |-.|.|...  ..-.     -+|.+... ...|.++-+
T Consensus       511 NISSiag~~~~P~~saYsASKaAl~aftr~La~Ela~~G---VrVttI~PG--~V~T-----pMiapt~~y~~~p~l~pe  580 (663)
T PRK07201        511 NISSIGVQTNAPRFSAYVASKAALDAFARVAASETLSDG---ITFTNIHMP--LVRT-----PMIAPTKRYNPVPTLSPE  580 (663)
T ss_pred             EECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---EEEEEECCC--CCCC-----CCCCCCCCCCCCCCCCHH
T ss_conf             975565477899864999999999999999999837578---289997159--7178-----877875222789989999


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999999999998
Q gi|254780622|r  389 EVADRLCHLIVEH  401 (405)
Q Consensus       389 ~iA~~Il~~i~~~  401 (405)
                      ++|..|++.|+++
T Consensus       581 ~aA~~i~~a~~~~  593 (663)
T PRK07201        581 EAADMVARALVEK  593 (663)
T ss_pred             HHHHHHHHHHHCC
T ss_conf             9999999998518


No 33 
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.51  E-value=0.00017  Score=48.65  Aligned_cols=34  Identities=24%  Similarity=0.394  Sum_probs=20.8

Q ss_pred             CC--CCCCEEEE-EEEC--HHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             98--88556999-9528--478999999999999879889998
Q gi|254780622|r    1 MD--LSGKKIAL-IMCG--SVAVYKSLDLIRRLRERGAVVIPV   38 (405)
Q Consensus         1 m~--l~~k~Ill-gvtG--siaa~k~~~l~~~L~~~g~~V~vv   38 (405)
                      |+  |+||++|+ |.+|  +|.    ..+++.|.++|++|.+.
T Consensus         1 M~g~L~GK~alITGaa~~~GIG----~aiA~~La~~GA~V~i~   39 (271)
T PRK06505          1 MEGLMQGKRGLIMGVANDHSIA----WGIAKQLAAQGAELAFT   39 (271)
T ss_pred             CCCCCCCCEEEEECCCCCCHHH----HHHHHHHHHCCCEEEEE
T ss_conf             9875799979997999985499----99999999869999998


No 34 
>PRK06398 aldose dehydrogenase; Validated
Probab=97.51  E-value=0.00053  Score=45.52  Aligned_cols=120  Identities=18%  Similarity=0.188  Sum_probs=72.2

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEE-----EHHHHHHHH
Q ss_conf             001797789840420101021357621577278899999998258838998415667765674675-----465778999
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTI-----HVERAEDML  262 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i-----~v~t~~em~  262 (405)
                      .+|+||.+|||+|                |+-.|.++|+.|...||+|..+.-.. .........+     .-+..+++.
T Consensus         2 ~~L~gKvalVTGg----------------s~GIG~aia~~la~~Ga~V~~~~~~~-~~~~~~~~~i~~Dvt~~~~v~~~v   64 (256)
T PRK06398          2 RDLRDKVVIVTGG----------------SSGIGLAIVSRFVDEGSKVVSISRSE-PEDINKSDHIKCDVTNEDEVKNAI   64 (256)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCC-CCCCCCCCEEEECCCCHHHHHHHH
T ss_conf             8999898999687----------------87899999999998699999994875-125172238985479999999999


Q ss_pred             HHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHH----HHHHHCCCCCCEEEEEE
Q ss_conf             9998505-88879974044444322221011233455775104552180689----88762148995899981
Q gi|254780622|r  263 QEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDIL----KIIGHHQCRPSIVVGFA  330 (405)
Q Consensus       263 ~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL----~~i~~~k~~~~~lVGFk  330 (405)
                      +++.+.+ ..|++|.+|.+..+.+-.    .+.-..+...+.+.|.-.--..    ..+.++  ...-+|-+.
T Consensus        65 ~~~~~~~G~iDiLVNNAG~~~~~~~~----~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--~~G~IVnis  131 (256)
T PRK06398         65 NEISKKYGRIDVLVNNAGIEKYGSLH----KTDSGTWRRIIDVNVNGVYYMSKEVIPHMLRS--GTGSIVNIS  131 (256)
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEEE
T ss_conf             99999839997999899999999904----49999999999997362899999999999983--995799980


No 35 
>PRK08945 short chain dehydrogenase; Provisional
Probab=97.50  E-value=0.00049  Score=45.75  Aligned_cols=84  Identities=24%  Similarity=0.322  Sum_probs=55.9

Q ss_pred             HCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-------C--CCCCEEE
Q ss_conf             1013200179778984042010102135762157727889999999825883899841566-7-------7--6567467
Q gi|254780622|r  183 YKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-------A--DPPNVMT  252 (405)
Q Consensus       183 ~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-------~--~~~~~~~  252 (405)
                      ++.++..|+||.+|||+|.                +-.|.++|+.+...|++|.++.-... +       .  ..+...+
T Consensus         4 ~~p~~~~L~gK~~lITGas----------------~GIG~aiA~~la~~Ga~Vil~~r~~~~l~~~~~el~~~~~~~~~~   67 (245)
T PRK08945          4 YQPKPDLLKDRIILVTGAG----------------DGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAI   67 (245)
T ss_pred             CCCCCCCCCCCEEEEECCC----------------HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEE
T ss_conf             9999867897989994886----------------189999999999879989999698899999999999747984489


Q ss_pred             E--EH-----HHHHHHHHHHHHCC-CCCEEEEEHHHHH
Q ss_conf             5--46-----57789999998505-8887997404444
Q gi|254780622|r  253 I--HV-----ERAEDMLQEVLKAL-PVDIAVMVSAVSD  282 (405)
Q Consensus       253 i--~v-----~t~~em~~~~~~~~-~~D~~I~aAAVSD  282 (405)
                      +  .+     ...+++.+.+.+.+ ..|++|.+|++..
T Consensus        68 ~~~d~~~~~~~~~~~~~~~i~~~~g~iD~lVnNAG~~~  105 (245)
T PRK08945         68 IPLDLLGATEQNYQDLADTIEEQFGRLDGVLHNAGLLG  105 (245)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf             99446759999999999999998099879998887557


No 36 
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.48  E-value=0.00059  Score=45.24  Aligned_cols=108  Identities=20%  Similarity=0.251  Sum_probs=68.5

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C--------CCCCCEE-----EEE
Q ss_conf             0179778984042010102135762157727889999999825883899841566-7--------7656746-----754
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I--------ADPPNVM-----TIH  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~--------~~~~~~~-----~i~  254 (405)
                      .|+||.++||+|                ||-.|.++|+.+...|++|.++.-... +        .....+.     +-.
T Consensus         2 ~L~~Kv~lITGg----------------s~GIG~a~a~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dl~~   65 (246)
T PRK05653          2 SLQGKTALVTGA----------------SRGIGRAIALRLAADGARVVIYDSNEEAAEALAEELRAAGGEAALLVFDVTD   65 (246)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf             989988999389----------------7589999999999879999999799999999999999659948999972899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH
Q ss_conf             657789999998505-88879974044444322221011233455775104552180689887
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII  316 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i  316 (405)
                      .++.+++.+.+.+.+ +.|++|.+|++....+-.  +  +..++..+.+.+.|.-.-.+.+.+
T Consensus        66 ~~~~~~~~~~~~~~~g~iDilvnnAg~~~~~~~~--~--~~~~~~~~~~~vNl~~~~~~~~~~  124 (246)
T PRK05653         66 EAAVRALIEAAVERFGGLDVLVNNAGITRDALLP--R--MSEEDWDRVIDTNLTGTFNVCRAA  124 (246)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH--H--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999749986999899999998801--3--999999999998608899999999


No 37 
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.42  E-value=0.00069  Score=44.79  Aligned_cols=81  Identities=23%  Similarity=0.286  Sum_probs=58.2

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC------CCCCCCCEEEE-----EHHH
Q ss_conf             017977898404201010213576215772788999999982588389984156------67765674675-----4657
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV------SIADPPNVMTI-----HVER  257 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~------~~~~~~~~~~i-----~v~t  257 (405)
                      .|+||.++||+|.                +=+|.++|+.|...||+|.+..-..      ..+....+..+     ..++
T Consensus         3 rl~gK~~lITGas----------------~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~~~~~~Dv~~~~~   66 (249)
T PRK06500          3 RLQGKTALITGGT----------------SGIGLETARQFAAEGARVAITGRDAATLEAARAELGEDALVIRNDAGSVAA   66 (249)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHHH
T ss_conf             9899889993768----------------789999999999879999999699899999999858975999951799999


Q ss_pred             HHHHHHHHHHCCC-CCEEEEEHHHHHHHH
Q ss_conf             7899999985058-887997404444432
Q gi|254780622|r  258 AEDMLQEVLKALP-VDIAVMVSAVSDWRF  285 (405)
Q Consensus       258 ~~em~~~~~~~~~-~D~~I~aAAVSDf~~  285 (405)
                      .+++.+.+.+.+. .|++|.+|++..+.+
T Consensus        67 ~~~~~~~~~~~~g~iDiLvnnAG~~~~~~   95 (249)
T PRK06500         67 QRALAQALAEAGGRLDAVFINAGVAKFAP   95 (249)
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf             99999999997699989998998789999


No 38 
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.42  E-value=0.0011  Score=43.47  Aligned_cols=33  Identities=36%  Similarity=0.472  Sum_probs=18.5

Q ss_pred             CCCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             9888556999-952847899999999999987988999
Q gi|254780622|r    1 MDLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVIP   37 (405)
Q Consensus         1 m~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~v   37 (405)
                      |+|+||++|+ |-+++|    -..+++.|.+.|++|..
T Consensus         1 ~~L~gK~alVTG~s~GI----G~aia~~la~~GA~V~~   34 (261)
T PRK12428          1 MRLDGKTIVVTGVASGI----GAEVARLLRFLGARVIG   34 (261)
T ss_pred             CCCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEEE
T ss_conf             98999889997857799----99999999986999999


No 39 
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.41  E-value=0.00082  Score=44.32  Aligned_cols=180  Identities=20%  Similarity=0.261  Sum_probs=96.1

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-------CCCCCCEE--EEE---H
Q ss_conf             00179778984042010102135762157727889999999825883899841566-------77656746--754---6
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-------IADPPNVM--TIH---V  255 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-------~~~~~~~~--~i~---v  255 (405)
                      ..|+||.+|||+|                |+-+|.++|+.|...||+|.+..-...       .....+..  ...   .
T Consensus         3 ~~L~gKvalITGa----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~Dvt~~   66 (239)
T PRK12828          3 HSLQGKVVAITGG----------------FGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP   66 (239)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCH
T ss_conf             9969898999472----------------548999999999987998999979877899999875178856999607999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC----HHHHHHHHHCCCCCCEEEEEE
Q ss_conf             57789999998505-8887997404444432222101123345577510455218----068988762148995899981
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN----PDILKIIGHHQCRPSIVVGFA  330 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~----pdIL~~i~~~k~~~~~lVGFk  330 (405)
                      +..+++.+++.+.+ ..|++|.+|.+..+.+-.  +  +.-++..+.+.+.|.-.    .-.+..+.++  ....+|-+.
T Consensus        67 ~~~~~~v~~~~~~~G~iDilVnNAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--~~G~IInis  140 (239)
T PRK12828         67 QAARRAVDEVNRQFGRLDALVNIAGAFVWGTIA--D--GDADTWDRMYGVNVKTTLNASKAALPALTAS--GGGRIVNIG  140 (239)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEEE
T ss_conf             999999999999839997999897789999904--4--9999999999999699999999999999876--998699997


Q ss_pred             CC---CC--HHHHH-------------HHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCC-CCHHHHH
Q ss_conf             14---12--38999-------------999999749989999205776777776611899983698597278-9989999
Q gi|254780622|r  331 AE---TQ--CIEQN-------------AREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPE-LPKAEVA  391 (405)
Q Consensus       331 aE---T~--~l~~~-------------A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~-~sK~~iA  391 (405)
                      -.   ..  ..-.+             ...-+..+   =|=.|.|.++  ++.++.++-.+.  +.  .+.+ .+-+++|
T Consensus       141 S~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~---gIrVN~V~PG--~v~T~~~~~~~~--~~--~~~r~~~p~diA  211 (239)
T PRK12828        141 AGAALKAGPGMGAYAAAKAGVARLTEALAAELLDR---GITVNAVLPS--IIDTPPNRADMP--DA--DFSRWVTPEQIA  211 (239)
T ss_pred             CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---CEEEEEEEEC--CCCCCCHHCCCC--HH--HCCCCCCHHHHH
T ss_conf             77867779996899999999999999999986130---9089999738--788820024185--64--617989999999


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254780622|r  392 DRLCHLI  398 (405)
Q Consensus       392 ~~Il~~i  398 (405)
                      .-++-..
T Consensus       212 ~~v~fL~  218 (239)
T PRK12828        212 AVIAFLL  218 (239)
T ss_pred             HHHHHHH
T ss_conf             9999995


No 40 
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.41  E-value=0.00059  Score=45.26  Aligned_cols=120  Identities=17%  Similarity=0.209  Sum_probs=72.8

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCH-HHHHHHHHHHHCCCCEEEEECCCC----------CCC-CCCEEEE-
Q ss_conf             200179778984042010102135762157727-889999999825883899841566----------776-5674675-
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQ-QGHAIAKSLAYFGAEVILISGPVS----------IAD-PPNVMTI-  253 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk-~G~~iA~~~~~~Ga~V~li~g~~~----------~~~-~~~~~~i-  253 (405)
                      ...|+||++|||+|+                |+ +|.++|+.|.+.||+|.+..-...          ... ...+..+ 
T Consensus        11 ~g~L~gKvalVTGgs----------------g~GIG~a~a~~la~~Ga~V~i~d~~~~~~~e~~~~~~~~~g~~~v~~~~   74 (261)
T PRK07831         11 HGLLAGKVVVVTAAA----------------GTGIGSATARRALEEGADVVISDIHERRLGETADELAAELGLGRVEGVV   74 (261)
T ss_pred             CCCCCCCEEEEECCC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             874699849994999----------------6478999999999879989998087777899999999843877289997


Q ss_pred             ----EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCC
Q ss_conf             ----4657789999998505-888799740444443222210112334557751045521806----8988762148995
Q gi|254780622|r  254 ----HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPS  324 (405)
Q Consensus       254 ----~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~  324 (405)
                          ..+..++|.+.+.+.+ ..|++|..|.+....+..  +  +.-+++...+.+.|.-+--    .+..+.+++ ...
T Consensus        75 ~Dvt~~~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~--e--~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~~-~gG  149 (261)
T PRK07831         75 CDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVV--D--MTDDEWSRVLDVTLTGTFRATRAALRYMRAAP-HGG  149 (261)
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC-CCC
T ss_conf             568999999999999999829986999888668998814--4--99999999861321519999999999999769-997


Q ss_pred             EEE
Q ss_conf             899
Q gi|254780622|r  325 IVV  327 (405)
Q Consensus       325 ~lV  327 (405)
                      .+|
T Consensus       150 ~Ii  152 (261)
T PRK07831        150 VIV  152 (261)
T ss_pred             EEE
T ss_conf             898


No 41 
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.40  E-value=0.00062  Score=45.10  Aligned_cols=184  Identities=20%  Similarity=0.269  Sum_probs=95.0

Q ss_pred             CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C---CCCCEEEE---
Q ss_conf             3200179778984042010102135762157727889999999825883899841566-7-----7---65674675---
Q gi|254780622|r  186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A---DPPNVMTI---  253 (405)
Q Consensus       186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~---~~~~~~~i---  253 (405)
                      .+.+|+||.+|||+|.               || .|.++|+.+...||+|.++.-... +     +   .-..+..+   
T Consensus        34 ~P~dL~GKvaLITGas---------------sG-IG~aiA~~la~~Ga~Vvl~~R~~~~l~~~~~~i~~~g~~~~~~~~D   97 (290)
T PRK05866         34 TPVDLTGKRILLTGAS---------------SG-IGEAAAEKFARRGATVVAVARRKDLLDAVADRITAAGGDAMAIPCD   97 (290)
T ss_pred             CCCCCCCCEEEECCCC---------------CH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             4978999989990813---------------09-9999999999869989999899999999999999649908999778


Q ss_pred             --EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC----HHHHHHHHHCCCCCCEE
Q ss_conf             --4657789999998505-8887997404444432222101123345577510455218----06898876214899589
Q gi|254780622|r  254 --HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN----PDILKIIGHHQCRPSIV  326 (405)
Q Consensus       254 --~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~----pdIL~~i~~~k~~~~~l  326 (405)
                        .-+..+++.+.+.+.+ ..|++|.+|.++...+........  .+....+.+.+.-.    .-.+..+.+++ . ..+
T Consensus        98 vtd~~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~~~--~d~~~~~~vN~~g~~~l~~~~lp~M~~~~-~-G~I  173 (290)
T PRK05866         98 LSDLDAVDALVADVEERIGGVDILINNAGRSIRRPLAESLDRW--HDVERTMVLNYYAPLRLIRGLAPGMIERG-D-GHI  173 (290)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C-CEE
T ss_conf             8989999999999999859988899757666787422215779--99999999983999999987509999669-9-649


Q ss_pred             EEEE---CCCC----------------HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC-EEECCCCC
Q ss_conf             9981---1412----------------38999999999749989999205776777776611899983698-59727899
Q gi|254780622|r  327 VGFA---AETQ----------------CIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDK-IEEYPELP  386 (405)
Q Consensus       327 VGFk---aET~----------------~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~-~~~~~~~s  386 (405)
                      |-.+   +...                .+-+....-+..+|   |=.|.|..+  +..++.     +.+.. ....+.++
T Consensus       174 VnisS~~~~~~~~p~~~~Y~ASKaAl~~lt~sLa~El~~~g---IrVn~V~PG--~V~Tpm-----~a~~~~~~~~~~~~  243 (290)
T PRK05866        174 INVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRG---VHSTTLYYP--LVATPM-----IAPTKAYDGLPALT  243 (290)
T ss_pred             EEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC---EEEEEEECC--CCCCCC-----CCCCCCCCCCCCCC
T ss_conf             99927243278898864189999999999999999852619---699999768--898756-----79887767888899


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             8999999999999
Q gi|254780622|r  387 KAEVADRLCHLIV  399 (405)
Q Consensus       387 K~~iA~~Il~~i~  399 (405)
                      -+++|++|++-+.
T Consensus       244 pe~~A~~iv~a~~  256 (290)
T PRK05866        244 ADEAAEWMVTAAR  256 (290)
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999999999984


No 42 
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=97.37  E-value=0.00081  Score=44.34  Aligned_cols=78  Identities=17%  Similarity=0.270  Sum_probs=49.1

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC---------CCCCCCEE--EE---
Q ss_conf             00179778984042010102135762157727889999999825883899841566---------77656746--75---
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS---------IADPPNVM--TI---  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~---------~~~~~~~~--~i---  253 (405)
                      .+|+||.+|||+|                |+-.|.++|+.|...||+|.+.+....         +....+++  .+   
T Consensus         4 ~~L~gK~alVTGg----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~g~~~~~~~~D   67 (260)
T PRK08416          4 NEMKGKTLVISGG----------------TRGIGKAIVYEFAQSGVNIAFTYNSNVEEADKIAQDLEKKYGIKARAYPLN   67 (260)
T ss_pred             CCCCCCEEEEECC----------------CHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             7789998999673----------------409999999999987999999859988999999999988419836999778


Q ss_pred             --EHHHHHHHHHHHHHCCC-CCEEEEEHHHH
Q ss_conf             --46577899999985058-88799740444
Q gi|254780622|r  254 --HVERAEDMLQEVLKALP-VDIAVMVSAVS  281 (405)
Q Consensus       254 --~v~t~~em~~~~~~~~~-~D~~I~aAAVS  281 (405)
                        +.+..+++.+.+.+.+. .|++|..|.++
T Consensus        68 v~~~~~~~~~~~~i~~~~g~iDilVnnA~i~   98 (260)
T PRK08416         68 ILEPETYKELFKKIDADFDRVDFFISNAIIS   98 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEECCEEC
T ss_conf             8999999999999999819978998643422


No 43 
>PRK09242 tropinone reductase; Provisional
Probab=97.37  E-value=0.00091  Score=44.04  Aligned_cols=160  Identities=19%  Similarity=0.236  Sum_probs=86.4

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCE--EEE---
Q ss_conf             00179778984042010102135762157727889999999825883899841566--------77-65674--675---
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNV--MTI---  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~--~~i---  253 (405)
                      -.|+||++|||+|                |+-.|.++|+.+...||+|.++.-...        +. ..++.  ..+   
T Consensus         6 f~L~gK~alITGg----------------s~GIG~a~a~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   69 (258)
T PRK09242          6 WRLDGQTALITGA----------------SKGIGLAIARELLGLGADVLIVARDADALAQARDELAEEFPERELHGLAAD   69 (258)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf             6379999999484----------------868999999999987998999969889999999999864479729999930


Q ss_pred             --EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH----HHHHCCCCCCEE
Q ss_conf             --4657789999998505-888799740444443222210112334557751045521806898----876214899589
Q gi|254780622|r  254 --HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK----IIGHHQCRPSIV  326 (405)
Q Consensus       254 --~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~----~i~~~k~~~~~l  326 (405)
                        .-++.+++.+++.+.+ ..|++|.+|.+....+.  .  ++.-+...+.+.+.|.-.--+.+    .+.++  ....+
T Consensus        70 v~~~~~~~~~~~~~~~~~g~iDiLVnnAG~~~~~~~--~--~~s~~~w~~~~~vNl~~~~~l~~~~~p~m~~~--~~G~I  143 (258)
T PRK09242         70 VSDDEDRRAILDWVEDHWDGLHILVNNAGGNITKAA--I--DYTEDEWRGIFETNLFSAFELSRYAYPLLKRH--AASSI  143 (258)
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC--C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEE
T ss_conf             799999999999999974999799989988999980--0--19999999999998199999999999999975--99279


Q ss_pred             EEEEC---CC--CHHHHH----------HHHHHHHCCCCEEEEECCCCCCCCCCCCCEEE
Q ss_conf             99811---41--238999----------99999974998999920577677777661189
Q gi|254780622|r  327 VGFAA---ET--QCIEQN----------AREKLLNKGADFIVSNCILPDTGFVGKEWNKV  371 (405)
Q Consensus       327 VGFka---ET--~~l~~~----------A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v  371 (405)
                      |-+.-   ..  .....+          .+.--.+-+-+=|-.|-|.++  ++.++.++.
T Consensus       144 InisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG--~i~T~~~~~  201 (258)
T PRK09242        144 VNIGSVSGLTHVRSGAPYGMTKAALQQMTRNLAVEWAEDGIRVNAVAPW--YIRTRRTSG  201 (258)
T ss_pred             EEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC--CCCCHHHHC
T ss_conf             9993042116898755679999999999999999980279899998358--898721202


No 44 
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.35  E-value=0.00038  Score=46.44  Aligned_cols=107  Identities=27%  Similarity=0.298  Sum_probs=66.5

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCCCEEEE-----
Q ss_conf             017977898404201010213576215772788999999982588389984156677----------65674675-----
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA----------DPPNVMTI-----  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~----------~~~~~~~i-----  253 (405)
                      +|+||.+|||+|                |+-.|.++|+.+...|++|.+........          ....+..+     
T Consensus         2 ~L~gK~~lITGg----------------s~GIG~aia~~la~~G~~Vii~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlt   65 (248)
T PRK05557          2 SLEGKVALVTGA----------------SRGIGRAIAERLAAQGANVVLNYASSEAGAEALVAEIGALGGKALAVQGDVA   65 (248)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             679988999489----------------7689999999999879989999698565899999999963995899990389


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH
Q ss_conf             4657789999998505-8887997404444432222101123345577510455218068988
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI  315 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~  315 (405)
                      .-...++|.+.+.+.. +.|++|.+|++....+-.    ++.-....+.+.+.+.-.--+.+.
T Consensus        66 ~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~----~~~~~~~~~~~~vN~~~~~~~~~~  124 (248)
T PRK05557         66 DAESIERAVDEAKAEFGGVDILVNNAGITRDNLLM----RMKEEDWDRVIDTNLTGVFNLTKA  124 (248)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999829971999899779999915----599999999998783049999999


No 45 
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.35  E-value=0.00054  Score=45.49  Aligned_cols=108  Identities=19%  Similarity=0.232  Sum_probs=62.9

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CCCCCCEEE-----EEHHHHHHH
Q ss_conf             00179778984042010102135762157727889999999825883899841566-776567467-----546577899
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IADPPNVMT-----IHVERAEDM  261 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~~~~~~~~-----i~v~t~~em  261 (405)
                      ..|+||.+|||+|.                +-.|.++|+.+...|++|..+.-... +.....+..     -+.+..+++
T Consensus         4 ~~l~gK~alITG~s----------------~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~Dv~~~~~v~~~   67 (253)
T PRK08220          4 MDFSGKTVWVTGAA----------------QGIGYAVALAFVEAGAKVIGFDQAFEQLNEQYPFATFVLDVADAAAVAQV   67 (253)
T ss_pred             CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEEEEECCCHHHHHHH
T ss_conf             89999989995885----------------68999999999987999999978877874899779999737999999999


Q ss_pred             HHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH
Q ss_conf             99998505-8887997404444432222101123345577510455218068988
Q gi|254780622|r  262 LQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI  315 (405)
Q Consensus       262 ~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~  315 (405)
                      .+++.+.+ +.|++|.+|.+..+.+-.  +  +.-+.....+.+.|.-.--+.+.
T Consensus        68 ~~~~~~~~g~iDilVnnAG~~~~~~~~--~--~~~~~~~~~~~vNl~~~~~~~~~  118 (253)
T PRK08220         68 CQRLLAETGPLDVLVNVAGVLRMGATD--S--LSDEDWQQTFAVNAGGVFNLSRA  118 (253)
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999739988899899878999804--4--99999999999974638999999


No 46 
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.35  E-value=0.00048  Score=45.83  Aligned_cols=108  Identities=18%  Similarity=0.291  Sum_probs=66.4

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC------CCCCE-------EEEE
Q ss_conf             0179778984042010102135762157727889999999825883899841566-77------65674-------6754
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA------DPPNV-------MTIH  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~------~~~~~-------~~i~  254 (405)
                      +|+||.+|||+|+.                -.|.++|+.+...||+|.+..-... .+      ...+.       ++-.
T Consensus         6 ~L~gK~alVTG~~~----------------GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dvtd   69 (254)
T PRK08085          6 SLAGKNILITGSAQ----------------GIGFLLATGLAEYGAEIIINDITAERAEKAVAKLRQEGIKAHAAAFNVTH   69 (254)
T ss_pred             CCCCCEEEEECCCC----------------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             89999899968567----------------89999999999869999999698899999999998449818999826899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH
Q ss_conf             657789999998505-88879974044444322221011233455775104552180689887
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII  316 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i  316 (405)
                      .++.+.+.+++.+.+ +.|++|.+|.+....|-.    .+.-+.....+.+.|.-.--+.+.+
T Consensus        70 ~~~v~~~v~~~~~~~G~iDilVnNAG~~~~~~~~----~~~~e~w~~~~~vNl~g~f~~~q~~  128 (254)
T PRK08085         70 KQEIEAAIEHIEKDIGPIDVLINNAGIQRRHPFT----EFPEQEWNDVIAVNQTAVFLVSQAV  128 (254)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999839986999898678887701----0989999999999849999999998


No 47 
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.34  E-value=0.0011  Score=43.57  Aligned_cols=34  Identities=26%  Similarity=0.334  Sum_probs=19.3

Q ss_pred             CCCCCCEEEE-EEECH--HHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             9888556999-95284--78999999999999879889998
Q gi|254780622|r    1 MDLSGKKIAL-IMCGS--VAVYKSLDLIRRLRERGAVVIPV   38 (405)
Q Consensus         1 m~l~~k~Ill-gvtGs--iaa~k~~~l~~~L~~~g~~V~vv   38 (405)
                      |+|+||++|+ |.+|+  |.    ..+++.|.+.|++|.+.
T Consensus         2 ~~L~GK~alVTGaa~g~GIG----~aiA~~la~~Ga~V~i~   38 (254)
T PRK07533          2 MPLAGKRGLVVGIANEQSIA----WGCARAFRALGAELAVT   38 (254)
T ss_pred             CCCCCCEEEEECCCCCCHHH----HHHHHHHHHCCCEEEEE
T ss_conf             98999989996888980899----99999999879999998


No 48 
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.33  E-value=0.00088  Score=44.12  Aligned_cols=104  Identities=24%  Similarity=0.186  Sum_probs=64.9

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCCCEEE-----EE
Q ss_conf             17977898404201010213576215772788999999982588389984156677----------6567467-----54
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA----------DPPNVMT-----IH  254 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~----------~~~~~~~-----i~  254 (405)
                      |+||.+|||+|                |+-.|.++|++|.+.||+|.+.++.....          ....+..     -+
T Consensus         2 L~gKvalVTGa----------------s~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~d   65 (250)
T PRK08063          2 FSGKVALVTGS----------------SRGIGKAIALRLAKEGYDIAINYARSRKAAEETANEIEQLGRKALVVKANVGD   65 (250)
T ss_pred             CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             89498999587----------------66999999999998899899975999899999999999549958999847999


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHH
Q ss_conf             657789999998505-88879974044444322221011233455775104552180689
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDIL  313 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL  313 (405)
                      .++.+++.+++.+.+ +.|++|.+|+...++|-.  +  +.-......+.+.|...--+.
T Consensus        66 ~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~--~--~~~~~~~~~~~vNl~~~~~~~  121 (250)
T PRK08063         66 VEKIKEMFSQIDEHFGRLDVFVNNAASGVLRPAM--E--LEESHWDWTMNINAKALLFCA  121 (250)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999809988999878567889926--6--999999999987403799999


No 49 
>PRK06196 oxidoreductase; Provisional
Probab=97.32  E-value=0.00073  Score=44.65  Aligned_cols=77  Identities=27%  Similarity=0.356  Sum_probs=37.5

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCCEEEE-----EHHHH
Q ss_conf             0179778984042010102135762157727889999999825883899841566-----7765674675-----46577
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-----IADPPNVMTI-----HVERA  258 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-----~~~~~~~~~i-----~v~t~  258 (405)
                      +|.||.++||+|               +|| .|++.|+++..+||.|++..-...     .....++..+     ...+.
T Consensus        23 dL~GK~~vITGa---------------~sG-IG~~tA~~La~~Ga~Vil~~R~~~k~~~a~~~i~~~~~~~lDLs~~~sV   86 (316)
T PRK06196         23 DLSGKTAIVTGG---------------YSG-LGLETTRALAQAGAHVVVPARRPDAAREALAGIDGVEVVALDLADLASV   86 (316)
T ss_pred             CCCCCEEEECCC---------------CCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEECCCCCHHHH
T ss_conf             999998999179---------------967-9999999999789989999499999999998741785798368899999


Q ss_pred             HHHHHHHHHCC-CCCEEEEEHHHH
Q ss_conf             89999998505-888799740444
Q gi|254780622|r  259 EDMLQEVLKAL-PVDIAVMVSAVS  281 (405)
Q Consensus       259 ~em~~~~~~~~-~~D~~I~aAAVS  281 (405)
                      .+..+++.+.. +.|++|..|.|-
T Consensus        87 r~~a~~~~~~~~~lDvLInNAGi~  110 (316)
T PRK06196         87 RAFAERFLDSGRRIDILINNAGVM  110 (316)
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             999999997579832999578767


No 50 
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.32  E-value=0.00053  Score=45.52  Aligned_cols=80  Identities=26%  Similarity=0.281  Sum_probs=37.3

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC----------CCCCC-E-----EE
Q ss_conf             01797789840420101021357621577278899999998258838998415667----------76567-4-----67
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI----------ADPPN-V-----MT  252 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~----------~~~~~-~-----~~  252 (405)
                      +|+||++|||+++              ++.=.|.++|+.+...||+|.+.+-+...          ....+ .     .+
T Consensus         4 ~L~GK~alVTGaa--------------g~~GiG~aia~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   69 (259)
T PRK07370          4 DLTGKKALVTGIA--------------NNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCNV   69 (259)
T ss_pred             CCCCCEEEEECCC--------------CCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             9999989997989--------------98579999999999869999999478701358999999984128648999128


Q ss_pred             EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHH
Q ss_conf             54657789999998505-8887997404444
Q gi|254780622|r  253 IHVERAEDMLQEVLKAL-PVDIAVMVSAVSD  282 (405)
Q Consensus       253 i~v~t~~em~~~~~~~~-~~D~~I~aAAVSD  282 (405)
                      -.-...+++.+++.+.+ ..|++|.+|+.+.
T Consensus        70 s~~~~v~~~~~~~~~~~G~iDilVnna~~~~  100 (259)
T PRK07370         70 QDDAQIEEVFETIKQKWGQLDILVHCLAFAG  100 (259)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             9999999999999998589877986301146


No 51 
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.29  E-value=0.001  Score=43.64  Aligned_cols=100  Identities=16%  Similarity=0.200  Sum_probs=65.6

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---------CCCCEEE-------
Q ss_conf             017977898404201010213576215772788999999982588389984156677---------6567467-------
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---------DPPNVMT-------  252 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---------~~~~~~~-------  252 (405)
                      +|+||.+|||+|                ++-.|.++|+.+...||+|.+... .+..         ...+.+.       
T Consensus         4 ~L~gKvalVTGa----------------~~GIG~aia~~la~~Ga~V~i~~~-~~~~~~~~~~~~~~~~g~~~~~~~~Dv   66 (261)
T PRK08936          4 DLEGKVVVITGG----------------STGLGRAMAVRFGKEKAKVVINYR-SDESEANDVAEEIKKVGGEAIAVKGDV   66 (261)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             899998999684----------------778999999999987999999728-987899999999996599389998279


Q ss_pred             EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
Q ss_conf             54657789999998505-8887997404444432222101123345577510455218
Q gi|254780622|r  253 IHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN  309 (405)
Q Consensus       253 i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~  309 (405)
                      -+-++.+++.+++.+.+ +.|++|.+|++....+..    ++........+.+.|.-.
T Consensus        67 ~~~~~v~~~v~~~~~~~G~iDiLVNNAg~~~~~~~~----~~~~e~w~~~~~iNl~~~  120 (261)
T PRK08936         67 TVESDVVNLIQSAVKEFGTLDVMINNAGIENAVPSH----EMPLEDWNKVINTNLTGA  120 (261)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHH
T ss_conf             999999999999999829988999899789998813----399999999999971649


No 52 
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.27  E-value=0.0013  Score=43.09  Aligned_cols=39  Identities=36%  Similarity=0.433  Sum_probs=23.5

Q ss_pred             CCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHH
Q ss_conf             888556999-95284789999999999998798899985856863
Q gi|254780622|r    2 DLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQK   45 (405)
Q Consensus         2 ~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~   45 (405)
                      +|.||.+++ |.|.+|    ..+.++.|.++|+.|.+. .++.++
T Consensus        11 dL~GK~~vITGa~sGI----G~~~a~~La~~Ga~Vil~-~R~~~k   50 (314)
T PRK05854         11 DLSGKLAVVTGASSGL----GFGLARRLAAAGADVILP-VRNRAK   50 (314)
T ss_pred             CCCCCEEEECCCCCHH----HHHHHHHHHHCCCEEEEE-ECCHHH
T ss_conf             9999989990688299----999999999784989999-799999


No 53 
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.27  E-value=0.0014  Score=42.76  Aligned_cols=183  Identities=16%  Similarity=0.197  Sum_probs=94.6

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC------CCCCE-------EEEE
Q ss_conf             0179778984042010102135762157727889999999825883899841566-77------65674-------6754
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA------DPPNV-------MTIH  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~------~~~~~-------~~i~  254 (405)
                      .|+||.+|||+|.                +=.|.++|+.|.++|++|.++.-... ++      .-.+.       .+-.
T Consensus         3 sL~gKvalITGas----------------~GIG~aiA~~la~~Ga~V~l~~r~~~~l~~~~~~i~~~g~~~~~~~~Dvtd   66 (238)
T PRK07666          3 SLQGKNALITGAG----------------RGIGRAVAIALAKEGVNVGLLARSEENLKAVAKEVEAEGVKAVIATADVSD   66 (238)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf             9999989991637----------------789999999999879989999899999999999999559927999930799


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH----HHHHHHHHCCCCCCEEEEE
Q ss_conf             657789999998505-88879974044444322221011233455775104552180----6898876214899589998
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP----DILKIIGHHQCRPSIVVGF  329 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p----dIL~~i~~~k~~~~~lVGF  329 (405)
                      .+..+++.+++.+.+ ..|++|..|.+..+.+-.  +.  .-++....+.+.|.-.-    -++..+.+++  ...+|-.
T Consensus        67 ~~~v~~~v~~~~~~~G~iDiLVNNAGi~~~~~~~--~~--~~e~~~~~~~vNl~g~~~~~~~~lp~M~~~~--~G~IIni  140 (238)
T PRK07666         67 YEEVTTAIETLKNGLGSIDILINNAGISKFGKFL--EL--DVAEWEKIIQVNLMGVYYVTRAVLPSMIEQQ--SGDIINI  140 (238)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEEE
T ss_conf             9999999999999819987899847457999823--39--9999999998962999999999999999749--9589998


Q ss_pred             E------CCCC------------HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHH
Q ss_conf             1------1412------------389999999997499899992057767777766118999836985972789989999
Q gi|254780622|r  330 A------AETQ------------CIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVA  391 (405)
Q Consensus       330 k------aET~------------~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA  391 (405)
                      +      ....            .+-+....-+..+|   |=.|.|.++  +..++...-.-+ .++... ..+.=+++|
T Consensus       141 sS~ag~~~~~~~~~Y~aSK~av~glt~~la~El~~~g---IrVn~v~PG--~v~T~m~~~~~~-~~~~~~-~~~~PedVA  213 (238)
T PRK07666        141 SSTAGQKGAPVTSAYSASKFAVLGLTESLMMEVRKHN---IRVTALTPS--TVATDMAVDLGL-TDGNPD-KVMQPEDLA  213 (238)
T ss_pred             CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC---EEEEEEEEC--CCCCCCCCCCCC-CCCCCC-CCCCHHHHH
T ss_conf             7777706799980699999999999999999854139---699999858--898624678777-878830-257999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254780622|r  392 DRLCHLIVE  400 (405)
Q Consensus       392 ~~Il~~i~~  400 (405)
                      +.++..+..
T Consensus       214 ~~vv~~l~~  222 (238)
T PRK07666        214 EFIVAQLKL  222 (238)
T ss_pred             HHHHHHHCC
T ss_conf             999999839


No 54 
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.26  E-value=0.0014  Score=42.87  Aligned_cols=81  Identities=22%  Similarity=0.349  Sum_probs=55.5

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC------CCCCCCCEEEE-----EHHH
Q ss_conf             017977898404201010213576215772788999999982588389984156------67765674675-----4657
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV------SIADPPNVMTI-----HVER  257 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~------~~~~~~~~~~i-----~v~t  257 (405)
                      .|+||.+|||+|+                +-+|.++|+.+...||+|.++.-..      .......+..+     ..++
T Consensus         2 ~L~gKvalITGgs----------------~GIG~aia~~~a~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~   65 (262)
T TIGR03325         2 RLKGEVVLVTGGA----------------SGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDD   65 (262)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCHHH
T ss_conf             9899889990678----------------789999999999879999999899899999998679967999845799999


Q ss_pred             HHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             789999998505-8887997404444432
Q gi|254780622|r  258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      .+++.+++.+.+ +.|++|..|.+.+|.-
T Consensus        66 ~~~~v~~~~~~~G~iDiLVnNAG~~~~~~   94 (262)
T TIGR03325        66 HKEAVARCVAAFGKIDCLIPNAGIWDYST   94 (262)
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             99999999998499888997265168776


No 55 
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.24  E-value=0.0012  Score=43.26  Aligned_cols=31  Identities=29%  Similarity=0.425  Sum_probs=13.6

Q ss_pred             CCCCEEEE-EEEC--HHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             88556999-9528--47899999999999987988999
Q gi|254780622|r    3 LSGKKIAL-IMCG--SVAVYKSLDLIRRLRERGAVVIP   37 (405)
Q Consensus         3 l~~k~Ill-gvtG--siaa~k~~~l~~~L~~~g~~V~v   37 (405)
                      |+||++|+ |.++  +|+.    .+++.|.+.|++|.+
T Consensus         4 L~GK~alVTGaa~~~GiG~----aiA~~la~~GA~V~i   37 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAY----GIAQAMHREGAELAF   37 (262)
T ss_pred             CCCCEEEEECCCCCCHHHH----HHHHHHHHCCCEEEE
T ss_conf             8998799989999725999----999999987999999


No 56 
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.23  E-value=0.0011  Score=43.58  Aligned_cols=188  Identities=19%  Similarity=0.197  Sum_probs=94.6

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC---------CC-CCCCE-----EEE
Q ss_conf             0179778984042010102135762157727889999999825883899841566---------77-65674-----675
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS---------IA-DPPNV-----MTI  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~---------~~-~~~~~-----~~i  253 (405)
                      +|+||.++||+|.                +-.|.++|+.+...||+|.+..+.-.         ++ .....     .+-
T Consensus         3 ~l~gKvalITGga----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   66 (254)
T PRK12746          3 NLDGKVALVTGAS----------------RGIGRAIAMRLANDGALVAIHYGRNKAAADETIREIESNGGKAFLIEADLN   66 (254)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             9999889994847----------------689999999999879999996599989999999999855992899975779


Q ss_pred             EHHHHHHHHHHHHHCC-------CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEE
Q ss_conf             4657789999998505-------888799740444443222210112334557751045521806898876214899589
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-------PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIV  326 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-------~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~l  326 (405)
                      ..+..++|.+++.+.+       +.|++|.+|++....+-.  +.  ..+.....+.+.|.-.--+.+...+.-....-+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~g~g~iDiLVnnAg~~~~~~~~--~~--~~~~~~~~~~vNl~~~f~~~k~~~p~m~~~G~I  142 (254)
T PRK12746         67 SIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIE--NT--TEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRV  142 (254)
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHH--HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf             99999999999999986641689851899799788999914--49--999999999985346899999999998616966


Q ss_pred             EEEEC---CCC--HHHHH-----HHHHH-----HHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC---E-EE--CCC-
Q ss_conf             99811---412--38999-----99999-----9749989999205776777776611899983698---5-97--278-
Q gi|254780622|r  327 VGFAA---ETQ--CIEQN-----AREKL-----LNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDK---I-EE--YPE-  384 (405)
Q Consensus       327 VGFka---ET~--~l~~~-----A~~Kl-----~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~---~-~~--~~~-  384 (405)
                      |-+.-   ...  ....+     |..-|     .+-+-+-|=.|-|.++  ++.++.++-.+-+++-   . ..  +++ 
T Consensus       143 VnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~e~a~~gIrVNaVaPG--~i~T~~~~~~~~~~~~~~~~~~~~~lgR~  220 (254)
T PRK12746        143 INISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPG--YTKTDINAKLLDDPEIRNFATNSSVFGRI  220 (254)
T ss_pred             EEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC--CCCCHHHHHCCCCHHHHHHHHHCCCCCCC
T ss_conf             9992432335788737789999999999999999965139899998789--89863343304999999999727997897


Q ss_pred             CCHHHHHHHHHHHH
Q ss_conf             99899999999999
Q gi|254780622|r  385 LPKAEVADRLCHLI  398 (405)
Q Consensus       385 ~sK~~iA~~Il~~i  398 (405)
                      .+-+|+|.-++-..
T Consensus       221 g~p~dia~~v~FL~  234 (254)
T PRK12746        221 GQVEDIADAVAFLA  234 (254)
T ss_pred             CCHHHHHHHHHHHH
T ss_conf             59999999999995


No 57 
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.23  E-value=0.00057  Score=45.33  Aligned_cols=81  Identities=19%  Similarity=0.195  Sum_probs=41.0

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCH-HHHHHHHHHHHCCCCEEEEECCCC-C--------CCC-C---CEEEEE
Q ss_conf             0179778984042010102135762157727-889999999825883899841566-7--------765-6---746754
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQ-QGHAIAKSLAYFGAEVILISGPVS-I--------ADP-P---NVMTIH  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk-~G~~iA~~~~~~Ga~V~li~g~~~-~--------~~~-~---~~~~i~  254 (405)
                      .|+||++|||+|+               +|. .|++||+.+...||+|.+..-.-. .        ... .   .+.+-+
T Consensus         5 ~L~GK~alVTGaa---------------~g~Gig~aia~~~~~~Ga~V~i~~~~~~~~~~~~~l~~~~g~~~~~~~Dvt~   69 (260)
T PRK06603          5 LLQGKKGLITGIA---------------NNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN   69 (260)
T ss_pred             CCCCCEEEEECCC---------------CCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             6899989998999---------------9668999999999987999999668679999999999843837698657999


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHH
Q ss_conf             657789999998505-888799740444443
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWR  284 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~  284 (405)
                      -++.+++.+++.+.+ ..|++|..|++.+..
T Consensus        70 ~~~v~~~~~~~~~~~G~iDiLVnnag~~~~~  100 (260)
T PRK06603         70 PKSISNLFDDIKEKWGSFDFLLHGMAFADKN  100 (260)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf             9999999999999869977899644237776


No 58 
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.22  E-value=0.0013  Score=43.01  Aligned_cols=107  Identities=23%  Similarity=0.208  Sum_probs=62.7

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC---------CC-CCCCEEEE--EH--
Q ss_conf             179778984042010102135762157727889999999825883899841566---------77-65674675--46--
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS---------IA-DPPNVMTI--HV--  255 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~---------~~-~~~~~~~i--~v--  255 (405)
                      |+||.+|||+|               |+| .|.++|+.|...||+|.+-...-.         +. .......+  .+  
T Consensus         1 L~gKvalITGg---------------s~G-IG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~   64 (249)
T PRK06077          1 LKDKVVVVTGS---------------GRG-IGRAIAVRLAKEGAKVVVNAKKRAEEMNETLRMVKEYGGEGIGVLADVST   64 (249)
T ss_pred             CCCCEEEEECC---------------CCH-HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             96198999263---------------678-99999999998799899984887689999999999759958999847999


Q ss_pred             -HHHHHHHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH
Q ss_conf             -577899999985058-8879974044444322221011233455775104552180689887
Q gi|254780622|r  256 -ERAEDMLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII  316 (405)
Q Consensus       256 -~t~~em~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i  316 (405)
                       +..+++.+++.+.+. .|++|..|.+..+.+-.  +  +.-+.....+.+.|.-.--+.+..
T Consensus        65 ~~~v~~~~~~~~~~~g~iDiLVnNAG~~~~~~~~--~--~~~~~~~~~~~vN~~~~~~~~~~~  123 (249)
T PRK06077         65 REGCRTLAKAALDNFGVVDILVNNAGLGLFSPFL--N--ADDRLIEKHISTDLKSVIYCSQEA  123 (249)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC--C--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999819988899857757887501--0--999999999988621899999999


No 59 
>PRK12744 short chain dehydrogenase; Provisional
Probab=97.22  E-value=0.0011  Score=43.44  Aligned_cols=112  Identities=20%  Similarity=0.219  Sum_probs=66.2

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-----------CCCCEEE---
Q ss_conf             20017977898404201010213576215772788999999982588389984156677-----------6567467---
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-----------DPPNVMT---  252 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-----------~~~~~~~---  252 (405)
                      +..|+||.+|||+|.                +-.|.++|+.+...||+|.+++-.....           ...+.+.   
T Consensus         3 ~~~L~gKvalVTGgs----------------~GIG~aiA~~la~~Ga~vv~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   66 (257)
T PRK12744          3 DHSLKGKVVLIAGGA----------------KNLGGLIARDLAAQGAKAVAIHYNSAATKADAEETVAAVKAAGAKAVAF   66 (257)
T ss_pred             CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf             999899989992887----------------5899999999998799899993787436899999999999739928999


Q ss_pred             ----EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH
Q ss_conf             ----54657789999998505-8887997404444432222101123345577510455218068988762
Q gi|254780622|r  253 ----IHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH  318 (405)
Q Consensus       253 ----i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~  318 (405)
                          -.-.+.+++.+++.+.+ ..|++|.+|......+-.  +  +.-.+....+.+.+.-.--+.+...+
T Consensus        67 ~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~--~--~~~~~~~~~~~vN~~~~~~~~~~~~~  133 (257)
T PRK12744         67 QADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIV--E--ISEAEYDEMFAVNSKSAFFFIKEAGR  133 (257)
T ss_pred             ECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             7688999999999999999809988999766445677233--3--22888888988887669999999999


No 60 
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.21  E-value=0.002  Score=41.88  Aligned_cols=35  Identities=29%  Similarity=0.389  Sum_probs=20.8

Q ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             98885569999528478999999999999879889998
Q gi|254780622|r    1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPV   38 (405)
Q Consensus         1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv   38 (405)
                      |+|+||+++  |||+-+-+ ...+++.|.++|+.|-.+
T Consensus         1 M~l~~K~vl--ITGassGI-G~a~A~~la~~G~~vil~   35 (262)
T PRK09072          1 MDLKDKRVL--LTGASGGI-GEALAEALCAAGARLLLV   35 (262)
T ss_pred             CCCCCCEEE--EECCCCHH-HHHHHHHHHHCCCEEEEE
T ss_conf             998998899--94862399-999999999879989999


No 61 
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.21  E-value=0.0016  Score=42.42  Aligned_cols=39  Identities=21%  Similarity=0.328  Sum_probs=21.2

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH
Q ss_conf             8885569999528478999999999999879889998585686
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ   44 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~   44 (405)
                      +|.||.++  |||+-+-+ ..+.++.|.++|+.|.+.- ++.+
T Consensus        13 DL~GK~~l--ITGa~sGI-G~~~A~~La~~ga~Vil~~-R~~~   51 (306)
T PRK06197         13 DQSGRVAV--VTGANTGL-GYETAAALAAKGAHVVLAV-RNLD   51 (306)
T ss_pred             CCCCCEEE--ECCCCCHH-HHHHHHHHHHCCCEEEEEE-CCHH
T ss_conf             98999999--91689599-9999999997849899997-9899


No 62 
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.20  E-value=0.00053  Score=45.53  Aligned_cols=35  Identities=26%  Similarity=0.267  Sum_probs=23.5

Q ss_pred             CCCCCCEEEE-EEEC--HHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             9888556999-9528--4789999999999998798899985
Q gi|254780622|r    1 MDLSGKKIAL-IMCG--SVAVYKSLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus         1 m~l~~k~Ill-gvtG--siaa~k~~~l~~~L~~~g~~V~vv~   39 (405)
                      |.|+||++|+ |.+|  +|.    ..+++.|.+.|++|-+.-
T Consensus         1 M~L~GK~alITGaag~~GIG----~aiA~~la~~GA~V~i~~   38 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIA----YGIAKACFEQGAELAFTY   38 (274)
T ss_pred             CCCCCCEEEEECCCCCCHHH----HHHHHHHHHCCCEEEEEE
T ss_conf             92899879998999983799----999999998699999984


No 63 
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.20  E-value=0.0015  Score=42.62  Aligned_cols=121  Identities=22%  Similarity=0.279  Sum_probs=71.0

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-------C-C--CCEEEE-----
Q ss_conf             017977898404201010213576215772788999999982588389984156677-------6-5--674675-----
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-------D-P--PNVMTI-----  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-------~-~--~~~~~i-----  253 (405)
                      .|+||.+|||+|.               +| .|.++|+.|.+.||+|.++.+.....       . -  ..+..+     
T Consensus         3 ~L~gK~alVTGas---------------~G-IG~aiA~~la~~Ga~vv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~   66 (268)
T PRK06198          3 RLDGKIALVTGGT---------------QG-LGAAIARLFAERGAAGLVICGRSAEKGEAKAAELEALGAKAVFVQADLA   66 (268)
T ss_pred             CCCCCEEEEECCC---------------CH-HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             8899889995857---------------78-9999999999879938999629888999999999954996799982689


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEE
Q ss_conf             4657789999998505-888799740444443222210112334557751045521806----89887621489958999
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVG  328 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVG  328 (405)
                      ..+..+.+.+++.+.+ ..|++|.+|.+.+..+..  +.  .-+.....+.+.|.-.--    .+..+.+++.+ .-+|-
T Consensus        67 ~~~~v~~~~~~~~~~fG~iDiLVNnAG~~~~~~~~--~~--~~e~w~~~~~vNl~~~~~~~~~~~~~m~~~~~~-G~IVn  141 (268)
T PRK06198         67 KVEDCRAVVAAADEAFGRLDALVNAAGLTDRGTIL--DT--SPELFDRMFAVNVRAPFFLMQEAIKLMRRRRAE-GTIVN  141 (268)
T ss_pred             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEE
T ss_conf             99999999999999839998999899789999826--59--999999999987269999999999999975999-27999


Q ss_pred             EE
Q ss_conf             81
Q gi|254780622|r  329 FA  330 (405)
Q Consensus       329 Fk  330 (405)
                      +.
T Consensus       142 is  143 (268)
T PRK06198        142 IG  143 (268)
T ss_pred             EE
T ss_conf             91


No 64 
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.19  E-value=0.0019  Score=41.95  Aligned_cols=80  Identities=19%  Similarity=0.284  Sum_probs=53.1

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE-----EHHH
Q ss_conf             0179778984042010102135762157727889999999825883899841566------7765674675-----4657
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI-----HVER  257 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i-----~v~t  257 (405)
                      .|+||.+|||+|                |+-.|.++|+.|...||+|.++.-...      ...+..+..+     ..++
T Consensus         3 ~L~gK~alVTGa----------------s~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~   66 (263)
T PRK06200          3 WLTGQVALITGG----------------GSGIGRALVERFLAEGARVAVLERSAEKCASLRQRFGDDVLVVEGDVTSYAD   66 (263)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCHHH
T ss_conf             717288999586----------------6799999999999879999999799999999999818864687179999999


Q ss_pred             HHHHHHHHHHCC-CCCEEEEEHHHHHHH
Q ss_conf             789999998505-888799740444443
Q gi|254780622|r  258 AEDMLQEVLKAL-PVDIAVMVSAVSDWR  284 (405)
Q Consensus       258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~  284 (405)
                      .+++.+.+.+.+ +.|++|.+|.+.++.
T Consensus        67 ~~~~~~~~~~~~G~iDiLVnnAG~~~~~   94 (263)
T PRK06200         67 NQRAVAQTVDRFGKLDCFVGNAGIWDYY   94 (263)
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf             9999999999849988899757546777


No 65 
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.17  E-value=0.0023  Score=41.46  Aligned_cols=78  Identities=24%  Similarity=0.324  Sum_probs=46.9

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-----CC--CCCCEEEE-----EHH
Q ss_conf             0179778984042010102135762157727889999999825883899841566-----77--65674675-----465
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-----IA--DPPNVMTI-----HVE  256 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-----~~--~~~~~~~i-----~v~  256 (405)
                      +|+||.+|||+|                |+-.|.++|+.+...|++|.+..-...     ..  ....+..+     +-+
T Consensus         3 ~l~gK~alITGg----------------s~GIG~aia~~la~~G~~V~i~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   66 (250)
T PRK07231          3 RLEGKVAIVTGA----------------GSGFGEGIARRFAAEGARVVVTDRNQEAAERVAAEIRGGRAIAVAADVSDEA   66 (250)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHH
T ss_conf             769988999388----------------8689999999999879999999798899999999844996799993079999


Q ss_pred             HHHHHHHHHHHCC-CCCEEEEEHHHHH
Q ss_conf             7789999998505-8887997404444
Q gi|254780622|r  257 RAEDMLQEVLKAL-PVDIAVMVSAVSD  282 (405)
Q Consensus       257 t~~em~~~~~~~~-~~D~~I~aAAVSD  282 (405)
                      ..+++.+.+.+.+ ..|++|.+|++..
T Consensus        67 ~~~~~~~~~~~~~g~iD~lInnAG~~~   93 (250)
T PRK07231         67 DVRAAVEAALERFGSVDILVNNAGTTH   93 (250)
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf             999999999998199719998883378


No 66 
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.16  E-value=0.002  Score=41.82  Aligned_cols=79  Identities=34%  Similarity=0.393  Sum_probs=54.5

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------C-CCCCCEEEE-----E
Q ss_conf             0179778984042010102135762157727889999999825883899841566--------7-765674675-----4
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------I-ADPPNVMTI-----H  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~-~~~~~~~~i-----~  254 (405)
                      +|+||.+|||+|                |+-.|.++|+.+...|++|.+..-...        + ........+     .
T Consensus         5 ~L~gKvalITGa----------------s~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~   68 (252)
T PRK07035          5 DLTGKIALVTGA----------------SRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE   68 (252)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             678998999588----------------7499999999999879989999798899999999999649957999824899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHH
Q ss_conf             657789999998505-88879974044444
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDW  283 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf  283 (405)
                      .++.+++.+.+.+.+ ..|++|.+|+...+
T Consensus        69 ~~~v~~~~~~~~~~~G~iDilVnnAg~~~~   98 (252)
T PRK07035         69 MEQIDALFAQIRERHGRLDILVNNAAANPY   98 (252)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             999999999999982997789876855888


No 67 
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.16  E-value=0.002  Score=41.81  Aligned_cols=162  Identities=20%  Similarity=0.184  Sum_probs=86.4

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC--------CCCCEEE-----E
Q ss_conf             00179778984042010102135762157727889999999825883899841566-77--------6567467-----5
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA--------DPPNVMT-----I  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~--------~~~~~~~-----i  253 (405)
                      -+|+||.+|||+|                |+-.|.++|+.+...||+|.+..-... ++        ....+..     -
T Consensus        10 ~~L~gK~alITGg----------------s~GIG~~ia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~   73 (259)
T PRK06124         10 FSLAGQVALVTGS----------------ARGLGLEIARALAEAGAHVLVNGRNAARVEAAVAALRAAGGAAEALVFDIS   73 (259)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             0999998999286----------------748999999999987999999969889999999999965995899995179


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH----HHHHHHCCCCCCEEEE
Q ss_conf             4657789999998505-8887997404444432222101123345577510455218068----9887621489958999
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI----LKIIGHHQCRPSIVVG  328 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI----L~~i~~~k~~~~~lVG  328 (405)
                      +.++.+++.+++.+.+ ..|++|.+|...+..+-..    +.-++....+.+.|.-.--+    +..+.+++  ...+|-
T Consensus        74 ~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~----~~~e~~~~~~~~Nl~g~~~~~q~~~~~M~~~~--~G~IIn  147 (259)
T PRK06124         74 DEEAVAAAFARIDAEHGRLDILVNNVGARNRRPLAE----LDDAEIRALLETDLVAPILLSRLAAQRMVRQG--YGRIIA  147 (259)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHH----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEE
T ss_conf             999999999999997599979998988899999066----99999999999984999999999999987769--936999


Q ss_pred             EE---CCC--CHHHHH-----HHHHH-----HHCCCCEEEEECCCCCCCCCCCCCEEEEE
Q ss_conf             81---141--238999-----99999-----97499899992057767777766118999
Q gi|254780622|r  329 FA---AET--QCIEQN-----AREKL-----LNKGADFIVSNCILPDTGFVGKEWNKVSI  373 (405)
Q Consensus       329 Fk---aET--~~l~~~-----A~~Kl-----~~K~~D~IVAN~i~~~~~~fgsd~n~v~l  373 (405)
                      ..   +..  ...-.+     |..-|     .+-+-+=|-.|.|.++  ++-++.++-+.
T Consensus       148 isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG--~i~T~~~~~~~  205 (259)
T PRK06124        148 ITSIAGEVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPG--YFATETNAAMA  205 (259)
T ss_pred             ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC--CCCCCCHHHHC
T ss_conf             72330046799837899999999999999999965139799999758--89773221112


No 68 
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.16  E-value=0.0015  Score=42.58  Aligned_cols=80  Identities=29%  Similarity=0.310  Sum_probs=53.4

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEEEE-----EH
Q ss_conf             179778984042010102135762157727889999999825883899841566--------77-65674675-----46
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVMTI-----HV  255 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~~i-----~v  255 (405)
                      |+||.+|||+|                |+-.|.++|+.+...||+|.+..-...        +. ....+..+     .-
T Consensus         2 L~gK~alITGa----------------s~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~   65 (258)
T PRK12429          2 LKGKTALVTGA----------------ASGIGLEIALALAKEGAKVVIADLNDEAAAKAAEAIKKAGGKAIGVAMDVTDE   65 (258)
T ss_pred             CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf             89598999488----------------75899999999998799999997988999999999984499189998358999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             57789999998505-8887997404444432
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      ...+++.+.+.+.+ ..|++|.+|.+....+
T Consensus        66 ~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~   96 (258)
T PRK12429         66 EAINAGIDKVVETFGGVDILVNNAGIQHVAP   96 (258)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             9999999999998299709998998889988


No 69 
>PRK12742 oxidoreductase; Provisional
Probab=97.15  E-value=0.0018  Score=42.19  Aligned_cols=81  Identities=23%  Similarity=0.299  Sum_probs=37.4

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----CCCCCEEEEE--HHHHHHH
Q ss_conf             01797789840420101021357621577278899999998258838998415667-----7656746754--6577899
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----ADPPNVMTIH--VERAEDM  261 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----~~~~~~~~i~--v~t~~em  261 (405)
                      .|+||++|||+|                |+-.|.++|+.|...||+|.+.+.....     ....+...+.  +...+.+
T Consensus         3 ~l~gK~alITGa----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~   66 (237)
T PRK12742          3 AFTGKSVLVLGG----------------SRGIGAAIVRRFVTDGANVVFTYAGSKDAAERLAAETGATAVFTDSADRDAV   66 (237)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCEEEEECCCCHHHH
T ss_conf             989998999278----------------8799999999999879999997799989999998863982899354589999


Q ss_pred             HHHHHHCCCCCEEEEEHHHHHHHH
Q ss_conf             999985058887997404444432
Q gi|254780622|r  262 LQEVLKALPVDIAVMVSAVSDWRF  285 (405)
Q Consensus       262 ~~~~~~~~~~D~~I~aAAVSDf~~  285 (405)
                      .+.+.+.-+.|++|.+|++..|.+
T Consensus        67 ~~~~~~~g~iD~lVnnAg~~~~~~   90 (237)
T PRK12742         67 IDVVRKSGPLDILVVNAGIALFGD   90 (237)
T ss_pred             HHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             999998699989998997789998


No 70 
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.14  E-value=0.0023  Score=41.46  Aligned_cols=79  Identities=27%  Similarity=0.254  Sum_probs=41.8

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC-C------CCCCCCEEEE--EH---H
Q ss_conf             017977898404201010213576215772788999999982588389984156-6------7765674675--46---5
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV-S------IADPPNVMTI--HV---E  256 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~-~------~~~~~~~~~i--~v---~  256 (405)
                      .|+||++|||+|.              ++.=.|+++|+.+...||+|.+..-.- .      ...+.....+  .+   +
T Consensus         4 ~L~GK~~lVTG~~--------------~~~GIG~a~A~~la~~GA~Vvi~~~~~~~~~~~~~~~~~~~~~~i~~Dv~~~~   69 (256)
T PRK07889          4 LLEGKRILVTGVI--------------TDSSIAFHIARVAQEQGAEVVLTGFRRLRLTERIAKRLPEPAPVLELDVTNEE   69 (256)
T ss_pred             CCCCCEEEEECCC--------------CCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCHH
T ss_conf             1499979998998--------------85689999999999879999998389358999999865888759994288999


Q ss_pred             HHHHHHHHHHHCC-CCCEEEEEHHHH
Q ss_conf             7789999998505-888799740444
Q gi|254780622|r  257 RAEDMLQEVLKAL-PVDIAVMVSAVS  281 (405)
Q Consensus       257 t~~em~~~~~~~~-~~D~~I~aAAVS  281 (405)
                      ..+++.+++.+.+ ..|++|++|++.
T Consensus        70 ~v~~~~~~~~~~~G~lD~lVnnag~~   95 (256)
T PRK07889         70 HLASLADRVREHIGGLDGVVHSIGFA   95 (256)
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             99999999999868978797421347


No 71 
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.14  E-value=0.0025  Score=41.24  Aligned_cols=121  Identities=19%  Similarity=0.211  Sum_probs=67.7

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC------CCCCCCCEEE-----EEHHH
Q ss_conf             017977898404201010213576215772788999999982588389984156------6776567467-----54657
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV------SIADPPNVMT-----IHVER  257 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~------~~~~~~~~~~-----i~v~t  257 (405)
                      .|+||.+|||+|+                +-.|.++|+.|...||+|.+..-..      ..........     -.-+.
T Consensus         2 rL~gKvalVTGas----------------~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~   65 (256)
T PRK07067          2 RLQGKVALLTGAA----------------SGIGEAVAQRYLREGARVVLADIKPARAALAALEIGPAAVAVSLDVTRQDS   65 (256)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHHH
T ss_conf             9899889993767----------------789999999999879999999798899999999819975999984899999


Q ss_pred             HHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEEEE
Q ss_conf             789999998505-888799740444443222210112334557751045521806----8988762148995899981
Q gi|254780622|r  258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVGFA  330 (405)
Q Consensus       258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVGFk  330 (405)
                      .+++.+++.+.+ ..|++|.+|.+.++.+-..    +..+.....+.+.|.-.--    .+..+.++. ....+|-++
T Consensus        66 v~~~v~~~~~~~G~iDiLVNNAGi~~~~~~~~----~~~e~~~~~~~vNl~g~f~~~~~~~~~m~~~~-~~G~IVnis  138 (256)
T PRK07067         66 IDRIVAAAVERFGGIDILVNNAALFDMAPILE----ISRDVYDRLFAVNVKGLFFLMQAVAQHMVEQG-RGGKIINMA  138 (256)
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHH----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEE
T ss_conf             99999999998199989998998899988134----99999999999851778999999999999808-995599984


No 72 
>PRK06484 short chain dehydrogenase; Validated
Probab=97.13  E-value=0.0096  Score=37.44  Aligned_cols=148  Identities=18%  Similarity=0.252  Sum_probs=86.3

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-EE-----------------------CCEEEEECCC
Q ss_conf             32233343455899999998631013200179778984042010-10-----------------------2135762157
Q gi|254780622|r  161 NGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-PL-----------------------DPMRYIANRS  216 (405)
Q Consensus       161 ~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-~I-----------------------D~VR~ItN~S  216 (405)
                      ...=.||+.+||+|...+..+.. ....+..|..+.|-+|=+.- +.                       ..|=.||--+
T Consensus       205 ~~iPlgR~g~PeeiA~~v~FLaS-d~asyITG~~i~VDGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kGKvalVTGaa  283 (530)
T PRK06484        205 GRIPMGRLARPDEIAEAVHFLAS-AQASYITGSTLVVDGGWDAYNQSGKAHTAQMPHPGAEFMRPVPVRAGRVVCVTGGA  283 (530)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHCC-HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCC
T ss_conf             17998887899999999999768-33258889879983893153788876644467855651577767789899992876


Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCC-------CCCCCCE----EEEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHH-
Q ss_conf             727889999999825883899841566-------7765674----6754657789999998505-88879974044444-
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILISGPVS-------IADPPNV----MTIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDW-  283 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li~g~~~-------~~~~~~~----~~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf-  283 (405)
                      +| .|.++|+.+...||+|.+..-...       ......+    .+-+-+..+.|.+++.+.+ ..|++|..|.+.+. 
T Consensus       284 ~G-IG~aiA~~la~~GA~Vvi~d~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~v~~~~~~fG~iDiLVNNAGi~~~~  362 (530)
T PRK06484        284 SG-IGAAIADRFAALGDRVAIIDSDGEEAVKLREILGGEHLSWQVDITDEASVESAFAGIQGRLGPLDVLVNNAGIAEPF  362 (530)
T ss_pred             CH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf             78-99999999998879899995888999999997399736999538999999999999999829988999897789899


Q ss_pred             HHHHHHHCCCCCCCCCCCCEEEEEECHHHHH
Q ss_conf             3222210112334557751045521806898
Q gi|254780622|r  284 RFPKIAGTKIKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       284 ~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~  314 (405)
                      .+-.  +  .........+.+.|.-+--..+
T Consensus       363 ~~~~--e--~t~e~w~~v~~vNl~g~f~~~~  389 (530)
T PRK06484        363 APSA--E--QSLEDFRRTIDVNLKGAFHCSR  389 (530)
T ss_pred             CCCC--C--CCHHHHHHHHHHHHHHHHHHHH
T ss_conf             9800--0--9999999999997199999999


No 73 
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.13  E-value=0.0018  Score=42.06  Aligned_cols=101  Identities=22%  Similarity=0.293  Sum_probs=60.7

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C-CCCC--EEEE-----E
Q ss_conf             0179778984042010102135762157727889999999825883899841566-7-----7-6567--4675-----4
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A-DPPN--VMTI-----H  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~-~~~~--~~~i-----~  254 (405)
                      +|+||.+|||+|+.                -.|.++|+.|...||+|.+..-... +     + ...+  +..+     +
T Consensus         6 ~L~gKvalVTGas~----------------GIG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~ei~~~g~~~~~~~~Dvt~   69 (253)
T PRK05867          6 DLHGKRALITGAST----------------GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ   69 (253)
T ss_pred             CCCCCEEEEECCCC----------------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             88999899979565----------------99999999999869999999798899999999998459919999836999


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
Q ss_conf             657789999998505-8887997404444432222101123345577510455218
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN  309 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~  309 (405)
                      -++.+++.+++.+.+ ..|++|.+|.+....+-.  +  +.-++....+.+.|.-.
T Consensus        70 ~~~v~~~v~~~~~~~G~iDiLVnNAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~  121 (253)
T PRK05867         70 HQQVTSMLDQVTAELGGIDIAVCNAGIITVTPML--D--MPLEEFQRLQNTNVTGV  121 (253)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC--C--CCHHHHHHHHHHHHHHH
T ss_conf             9999999999999959985999899778887501--0--99999999999975999


No 74 
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.12  E-value=0.0024  Score=41.32  Aligned_cols=79  Identities=22%  Similarity=0.347  Sum_probs=42.4

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--------CCCCCEEEE--EH---
Q ss_conf             01797789840420101021357621577278899999998258838998415667--------765674675--46---
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--------ADPPNVMTI--HV---  255 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--------~~~~~~~~i--~v---  255 (405)
                      .|+||.+|||+|                |+-.|.++|+.|.+.|++|.+..-.-..        .....+..+  .+   
T Consensus         5 ~l~gKvalITGa----------------s~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   68 (260)
T PRK12823          5 RFAGKVAVVTGA----------------AQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELVAAGGEALALTADLETY   68 (260)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf             879998999488----------------6789999999999879999999694689999999985499489998126885


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHH
Q ss_conf             57789999998505-88879974044444
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDW  283 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf  283 (405)
                      +..+++.+.+.+.+ +.|++|..|+.+-+
T Consensus        69 ~~~~~~~~~~~~~~G~iDiLVnnag~~~~   97 (260)
T PRK12823         69 AGAQAVMAAAVEAFGRIDVLINNVGGTIW   97 (260)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             89999999999983998799977522457


No 75 
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.12  E-value=0.0028  Score=40.88  Aligned_cols=82  Identities=22%  Similarity=0.302  Sum_probs=43.7

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE--EH---H
Q ss_conf             00179778984042010102135762157727889999999825883899841566------7765674675--46---5
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI--HV---E  256 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i--~v---~  256 (405)
                      .+|+||.+|||+|.                +=.|.++|+.+..+||+|.++.-...      .+....+..+  .|   +
T Consensus         5 ~~L~gKvalITGas----------------sGIG~aiA~~la~~Ga~Vvl~dr~~~~l~~~~~~lg~~~~~~~~DVtd~~   68 (296)
T PRK05872          5 TSLDGKVVFVTGAA----------------RGVGAELARRLHARGAKVALVDLEEAELAALAAELGDRVLTVVADVTDLA   68 (296)
T ss_pred             CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHH
T ss_conf             88599879992710----------------58999999999987998999989999999999983887389998279999


Q ss_pred             HHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             7789999998505-8887997404444432
Q gi|254780622|r  257 RAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       257 t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      ..+++.+++.+.+ ..|++|.+|.++.+.+
T Consensus        69 ~v~~~v~~i~~~~G~iDiLVnNAGi~~~~~   98 (296)
T PRK05872         69 AMQAAAEEAVERFGGIDVVVANAGIASYGS   98 (296)
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             999999999997199878765562579976


No 76 
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.12  E-value=0.0025  Score=41.17  Aligned_cols=77  Identities=22%  Similarity=0.226  Sum_probs=42.4

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-------C-CCCCEEEE-----E
Q ss_conf             0179778984042010102135762157727889999999825883899841566-7-------7-65674675-----4
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-------A-DPPNVMTI-----H  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-------~-~~~~~~~i-----~  254 (405)
                      +|+||.+|||+|.                +-.|.++|+.+...|++|.+..-... +       . ....+..+     +
T Consensus         2 ~L~gK~~lITGas----------------~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dv~~   65 (253)
T PRK08217          2 DLKDKVIVITGGA----------------QGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAQCAALGGEAEVYAANVTD   65 (253)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             7899889994887----------------789999999999879989999799999999999999659948999824799


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHH
Q ss_conf             657789999998505-888799740444
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVS  281 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVS  281 (405)
                      .+..+++.+.+.+.+ ..|++|.+|++.
T Consensus        66 ~~~v~~~~~~~~~~~g~iD~lVnNAGi~   93 (253)
T PRK08217         66 EEDVEATFAQIAEDFGQLNGLINNAGIL   93 (253)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             9999999999999839985999857436


No 77 
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.11  E-value=0.0027  Score=40.95  Aligned_cols=122  Identities=25%  Similarity=0.242  Sum_probs=72.6

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEE-----EEEH
Q ss_conf             200179778984042010102135762157727889999999825883899841566------77656746-----7546
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVM-----TIHV  255 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~-----~i~v  255 (405)
                      +-+|+||.+|||+|+                +=.|.++|+.|...||+|.+..-...      ......+.     +-.-
T Consensus        10 ~~~l~gKvalVTGas----------------~GIG~aiA~~la~~Ga~V~i~d~~~~~~~~~~~~~~~~~~~~~~Dvt~~   73 (255)
T PRK06841         10 AFDLSGKVAVVTGGA----------------SGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDS   73 (255)
T ss_pred             CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCH
T ss_conf             758999999997967----------------7899999999998799999996987899999984599669999846999


Q ss_pred             HHHHHHHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEEEE
Q ss_conf             577899999985058-88799740444443222210112334557751045521806----8988762148995899981
Q gi|254780622|r  256 ERAEDMLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVGFA  330 (405)
Q Consensus       256 ~t~~em~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVGFk  330 (405)
                      +..+++.+++.+.+. .|++|.+|.+..+.+-.    ++.-.++...+.+.|.-.--    .+..+.+++  ..-+|-++
T Consensus        74 ~~v~~~v~~~~~~~g~iDiLVNNAGi~~~~~~~----~~~~e~w~~~~~vNl~g~f~~~~~~~~~m~~~~--~G~IInis  147 (255)
T PRK06841         74 QSVEAAVAAAISAFGRIDILVNSAGVALLAPAE----DVSEADWDKTIDINLKGSFLMAQAVGRHMIAAG--GGKIVNLA  147 (255)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEEEE
T ss_conf             999999999999819987999899789999804----499999999999855999999999999999829--96599994


No 78 
>PRK08264 short chain dehydrogenase; Validated
Probab=97.10  E-value=0.0042  Score=39.76  Aligned_cols=80  Identities=24%  Similarity=0.250  Sum_probs=48.8

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC-CCCCCCCEEEE--EHHHHHHHHHHH
Q ss_conf             017977898404201010213576215772788999999982588389984156-67765674675--465778999999
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV-SIADPPNVMTI--HVERAEDMLQEV  265 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~-~~~~~~~~~~i--~v~t~~em~~~~  265 (405)
                      +|+||.+|||+|                |+=.|.++|+++..+|+.+.++.... .....+++..+  .+...++..+..
T Consensus         2 ~l~gK~alITGa----------------ssGIG~aiA~~la~~Ga~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~   65 (235)
T PRK08264          2 DIKGKVVLVTGA----------------NRGIGRAFVEELLARGAAKVYAAARDPESVDLPRVVPLQLDVTDPASVAAAA   65 (235)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCEEEEEECCCCHHHHHHHH
T ss_conf             279988999267----------------5499999999999869977999727840355598799980689999999999


Q ss_pred             HHCCCCCEEEEEHHHHHHH
Q ss_conf             8505888799740444443
Q gi|254780622|r  266 LKALPVDIAVMVSAVSDWR  284 (405)
Q Consensus       266 ~~~~~~D~~I~aAAVSDf~  284 (405)
                      .+..+.|++|.+|.+..+.
T Consensus        66 ~~~~~idvlVnNAGi~~~~   84 (235)
T PRK08264         66 EQASDVTILINNAGISRPG   84 (235)
T ss_pred             HHCCCCCEEEECCCCCCCC
T ss_conf             9739986999888557789


No 79 
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.09  E-value=0.0025  Score=41.19  Aligned_cols=77  Identities=25%  Similarity=0.265  Sum_probs=50.2

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-------CCCCCCEE--EE-----E
Q ss_conf             0179778984042010102135762157727889999999825883899841566-------77656746--75-----4
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-------IADPPNVM--TI-----H  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-------~~~~~~~~--~i-----~  254 (405)
                      +|+||.+|||+|                |+-.|.++|+.+.+.|++|.+..-...       .-...+.+  .+     .
T Consensus         3 ~L~gK~alVTGg----------------s~GiG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~   66 (250)
T PRK07774          3 DFDDKVAIVTGA----------------AGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD   66 (250)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             779988999797----------------6889999999999869999999798899999999998559849999825899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHH
Q ss_conf             657789999998505-888799740444
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVS  281 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVS  281 (405)
                      -++.+++.+++.+.+ ..|++|.+|++.
T Consensus        67 ~~~v~~~~~~~~~~fG~iDilVNnAg~~   94 (250)
T PRK07774         67 PDSAKAMADRTVSAFGGIDYLVNNAAIY   94 (250)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             9999999999999839998999888435


No 80 
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.09  E-value=0.002  Score=41.77  Aligned_cols=82  Identities=20%  Similarity=0.218  Sum_probs=54.8

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC------C-CCCCEE-----EEEH
Q ss_conf             001797789840420101021357621577278899999998258838998415667------7-656746-----7546
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI------A-DPPNVM-----TIHV  255 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~------~-~~~~~~-----~i~v  255 (405)
                      -+|+||.+|||+|                |+-.|.++|+++...||+|..+.-.-..      . ....+.     +-..
T Consensus         6 ~~L~gK~alITGa----------------s~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   69 (253)
T PRK08993          6 FSLEGKVAVVTGC----------------DTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKI   69 (253)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf             3999998999388----------------768999999999987999999558774999999996599579998037999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             57789999998505-8887997404444432
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      +..+++.+++.+.+ ..|++|.+|.+....+
T Consensus        70 ~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~  100 (253)
T PRK08993         70 DGIPALLERAVAEFGHIDILVNNAGLIRRED  100 (253)
T ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
T ss_conf             9999999999998499729998997788998


No 81 
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.09  E-value=0.0023  Score=41.43  Aligned_cols=124  Identities=15%  Similarity=0.210  Sum_probs=70.1

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC---CCCCEEEEEHH-HHHHH
Q ss_conf             200179778984042010102135762157727889999999825883899841566-77---65674675465-77899
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA---DPPNVMTIHVE-RAEDM  261 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~---~~~~~~~i~v~-t~~em  261 (405)
                      +.+|+||.+|||+|+                +-.|.++|+.+...||+|.++.-... ++   ...+.+.+.++ +.++-
T Consensus         4 ~~~l~gK~~lVTG~~----------------~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~   67 (245)
T PRK07060          4 AFDFSGKSVLVTGAS----------------SGIGRACAVALAARGARVVAAARNQADLDRLAGETGCEPLRLDVGDDAA   67 (245)
T ss_pred             CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCEEEEEECCCHHH
T ss_conf             737999989994777----------------6899999999998799999997998999999986398799980799999


Q ss_pred             HHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH---CCCCCCEEEEEE
Q ss_conf             99998505-8887997404444432222101123345577510455218068988762---148995899981
Q gi|254780622|r  262 LQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH---HQCRPSIVVGFA  330 (405)
Q Consensus       262 ~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~---~k~~~~~lVGFk  330 (405)
                      .++..+.+ ..|++|.+|++..+.+..    +++.++....+.+.|.-.--+.+...+   .+.+...+|-..
T Consensus        68 v~~~~~~~g~iDilVnnAG~~~~~~~~----~~~~e~~~~~~~vNl~~~~~~~k~~~~~m~~~~~~G~IInis  136 (245)
T PRK07060         68 IRAALAGAGAFDGLVNCAGIASLESAI----DMTAAGFDRVMAVNARGALLVARHVARAMIRAGRGGSIVNVS  136 (245)
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCCCCH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             999999659998999898879999901----399999999999970999999999999999808980799986


No 82 
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.06  E-value=0.0079  Score=37.97  Aligned_cols=133  Identities=23%  Similarity=0.301  Sum_probs=79.8

Q ss_pred             CEEE-ECCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC--------C
Q ss_conf             6898-4056600000388999999986400013-4652125531032233343455899999998631013--------2
Q gi|254780622|r  118 PVLI-APAMNFMMWAKPATQRNVEILQKDGCYF-IGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSK--------E  187 (405)
Q Consensus       118 pi~i-aPaMn~~M~~~p~~~~nl~~L~~~g~~v-i~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~--------~  187 (405)
                      -+++ .|+.-.+     ..++-++.|.++|+.+ +-|....+..  ..+.-|=.+.++       ++.++.        .
T Consensus       180 ~iiiAips~~~~-----~~~~i~~~l~~~~~~v~~lP~~~~l~~--~~~~lreI~ieD-------LLgR~pV~~d~~~i~  245 (588)
T COG1086         180 LILIAIPSASQE-----ERRRILLRLARTGIAVRILPQLTDLKD--LNGQLREIEIED-------LLGRPPVALDTELIG  245 (588)
T ss_pred             EEEEECCCCCHH-----HHHHHHHHHHHCCCCEEECCCHHHHHH--HCCCCCCCCHHH-------HHCCCCCCCCHHHHH
T ss_conf             699964878899-----999999998755970785574899987--324654377989-------738999987879998


Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----------CCCCCEEEE---
Q ss_conf             001797789840420101021357621577278899999998258838998415667-----------765674675---
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----------ADPPNVMTI---  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----------~~~~~~~~i---  253 (405)
                      ..+.||+||||+|+                |.-|.++.+.....+.....+.+....           ..| ..+..   
T Consensus       246 ~~~~gK~vLVTGag----------------GSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~i  308 (588)
T COG1086         246 AMLTGKTVLVTGGG----------------GSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYI  308 (588)
T ss_pred             HHCCCCEEEEECCC----------------CCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCC-CCCEEEEE
T ss_conf             67079889996898----------------73679999999854987899961763779999999986278-75168996


Q ss_pred             -EHHHHHHHHHHHHHCCCCCEEEEEHHHHH
Q ss_conf             -46577899999985058887997404444
Q gi|254780622|r  254 -HVERAEDMLQEVLKALPVDIAVMVSAVSD  282 (405)
Q Consensus       254 -~v~t~~em~~~~~~~~~~D~~I~aAAVSD  282 (405)
                       .|...+-|.. +++..+.|+++||||---
T Consensus       309 gdVrD~~~~~~-~~~~~kvd~VfHAAA~KH  337 (588)
T COG1086         309 GDVRDRDRVER-AMEGHKVDIVFHAAALKH  337 (588)
T ss_pred             CCCCCHHHHHH-HHHCCCCCEEEEHHHHCC
T ss_conf             35346899999-986388866887555536


No 83 
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.05  E-value=0.0026  Score=41.08  Aligned_cols=102  Identities=23%  Similarity=0.259  Sum_probs=63.1

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-------C-CCCCEEEE-----E
Q ss_conf             0179778984042010102135762157727889999999825883899841566-7-------7-65674675-----4
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-------A-DPPNVMTI-----H  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-------~-~~~~~~~i-----~  254 (405)
                      +|+||.+|||+|.                +-.|.++|+.+...||+|.+..-... +       . ....+..+     .
T Consensus         7 ~L~gKvalITGgs----------------~GIG~aia~~la~~Ga~V~i~~~~~~~l~~~~~~i~~~g~~~~~~~~Dv~~   70 (263)
T PRK07814          7 RLDGQVAVVTGAG----------------RGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH   70 (263)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             8999989995896----------------689999999999879989999698999999999998529928999815899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH
Q ss_conf             657789999998505-88879974044444322221011233455775104552180
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP  310 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p  310 (405)
                      -+..+++.+++.+.+ ..|++|.+|+.....+-  .+  +.-....+.+.+.|.-.-
T Consensus        71 ~~~v~~~v~~~~~~~G~iDiLVnNAg~~~~~~~--~~--~~~e~w~~~~~vNl~~~~  123 (263)
T PRK07814         71 PEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPL--LS--TSTKDLADAFTFNVATAH  123 (263)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH--HH--CCHHHHHHHHHHHHHHHH
T ss_conf             999999999999982998899989866788844--54--889999999999719999


No 84 
>PRK09186 flagellin modification protein A; Provisional
Probab=97.04  E-value=0.003  Score=40.66  Aligned_cols=77  Identities=25%  Similarity=0.335  Sum_probs=50.7

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC--------CC--CCCCCEEEE--EH-
Q ss_conf             017977898404201010213576215772788999999982588389984156--------67--765674675--46-
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV--------SI--ADPPNVMTI--HV-  255 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~--------~~--~~~~~~~~i--~v-  255 (405)
                      .|+||.+|||+|                ||-.|.++|+.|...||+|.+..-..        .+  .....+..+  .+ 
T Consensus         1 lL~gK~~lVTGg----------------s~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~Dvt   64 (255)
T PRK09186          1 MLEGKTILITGA----------------GGLIGSALVKAILEAGGIVIAADINKEALNKLLESLGTIEKTKLTLVELDIT   64 (255)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             989598999795----------------8689999999999879999999698899999999998705980799984689


Q ss_pred             --HHHHHHHHHHHHCC-CCCEEEEEHHHH
Q ss_conf             --57789999998505-888799740444
Q gi|254780622|r  256 --ERAEDMLQEVLKAL-PVDIAVMVSAVS  281 (405)
Q Consensus       256 --~t~~em~~~~~~~~-~~D~~I~aAAVS  281 (405)
                        +..+++.+++.+.+ ..|++|.+|.+.
T Consensus        65 ~~~~v~~~~~~~~~~~g~id~lVnnA~~~   93 (255)
T PRK09186         65 DQESLEEFLSKSQERYGKIDGAVNCAYPR   93 (255)
T ss_pred             CHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             99999999999999819977899757667


No 85 
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.04  E-value=0.0026  Score=41.05  Aligned_cols=35  Identities=34%  Similarity=0.387  Sum_probs=17.7

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             0179778984042010102135762157727889999999825883899
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVIL  237 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~l  237 (405)
                      .|+||++|||+|+              |++-.|.+||+.+.+.||+|.+
T Consensus         3 ~L~gK~~lVTGa~--------------~~~GIG~aia~~la~~Ga~v~~   37 (261)
T PRK08690          3 FLQGKKILITGMI--------------SERSIAYGIAKACREQGAELAF   37 (261)
T ss_pred             CCCCCEEEEECCC--------------CCHHHHHHHHHHHHHCCCEEEE
T ss_conf             9999889998987--------------8638999999999985999999


No 86 
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.04  E-value=0.0027  Score=40.98  Aligned_cols=82  Identities=24%  Similarity=0.217  Sum_probs=51.5

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEEE-----E
Q ss_conf             0017977898404201010213576215772788999999982588389984156677--------65674675-----4
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMTI-----H  254 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~i-----~  254 (405)
                      .+|+||.+|||+|.                +=.|.++|+.+...||.|.++.-.-...        .-..+..+     +
T Consensus         3 ~~l~gKvalVTG~s----------------~GIG~a~a~~la~~Ga~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~   66 (258)
T PRK08628          3 LNLKDKVVIVTGGA----------------SGIGAAISLRLAEEGAIPVVFGRSAPDDEFAEELRALQPRAEFVQVDLQD   66 (258)
T ss_pred             CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf             99799989992777----------------78999999999987998999808802399999999539978999952799


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             657789999998505-8887997404444432
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      .+..+++.+++.+.+ ..|++|.+|.+.+..+
T Consensus        67 ~~~v~~~v~~~~~~~g~iDiLVnnAGi~~~~~   98 (258)
T PRK08628         67 DAQCRDAVAQTVAKFGRIDGLVNNAGVNDGVG   98 (258)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             99999999999998299889998882278877


No 87 
>PRK12827 short chain dehydrogenase; Provisional
Probab=97.03  E-value=0.0028  Score=40.86  Aligned_cols=152  Identities=20%  Similarity=0.221  Sum_probs=84.2

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--CC---------CCC--CEEEE--
Q ss_conf             0179778984042010102135762157727889999999825883899841566--77---------656--74675--
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--IA---------DPP--NVMTI--  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--~~---------~~~--~~~~i--  253 (405)
                      .|+||.+|||+|.                +-.|.++|+.|...||+|.++.-...  ..         ...  .+..+  
T Consensus         3 ~L~gKvalVTGas----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   66 (251)
T PRK12827          3 SLDSRRVLITGGS----------------GGLGRAIAVRLAADGADVIVLDIHPMRGRAEAEAVAALIEAAGGKALGLAF   66 (251)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             9899889996825----------------589999999999879989998488853289999999999964984999990


Q ss_pred             ---EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH---CCCCCCEE
Q ss_conf             ---4657789999998505-8887997404444432222101123345577510455218068988762---14899589
Q gi|254780622|r  254 ---HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH---HQCRPSIV  326 (405)
Q Consensus       254 ---~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~---~k~~~~~l  326 (405)
                         +..+.+++.+++.+.+ ..|++|.+|.+....+-.    .+..++....+.+.|.-+--+.+.+.+   ++.....+
T Consensus        67 Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAG~~~~~~~~----~~~~e~w~~~~~vNl~g~~~~~~~~~~~m~~~~~~G~I  142 (251)
T PRK12827         67 DVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFA----ELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRI  142 (251)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             38999999999999999839997999899889999903----49999999999998599999999999999983899469


Q ss_pred             EEEECC---C--CHHHHHHHHH----------HHHCCCCEEEEECCCCC
Q ss_conf             998114---1--2389999999----------99749989999205776
Q gi|254780622|r  327 VGFAAE---T--QCIEQNAREK----------LLNKGADFIVSNCILPD  360 (405)
Q Consensus       327 VGFkaE---T--~~l~~~A~~K----------l~~K~~D~IVAN~i~~~  360 (405)
                      |-+.-.   .  .....++-.|          -.+-+-+=|-.|-|.++
T Consensus       143 InisS~~~~~~~~~~~~Y~asKaav~~lTr~lA~e~a~~gIrVNaV~PG  191 (251)
T PRK12827        143 VNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPG  191 (251)
T ss_pred             EEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf             9982533355789868899999999999999999965049699999648


No 88 
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.02  E-value=0.003  Score=40.66  Aligned_cols=81  Identities=23%  Similarity=0.208  Sum_probs=42.2

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCCCCCE--EEEEHHHH
Q ss_conf             0179778984042010102135762157727889999999825883899841566--------7765674--67546577
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IADPPNV--MTIHVERA  258 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~~~~~--~~i~v~t~  258 (405)
                      +|+||.|+||+|.                +=.|.++|+.+..+||+|.+..-...        ......+  .+-.-++.
T Consensus         2 dl~gKvvlITGas----------------sGIG~a~A~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~DVtd~~~v   65 (273)
T PRK07825          2 NLRGKVIAITGGA----------------RGIGLATARALAALGAKVAIGDLDEALAKESAAELGLVVGGPLDVTDPASF   65 (273)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCHHHH
T ss_conf             9999889992623----------------399999999999879989999799999999998607855999147999999


Q ss_pred             HHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             89999998505-8887997404444432
Q gi|254780622|r  259 EDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       259 ~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      +++.+++.+.+ +.|++|-+|.+..+.+
T Consensus        66 ~~~~~~~~~~~G~iDiLVNNAGi~~~~~   93 (273)
T PRK07825         66 AAFLDAVEADLGPIDVLVNNAGIMPVGP   93 (273)
T ss_pred             HHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             9999999997099778998787789987


No 89 
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.02  E-value=0.0036  Score=40.20  Aligned_cols=17  Identities=41%  Similarity=0.264  Sum_probs=10.9

Q ss_pred             HHHHHHHHCCCCEEEEE
Q ss_conf             99999982588389984
Q gi|254780622|r  223 AIAKSLAYFGAEVILIS  239 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~  239 (405)
                      .+|.++..+|-.|..|+
T Consensus       172 ~lA~elg~~gIRVNaV~  188 (260)
T PRK06997        172 YLAVSLGPKGIRVNAIS  188 (260)
T ss_pred             HHHHHHHHCCCEEEEEE
T ss_conf             99998611797898873


No 90 
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.02  E-value=0.0042  Score=39.72  Aligned_cols=159  Identities=19%  Similarity=0.221  Sum_probs=81.6

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE--EHH---H
Q ss_conf             0179778984042010102135762157727889999999825883899841566------7765674675--465---7
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI--HVE---R  257 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i--~v~---t  257 (405)
                      +|+||.+|||+|.                +=.|.++|+.|...||+|.+..-...      .........+  .+.   .
T Consensus         6 ~L~gK~alVTG~s----------------~GIG~aiA~~la~~Ga~Vvi~~r~~~~l~~~~~~l~~~~~~~~~Dvtd~~~   69 (251)
T PRK07523          6 DLTGRRALITGSS----------------QGIGYALAKGLAQAGAEVILNGRDAAKLAAAAESLKGSAHTLAFDVTDHDA   69 (251)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCHHH
T ss_conf             6899989995836----------------699999999999879999999699899999999818872799995799999


Q ss_pred             HHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH----HHHHHHCCCCCCEEEEEEC-
Q ss_conf             789999998505-8887997404444432222101123345577510455218068----9887621489958999811-
Q gi|254780622|r  258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI----LKIIGHHQCRPSIVVGFAA-  331 (405)
Q Consensus       258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI----L~~i~~~k~~~~~lVGFka-  331 (405)
                      .+.+.+++.+.+ +.|++|.+|.+....|-.  +  +..++..+.+.+.|.-.--+    +..+.++  ....+|-++- 
T Consensus        70 v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~--~--~~~e~~~~~~~vNl~~~f~~~~~~~~~m~~~--~~G~IInisS~  143 (251)
T PRK07523         70 VRAAIDAFEAEIGPIDILVNNAGMQHRTPLE--D--FPADAFERLLQTNISSVFYVGQAVARHMIAR--GAGKIINIASV  143 (251)
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEEEEH
T ss_conf             9999999999759986999898879999905--5--9999999999997399999999998998863--99679999415


Q ss_pred             --CC--CHHHHHH-----HHHH-----HHCCCCEEEEECCCCCCCCCCCCCEEE
Q ss_conf             --41--2389999-----9999-----974998999920577677777661189
Q gi|254780622|r  332 --ET--QCIEQNA-----REKL-----LNKGADFIVSNCILPDTGFVGKEWNKV  371 (405)
Q Consensus       332 --ET--~~l~~~A-----~~Kl-----~~K~~D~IVAN~i~~~~~~fgsd~n~v  371 (405)
                        ..  .....++     ..-|     .+-.-+=|-.|-|.++  ++.++.++.
T Consensus       144 ~~~~~~~~~~~Y~asKaav~~lTr~lA~e~a~~gIrVNaVaPG--~i~T~~~~~  195 (251)
T PRK07523        144 QSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPG--YFDTPLNAA  195 (251)
T ss_pred             HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC--CCCCHHHHH
T ss_conf             7607689947899999999999999999970209499999737--898732432


No 91 
>PRK07776 consensus
Probab=97.01  E-value=0.0046  Score=39.49  Aligned_cols=160  Identities=19%  Similarity=0.231  Sum_probs=86.7

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CC-CCCCEE-----EEEH
Q ss_conf             00179778984042010102135762157727889999999825883899841566------77-656746-----7546
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IA-DPPNVM-----TIHV  255 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~-~~~~~~-----~i~v  255 (405)
                      -+|+||.+|||+|.                +-.|.++|+.+...||+|.+..-.-+      .. ......     +-+.
T Consensus         4 ~~L~gKv~lITG~~----------------~GIG~aiA~~la~~Ga~V~i~~~~~~~l~~~~~~l~~~~~~~~~~Dv~~~   67 (252)
T PRK07776          4 LDLTGRTAIVTGAS----------------RGIGLAIAQALAAAGANVVITARKQEALDEAAAQLGAERALGVAGHAVDE   67 (252)
T ss_pred             CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCH
T ss_conf             89999989994778----------------79999999999987998999979889999999984799579999742899


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHH-HHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH--CCCCCCEEEEEEC
Q ss_conf             57789999998505-8887997404444-432222101123345577510455218068988762--1489958999811
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSD-WRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH--HQCRPSIVVGFAA  331 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSD-f~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~--~k~~~~~lVGFka  331 (405)
                      +..+++.+.+.+.+ ..|++|..|++.. +.+-  .+  +.-+...+.+.+.|..+--+.+.+.+  .+.+..-+|-+.-
T Consensus        68 ~~~~~~~~~~~~~~g~iDilVnNAg~~~~~~~~--~e--~~~e~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS  143 (252)
T PRK07776         68 EHAREAVDLTLERFGSVDILVNNAGTNPAYGPL--ID--QDLARFRKIFEVNVWAALGWTQLAWKAWMGEHGGAVVNVAS  143 (252)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCH--HH--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             999999999999849986999878668889981--34--99999999999980789999999999986627964998077


Q ss_pred             CC-----CHHHHHH----------HHHHHHCCCCEEEEECCCCCCCCCCCCCEE
Q ss_conf             41-----2389999----------999997499899992057767777766118
Q gi|254780622|r  332 ET-----QCIEQNA----------REKLLNKGADFIVSNCILPDTGFVGKEWNK  370 (405)
Q Consensus       332 ET-----~~l~~~A----------~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~  370 (405)
                      ..     .....++          +.--.+-+-+ |=.|.|+++  ++.++..+
T Consensus       144 ~~~~~~~~~~~~Y~asKaav~~ltk~lA~e~a~~-IrVN~V~PG--~i~T~~~~  194 (252)
T PRK07776        144 IGGLHPSPGIGAYGASKAALIHLTKQLALELAPR-VRVNAVAPG--VVRTKFAE  194 (252)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEEC--CCCCCCHH
T ss_conf             4411579984799999999999999999998699-889999645--79885411


No 92 
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.00  E-value=0.0016  Score=42.43  Aligned_cols=81  Identities=23%  Similarity=0.301  Sum_probs=52.3

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC-------CCCCC---------CCCCEE-
Q ss_conf             0179778984042010102135762157727889999999825883899841-------56677---------656746-
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG-------PVSIA---------DPPNVM-  251 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g-------~~~~~---------~~~~~~-  251 (405)
                      .|+||.+|||+|+                +=.|.++|+.|...||+|.+..=       +.+..         ...+.+ 
T Consensus         3 ~L~GKvalVTGas----------------~GIG~aiA~~lA~~GA~Vvi~D~~~~~~~~~~~~~~a~~~~~ei~~~g~~~   66 (285)
T PRK07791          3 LLDGRVVIVTGAG----------------GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGAAQAVVDEITAAGGEA   66 (285)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf             8899879992867----------------689999999999869999998376431224456799999999999749839


Q ss_pred             ------EEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             ------754657789999998505-8887997404444432
Q gi|254780622|r  252 ------TIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       252 ------~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                            +-..+..+.|.+++.+.+ ..|++|.+|.+....+
T Consensus        67 ~~~~~Dvsd~~~v~~~v~~~~~~fG~iDiLVNNAGi~~~~~  107 (285)
T PRK07791         67 VANGDDIADWDQAANLVDAAVETFGGLDVLVNNAGILRDRM  107 (285)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             99968999999999999999998399869997886678887


No 93 
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.99  E-value=0.0035  Score=40.28  Aligned_cols=119  Identities=24%  Similarity=0.242  Sum_probs=69.5

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC--------CCC-CCCCEE-----EEEH
Q ss_conf             17977898404201010213576215772788999999982588389984156--------677-656746-----7546
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV--------SIA-DPPNVM-----TIHV  255 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~--------~~~-~~~~~~-----~i~v  255 (405)
                      |+||.+|||+|                |+=+|.++|+.+...||+|.+..-..        .+. ....+.     +-..
T Consensus         1 L~gKvalITG~----------------s~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~d~   64 (250)
T TIGR03206         1 LKDKTAIVTGG----------------GGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDR   64 (250)
T ss_pred             CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf             95199999685----------------76899999999998799999997988999999999995399289999448999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEEEE
Q ss_conf             57789999998505-888799740444443222210112334557751045521806----8988762148995899981
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVGFA  330 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVGFk  330 (405)
                      .+.+++.+.+.+.+ +.|++|.+|++.-+.+..    ++.-+.....+.+.|.-+--    .+..+.+++  ..-+|-..
T Consensus        65 ~~v~~~v~~~~~~~G~iDilvnnAg~~~~~~~~----~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--~G~IVnis  138 (250)
T TIGR03206        65 DSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFT----KTEPPLWERLIAINLTGALHMHHAVLPGMVERG--AGRIVNIA  138 (250)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEEEC
T ss_conf             999999999999759997999898889998903----499999999999982999999999999999749--91799965


No 94 
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.99  E-value=0.0032  Score=40.50  Aligned_cols=108  Identities=20%  Similarity=0.125  Sum_probs=67.1

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C-CCCCE-------EEEE
Q ss_conf             0179778984042010102135762157727889999999825883899841566-7-----7-65674-------6754
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A-DPPNV-------MTIH  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~-~~~~~-------~~i~  254 (405)
                      +|+||.+|||+|.                +=.|.++|+.|...||+|.+..-.-. +     . ...+-       .+-.
T Consensus         4 ~l~gKvalVTGgs----------------~GIG~a~A~~la~~Ga~V~i~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~   67 (262)
T PRK13394          4 NLNGKTAVVTGAA----------------SGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN   67 (262)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             8899989995857----------------789999999999879999999798899999999999629939999815899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH
Q ss_conf             657789999998505-88879974044444322221011233455775104552180689887
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII  316 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i  316 (405)
                      .+..+++.+++.+.+ ..|++|.+|.+..+.|-.  +  +.-+...+.+.+.|.-+--+.+.+
T Consensus        68 ~~~v~~~v~~~~~~~G~iDiLVnnAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~~~~~~~~  126 (262)
T PRK13394         68 EDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIE--N--YSFADWKKMQAIHVDGAFLTTKAA  126 (262)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999819999999899889999916--5--999999999999758999999999


No 95 
>PRK06346 consensus
Probab=96.99  E-value=0.0033  Score=40.39  Aligned_cols=78  Identities=27%  Similarity=0.388  Sum_probs=55.2

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C-CCCC--EEEE-----E
Q ss_conf             0179778984042010102135762157727889999999825883899841566-7-----7-6567--4675-----4
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A-DPPN--VMTI-----H  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~-~~~~--~~~i-----~  254 (405)
                      .|+||.++||+|                |+-.|.++|+.|...||+|.+..-... .     . ...+  +..+     +
T Consensus         2 ~l~gKv~lITGg----------------s~GIG~a~a~~la~~Ga~V~i~~r~~e~~~~~~~~l~~~~~~~~~~~~Dv~~   65 (251)
T PRK06346          2 KLKGKVAIVTGA----------------ASGMGKSIAELFAKEGAKVVVADLNLERAQKVVEEITSNGGTAIAVVANVTK   65 (251)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             889988999475----------------7889999999999879989999798999999999999639908999778898


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHH
Q ss_conf             657789999998505-8887997404444
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSD  282 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSD  282 (405)
                      -++.+++.+++.+.+ ..|++|.+|++.+
T Consensus        66 ~~~v~~~i~~~~~~fg~iDiLVnNAgi~~   94 (251)
T PRK06346         66 QEDIENMVDTAVDTYGTLDILVNNAGIMD   94 (251)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf             99999999999998299979998998899


No 96 
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.98  E-value=0.0032  Score=40.49  Aligned_cols=100  Identities=18%  Similarity=0.231  Sum_probs=62.4

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEEE-----EH
Q ss_conf             017977898404201010213576215772788999999982588389984156677--------65674675-----46
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMTI-----HV  255 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~i-----~v  255 (405)
                      +|+||.+|||+|+               + -.|.++|+.|.+.||+|..+.-. ..+        ....+..+     ..
T Consensus         5 ~L~gKvalVTGas---------------~-GIG~aia~~la~~Ga~Vv~~~~~-~~~~~~~~~~~~g~~~~~~~~Dv~~~   67 (251)
T PRK12481          5 DLNGKVAIITGCN---------------T-GLGQGMAIGLAKAGADIVGVGVA-EAPETQAQVEALGRKFHFITADLIQQ   67 (251)
T ss_pred             CCCCCEEEEECCC---------------C-HHHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf             8999989994867---------------6-89999999999869999997898-71999999997599479999127999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
Q ss_conf             57789999998505-8887997404444432222101123345577510455218
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN  309 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~  309 (405)
                      +..+.+.+++.+.+ ..|++|..|.+....+-.  +  .+-++....+.+.|.-+
T Consensus        68 ~~~~~~~~~~~~~~g~iDilVNNAG~~~~~~~~--~--~~~~~w~~~~~vNl~~~  118 (251)
T PRK12481         68 KDIDSIVSQAVEVMGHIDILINNAGIIRRQDLL--E--FGNKDWDDVININQKTV  118 (251)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH--H--CCHHHHHHHHHHHHHHH
T ss_conf             999999999999819998999899899999903--4--99999999999983779


No 97 
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.98  E-value=0.0046  Score=39.48  Aligned_cols=108  Identities=21%  Similarity=0.225  Sum_probs=64.9

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCC-CCCEE-----EEEH
Q ss_conf             00179778984042010102135762157727889999999825883899841566------776-56746-----7546
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IAD-PPNVM-----TIHV  255 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~-~~~~~-----~i~v  255 (405)
                      .+|+||.+|||+|.                +=.|.++|+.|...||+|.+..-...      ... -.++.     +-.-
T Consensus         7 ~~L~GKvalVTGgs----------------~GIG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~~~Dvt~~   70 (264)
T PRK12829          7 KPLDGLRVLVTGGA----------------SGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADP   70 (264)
T ss_pred             CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCH
T ss_conf             68999979994737----------------68999999999987998999979989999999974799759999628999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH
Q ss_conf             57789999998505-888799740444443222210112334557751045521806898
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~  314 (405)
                      ++.+++.+++.+.+ ..|++|.+|.+.....+ ..+  +.-+.+...+.+.|.-+--..+
T Consensus        71 ~~v~~~v~~~~~~~G~iDiLVNNAGi~~~~~~-~~~--~~~e~w~~~~~vNl~g~~~~~~  127 (264)
T PRK12829         71 AQVERVFDTAVERFGGLDVLVNNAGIAGPTGG-IDE--ITPEQWEQTLAVNLNGQFYFAR  127 (264)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC-HHH--CCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999973999899989989999998-023--9999999999998487899999


No 98 
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.97  E-value=0.0028  Score=40.90  Aligned_cols=110  Identities=25%  Similarity=0.291  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--C------CCCCEE--EE----
Q ss_conf             001797789840420101021357621577278899999998258838998415667--7------656746--75----
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--A------DPPNVM--TI----  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--~------~~~~~~--~i----  253 (405)
                      ..|+||.+|||+|                |+-.|.++|+.|...||+|.+.......  .      .-.+.+  .+    
T Consensus        41 grL~GKvalVTGg----------------s~GIG~aiA~~la~~GA~V~i~~~~~~~~a~~~~~~~~~~G~~~~~~~~Dv  104 (289)
T PRK06701         41 GKLKGKVALITGG----------------DSGIGRAVAVAFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDV  104 (289)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             8779998999682----------------579999999999987998999828946789999999996399089998478


Q ss_pred             -EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH
Q ss_conf             -4657789999998505-88879974044444322221011233455775104552180689887
Q gi|254780622|r  254 -HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII  316 (405)
Q Consensus       254 -~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i  316 (405)
                       +-...+++.+++.+.+ ..|++|..|+.+....+ ..+  +.-+.+...+.+.|.-+--+.+..
T Consensus       105 ~d~~~v~~~v~~~~~~fG~iDiLVNNAG~~~~~~~-~~~--~~~~~~~~~~~vNl~g~f~~~~~~  166 (289)
T PRK06701        105 SDEQFCKDAVEETVRELGRLDILVNNAAQQYPQQS-LED--ITAEQLDKTFRTNIYSYFHMTKAA  166 (289)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC-HHH--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999985999899988834678887-244--999999999745217899999999


No 99 
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.97  E-value=0.0037  Score=40.12  Aligned_cols=103  Identities=21%  Similarity=0.228  Sum_probs=64.5

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--C--------CCCCEEEE----
Q ss_conf             001797789840420101021357621577278899999998258838998415667--7--------65674675----
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--A--------DPPNVMTI----  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--~--------~~~~~~~i----  253 (405)
                      -+|+||.+|||+|+.                -.|.++|+.|...||+|.+..-....  .        .......+    
T Consensus        12 f~L~gKvalVTGa~~----------------GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv   75 (262)
T PRK06114         12 FDLDGQVAFVTGAGS----------------GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADV   75 (262)
T ss_pred             CCCCCCEEEEECCCC----------------HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             498999899968478----------------9999999999987998999958974699999999996599589998168


Q ss_pred             -EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH
Q ss_conf             -4657789999998505-88879974044444322221011233455775104552180
Q gi|254780622|r  254 -HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP  310 (405)
Q Consensus       254 -~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p  310 (405)
                       +-+..+++.+++.+.+ ..|++|-+|.+....|..    .+.-++....+.+.|.-+-
T Consensus        76 t~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~----~~~~e~w~~~~~vNl~g~f  130 (262)
T PRK06114         76 TSKSDLAAAVARTEAELGALTLAVNAAGIANANPAE----EMEEEQWQTVMDINLTGVF  130 (262)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHH
T ss_conf             999999999999999819998999899899998815----5999999999999736699


No 100
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.96  E-value=0.0036  Score=40.17  Aligned_cols=107  Identities=22%  Similarity=0.240  Sum_probs=66.8

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC------CCCC--EEEE-----E
Q ss_conf             0179778984042010102135762157727889999999825883899841566-77------6567--4675-----4
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA------DPPN--VMTI-----H  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~------~~~~--~~~i-----~  254 (405)
                      +|+||.+|||+|                |+-.|.++|+.|...||+|.+..-... ++      ...+  +..+     +
T Consensus         9 ~L~gKvalVTG~----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~   72 (259)
T PRK08213          9 DLTGKTALVTGG----------------SRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWLAADVAD   72 (259)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             999998999487----------------7689999999999869999999798899999999999549958999826899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH
Q ss_conf             657789999998505-8887997404444432222101123345577510455218068988
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI  315 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~  315 (405)
                      -+..+++.+++.+.+ ..|++|.+|.+....|..    .+.-+.....+.+.|.-.--+.+.
T Consensus        73 ~~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~----~~~~e~w~~~~~vNl~g~f~~~~~  130 (259)
T PRK08213         73 EADIERLAEETLERFGHIDILVNNAGATWGAPAE----DHPVEAWDKVMNLNVRGTFLLSQA  130 (259)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC----CCCHHHHHHHHHHHCCCHHHHHHH
T ss_conf             9999999999999839998999899778898645----699999999998844119999999


No 101
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.96  E-value=0.0031  Score=40.62  Aligned_cols=109  Identities=17%  Similarity=0.201  Sum_probs=58.9

Q ss_pred             HHHHHHHHCCCCCCCCCCEEEEEECCCHHEECC-------EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---
Q ss_conf             999986310132001797789840420101021-------3576215772788999999982588389984156677---
Q gi|254780622|r  176 RQITWLLYKSKELLLKGKRALVTSGPTYEPLDP-------MRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---  245 (405)
Q Consensus       176 ~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~-------VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---  245 (405)
                      +...+.|.+.+..+-.|.-|-|.++....+-|.       |=.+|--|+| .|.+||+.|.+.||+|.++.=+-...   
T Consensus       169 ~~~lrf~ls~~sa~v~gq~~~v~~~~~~~~~~~~~pL~GKVALVTGAArG-IG~AIA~~LAreGA~VVi~Di~~a~~~l~  247 (447)
T PRK08261        169 ESTLRFFLSPRSAYVSGQVVRVGAADAAPPADWDRPLAGKVALVTGAARG-IGAAIAEVLARDGAHVVCLDVPQAGDDLA  247 (447)
T ss_pred             HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHH
T ss_conf             55242440666331125389963898889888788899998999172578-99999999998699999982711489999


Q ss_pred             ----CCCC----EEEEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             ----6567----46754657789999998505-8887997404444432
Q gi|254780622|r  246 ----DPPN----VMTIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       246 ----~~~~----~~~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                          ...+    +++-.-+..+++.+.+.+.+ ..|++|++|.+...++
T Consensus       248 ~~a~elgg~al~~DVt~~~a~~~lv~~~~~~~G~lDILVnNAGi~~~~~  296 (447)
T PRK08261        248 AVAARLGGTALALDITAPDAPAKIAEHLAERHGGLDIVVHNAGITRDKT  296 (447)
T ss_pred             HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf             9998709808995368999999999999996499989998997899977


No 102
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=96.95  E-value=0.0052  Score=39.15  Aligned_cols=19  Identities=16%  Similarity=0.093  Sum_probs=15.7

Q ss_pred             HHHHHHHHHHCCCEEEEEE
Q ss_conf             9999999998798899985
Q gi|254780622|r   21 SLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus        21 ~~~l~~~L~~~g~~V~vv~   39 (405)
                      .-.|++.|.+.|++|.++-
T Consensus        13 Gs~l~~~Ll~~g~~V~~~d   31 (338)
T PRK10675         13 GSHTCVQLLQNGHDVVILD   31 (338)
T ss_pred             HHHHHHHHHHCCCEEEEEE
T ss_conf             9999999997849899998


No 103
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.95  E-value=0.004  Score=39.90  Aligned_cols=121  Identities=21%  Similarity=0.229  Sum_probs=69.4

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-------CC-CCCEEEE-----
Q ss_conf             00179778984042010102135762157727889999999825883899841566-7-------76-5674675-----
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-------AD-PPNVMTI-----  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-------~~-~~~~~~i-----  253 (405)
                      ..|+||.+|||+|                |+=.|.++|+.|...||+|.+..-... .       .. ...+..+     
T Consensus         3 ~~L~~KvalVTGg----------------s~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~   66 (250)
T PRK12939          3 SSLAGKRALVTGA----------------ARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLA   66 (250)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_conf             9999987999583----------------668999999999987999999969889999999999955990999992489


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH----HHHHHHCCCCCCEEEE
Q ss_conf             4657789999998505-8887997404444432222101123345577510455218068----9887621489958999
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI----LKIIGHHQCRPSIVVG  328 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI----L~~i~~~k~~~~~lVG  328 (405)
                      +.+..+.+.+++.+.+ ..|++|.+|.+....+-.  +  +.-....+.+.+.|.-+--+    +..+.++  ...-+|-
T Consensus        67 ~~~~~~~~~~~~~~~~g~iDiLVNNAG~~~~~~~~--~--~~~e~~~~~~~iNl~~~~~~~k~~~~~m~~~--~~G~IIn  140 (250)
T PRK12939         67 DPASVQRFFDAAAAALGGLDGLVNNAGITNSKSAT--E--LDIDTWDAVMNVNVRGTFLMSRAALPHLRDS--GRGRIVN  140 (250)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH--H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEE
T ss_conf             99999999999999749997999887789999903--4--9999999999998299999999999999984--9937999


Q ss_pred             EE
Q ss_conf             81
Q gi|254780622|r  329 FA  330 (405)
Q Consensus       329 Fk  330 (405)
                      +.
T Consensus       141 is  142 (250)
T PRK12939        141 LA  142 (250)
T ss_pred             EC
T ss_conf             80


No 104
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.95  E-value=0.0042  Score=39.78  Aligned_cols=102  Identities=23%  Similarity=0.189  Sum_probs=61.3

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCCCCCEEEE-----EH
Q ss_conf             0179778984042010102135762157727889999999825883899841566--------7765674675-----46
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IADPPNVMTI-----HV  255 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~~~~~~~i-----~v  255 (405)
                      +|+||.+|||+|+                +=.|.++|+.|...||+|.+..-...        +.....+..+     ..
T Consensus         2 ~L~gKvalVTGas----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~   65 (252)
T PRK06138          2 RLAGRVAIVTGAG----------------SGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSA   65 (252)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf             8899889994746----------------799999999999879989999688789999999983799199999428999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH
Q ss_conf             57789999998505-88879974044444322221011233455775104552180
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP  310 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p  310 (405)
                      +..+++.+.+.+.+ ..|++|.+|.+....+-.  +  +.-+.....+.+.|.-+-
T Consensus        66 ~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~f  117 (252)
T PRK06138         66 EAVEALVDFVAARWGRLDVLVNNAGFGCGGTVV--T--TDEADWDAVMRVNVGGVF  117 (252)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC--C--CCHHHHHHHHHHHHHHHH
T ss_conf             999999999999829998999898899999801--0--999999999999969999


No 105
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.94  E-value=0.0035  Score=40.23  Aligned_cols=36  Identities=25%  Similarity=0.328  Sum_probs=17.3

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             01797789840420101021357621577278899999998258838998
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li  238 (405)
                      .|+||.+|||+++.              +.=.|.++|+.+...||+|.+.
T Consensus         4 ~L~gK~~lVTGaag--------------~~GIG~a~A~~la~~Ga~Vv~~   39 (252)
T PRK06079          4 ILSGKKIVVMGVAN--------------KRSIAWGCAQAIKDQGATVIYT   39 (252)
T ss_pred             CCCCCEEEEECCCC--------------CCHHHHHHHHHHHHCCCEEEEE
T ss_conf             13998899989999--------------8779999999999869999998


No 106
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.94  E-value=0.0045  Score=39.58  Aligned_cols=81  Identities=23%  Similarity=0.236  Sum_probs=47.6

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC------CCCC--EEE-----EEH
Q ss_conf             017977898404201010213576215772788999999982588389984156677------6567--467-----546
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA------DPPN--VMT-----IHV  255 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~------~~~~--~~~-----i~v  255 (405)
                      .|+||.+|||+|.                +=.|.++|+.|...||+|.+..-.-...      ...+  +..     -.-
T Consensus         3 ~L~gKvalVTGas----------------~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~g~~~~~~~~Dvsd~   66 (263)
T PRK08226          3 KLTGKTALITGAL----------------QGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDP   66 (263)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCH
T ss_conf             9899889994737----------------799999999999879989999698799999999983699179999417999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             57789999998505-8887997404444432
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      +..+++.+++.+.+ +.|++|.+|.+....+
T Consensus        67 ~~v~~~v~~~~~~~G~iDiLVNNAGi~~~~~   97 (263)
T PRK08226         67 ASVAAAIKRAKEKEGRIDILVNNAGVCRLGN   97 (263)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             9999999999998399869998997789999


No 107
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.93  E-value=0.003  Score=40.68  Aligned_cols=106  Identities=26%  Similarity=0.292  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEEE-----EH
Q ss_conf             017977898404201010213576215772788999999982588389984156677--------65674675-----46
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMTI-----HV  255 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~i-----~v  255 (405)
                      +|+||.+|||+|+                +-.|.++|+.+...||+|.+..-....+        ....+..+     .-
T Consensus        12 ~L~gKvalVTGas----------------~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~   75 (258)
T PRK06935         12 SLKGKVAIVTGGN----------------TGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQLDLTKK   75 (258)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf             9999989994857----------------589999999999879999997299789999999996699379999048999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH
Q ss_conf             57789999998505-888799740444443222210112334557751045521806898
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~  314 (405)
                      +..+++.+++.+.+ +.|++|..|.+....+-.  +  +.-.+....+.+.|.-.--+.+
T Consensus        76 ~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~~~~~~  131 (258)
T PRK06935         76 ESAEAVVAEALEKFGKIDILVNNAGTIRRAPLL--E--YKDEDWQAVIDINLNSVYHLSQ  131 (258)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999749999999899999999802--3--9999999999986478999999


No 108
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.92  E-value=0.0046  Score=39.50  Aligned_cols=157  Identities=22%  Similarity=0.243  Sum_probs=85.4

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC------CCCCE-------EEEE
Q ss_conf             0179778984042010102135762157727889999999825883899841566-77------65674-------6754
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA------DPPNV-------MTIH  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~------~~~~~-------~~i~  254 (405)
                      +|+||.+|||+|                |+-.|.++|+.|...||+|.+....-. ++      ...+.       ++-.
T Consensus         7 ~l~gK~alVTG~----------------s~GIG~aiA~~la~~Ga~Vii~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~   70 (265)
T PRK07097          7 SLKGKIALITGA----------------SYGIGFAIAKAYAEAGATIVFNDIKQELVDKGLAAYRELGIEAHGYVCDVTD   70 (265)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             989998999585----------------7689999999999869999999599899999999999549917999932899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH----HHHHHHCCCCCCEEEEE
Q ss_conf             657789999998505-8887997404444432222101123345577510455218068----98876214899589998
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI----LKIIGHHQCRPSIVVGF  329 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI----L~~i~~~k~~~~~lVGF  329 (405)
                      .+..+.+.+++.+.+ ..|++|.+|.+....+-    .++.-+.....+.+.|.-.--+    +..+.+++  ...+|-+
T Consensus        71 ~~~v~~~~~~~~~~~g~iDiLVnNAG~~~~~~~----~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~G~IVni  144 (265)
T PRK07097         71 EDGIQAMVAQIEKEVGVIDILVNNAGIIRRIPM----LEMSAEDFRQVIDIDLNAPFIVSKAVLPSMIKKG--HGKIINI  144 (265)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCH----HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCEEEEE
T ss_conf             999999999999982999899989989999882----6599999999999860728999999999899808--9759999


Q ss_pred             EC---CC--CHHHHHHHHH-----H-----HHCCCCEEEEECCCCCCCCCCCCCE
Q ss_conf             11---41--2389999999-----9-----9749989999205776777776611
Q gi|254780622|r  330 AA---ET--QCIEQNAREK-----L-----LNKGADFIVSNCILPDTGFVGKEWN  369 (405)
Q Consensus       330 ka---ET--~~l~~~A~~K-----l-----~~K~~D~IVAN~i~~~~~~fgsd~n  369 (405)
                      .-   ..  .....++-.|     |     .+-.-+=|-.|.|.++  ++.++..
T Consensus       145 sS~~~~~~~~~~~~Y~asKaav~~ltr~lA~e~a~~gIrVN~V~PG--~i~T~~~  197 (265)
T PRK07097        145 CSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPG--YIATPQT  197 (265)
T ss_pred             ECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC--CCCCCCC
T ss_conf             0521156788866899999999999999999970249599999658--8988630


No 109
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.92  E-value=0.0044  Score=39.64  Aligned_cols=81  Identities=20%  Similarity=0.221  Sum_probs=55.7

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCC--E-----EEE
Q ss_conf             017977898404201010213576215772788999999982588389984156677--------6567--4-----675
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPN--V-----MTI  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~--~-----~~i  253 (405)
                      .+++|.+|||+|                |+-.|.++|+.|...|++|.+.+......        ...+  .     .+-
T Consensus         6 ~~~~KvalVTGa----------------s~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dl~   69 (256)
T PRK09134          6 MAAPRAALVTGA----------------ARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLA   69 (256)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             999997999488----------------6789999999999879989998499989999999999964991899975589


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             4657789999998505-8887997404444432
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      .-++.+++.+++.+.+ ..|++|.+|.+..+.+
T Consensus        70 ~~~~~~~~v~~~~~~~G~iDiLVnNAg~~~~~~  102 (256)
T PRK09134         70 DEAQVRALVARASAALGPITLLVNNASLFEYDS  102 (256)
T ss_pred             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             999999999999998299878998871168997


No 110
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.91  E-value=0.004  Score=39.87  Aligned_cols=105  Identities=21%  Similarity=0.253  Sum_probs=62.6

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEEEE-----EH
Q ss_conf             179778984042010102135762157727889999999825883899841566--------77-65674675-----46
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVMTI-----HV  255 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~~i-----~v  255 (405)
                      |+||.+|||+|                |+-.|.++|+++...||+|.+..-...        +. ....+..+     .-
T Consensus         1 L~gK~alVTGg----------------s~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~   64 (254)
T PRK07677          1 MKEKVVIITGG----------------SSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP   64 (254)
T ss_pred             CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCH
T ss_conf             95298999587----------------67899999999998799999996999999999999985699099998038999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH
Q ss_conf             57789999998505-888799740444443222210112334557751045521806898
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~  314 (405)
                      ++.+++.+++.+.+ ..|++|.+|+..-..+..    ++.-......+.+.|.-+--+.+
T Consensus        65 ~~v~~~v~~~~~~~g~iDiLVnNAg~~~~~~~~----~~t~~~~~~~~~vnl~g~~~~~~  120 (254)
T PRK07677         65 DDVQKMIEQIDEKFGRIDALINNAAGNFICPAE----DLSVNGWKSVIDIVLNGTFYCSQ  120 (254)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999839988899757557788826----59999999999997231889999


No 111
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.91  E-value=0.0031  Score=40.61  Aligned_cols=82  Identities=26%  Similarity=0.268  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC----CCCCCEEEE-----EHHHH
Q ss_conf             001797789840420101021357621577278899999998258838998415667----765674675-----46577
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI----ADPPNVMTI-----HVERA  258 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~----~~~~~~~~i-----~v~t~  258 (405)
                      ..|+||.+|||+|.                +-.|.++|+.|...||+|.+.......    ....+...+     .-+..
T Consensus         3 grL~gKvalVTGas----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v   66 (254)
T PRK06463          3 GKFKGKVALITGGS----------------RGIGRAIAEKFLKEGAKVAILYNSSEDKAKELKEKGVETFKCDVSNRDQV   66 (254)
T ss_pred             CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCHHHH
T ss_conf             75698989994847----------------78999999999988999999649978999999866988999738999999


Q ss_pred             HHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             89999998505-8887997404444432
Q gi|254780622|r  259 EDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       259 ~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      +++.+++.+.+ ..|++|.+|.+....|
T Consensus        67 ~~~v~~~~~~~G~iDiLVNNAG~~~~~~   94 (254)
T PRK06463         67 RKAKEEIHKKLGRIDVLVNNAGIWYLMP   94 (254)
T ss_pred             HHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             9999999998299989998997789999


No 112
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.91  E-value=0.0037  Score=40.14  Aligned_cols=76  Identities=21%  Similarity=0.205  Sum_probs=47.6

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-------CCCCCE-----EEEEHH
Q ss_conf             01797789840420101021357621577278899999998258838998415667-------765674-----675465
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-------ADPPNV-----MTIHVE  256 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-------~~~~~~-----~~i~v~  256 (405)
                      +|+||.+|||+|                |+-.|.++|+.+...||+|.+.......       +.....     .+-..+
T Consensus         3 ~L~gK~alVTGa----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~   66 (254)
T PRK08642          3 DISEQIVLVTGG----------------SRGLGAAIARAFAREGARVVVNYHRSEDAAEALADELGDRAIAIQADVTDRN   66 (254)
T ss_pred             CCCCCEEEEECH----------------HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHH
T ss_conf             989899999781----------------1199999999999879999996189889999999981994699980699999


Q ss_pred             HHHHHHHHHHHCC--CCCEEEEEHHH
Q ss_conf             7789999998505--88879974044
Q gi|254780622|r  257 RAEDMLQEVLKAL--PVDIAVMVSAV  280 (405)
Q Consensus       257 t~~em~~~~~~~~--~~D~~I~aAAV  280 (405)
                      ..++|.+.+.+.+  +.|++|.+|.+
T Consensus        67 ~~~~~v~~~~~~~G~~idilVnnA~~   92 (254)
T PRK08642         67 QVDAMFATATEHFGKPITTVVNNALA   92 (254)
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCEE
T ss_conf             99999999999949977699867642


No 113
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.89  E-value=0.0059  Score=38.81  Aligned_cols=32  Identities=28%  Similarity=0.370  Sum_probs=12.9

Q ss_pred             CCCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             9888556999-95284789999999999998798899
Q gi|254780622|r    1 MDLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVI   36 (405)
Q Consensus         1 m~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~   36 (405)
                      |+|+||++++ |-+++|    -..+++.|.++|++|.
T Consensus         3 ~~l~gK~~lITGgs~GI----G~aia~~la~~Ga~V~   35 (240)
T PRK07041          3 MSLNDQKVLVVGGSSGI----GLAAARAFAARGADVT   35 (240)
T ss_pred             CCCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEE
T ss_conf             88599989995778889----9999999998799999


No 114
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.88  E-value=0.0041  Score=39.79  Aligned_cols=36  Identities=19%  Similarity=0.305  Sum_probs=22.1

Q ss_pred             CC-CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             98-8855699995284789999999999998798899985
Q gi|254780622|r    1 MD-LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus         1 m~-l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~   39 (405)
                      |. |+||.++  |||+-+-+ --.+++.|-++|+.|.++-
T Consensus         1 Mg~L~gKvvl--ITGASsGI-G~aiA~~~A~~Ga~Vvl~~   37 (324)
T PRK06139          1 MGPLHGAVVV--ITGASSGI-GRATAEAFARRGARLVLAA   37 (324)
T ss_pred             CCCCCCCEEE--EECHHHHH-HHHHHHHHHHCCCEEEEEE
T ss_conf             9985997799--93825499-9999999998799899998


No 115
>PRK05717 oxidoreductase; Validated
Probab=96.88  E-value=0.0071  Score=38.30  Aligned_cols=109  Identities=21%  Similarity=0.156  Sum_probs=64.3

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-------CCCCCCEE--EEEH---
Q ss_conf             00179778984042010102135762157727889999999825883899841566-------77656746--7546---
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-------IADPPNVM--TIHV---  255 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-------~~~~~~~~--~i~v---  255 (405)
                      ..|.||.+|||+|                ||-.|.++|+.|...||+|.+. +.-.       ........  ...|   
T Consensus         6 ~~l~GKvalITG~----------------s~GIG~aia~~la~~Ga~V~i~-~~~~~~~~~~~~~~~~~~~~~~~Dvt~~   68 (255)
T PRK05717          6 PGHNGRVALVTGA----------------ARGIGLGIAAWLIAEGWQVVLA-DLDRERGAKVAKALGENAWFIAMDVADE   68 (255)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHHHHHCCCEEEEEEECCCH
T ss_conf             8999988999587----------------8889999999999879989999-6988999999998489758999307999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH
Q ss_conf             57789999998505-8887997404444432222101123345577510455218068988
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI  315 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~  315 (405)
                      ++.+++.+++.+.+ ..|++|..|++.+..-...  .++.-.+....+.+.|.-.--+.+.
T Consensus        69 ~~v~~~i~~~~~~~G~id~lvnNAg~~~~~~~~l--~~~~~~~w~~~~~vNl~g~f~~~k~  127 (255)
T PRK05717         69 AQVAAGVAEVLGQFGRLDALVCNAAIANPHNTTL--ESLSLAQWNRVLAVNLGGPMLLAKH  127 (255)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH--HHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999998299989998773057899983--5599999999999860426577664


No 116
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.88  E-value=0.0049  Score=39.32  Aligned_cols=50  Identities=22%  Similarity=0.279  Sum_probs=32.7

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHHH-----HHHHHHHHCCCCEEEEE-CCCC
Q ss_conf             79778984042010102135762157727889-----99999982588389984-1566
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGH-----AIAKSLAYFGAEVILIS-GPVS  243 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~-----~iA~~~~~~Ga~V~li~-g~~~  243 (405)
                      .|.=|.|+|.+...+   .-..+-.+.-|-+.     .||.|+...|-.|+.|+ |++.
T Consensus       128 ~G~IvnisS~ag~~~---~p~~~~Y~ASK~Al~~lt~sLa~El~~~gIrVn~V~PG~v~  183 (275)
T PRK08263        128 SGHIIQISSIGGISA---FPMVGIYHASKWALEGFSEALAQEVAHFGIKVTLVEPGGYS  183 (275)
T ss_pred             CCEEEEECCHHHCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
T ss_conf             977999457010567---99970799999999999999999840339689999708875


No 117
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.88  E-value=0.0043  Score=39.67  Aligned_cols=122  Identities=19%  Similarity=0.232  Sum_probs=66.6

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC---------C-CCCCEEEE-----
Q ss_conf             01797789840420101021357621577278899999998258838998415667---------7-65674675-----
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI---------A-DPPNVMTI-----  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~---------~-~~~~~~~i-----  253 (405)
                      .+.||.+|||+|.               +| .|.++|+.|...||+|.+.......         . ....+..+     
T Consensus         2 ~~sgK~alVTGgs---------------~G-IG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   65 (245)
T PRK12937          2 TDSNKVAIVTGAS---------------RG-IGAAIARRLAADGFAVAVNYAGSAAMADELVEEIEAAGGRAIAVQADVA   65 (245)
T ss_pred             CCCCCEEEEECCC---------------CH-HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             9999889994857---------------78-9999999999879999997699868999999999965995899983789


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             4657789999998505-8887997404444432222101123345577510455218068988762148995899981
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFA  330 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFk  330 (405)
                      +-+..+.+.+.+.+.+ ..|++|.+|.+....+  ..+.  .-+++...+.+.|.-.--+.+...++-.....+|-+.
T Consensus        66 ~~~~~~~~v~~~~~~~g~iDilVnNAg~~~~~~--~~~~--~~e~w~~~~~vNl~~~~~~~~~~~~~m~~~G~IInis  139 (245)
T PRK12937         66 DAAAVDRLFEAAETAFGRIDVLVNSAGIMPLAP--IADG--DLEGFDRTIAVNLRGAFNVLGEAARHLRRGGRIINLS  139 (245)
T ss_pred             CHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC--HHHC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             999999999999998199889998054899988--1349--9999999999985999999999999997288299997


No 118
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.87  E-value=0.0029  Score=40.78  Aligned_cols=83  Identities=28%  Similarity=0.309  Sum_probs=53.7

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEEEE----
Q ss_conf             200179778984042010102135762157727889999999825883899841566--------77-65674675----
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVMTI----  253 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~~i----  253 (405)
                      ..+|+||.+|||+|+                +=.|.++|+.+.+.||+|.+..-...        +. .......+    
T Consensus         4 ~~~L~gKvalVTGas----------------~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv   67 (258)
T PRK06949          4 SINLEGKVALVTGAS----------------SGLGQRFAQVLSQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDV   67 (258)
T ss_pred             CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             887899989995857----------------7999999999998799999996988999999999996599289998268


Q ss_pred             -EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             -4657789999998505-8887997404444432
Q gi|254780622|r  254 -HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       254 -~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                       +-++.+.+.+++.+.+ ..|++|.+|+++-+.+
T Consensus        68 ~~~~~v~~~v~~~~~~~G~iDiLVnnAG~~~~~~  101 (258)
T PRK06949         68 TDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQK  101 (258)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             9999999999999998499989998998899989


No 119
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.87  E-value=0.0046  Score=39.49  Aligned_cols=34  Identities=26%  Similarity=0.384  Sum_probs=17.9

Q ss_pred             CCCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             9888556999-9528478999999999999879889998
Q gi|254780622|r    1 MDLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVIPV   38 (405)
Q Consensus         1 m~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~vv   38 (405)
                      |+|+||.+++ |-+++|    -..+++.|-++|++|.+.
T Consensus         2 m~L~gKvalVTGas~GI----G~aiA~~la~~Ga~Vvi~   36 (273)
T PRK08278          2 MSLSGKTLFITGASRGI----GLAIALRAARDGANIVIA   36 (273)
T ss_pred             CCCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEEEE
T ss_conf             89899989994876599----999999999879989999


No 120
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.87  E-value=0.0056  Score=38.94  Aligned_cols=17  Identities=29%  Similarity=0.202  Sum_probs=9.1

Q ss_pred             HHHHHHHHCCCCEEEEE
Q ss_conf             99999982588389984
Q gi|254780622|r  223 AIAKSLAYFGAEVILIS  239 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~  239 (405)
                      .+|.|+..+|-.|..|+
T Consensus       167 slA~Ela~~gIRVNaVa  183 (227)
T PRK08862        167 SWAKELTPFNIRVGGVV  183 (227)
T ss_pred             HHHHHHHHHCCEEEEEE
T ss_conf             99999767498999994


No 121
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.87  E-value=0.005  Score=39.24  Aligned_cols=33  Identities=21%  Similarity=0.262  Sum_probs=17.4

Q ss_pred             CCCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             9888556999-952847899999999999987988999
Q gi|254780622|r    1 MDLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVIP   37 (405)
Q Consensus         1 m~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~v   37 (405)
                      |.|+||++++ |-+++|-    ..+++.|.++|++|.+
T Consensus         1 m~l~gK~~lVTGas~GIG----~aiA~~la~~Ga~V~i   34 (238)
T PRK05786          1 MRLKGKNVLIVGVSPGLG----YAVAYFALREGASVYA   34 (238)
T ss_pred             CCCCCCEEEEECCCCHHH----HHHHHHHHHCCCEEEE
T ss_conf             987998899928987899----9999999987999999


No 122
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.86  E-value=0.0041  Score=39.82  Aligned_cols=81  Identities=23%  Similarity=0.262  Sum_probs=51.3

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC-------CCCCCCCEE--EE--EH--
Q ss_conf             017977898404201010213576215772788999999982588389984156-------677656746--75--46--
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV-------SIADPPNVM--TI--HV--  255 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~-------~~~~~~~~~--~i--~v--  255 (405)
                      +|+||.++||+|+               || .|.++|+.|..+|++|.+..-..       ......+.+  .+  .|  
T Consensus         3 ~~~gKvavITGaa---------------sG-IG~a~A~~la~~Ga~Vvi~d~~~~~l~~~~~~l~~~g~~~~~~~~Dvt~   66 (275)
T PRK05876          3 GFPGRGAVITGGA---------------SG-IGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH   66 (275)
T ss_pred             CCCCCEEEEECCC---------------CH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             9899879992826---------------69-9999999999879989999798899999999998269847999788899


Q ss_pred             -HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             -57789999998505-8887997404444432
Q gi|254780622|r  256 -ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       256 -~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                       +..+.+.+++.+.+ +.|++|..|.+....+
T Consensus        67 ~~~v~~l~~~~~~~~G~iDilvnNAGi~~~~~   98 (275)
T PRK05876         67 REEVTHLADEAFRLLGHVDVVFSNAGIVVGGP   98 (275)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC
T ss_conf             99999999999998489885121574468987


No 123
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.85  E-value=0.0062  Score=38.68  Aligned_cols=33  Identities=33%  Similarity=0.342  Sum_probs=17.5

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             1797789840420101021357621577278899999998258838998
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li  238 (405)
                      |+||.+|||+|.                +-.|.++|+.+...||+|.+.
T Consensus         3 L~gK~alVTG~s----------------~GIG~aia~~la~~Ga~V~i~   35 (258)
T PRK07890          3 LKDKVVVVSGVG----------------PGLGTTLAVRAAREGADVVLA   35 (258)
T ss_pred             CCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEE
T ss_conf             899889996856----------------589999999999879989999


No 124
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.85  E-value=0.0055  Score=39.00  Aligned_cols=81  Identities=27%  Similarity=0.325  Sum_probs=51.9

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C-CCCCEEEE-----EHHH
Q ss_conf             179778984042010102135762157727889999999825883899841566-7-----7-65674675-----4657
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A-DPPNVMTI-----HVER  257 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~-~~~~~~~i-----~v~t  257 (405)
                      +.||.+|||+|.                +=.|.++|+.|..+||+|.+..-... +     + ...++..+     +.+.
T Consensus         3 ~~GKvalITGas----------------~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~~~~~~~Dv~d~~~   66 (235)
T PRK07326          3 GNGKAALVTGGS----------------KGIGFAVAEALAAAGYRVAICARDESELEAAAQELGKRNVLGLACDVRDEAD   66 (235)
T ss_pred             CCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHHH
T ss_conf             999899993826----------------7999999999998799999998988999999998423986999963899999


Q ss_pred             HHHHHHHHHHCC-CCCEEEEEHHHHHHHHH
Q ss_conf             789999998505-88879974044444322
Q gi|254780622|r  258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRFP  286 (405)
Q Consensus       258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~~  286 (405)
                      .+.+.+.+.+.+ ..|++|.+|.+..+.+-
T Consensus        67 v~~~v~~~~~~~G~iDiLVNNAGi~~~~~~   96 (235)
T PRK07326         67 VRQAVDAHVEAFGGLDILVNNAGVGHFAPV   96 (235)
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCCCCCCH
T ss_conf             999999999982996699988877899882


No 125
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.84  E-value=0.0052  Score=39.17  Aligned_cols=108  Identities=17%  Similarity=0.138  Sum_probs=62.6

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC----------CCC-CCCEEEE--
Q ss_conf             200179778984042010102135762157727889999999825883899841566----------776-5674675--
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS----------IAD-PPNVMTI--  253 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~----------~~~-~~~~~~i--  253 (405)
                      +.+|+||.+|||+|.                +=+|.++|+.|...||+|.+..-...          ... ...+..+  
T Consensus         3 ~~~L~gK~alITG~s----------------~GIG~a~a~~la~~Ga~Vvi~~r~~~~l~~~~~~l~~~~~~~~~~~~~~   66 (265)
T PRK07062          3 QIQLEGRVAVVTGGS----------------SGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARC   66 (265)
T ss_pred             CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             778899989995757----------------7999999999998799999997988999999999987369965999975


Q ss_pred             ---EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH
Q ss_conf             ---4657789999998505-888799740444443222210112334557751045521806898
Q gi|254780622|r  254 ---HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       254 ---~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~  314 (405)
                         .-+..+.+.+++.+.+ ..|++|.+|......+-  .+  ..-.+..+.+.+.|.-.--..+
T Consensus        67 Dvt~~~~v~~~v~~~~~~~G~iDiLVnNAg~~~~~~~--~~--~~~e~w~~~~~~nl~~~~~~~~  127 (265)
T PRK07062         67 DVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTF--AD--TTDDAWRDELELKYFSVIRPTR  127 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH--HH--CCHHHHHHHHHHHHHHHHHHHH
T ss_conf             7999999999999999983998889977888898884--87--9999999999872145899999


No 126
>KOG1201 consensus
Probab=96.83  E-value=0.0049  Score=39.33  Aligned_cols=190  Identities=21%  Similarity=0.187  Sum_probs=98.7

Q ss_pred             HHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC--CCCCC---CC---CE
Q ss_conf             986310132001797789840420101021357621577278899999998258838998415--66776---56---74
Q gi|254780622|r  179 TWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP--VSIAD---PP---NV  250 (405)
Q Consensus       179 ~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~--~~~~~---~~---~~  250 (405)
                      ...+...+..+.+|+.||||+||                +=.|.++|.++.+||+.+.+.-=.  ...+.   ..   .+
T Consensus        25 ~~~~l~~~~k~v~g~~vLITGgg----------------~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~   88 (300)
T KOG1201          25 IKLLLPKPLKSVSGEIVLITGGG----------------SGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEA   88 (300)
T ss_pred             HHHHCCCCHHHCCCCEEEEECCC----------------CHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCE
T ss_conf             98755543344069889996898----------------60789999999970784899955651239999999844852


Q ss_pred             EEE--EHHHHHH---HHHHHHHCC-CCCEEEEEHHHHHHHHHH-HHHCCCCCCCCCCCCEEEEEE----CHHHHHHHHHC
Q ss_conf             675--4657789---999998505-888799740444443222-210112334557751045521----80689887621
Q gi|254780622|r  251 MTI--HVERAED---MLQEVLKAL-PVDIAVMVSAVSDWRFPK-IAGTKIKRKDIGDTMRIDLME----NPDILKIIGHH  319 (405)
Q Consensus       251 ~~i--~v~t~~e---m~~~~~~~~-~~D~~I~aAAVSDf~~~~-~~~~Kikk~s~~~~l~L~L~~----~pdIL~~i~~~  319 (405)
                      +.+  ++..-+|   +.+++.++. +.|++|-.|+|.-.+.-- .++..+.|     .+.+.+.-    +.-.|-.+-++
T Consensus        89 ~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k-----~~~vN~~~~f~t~kaFLP~M~~~  163 (300)
T KOG1201          89 KAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQK-----TFDVNTIAHFWTTKAFLPKMLEN  163 (300)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             5899558988999999999998619954998366424488756799899999-----99876689999999873888745


Q ss_pred             CCCCCEEEEEE--C-CC---C------------HHHHHHHHHHHHCCCCEE-----EEECCCCCCCCCCCCCEEEEEECC
Q ss_conf             48995899981--1-41---2------------389999999997499899-----992057767777766118999836
Q gi|254780622|r  320 QCRPSIVVGFA--A-ET---Q------------CIEQNAREKLLNKGADFI-----VSNCILPDTGFVGKEWNKVSIVFP  376 (405)
Q Consensus       320 k~~~~~lVGFk--a-ET---~------------~l~~~A~~Kl~~K~~D~I-----VAN~i~~~~~~fgsd~n~v~li~~  376 (405)
                        ++..+|--+  | ..   +            -..+-...-++..++|-|     +...+.  .+.|..        ..
T Consensus       164 --~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~--Tgmf~~--------~~  231 (300)
T KOG1201         164 --NNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN--TGMFDG--------AT  231 (300)
T ss_pred             --CCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC--CCCCCC--------CC
T ss_conf             --796399835533135776532356518999999999999998538987269998432213--554478--------98


Q ss_pred             CCEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             9859727899899999999999998
Q gi|254780622|r  377 DKIEEYPELPKAEVADRLCHLIVEH  401 (405)
Q Consensus       377 ~~~~~~~~~sK~~iA~~Il~~i~~~  401 (405)
                      ....-+|..+=+.+|++|++.+..+
T Consensus       232 ~~~~l~P~L~p~~va~~Iv~ai~~n  256 (300)
T KOG1201         232 PFPTLAPLLEPEYVAKRIVEAILTN  256 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             8864368779799999999999819


No 127
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.81  E-value=0.0069  Score=38.38  Aligned_cols=35  Identities=34%  Similarity=0.480  Sum_probs=22.7

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             017977898404201010213576215772788999999982588389984
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~  239 (405)
                      +|+||++|||+|.                +=+|.++|+.|...||+|.+..
T Consensus         4 ~l~gK~alITG~s----------------~GIG~aiA~~la~~Ga~V~i~~   38 (259)
T PRK06125          4 HLAGKRVLITGAS----------------KGIGAAAAEAFAAEGCHLVLAA   38 (259)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEE
T ss_conf             8699989996877----------------6899999999998799899997


No 128
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=96.81  E-value=0.0021  Score=41.75  Aligned_cols=28  Identities=29%  Similarity=0.266  Sum_probs=20.2

Q ss_pred             EEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             99528478999999999999879889998585
Q gi|254780622|r   10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus        10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      .|-||=|    .-.|+++|.+.|++|+++.-.
T Consensus         6 TGgtGfi----G~~l~~~L~~~G~~V~~l~r~   33 (328)
T TIGR03466         6 TGATGFV----GSAVVRLLLERGEEVRVLVRP   33 (328)
T ss_pred             ECCCCHH----HHHHHHHHHHCCCEEEEEECC
T ss_conf             8677799----999999999784989999899


No 129
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.81  E-value=0.0058  Score=38.84  Aligned_cols=103  Identities=18%  Similarity=0.221  Sum_probs=60.6

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C--------CCCCCEEEE-----
Q ss_conf             00179778984042010102135762157727889999999825883899841566-7--------765674675-----
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I--------ADPPNVMTI-----  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~--------~~~~~~~~i-----  253 (405)
                      .+|+||.+|||+|                |+=.|.++|+.|...||+|.+..-... .        .....+..+     
T Consensus         3 ~~L~gKvalVTGa----------------s~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs   66 (253)
T PRK06172          3 MTFSGQVALVTGG----------------AAGIGRATAIAFAREGAKVVVADRDAAGGEETVALIREAGGEALFIACDVT   66 (253)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             8869998999375----------------768999999999987998999979889999999999964993799981899


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
Q ss_conf             4657789999998505-8887997404444432222101123345577510455218
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN  309 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~  309 (405)
                      +-+..+++.+++.+.+ ..|++|.+|++.....+ ..+  +.-+++...+.+.|.-.
T Consensus        67 ~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~-~~~--~~~e~w~~~~~vNl~g~  120 (253)
T PRK06172         67 RDAEVKALVEKTIAAYGRLDYAFNNAGIEIEQGR-LAE--GSEAEFDAIMGVNVKGV  120 (253)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC-CHH--CCHHHHHHHHHHHHHHH
T ss_conf             9999999999999982999999989888999999-013--99999999999973999


No 130
>PRK08324 short chain dehydrogenase; Validated
Probab=96.81  E-value=0.008  Score=37.95  Aligned_cols=109  Identities=23%  Similarity=0.177  Sum_probs=66.3

Q ss_pred             CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC--------CCCCCCCE-----EE
Q ss_conf             320017977898404201010213576215772788999999982588389984156--------67765674-----67
Q gi|254780622|r  186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV--------SIADPPNV-----MT  252 (405)
Q Consensus       186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~--------~~~~~~~~-----~~  252 (405)
                      ++..|.||-+|||+|                +|-.|.++|+.+...||.|.+.--..        .+.....+     .+
T Consensus       415 ~~~~L~GKVALVTGg----------------a~GIG~A~A~~fa~eGA~Vvl~D~~~~~l~~~a~el~~~~~~~~~~~DV  478 (676)
T PRK08324        415 KPKPLAGKVALVTGA----------------AGGIGLATAKRLAAEGACVVLADIDEEAAEAAAAELGGRDRALGVACDV  478 (676)
T ss_pred             CCCCCCCCEEEEECC----------------CCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             998889987999479----------------8816299999999879989999588899999999970799479998068


Q ss_pred             EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH
Q ss_conf             54657789999998505-888799740444443222210112334557751045521806898
Q gi|254780622|r  253 IHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       253 i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~  314 (405)
                      ..-.+.+.+.+++.+.+ ..|++|.+|.++...+-.    .+.-......+.+.|.-.--+.+
T Consensus       479 td~~~v~~~v~~~~~~fGgIDiLVnNAGi~~~~~~~----e~s~e~w~~~~~vNl~g~f~~~r  537 (676)
T PRK08324        479 TDEAAVQAAFEEAALAFGGVDIVVSNAGIALSGPIG----ETSDELWRRSFEVNFTGHFLVAR  537 (676)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999859988899767778998826----59999999999886099999999


No 131
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.80  E-value=0.0078  Score=38.03  Aligned_cols=77  Identities=25%  Similarity=0.245  Sum_probs=45.6

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE-----EHHH
Q ss_conf             0179778984042010102135762157727889999999825883899841566------7765674675-----4657
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI-----HVER  257 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i-----~v~t  257 (405)
                      +|+||.+|||+|.                +-.|.++|+.+...||+|.+..-...      .........+     .-+.
T Consensus         3 ~L~gKvalVTGgs----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   66 (261)
T PRK08265          3 GLAGKVAIVTGGA----------------TLIGAAVARALVAAGACVAILDIDADNGAAVAASLGERARFIATDITDDAA   66 (261)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCHHH
T ss_conf             9999989994877----------------689999999999879989999798899999999819972899813899999


Q ss_pred             HHHHHHHHHHCC-CCCEEEEEHHHH
Q ss_conf             789999998505-888799740444
Q gi|254780622|r  258 AEDMLQEVLKAL-PVDIAVMVSAVS  281 (405)
Q Consensus       258 ~~em~~~~~~~~-~~D~~I~aAAVS  281 (405)
                      .+++.+.+.+.+ ..|++|.+|+..
T Consensus        67 i~~~~~~~~~~fG~iDiLVNNAg~~   91 (261)
T PRK08265         67 IERAVATAVARFGGLDILVNLACTY   91 (261)
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             9999999999819987899857557


No 132
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.79  E-value=0.0065  Score=38.53  Aligned_cols=20  Identities=30%  Similarity=0.316  Sum_probs=9.7

Q ss_pred             HHHHHHHHHHHHCCCCEEEE
Q ss_conf             78899999998258838998
Q gi|254780622|r  219 QQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       219 k~G~~iA~~~~~~Ga~V~li  238 (405)
                      -.|.++|+.+...||+|.+.
T Consensus        19 GIG~aia~~la~~Ga~V~i~   38 (260)
T PRK07576         19 GINLGIAQAFARAGANVAVA   38 (260)
T ss_pred             HHHHHHHHHHHHCCCEEEEE
T ss_conf             99999999999879999999


No 133
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.78  E-value=0.0055  Score=39.00  Aligned_cols=81  Identities=31%  Similarity=0.391  Sum_probs=48.7

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--C------CCCC--EEEE-----
Q ss_conf             01797789840420101021357621577278899999998258838998415667--7------6567--4675-----
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--A------DPPN--VMTI-----  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--~------~~~~--~~~i-----  253 (405)
                      +|+||.+|||+|+                +-.|.++|+.|...||+|.+-......  +      ...+  +..+     
T Consensus         3 ~L~gKvalVTG~s----------------~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs   66 (247)
T PRK12935          3 QLNGKVAIVTGGA----------------KGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVS   66 (247)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             8896989991727----------------689999999999879989997699989999999999843995899985799


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             4657789999998505-8887997404444432
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      ..+..+++.+++.+.+ +.|++|.+|.+....+
T Consensus        67 ~~~~~~~~v~~~~~~~G~iDiLVNNAGi~~~~~   99 (247)
T PRK12935         67 KVEDANRLVEEAVNHFGKVDILVNNAGITRDRT   99 (247)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf             999999999999998399989998998899999


No 134
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.78  E-value=0.0099  Score=37.37  Aligned_cols=33  Identities=33%  Similarity=0.378  Sum_probs=14.3

Q ss_pred             CCCCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             988855699-9952847899999999999987988999
Q gi|254780622|r    1 MDLSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIP   37 (405)
Q Consensus         1 m~l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~v   37 (405)
                      |+|+||.++ -|-+++|    -..+++.|-+.|++|.+
T Consensus         4 l~L~gK~alITG~s~GI----G~aiA~~la~~Ga~V~i   37 (263)
T PRK08339          4 IDLSGKLAFTTASSKGI----GFGVARVLARAGADVII   37 (263)
T ss_pred             CCCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEEE
T ss_conf             17899989991626099----99999999986999999


No 135
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.78  E-value=0.006  Score=38.78  Aligned_cols=106  Identities=25%  Similarity=0.307  Sum_probs=63.7

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC--CCCCEEEE-----
Q ss_conf             0179778984042010102135762157727889999999825883899841566--------77--65674675-----
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA--DPPNVMTI-----  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~--~~~~~~~i-----  253 (405)
                      .|+||.+|||+|+.                =.|.++|+.|...||+|.+..-...        +.  ....+..+     
T Consensus         4 rL~gKvalVTGa~~----------------GIG~aiA~~~a~~Ga~V~i~~~~~~~~~~~~~~l~~~~g~~~~~~~~Dvt   67 (259)
T PRK07063          4 RLAGKVALVTGAAQ----------------GIGAAIARAFVREGAAVALADLDAALAERAAAAIARQTGARVLALPADVT   67 (259)
T ss_pred             CCCCCEEEEECCCC----------------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             35998899958787----------------89999999999879989999798789999999998850991899983689


Q ss_pred             EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH
Q ss_conf             4657789999998505-888799740444443222210112334557751045521806898
Q gi|254780622|r  254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~  314 (405)
                      +-+..+++.+++.+.+ ..|++|-+|.++.+.+..  +  ..-.++...+.+.|.-.--..+
T Consensus        68 ~~~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~f~~~~  125 (259)
T PRK07063         68 RAASVRAAVARAEAAFGPLDVLVNNAGINVFADPL--A--MTDEDWRRCFAVDLDGAWNCCR  125 (259)
T ss_pred             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999819988999899778999904--4--9999999999875288999999


No 136
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.76  E-value=0.0078  Score=38.01  Aligned_cols=79  Identities=22%  Similarity=0.246  Sum_probs=51.5

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCC----EEEEEHHHH
Q ss_conf             00179778984042010102135762157727889999999825883899841566-----776567----467546577
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-----IADPPN----VMTIHVERA  258 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-----~~~~~~----~~~i~v~t~  258 (405)
                      +.|+||.+|||+|+                +=.|.++|+.+...||+|.+..-...     ......    ..+-.-+..
T Consensus         3 ~rL~gKvalVTGas----------------~GIG~aia~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   66 (255)
T PRK06057          3 QRLAGRVAVITGGA----------------SGIGLATARRMRAEGATVVVGDIDPEAGKAAADELGGLFVQVDVTDEDAV   66 (255)
T ss_pred             CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCHHHH
T ss_conf             88899989996848----------------88999999999986998999969889999999864997999816999999


Q ss_pred             HHHHHHHHHCC-CCCEEEEEHHHHH
Q ss_conf             89999998505-8887997404444
Q gi|254780622|r  259 EDMLQEVLKAL-PVDIAVMVSAVSD  282 (405)
Q Consensus       259 ~em~~~~~~~~-~~D~~I~aAAVSD  282 (405)
                      +++.+++.+.+ ..|++|.+|.++.
T Consensus        67 ~~~v~~~~~~~G~iDiLVNnAGi~~   91 (255)
T PRK06057         67 NALFDTAAETYGSVDIAFNNAGISP   91 (255)
T ss_pred             HHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf             9999999998199878998885578


No 137
>PRK06227 consensus
Probab=96.76  E-value=0.0064  Score=38.58  Aligned_cols=102  Identities=21%  Similarity=0.241  Sum_probs=61.1

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----C--CCCCEE--EE-----E
Q ss_conf             01797789840420101021357621577278899999998258838998415667-----7--656746--75-----4
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----A--DPPNVM--TI-----H  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----~--~~~~~~--~i-----~  254 (405)
                      +|+||.+|||+|+               + =.|.++|+.+...||+|.+..-....     .  ...+.+  .+     .
T Consensus         2 ~L~gKvalVTGas---------------~-GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~   65 (256)
T PRK06227          2 NLSGKVAIVTGGG---------------Q-GIGAAIAQTFAENGAKVVIADIDEEAGLEREEMLRSNGLDALFVKTDVSD   65 (256)
T ss_pred             CCCCCEEEEECCC---------------C-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             8999889995866---------------8-89999999999879999999698889999999999559918999816899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH
Q ss_conf             657789999998505-88879974044444322221011233455775104552180
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP  310 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p  310 (405)
                      -+..+.+.+++.+.+ ..|++|-+|.+..+.+-.  +  +.-.++...+.+.|.-+-
T Consensus        66 ~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~--~--~~~e~w~~~~~vNl~g~f  118 (256)
T PRK06227         66 EEDVKNMVRKTVERYGGIDILINNAGIFSGKSIF--E--RTLEEWERVIRVNLTGPY  118 (256)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHH
T ss_conf             9999999999999829997999899899998903--4--989999999999829999


No 138
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.75  E-value=0.0072  Score=38.25  Aligned_cols=18  Identities=28%  Similarity=0.408  Sum_probs=10.3

Q ss_pred             HHHHHHHHHCCCCEEEEE
Q ss_conf             999999982588389984
Q gi|254780622|r  222 HAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       222 ~~iA~~~~~~Ga~V~li~  239 (405)
                      ..+|.++..+|-.|..|+
T Consensus       165 ~~la~ela~~gIrvn~v~  182 (248)
T PRK07806        165 RALRPELAHAGIGFVVVS  182 (248)
T ss_pred             HHHHHHHHHHCCEEEEEE
T ss_conf             999999776598899972


No 139
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.73  E-value=0.0076  Score=38.09  Aligned_cols=36  Identities=22%  Similarity=0.290  Sum_probs=20.3

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             888556999952847899999999999987988999858
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      .|+||.|+  |||+-+-+ .-.+++.|-+.|+.|.++--
T Consensus         5 ~l~~KvVv--ITGASsGI-Gra~A~~fA~~Ga~Vvl~aR   40 (338)
T PRK07109          5 PLGRQVVV--ITGASAGV-GRATARAFARRGAKVVLLAR   40 (338)
T ss_pred             CCCCCEEE--EECCCCHH-HHHHHHHHHHCCCEEEEEEC
T ss_conf             06989899--94843499-99999999987998999989


No 140
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.71  E-value=0.0082  Score=37.87  Aligned_cols=32  Identities=28%  Similarity=0.566  Sum_probs=16.2

Q ss_pred             CCCCCCEEEEE-EEC--HHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             98885569999-528--4789999999999998798899
Q gi|254780622|r    1 MDLSGKKIALI-MCG--SVAVYKSLDLIRRLRERGAVVI   36 (405)
Q Consensus         1 m~l~~k~Illg-vtG--siaa~k~~~l~~~L~~~g~~V~   36 (405)
                      |+|+||++++- .+|  +|-    ..+++.|.+.|++|.
T Consensus         2 ~~L~gK~~lVTGaag~rGIG----~aiA~~la~~Ga~Vv   36 (256)
T PRK08594          2 LSLEGKTYVVMGVANKRSIA----WGIARSLHNAGAKLV   36 (256)
T ss_pred             CCCCCCEEEEECCCCCCHHH----HHHHHHHHHCCCEEE
T ss_conf             89999889998999996399----999999998799999


No 141
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.70  E-value=0.0083  Score=37.84  Aligned_cols=76  Identities=28%  Similarity=0.333  Sum_probs=46.8

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C---------CCCCCEEEE--EHH
Q ss_conf             0179778984042010102135762157727889999999825883899841566-7---------765674675--465
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I---------ADPPNVMTI--HVE  256 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~---------~~~~~~~~i--~v~  256 (405)
                      .|+||.+|||+|.                +-.|.++|+++.+.||+|.++.-... +         ...+....+  .+.
T Consensus         3 ~L~gK~~lITGas----------------~GIG~aiA~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~d~~   66 (239)
T PRK08703          3 TLSDKTILVTGAS----------------QGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLM   66 (239)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECC
T ss_conf             8596989994886----------------289999999999879989999798889999999999737995499998505


Q ss_pred             -----HHHHHHHHHHHCC--CCCEEEEEHHH
Q ss_conf             -----7789999998505--88879974044
Q gi|254780622|r  257 -----RAEDMLQEVLKAL--PVDIAVMVSAV  280 (405)
Q Consensus       257 -----t~~em~~~~~~~~--~~D~~I~aAAV  280 (405)
                           ..+++...+.+..  ..|++|.+|..
T Consensus        67 ~~~~~~~~~~~~~~~~~~~G~lD~lvnnAG~   97 (239)
T PRK08703         67 SAEEKEFEQFAATIAEATQGKLDGIVHCAGY   97 (239)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf             6307899999999999837997689966654


No 142
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.70  E-value=0.0083  Score=37.87  Aligned_cols=17  Identities=24%  Similarity=-0.027  Sum_probs=8.3

Q ss_pred             HHHHHHHHCCCCEEEEE
Q ss_conf             99999982588389984
Q gi|254780622|r  223 AIAKSLAYFGAEVILIS  239 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~  239 (405)
                      .+|.++..+|-.|-.|+
T Consensus       173 ~lA~Ela~~gIrVNaV~  189 (277)
T PRK05875        173 LAADELGPSWVRVNSIR  189 (277)
T ss_pred             HHHHHHHHCCEEEEEEE
T ss_conf             99999710696999986


No 143
>PRK07479 consensus
Probab=96.70  E-value=0.0084  Score=37.83  Aligned_cols=33  Identities=42%  Similarity=0.550  Sum_probs=19.1

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             1797789840420101021357621577278899999998258838998
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li  238 (405)
                      |+||.+|||+|                |+-.|.++|+.|...|++|.+.
T Consensus         3 L~gK~alITGg----------------s~GIG~a~a~~la~~G~~V~i~   35 (252)
T PRK07479          3 LSGKVAIVTGA----------------GSGFGEGIAKRFAREGAKVVVA   35 (252)
T ss_pred             CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEE
T ss_conf             79988999388----------------7689999999999879999999


No 144
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.68  E-value=0.0092  Score=37.57  Aligned_cols=84  Identities=21%  Similarity=0.173  Sum_probs=52.9

Q ss_pred             CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CC-CCCCEEE------
Q ss_conf             3200179778984042010102135762157727889999999825883899841566------77-6567467------
Q gi|254780622|r  186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IA-DPPNVMT------  252 (405)
Q Consensus       186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~-~~~~~~~------  252 (405)
                      ..-.|+||.+|||+|.                +-.|.++|+.+...||+|.+..-...      .. .-.+.+.      
T Consensus         5 ~~~~L~gKvalVTGas----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~~~~~~~~D   68 (255)
T PRK06113          5 DNLRLDGKCAIITGAG----------------AGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD   68 (255)
T ss_pred             CCCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             8767999989995887----------------789999999999879999999698899999999999659908999836


Q ss_pred             -EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             -54657789999998505-8887997404444432
Q gi|254780622|r  253 -IHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       253 -i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                       -+-.+.+.+.+.+.+.+ ..|++|..|.....+|
T Consensus        69 v~~~~~~~~~v~~~~~~~G~iDilVnNAG~~~~~~  103 (255)
T PRK06113         69 ITSEQELSALADFAVSKLGKVDILVNNAGGGGPKP  103 (255)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             89999999999999998199889998788789987


No 145
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.67  E-value=0.0077  Score=38.07  Aligned_cols=81  Identities=22%  Similarity=0.293  Sum_probs=49.2

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C---CCCCEEEE-----E
Q ss_conf             0179778984042010102135762157727889999999825883899841566-7-----7---65674675-----4
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A---DPPNVMTI-----H  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~---~~~~~~~i-----~  254 (405)
                      .|+||.+|||+|.                +=.|.++|+.|...||+|.+..-... +     +   ....+..+     +
T Consensus         3 ~L~gKvalVTGas----------------~GIG~aiA~~la~~Ga~Vvi~~r~~~~l~~~~~ei~~~g~~~~~~~~Dvt~   66 (254)
T PRK07478          3 LLNGKVAIITGAS----------------SGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD   66 (254)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             8899879995887----------------689999999999879999999798899999999999649908999768999


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHH-HHHH
Q ss_conf             657789999998505-888799740444-4432
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVS-DWRF  285 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVS-Df~~  285 (405)
                      -+..+++.+++.+.+ ..|++|..|.+. ++.+
T Consensus        67 ~~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~   99 (254)
T PRK07478         67 EAYAKALVALAVERFGGLDIAFNNAGILGEMGP   99 (254)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf             999999999999984999899988743689989


No 146
>PRK06128 oxidoreductase; Provisional
Probab=96.67  E-value=0.0073  Score=38.22  Aligned_cols=110  Identities=22%  Similarity=0.250  Sum_probs=65.2

Q ss_pred             CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---------CCCCEEE--E--
Q ss_conf             20017977898404201010213576215772788999999982588389984156677---------6567467--5--
Q gi|254780622|r  187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---------DPPNVMT--I--  253 (405)
Q Consensus       187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---------~~~~~~~--i--  253 (405)
                      ...|+||.+|||+|                |.=.|.++|+.|.+.||+|.+.+-+....         ...+.+.  +  
T Consensus        50 ~grL~GKvAlVTGg----------------ssGIG~AiA~~lA~eGA~Vvi~~~~~~~~~a~~~~~~i~~~G~~a~~v~~  113 (300)
T PRK06128         50 FGRLQGRKALITGA----------------DSGIGRATAIAFAREGADIVLNYLPEEEQDAAEVVQLIQAEGRKAVAVPG  113 (300)
T ss_pred             CCCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             88789995899173----------------66999999999998699999942995567899999999965981899974


Q ss_pred             ---EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH
Q ss_conf             ---4657789999998505-8887997404444432222101123345577510455218068988
Q gi|254780622|r  254 ---HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI  315 (405)
Q Consensus       254 ---~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~  315 (405)
                         .-...+++.+++.+.+ ..|++|-+|+...+..+ ..+  +.-..+...+.+.|.-.--+.+.
T Consensus       114 Dvsd~~~~~~~v~~~~~~~G~iDiLVNNAG~~~~~~~-~~~--~~~e~w~~~~~vNl~g~f~~~~a  176 (300)
T PRK06128        114 DLKDEAFCRQLVERAVKELGGLDILVNIAGKQTARKD-IAD--ITTEQFDATFKTNVYAMFWLCKA  176 (300)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC-HHH--CCHHHHHHHHHHCCHHHHHHHHH
T ss_conf             7899999999999999980999989989999778999-177--99999999986611589999999


No 147
>PRK08589 short chain dehydrogenase; Validated
Probab=96.65  E-value=0.011  Score=37.17  Aligned_cols=79  Identities=19%  Similarity=0.247  Sum_probs=40.2

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEEE-----EH
Q ss_conf             017977898404201010213576215772788999999982588389984156677--------65674675-----46
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMTI-----HV  255 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~i-----~v  255 (405)
                      .|+||.+|||+|+                +=.|.++|+.|...||+|.+..-.-...        ....+..+     .-
T Consensus         3 rL~gKvalVTGas----------------~GIG~aiA~~la~~Ga~Vv~~d~~~~~~~~~~~i~~~g~~~~~~~~Dvsd~   66 (272)
T PRK08589          3 RLENKVAVITGAS----------------TGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDE   66 (272)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCH
T ss_conf             9997989997825----------------699999999999869999998382789999999995599489999607999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHH
Q ss_conf             57789999998505-88879974044444
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDW  283 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf  283 (405)
                      ++.+++.+++.+.+ ..|++|.+|.+...
T Consensus        67 ~~v~~~v~~~~~~~G~iDiLVNNAGi~~~   95 (272)
T PRK08589         67 QQVKDFASDIKEQFGHIDVLFNNAGVDNA   95 (272)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             99999999999982998789989866788


No 148
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.62  E-value=0.0083  Score=37.85  Aligned_cols=79  Identities=30%  Similarity=0.272  Sum_probs=42.7

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCCCE-----EEEE
Q ss_conf             17977898404201010213576215772788999999982588389984156677----------65674-----6754
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA----------DPPNV-----MTIH  254 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~----------~~~~~-----~~i~  254 (405)
                      |+||.+|||+|                |+-.|.++|+.|...||+|.+-++.....          .....     ++-.
T Consensus         2 L~gKvalITGa----------------s~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   65 (252)
T PRK12747          2 LKGKVALVTGA----------------SRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES   65 (252)
T ss_pred             CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             89599999484----------------77899999999998799999965998789999999999649957998336356


Q ss_pred             HHHHHHHHHHHHHCC-------CCCEEEEEHHHHHHH
Q ss_conf             657789999998505-------888799740444443
Q gi|254780622|r  255 VERAEDMLQEVLKAL-------PVDIAVMVSAVSDWR  284 (405)
Q Consensus       255 v~t~~em~~~~~~~~-------~~D~~I~aAAVSDf~  284 (405)
                      .+..+.+.+++.+.+       +.|++|.+|.+....
T Consensus        66 ~~~~~~~~~~~~~~~~~~~g~~~iDiLVnnAG~~~~~  102 (252)
T PRK12747         66 LHGVEALYSSLDNELQKRTGSTKFDILINNAGIGPGA  102 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
T ss_conf             7999999999999999842899810899899999998


No 149
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.62  E-value=0.012  Score=36.89  Aligned_cols=107  Identities=23%  Similarity=0.254  Sum_probs=62.3

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE-----EHHH
Q ss_conf             0179778984042010102135762157727889999999825883899841566------7765674675-----4657
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI-----HVER  257 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i-----~v~t  257 (405)
                      +|+||.+|||+|+                +=.|.++|++|...||.|.+..-...      ......+..+     +.+.
T Consensus         3 ~l~gK~alITG~s----------------~GIG~aia~~~a~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   66 (245)
T PRK12936          3 DLTGRKALVTGAS----------------GGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDE   66 (245)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCHHH
T ss_conf             8899989992747----------------689999999999869999998299999999999838966999913799999


Q ss_pred             HHHHHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH
Q ss_conf             7899999985058-887997404444432222101123345577510455218068988
Q gi|254780622|r  258 AEDMLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI  315 (405)
Q Consensus       258 ~~em~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~  315 (405)
                      .+.+.+++.+.+. .|++|.+|.+.-..+  .  .++.-.++.+.+.+.|...--+.+.
T Consensus        67 v~~~~~~~~~~~g~iDiLINnAG~~~~~~--~--~~~~~e~w~~~~~vNl~~~f~~~~~  121 (245)
T PRK12936         67 VKALGQKAEADLEGVDILVNNAGITKDGL--F--VRMSDEDWDAVLEVNLTAVFRLTRE  121 (245)
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCC--C--CCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999997599969998998899998--1--2099999999999981999999999


No 150
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.60  E-value=0.0053  Score=39.09  Aligned_cols=51  Identities=22%  Similarity=0.214  Sum_probs=30.0

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE-CCC
Q ss_conf             977898404201010213576215772788-----999999982588389984-156
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS-GPV  242 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~-g~~  242 (405)
                      |.=|-|+++.........+.-...+..|-|     ..+|.|+..+|-.|..|+ |.+
T Consensus       152 G~IVnisS~~~~~~~~~~~~~~~Y~asKaAv~~ltr~lA~Ela~~GIrVNaV~PG~i  208 (305)
T PRK08303        152 GLVVEVTDGTAEYNATHYRLSVFYDLAKTAVLRLAFSLAHELAPHGATAVALTPGWL  208 (305)
T ss_pred             CEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCC
T ss_conf             589998855552277887751989999999999999999997341919999963887


No 151
>PRK06194 hypothetical protein; Provisional
Probab=96.56  E-value=0.0089  Score=37.66  Aligned_cols=33  Identities=15%  Similarity=0.191  Sum_probs=19.5

Q ss_pred             CCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             888556999-9528478999999999999879889998
Q gi|254780622|r    2 DLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVIPV   38 (405)
Q Consensus         2 ~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~vv   38 (405)
                      +|+||.+++ |-+++|    ...+++.|-+.|+.|.++
T Consensus         3 ~l~gKvavITGassGI----G~a~A~~la~~Ga~Vvl~   36 (301)
T PRK06194          3 DFAGKVAVITGAASGF----GREFARIGARLGMKLVLA   36 (301)
T ss_pred             CCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEEEE
T ss_conf             9899989992737799----999999999879989999


No 152
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.55  E-value=0.013  Score=36.62  Aligned_cols=75  Identities=33%  Similarity=0.442  Sum_probs=49.3

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCC-CCCEEEE-----E
Q ss_conf             0179778984042010102135762157727889999999825883899841566--------776-5674675-----4
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IAD-PPNVMTI-----H  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~-~~~~~~i-----~  254 (405)
                      +|+||.+|||+|                |+-.|.++|+.+...||+|.+..-...        +.. ...+..+     .
T Consensus         7 ~L~gKvalVTGa----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~~~~~~~~Dvtd   70 (278)
T PRK08277          7 SLKGKVAVITGG----------------GGVLGGAMAKELARAGAKVAILDRNQEKAEAVVEEIKANGGEAIALKADVLD   70 (278)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             889998999586----------------7489999999999879989999798899999999998459909999824899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHH
Q ss_conf             657789999998505-8887997404
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSA  279 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAA  279 (405)
                      .++.+++.+++.+.+ ..|++|.+|.
T Consensus        71 ~~~v~~~~~~~~~~~G~iDiLVNnAG   96 (278)
T PRK08277         71 KESLEQARQQILKDFGRCDILINGAG   96 (278)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             99999999999998499888998898


No 153
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.50  E-value=0.012  Score=36.83  Aligned_cols=17  Identities=29%  Similarity=0.280  Sum_probs=8.9

Q ss_pred             HHHHHHHHCCCCEEEEE
Q ss_conf             99999982588389984
Q gi|254780622|r  223 AIAKSLAYFGAEVILIS  239 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~  239 (405)
                      .+|.++..+|-.|-.|+
T Consensus       180 ~lA~ela~~gIrVN~V~  196 (257)
T PRK12748        180 SLAPVLAEKGITVNAVN  196 (257)
T ss_pred             HHHHHHHHHCEEEEEEE
T ss_conf             99999723094999997


No 154
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.50  E-value=0.009  Score=37.61  Aligned_cols=158  Identities=15%  Similarity=0.174  Sum_probs=83.2

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEE-------EE
Q ss_conf             17977898404201010213576215772788999999982588389984156677--------6567467-------54
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMT-------IH  254 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~-------i~  254 (405)
                      |++|.+|||+|                |+-.|.++|+.|.+.|++|.+..++-...        .-.+.+.       -+
T Consensus         1 L~~KvalVTGg----------------s~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~   64 (246)
T PRK12938          1 MSQRIAYVTGG----------------MGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD   64 (246)
T ss_pred             CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             95098999185----------------86999999999998799899947998178999999998459978999678799


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHC--CCCCCEEEEEEC
Q ss_conf             657789999998505-88879974044444322221011233455775104552180689887621--489958999811
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHH--QCRPSIVVGFAA  331 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~--k~~~~~lVGFka  331 (405)
                      -++.+++.+.+.+.+ ..|++|..|.+....+  .  .++...+....+.+.|.-.--+.+.+.++  +.....+|-+.-
T Consensus        65 ~~~~~~~~~~i~~~~g~idiLVNNAG~~~~~~--~--~~~~~~~w~~~~~vNl~~~f~~~~~~~~~m~~~~~G~IVnisS  140 (246)
T PRK12938         65 WDSTKAAFDKVKAEVGEIDVLVNNAGITRDVV--F--RKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS  140 (246)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC--H--HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf             99999999999997599989998988899988--0--3499999999999985639999999998610328818999833


Q ss_pred             CC---C--HHHHHH----------HHHHHHCCCCEEEEECCCCCCCCCCCCCE
Q ss_conf             41---2--389999----------99999749989999205776777776611
Q gi|254780622|r  332 ET---Q--CIEQNA----------REKLLNKGADFIVSNCILPDTGFVGKEWN  369 (405)
Q Consensus       332 ET---~--~l~~~A----------~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n  369 (405)
                      -.   .  ....++          +.--.+-+-+=|-.|.|.++  ++.++..
T Consensus       141 ~~~~~~~~~~~~Y~asKaal~~ltk~lA~Ela~~gIrVN~VaPG--~i~T~~~  191 (246)
T PRK12938        141 VNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG--YIGTDMV  191 (246)
T ss_pred             HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC--CCCCCCH
T ss_conf             66466888863779999999999999999960439899999668--7987030


No 155
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.50  E-value=0.012  Score=36.81  Aligned_cols=78  Identities=24%  Similarity=0.346  Sum_probs=49.8

Q ss_pred             CEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCC--CC-----CEEEEEHHH
Q ss_conf             778984042010102135762157727889999999825883899841566--------776--56-----746754657
Q gi|254780622|r  193 KRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IAD--PP-----NVMTIHVER  257 (405)
Q Consensus       193 k~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~--~~-----~~~~i~v~t  257 (405)
                      |++|||+|               ||| .|.++|+++..+|++|.++.-...        +..  ..     ..++-+.+.
T Consensus         1 K~alITGa---------------ssG-IG~a~A~~la~~Ga~v~l~~r~~~~l~~~~~~l~~~g~~~~~~~~~Dvsd~~~   64 (272)
T PRK07832          1 KRCFVTGA---------------ASG-IGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDA   64 (272)
T ss_pred             CEEEEECC---------------CHH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
T ss_conf             97999472---------------019-99999999998899899998988999999999984589714788566899999


Q ss_pred             HHHHHHHHHHCC-CCCEEEEEHHHHHHHHH
Q ss_conf             789999998505-88879974044444322
Q gi|254780622|r  258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRFP  286 (405)
Q Consensus       258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~~  286 (405)
                      .+++.+.+.+.+ +.|++|.+|.++.+.+-
T Consensus        65 v~~~~~~~~~~~g~iDiLiNNAGi~~~g~~   94 (272)
T PRK07832         65 VAAFAADIHAAHPSMDVVMNIAGISAWGTV   94 (272)
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCCC
T ss_conf             999999999972998889987876888873


No 156
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.49  E-value=0.013  Score=36.55  Aligned_cols=21  Identities=38%  Similarity=0.260  Sum_probs=10.5

Q ss_pred             HHHHHHHHHHHHCCCCEEEEE
Q ss_conf             788999999982588389984
Q gi|254780622|r  219 QQGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       219 k~G~~iA~~~~~~Ga~V~li~  239 (405)
                      =.|.++|+.+...|++|.+..
T Consensus        21 GIG~aiA~~la~~G~~V~l~~   41 (275)
T PRK07775         21 GIGAATAIELAAHGFPVALGA   41 (275)
T ss_pred             HHHHHHHHHHHHCCCEEEEEE
T ss_conf             999999999998799899998


No 157
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=96.45  E-value=0.024  Score=34.88  Aligned_cols=30  Identities=20%  Similarity=0.224  Sum_probs=17.1

Q ss_pred             CEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             5699-995284789999999999998798899985
Q gi|254780622|r    6 KKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus         6 k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~   39 (405)
                      |||| .|.+|=|    .-.|++.|.+.|.++.++.
T Consensus         2 KkILVTGg~GFI----Gs~Lv~~Ll~~~~~~v~~~   32 (355)
T PRK10217          2 RKILITGGAGFI----GSALVRYIINETSDAVVVV   32 (355)
T ss_pred             CEEEECCCCCHH----HHHHHHHHHHCCCCEEEEE
T ss_conf             969993787579----9999999997699889998


No 158
>PRK06182 short chain dehydrogenase; Validated
Probab=96.45  E-value=0.014  Score=36.40  Aligned_cols=48  Identities=23%  Similarity=0.187  Sum_probs=28.9

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE-CCC
Q ss_conf             977898404201010213576215772788-----999999982588389984-156
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS-GPV  242 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~-g~~  242 (405)
                      |.=|-|+|-+.+.+.   -+.+-.++-|-|     ..||.|+...|-.|+.|+ |++
T Consensus       126 G~IvnisS~ag~~~~---p~~~~Y~asK~av~~~t~~La~El~~~gI~V~~v~PG~v  179 (273)
T PRK06182        126 GRIINITSMGGKIYT---PLGAWYHATKFALEGLSDALRLEVAPFGIDVVVIEPGGI  179 (273)
T ss_pred             CEEEEECCHHHCCCC---CCCCHHHHHHHHHHHHHHHHHHHHCHHCCEEEEEECCCC
T ss_conf             589998684440779---997579999999999999999984403878999973898


No 159
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.42  E-value=0.018  Score=35.67  Aligned_cols=83  Identities=23%  Similarity=0.205  Sum_probs=43.1

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC-CCC-----------------CCCCE
Q ss_conf             017977898404201010213576215772788999999982588389984156-677-----------------65674
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV-SIA-----------------DPPNV  250 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~-~~~-----------------~~~~~  250 (405)
                      .|+||.+|||+|...              +=.|.++|+.|...||+|.+.+-.. +..                 ...+.
T Consensus         3 ~L~gKvalVTGas~~--------------~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   68 (257)
T PRK12859          3 QLKNKVAVVTGVSRL--------------DGIGAAICKELAEAGYDIFFTYWTAYDKEMPWGVDQSEQIQLQEELLKNGV   68 (257)
T ss_pred             CCCCCEEEEECCCCC--------------CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf             889888999288999--------------862999999999879989998365201112345375799999999995498


Q ss_pred             E--EE-----EHHHHHHHHHHHHHCCC-CCEEEEEHHHHHHHH
Q ss_conf             6--75-----46577899999985058-887997404444432
Q gi|254780622|r  251 M--TI-----HVERAEDMLQEVLKALP-VDIAVMVSAVSDWRF  285 (405)
Q Consensus       251 ~--~i-----~v~t~~em~~~~~~~~~-~D~~I~aAAVSDf~~  285 (405)
                      +  .+     +-+..+.+.+++.+.+. .|++|.+|+.....+
T Consensus        69 ~~~~~~~Dl~~~~~~~~~i~~~~~~~g~iDilVnnAg~~~~~~  111 (257)
T PRK12859         69 KVSSMELDLTQNDAPKELINKVTEQLGYPHILINNAAYSTNND  111 (257)
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf             5999983589999999999999998299989998999999999


No 160
>PRK06720 hypothetical protein; Provisional
Probab=96.41  E-value=0.016  Score=36.06  Aligned_cols=83  Identities=23%  Similarity=0.219  Sum_probs=54.8

Q ss_pred             CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEEEE---
Q ss_conf             3200179778984042010102135762157727889999999825883899841566--------77-65674675---
Q gi|254780622|r  186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVMTI---  253 (405)
Q Consensus       186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~~i---  253 (405)
                      .+.+|+||.++||+|+                +=.|.++|+.+.+.||+|.+..-...        +. ....+..+   
T Consensus        10 M~~~L~gKvalITGa~----------------~GIG~a~A~~la~~Ga~Vvi~d~~~~~~~~~~~~i~~~g~~a~~~~~D   73 (169)
T PRK06720         10 MKMKLAGKVAIVTGGG----------------IGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYD   73 (169)
T ss_pred             CCCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             8686299999998975----------------489999999999869989995276365999999999749953789758


Q ss_pred             --EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHH
Q ss_conf             --4657789999998505-888799740444443
Q gi|254780622|r  254 --HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWR  284 (405)
Q Consensus       254 --~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~  284 (405)
                        .-+..+++.+++.+.+ +.|++|-.|.+..+.
T Consensus        74 vs~~~~v~~~i~~~~~~~g~iDiLvNNAGI~~~~  107 (169)
T PRK06720         74 MEKQGDWQRVISITLNAFSRIDMLFQNAGLYKID  107 (169)
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf             8999999999999999759899899894217887


No 161
>PRK05855 short chain dehydrogenase; Validated
Probab=96.41  E-value=0.037  Score=33.69  Aligned_cols=168  Identities=21%  Similarity=0.162  Sum_probs=87.7

Q ss_pred             CHHHHHHHHCCCC---CCHHHHHHHH---CCCCCEE-EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
Q ss_conf             1888988520245---5214666752---2799689-8405660000038899999998640001346521255310322
Q gi|254780622|r   91 SANFIAHVAHGMV---YDLASAILLA---KGDQPVL-IAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGY  163 (405)
Q Consensus        91 TaNtiaK~A~Gia---D~llt~~~la---~~~~pi~-iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~  163 (405)
                      +.+..+-.++|+.   .|++....--   ..+.||- |+|.  ..-|-.|...+.++.--..  ...-+..     .|  
T Consensus       202 ~~~~~~d~~~g~~lYRAN~~~~~~~pr~r~~~vPVq~iv~~--~D~~v~p~l~~~~~~w~~~--l~rr~i~-----a~--  270 (582)
T PRK05855        202 SPTQASDGAHGVKLYRANFIRSLLAPRERYTHVPVQLIVPT--GDPYVRPALYDDLARWVPR--LWRREIK-----AG--  270 (582)
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC--CCCCCCHHHHCCHHHCCCC--CEEEEEC-----CC--
T ss_conf             83135677733654114576434788887788877997517--8877697774414441786--0898603-----78--


Q ss_pred             CCCCCCCHHHHHHHHHHHHHCC----------------CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHH
Q ss_conf             3334345589999999863101----------------320017977898404201010213576215772788999999
Q gi|254780622|r  164 GVGRMSEPCDIIRQITWLLYKS----------------KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKS  227 (405)
Q Consensus       164 G~grl~e~~~I~~~~~~~~~~~----------------~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~  227 (405)
                      -.-=+.+|+.|...+..+....                ....++||.+|||++               ||| .|.++|.+
T Consensus       271 HW~p~s~P~~iA~~~~efv~~~~~~~~~~~~~~~~~~~~~~rFsGKvAvVTGA---------------~sG-IGrA~A~~  334 (582)
T PRK05855        271 HWLPMSHPQVLAAAVAELIDAVEGGPPPRALLRARVGRPRGRFGGKLVVVTGA---------------GSG-IGRATALA  334 (582)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECC---------------CCH-HHHHHHHH
T ss_conf             53766798999999999998635788986673354589988749958999587---------------578-99999999


Q ss_pred             HHHCCCCEEEEECCCC-C-----C-CCCC--EE--EEEHHHH---HHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             9825883899841566-7-----7-6567--46--7546577---89999998505-8887997404444432
Q gi|254780622|r  228 LAYFGAEVILISGPVS-I-----A-DPPN--VM--TIHVERA---EDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       228 ~~~~Ga~V~li~g~~~-~-----~-~~~~--~~--~i~v~t~---~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      |..+||+|.+..=... +     . .-.+  ..  ...|...   +.+.+.+.+.+ ..|++|-+|.|+-+.+
T Consensus       335 fA~~GA~Vvl~Dr~~~~l~eta~ei~~~G~~a~~~~~DVtd~~av~al~~~v~~~~G~iDILVNNAGI~~~g~  407 (582)
T PRK05855        335 FAREGAEVVASDIDEAAAERTAALIRAAGAVAHAYRVDVSDADAMEALAEWVGAEHGVPDIVVNNAGIGMAGG  407 (582)
T ss_pred             HHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf             9977999999607999999999999951984899975589999999999999997699999998987589978


No 162
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.39  E-value=0.029  Score=34.39  Aligned_cols=32  Identities=28%  Similarity=0.420  Sum_probs=18.0

Q ss_pred             CCCCCCEEEE-EEE--CHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             9888556999-952--84789999999999998798899
Q gi|254780622|r    1 MDLSGKKIAL-IMC--GSVAVYKSLDLIRRLRERGAVVI   36 (405)
Q Consensus         1 m~l~~k~Ill-gvt--Gsiaa~k~~~l~~~L~~~g~~V~   36 (405)
                      |+|+||..++ |..  -||.    ..+++.|.++|++|-
T Consensus         4 l~L~GKvAlVTGaGgs~GIG----~aiA~~lA~~GA~Vv   38 (298)
T PRK06300          4 IDLTGKVAFIAGIGDDQGYG----WGIAKMLAEAGATII   38 (298)
T ss_pred             CCCCCCEEEEECCCCCCHHH----HHHHHHHHHCCCEEE
T ss_conf             89999979990879986299----999999998299999


No 163
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.38  E-value=0.017  Score=35.89  Aligned_cols=45  Identities=20%  Similarity=0.197  Sum_probs=26.8

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE
Q ss_conf             977898404201010213576215772788-----999999982588389984
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~  239 (405)
                      |+=|-|+|.....   +-...++++.-|-|     ..+|.++..+|-.|-.|+
T Consensus       145 G~IInisS~ag~~---g~~g~~~Y~AsKagv~~lTrslA~Ela~~gIRVNaIa  194 (303)
T PRK07792        145 GRIVNTSSEAGLV---GPVGQANYGAAKAGITALTLSAARALGRYGVRANAIC  194 (303)
T ss_pred             EEEEEECCHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
T ss_conf             4999974476566---8998588999999999999999999855196999989


No 164
>PRK09135 pteridine reductase; Provisional
Probab=96.38  E-value=0.017  Score=35.86  Aligned_cols=81  Identities=21%  Similarity=0.190  Sum_probs=52.0

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----------CCCCCEEEE----
Q ss_conf             01797789840420101021357621577278899999998258838998415667-----------765674675----
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----------ADPPNVMTI----  253 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----------~~~~~~~~i----  253 (405)
                      .+.||.+|||+|.                +-.|.++|+.|...||+|.+.......           ..+..+..+    
T Consensus         3 ~~sgKvalVTGas----------------~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv   66 (249)
T PRK09135          3 TDSSKVALITGGA----------------RRIGAAIARTLHAAGYRVAVHYHRSAAEADALAAELNRLRPGSAAALQADL   66 (249)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             8999889996887----------------589999999999879989998189879999999999850598189998169


Q ss_pred             -EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             -4657789999998505-8887997404444432
Q gi|254780622|r  254 -HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       254 -~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                       .-+..+++.+++.+.+ ..|++|.+|.+....+
T Consensus        67 ~~~~~v~~~~~~~~~~~G~iDiLVNNAg~~~~~~  100 (249)
T PRK09135         67 LDPDALEQLVAAAVAAFGRLDALVNNASSFYPTP  100 (249)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf             9999999999999998399989998998899998


No 165
>PRK07985 oxidoreductase; Provisional
Probab=96.37  E-value=0.017  Score=35.92  Aligned_cols=78  Identities=31%  Similarity=0.333  Sum_probs=53.9

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-----------CCCCEEEE---
Q ss_conf             0017977898404201010213576215772788999999982588389984156677-----------65674675---
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-----------DPPNVMTI---  253 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-----------~~~~~~~i---  253 (405)
                      ..|+||.+|||+|                |+-.|.++|+.|...||+|.+-+-..+..           .-.....+   
T Consensus        45 GrL~gKvalVTGa----------------s~GIG~aiA~~lA~~GA~Vvi~~~~~~~~~a~~~~~~~~~~g~~~~~~~~D  108 (294)
T PRK07985         45 GRLKDRKALVTGG----------------DSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGD  108 (294)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             7789997999172----------------669999999999987999999429966678999999999729958999767


Q ss_pred             --EHHHHHHHHHHHHHCCC-CCEEEEEHHHH
Q ss_conf             --46577899999985058-88799740444
Q gi|254780622|r  254 --HVERAEDMLQEVLKALP-VDIAVMVSAVS  281 (405)
Q Consensus       254 --~v~t~~em~~~~~~~~~-~D~~I~aAAVS  281 (405)
                        .-+..++|.+++.+.+. .|++|..|...
T Consensus       109 vs~~~~v~~lv~~~~~~fG~iDiLVnnAG~~  139 (294)
T PRK07985        109 LSDEKFARSLVHEAHKALGGLDIMALVAGKQ  139 (294)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             8999999999999999859988899806666


No 166
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.34  E-value=0.017  Score=35.89  Aligned_cols=79  Identities=16%  Similarity=0.267  Sum_probs=50.5

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCE--EEE--EH---
Q ss_conf             9778984042010102135762157727889999999825883899841566--------77-65674--675--46---
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNV--MTI--HV---  255 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~--~~i--~v---  255 (405)
                      .|+||||++                |+=.|.++|+++..+|++|.++.-...        +. ..++.  ..+  ++   
T Consensus         2 ~K~vlITGA----------------ssGIG~alA~~la~~G~~v~l~~r~~~~l~~~~~el~~~~~~~~v~~~~~Dvsd~   65 (248)
T PRK08251          2 RQKILITGA----------------SSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH   65 (248)
T ss_pred             CCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCH
T ss_conf             998999478----------------6399999999999879989999898889999999998737997399997867868


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHH
Q ss_conf             57789999998505-88879974044444322
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFP  286 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~  286 (405)
                      ++.+++.+.+.+.+ ..|++|.+|.+.++.+.
T Consensus        66 ~~v~~~~~~~~~~~g~iD~lvnNAGi~~~~~~   97 (248)
T PRK08251         66 DQVFEVFAEFSDELGGLDRVIVNAGIGKGARL   97 (248)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf             99999999999980999899985765788665


No 167
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.29  E-value=0.018  Score=35.64  Aligned_cols=78  Identities=24%  Similarity=0.401  Sum_probs=46.9

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEE-----EEEHHH
Q ss_conf             9778984042010102135762157727889999999825883899841566--------77-656746-----754657
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVM-----TIHVER  257 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~-----~i~v~t  257 (405)
                      ||.+|||+|.               || .|.++|+.+...||+|.+..-...        +. ....+.     +-+-+.
T Consensus         1 GKv~lITGas---------------sG-IG~a~A~~la~~Ga~vvl~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~   64 (263)
T PRK06181          1 GKVVIITGAS---------------EG-IGRALAVRLARAGARLVLAARNEERLASLAQELANYGAEALVVATDVSDAEA   64 (263)
T ss_pred             CCEEEEECCC---------------CH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
T ss_conf             9999995810---------------19-9999999999879989999889999999999999549967999807999999


Q ss_pred             HHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             789999998505-8887997404444432
Q gi|254780622|r  258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      .+++.+.+.+.+ ..|++|.+|.++.+.+
T Consensus        65 ~~~~~~~~~~~~G~iDiLVNNAGi~~~~~   93 (263)
T PRK06181         65 CERLIEAAVAHFGGIDILVNNAGMTMWSR   93 (263)
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             99999999998299648998785678887


No 168
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.23  E-value=0.023  Score=34.97  Aligned_cols=158  Identities=15%  Similarity=0.105  Sum_probs=82.5

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--------CCCCCEEE-------EE
Q ss_conf             1797789840420101021357621577278899999998258838998415667--------76567467-------54
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--------ADPPNVMT-------IH  254 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--------~~~~~~~~-------i~  254 (405)
                      +.+|-+|||+|.                +-.|.++|+.+...|++|.+.......        -...+.+.       -+
T Consensus         1 m~nKvalITGas----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~   64 (249)
T PRK06123          1 MMRKVMIITGAS----------------RGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVAD   64 (249)
T ss_pred             CCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             999889996868----------------7999999999998799899980898789999999999649909999847999


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH----HHHHHHHHCC-CCCCEEEE
Q ss_conf             657789999998505-88879974044444322221011233455775104552180----6898876214-89958999
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP----DILKIIGHHQ-CRPSIVVG  328 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p----dIL~~i~~~k-~~~~~lVG  328 (405)
                      -++.+.|.+.+.+.+ ..|++|..|++.....+ .  .++.-+.+.+.+.+.|.-.-    -.+..+.+++ .....+|.
T Consensus        65 ~~~v~~~~~~~~~~~G~iDiLVnNAG~~~~~~~-~--~~~~~~~w~~~~~vNl~~~~~~~~~~~~~m~~~~~g~~g~IIn  141 (249)
T PRK06123         65 EADVLRLFEAVDRELGRLDALVNNAGILEAQMR-L--EQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVN  141 (249)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC-H--HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             999999999999982998789988855789997-2--1299999999985406999999999999999970899837999


Q ss_pred             EEC---CC---CHHHHHHHHH-----H-----HHCCCCEEEEECCCCCCCCCCCCC
Q ss_conf             811---41---2389999999-----9-----974998999920577677777661
Q gi|254780622|r  329 FAA---ET---QCIEQNAREK-----L-----LNKGADFIVSNCILPDTGFVGKEW  368 (405)
Q Consensus       329 Fka---ET---~~l~~~A~~K-----l-----~~K~~D~IVAN~i~~~~~~fgsd~  368 (405)
                      ..-   ..   .+...++-.|     |     .+-+-+=|-.|.|.++  ++.++.
T Consensus       142 isS~~~~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrvN~IaPG--~i~T~~  195 (249)
T PRK06123        142 VSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPG--VIYTEI  195 (249)
T ss_pred             ECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC--CCCCCC
T ss_conf             744765658983068789999999999999999986559699999867--897743


No 169
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.18  E-value=0.023  Score=34.95  Aligned_cols=79  Identities=24%  Similarity=0.316  Sum_probs=52.8

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE-CCCC---CCCCCCEEEEEHHHHHHHHH
Q ss_conf             0017977898404201010213576215772788999999982588389984-1566---77656746754657789999
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS-GPVS---IADPPNVMTIHVERAEDMLQ  263 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~-g~~~---~~~~~~~~~i~v~t~~em~~  263 (405)
                      ..++||+|.||+.                ||-.|.||.+.++.+||+|+-++ ++.+   .......+.+.-+-.+|  .
T Consensus        13 ~~~kgKtIgITGA----------------sGaLG~AL~k~f~~~GakVIalTh~~~~~~~~~~~~p~~wi~W~cG~E--~   74 (250)
T PRK12367         13 SRWNGKRIGITGA----------------SGALGKALTKLFRAKGAKVIGLTHSKINNSEISDESPNEWVSWECGKE--S   74 (250)
T ss_pred             CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCH--H
T ss_conf             5638987999678----------------738999999999988998999836888875455678952898434998--9


Q ss_pred             HHHHCC-CCCEEEEEHHHHHHH
Q ss_conf             998505-888799740444443
Q gi|254780622|r  264 EVLKAL-PVDIAVMVSAVSDWR  284 (405)
Q Consensus       264 ~~~~~~-~~D~~I~aAAVSDf~  284 (405)
                      .+.+.+ +.|++|...-+-++.
T Consensus        75 ~L~~~LkkiDILILNHGIn~~~   96 (250)
T PRK12367         75 SLDKTLAKIDVLILNHGINPGG   96 (250)
T ss_pred             HHHHHHHHCCEEEECCCCCCCC
T ss_conf             9999987588999838777455


No 170
>PRK06483 short chain dehydrogenase; Provisional
Probab=96.17  E-value=0.019  Score=35.48  Aligned_cols=75  Identities=17%  Similarity=0.125  Sum_probs=47.4

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--CC--CCCCEEEEE-----HHHHHHHH
Q ss_conf             9778984042010102135762157727889999999825883899841566--77--656746754-----65778999
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--IA--DPPNVMTIH-----VERAEDML  262 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--~~--~~~~~~~i~-----v~t~~em~  262 (405)
                      .|.||||+|                |+-.|.++|+.|...|++|.+..-...  ..  ...+...+.     -...+++.
T Consensus         2 ~ktVlVTGa----------------s~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~l~~~~~~~~~~Dv~~~~~v~~~~   65 (236)
T PRK06483          2 SAPILITGA----------------GQRIGLALAKHLLAQGQPVIVSYRSHYPAIDELRQAGATCIQADFSTNAGIMAFI   65 (236)
T ss_pred             CCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHH
T ss_conf             987999789----------------9889999999999889989999598479999998569989992279999999999


Q ss_pred             HHHHHCC-CCCEEEEEHHHHH
Q ss_conf             9998505-8887997404444
Q gi|254780622|r  263 QEVLKAL-PVDIAVMVSAVSD  282 (405)
Q Consensus       263 ~~~~~~~-~~D~~I~aAAVSD  282 (405)
                      +.+.+.. ..|++|.+|....
T Consensus        66 ~~~~~~~g~id~lVnNAg~~~   86 (236)
T PRK06483         66 DELKQHTDGLRAIIHNASDWL   86 (236)
T ss_pred             HHHHHHHCCCCEEEECCCCCC
T ss_conf             999998399759997774467


No 171
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.11  E-value=0.026  Score=34.67  Aligned_cols=185  Identities=23%  Similarity=0.302  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC-----C
Q ss_conf             99999998631013200179778984042010102135762157727889999999825883899841566-77-----6
Q gi|254780622|r  173 DIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA-----D  246 (405)
Q Consensus       173 ~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~-----~  246 (405)
                      .+++.+...     ...|+||.|.||+                .||-.|.++++++.+.||+|..++...+ +.     .
T Consensus       166 tlvDklmGT-----alSLKGKTV~VTG----------------ASG~LG~aL~k~l~~~GAKVIalTs~~~~i~~~~~~~  224 (410)
T PRK07424        166 TLVDKLMGT-----ALSLKGKTVAVTG----------------ASGTLGQALLKELHQQGAKVIALTSNSDKIPLEINGE  224 (410)
T ss_pred             HHHHHHHCC-----EEECCCCEEEEEC----------------CCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
T ss_conf             025555210-----1301686799954----------------7737789999999977998999935898655344665


Q ss_pred             CCCEEEEEHHHHHH-HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH----HHH--HC
Q ss_conf             56746754657789-999998505888799740444443222210112334557751045521806898----876--21
Q gi|254780622|r  247 PPNVMTIHVERAED-MLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK----IIG--HH  319 (405)
Q Consensus       247 ~~~~~~i~v~t~~e-m~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~----~i~--~~  319 (405)
                      ...++.+.-+-.+| .++..++  +.|++|...-|..+.-..  ...+.+     .+.+..-..-++++    .+.  +.
T Consensus       225 ~~~~~~i~W~~G~E~~L~~~L~--kiDILILNHGIN~~g~~~--~~~i~~-----S~EINalS~~rll~lF~~~~~~~~~  295 (410)
T PRK07424        225 DLPVKTIHWQVGQEAALAELLE--KVDILVINHGINVHGERT--PEAINK-----SYEVNTFSAWRLMELFLTTVKTNQD  295 (410)
T ss_pred             CCCCEEEEEECCCHHHHHHHHH--HCCEEEECCCCCCCCCCC--HHHHHH-----HHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             4671278643288889888886--468998848878566659--789887-----6747877799999999999604644


Q ss_pred             CCCCCEEE-EEECCCC----HHHH---HHHHH---HHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHH
Q ss_conf             48995899-9811412----3899---99999---997499899992057767777766118999836985972789989
Q gi|254780622|r  320 QCRPSIVV-GFAAETQ----CIEQ---NAREK---LLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKA  388 (405)
Q Consensus       320 k~~~~~lV-GFkaET~----~l~~---~A~~K---l~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~  388 (405)
                      +.+..+-| .=-||-.    -+.|   ++.-.   +++-...++|.-.+   -++|-|+-|           .++.||-.
T Consensus       296 ~~~kEIWvNTSEAEI~PA~sP~YEiSKrliGqLVSlrrl~~~~~IRKlI---LGPFkS~LN-----------PiGiMSa~  361 (410)
T PRK07424        296 KATKEVWVNTSEAEVSPAFSPLYELSKRALGDLVTLRRLDAPCVIRKLI---LGPFKSQLN-----------PYGVMSAD  361 (410)
T ss_pred             CCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE---CCCCCCCCC-----------CCCCCCHH
T ss_conf             5774389965343205554828898999977658676337882688763---055444688-----------76202889


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999999999998
Q gi|254780622|r  389 EVADRLCHLIVEH  401 (405)
Q Consensus       389 ~iA~~Il~~i~~~  401 (405)
                      .+|++|++.....
T Consensus       362 ~VAk~I~~~ak~~  374 (410)
T PRK07424        362 WVAKQIVKLAKRD  374 (410)
T ss_pred             HHHHHHHHHHHCC
T ss_conf             9999999998558


No 172
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.09  E-value=0.032  Score=34.10  Aligned_cols=50  Identities=34%  Similarity=0.337  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             9999998631013200179778984042010102135762157727889999999825883899841
Q gi|254780622|r  174 IIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       174 I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      .+..+.+.+. ....+|+|++++|++|                ||-.|.+.|..+.+.|++|+|+.-
T Consensus        11 ~Va~vekal~-~~g~dl~g~~~~V~G~----------------tG~vG~~~A~~lA~~Ga~v~lv~R   60 (194)
T cd01078          11 AVAAAGKALE-LMGKDLKGKTAVVLGG----------------TGPVGQRAAVLLAREGARVVLVGR   60 (194)
T ss_pred             HHHHHHHHHH-HHCCCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             9999999999-8299867988999858----------------857899999999983997999958


No 173
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.09  E-value=0.029  Score=34.36  Aligned_cols=22  Identities=32%  Similarity=0.413  Sum_probs=10.5

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             7278899999998258838998
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li  238 (405)
                      |+-+|.++|+.|...||+|.+.
T Consensus         9 s~GIG~aiA~~la~~Ga~V~i~   30 (259)
T PRK08340          9 SRGIGFNVARELLKKGARVVIS   30 (259)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEE
T ss_conf             7789999999999879999999


No 174
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=96.08  E-value=0.041  Score=33.37  Aligned_cols=19  Identities=5%  Similarity=0.095  Sum_probs=12.5

Q ss_pred             HHHHHHHHHHCCCEEEEEE
Q ss_conf             9999999998798899985
Q gi|254780622|r   21 SLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus        21 ~~~l~~~L~~~g~~V~vv~   39 (405)
                      .-.|++.|.++|.++.+.+
T Consensus        13 Gs~l~~~Ll~~~~~~v~~v   31 (352)
T PRK10084         13 GSAVVRHIINNTQDSVVNV   31 (352)
T ss_pred             HHHHHHHHHHCCCCEEEEE
T ss_conf             9999999997799889998


No 175
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.04  E-value=0.029  Score=34.32  Aligned_cols=78  Identities=18%  Similarity=0.121  Sum_probs=45.6

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------C--CC-CCCEEEE-----EH
Q ss_conf             9778984042010102135762157727889999999825883899841566--------7--76-5674675-----46
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------I--AD-PPNVMTI-----HV  255 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~--~~-~~~~~~i-----~v  255 (405)
                      +|.+|||+|.                +-.|.++|+.|...|++|.+..-...        +  .. ...+..+     .-
T Consensus         2 nKvalITG~s----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~   65 (259)
T PRK12384          2 NKVAVVIGGG----------------QTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE   65 (259)
T ss_pred             CCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCH
T ss_conf             9789994688----------------689999999999879999999798899999999998624886089998327999


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             57789999998505-8887997404444432
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      ++.+++.+++.+.+ ..|++|.+|.++...+
T Consensus        66 ~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~   96 (259)
T PRK12384         66 QSVLALSRGVDEIFGRVDLLVYSAGIAKAAK   96 (259)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             9999999999998299719998997778899


No 176
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=96.04  E-value=0.027  Score=34.54  Aligned_cols=77  Identities=25%  Similarity=0.310  Sum_probs=48.7

Q ss_pred             EEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCC-EEEEEC-CCCCC---------CC--CCEEEE--EH---
Q ss_conf             78984042010102135762157727889999999825883-899841-56677---------65--674675--46---
Q gi|254780622|r  194 RALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAE-VILISG-PVSIA---------DP--PNVMTI--HV---  255 (405)
Q Consensus       194 ~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~-V~li~g-~~~~~---------~~--~~~~~i--~v---  255 (405)
                      .+|||+|                ||-+|.++|+.+..+|+. |.++.- +.+..         ..  ..+..+  .+   
T Consensus         2 tvlVTGa----------------s~GIG~~~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~~~~~g~~v~~~~~Dv~~~   65 (180)
T smart00822        2 TYLITGG----------------LGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADR   65 (180)
T ss_pred             EEEEECC----------------CCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCH
T ss_conf             9999787----------------879999999999987998899986898781889999999995699699998026886


Q ss_pred             HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHH
Q ss_conf             57789999998505-88879974044444322
Q gi|254780622|r  256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFP  286 (405)
Q Consensus       256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~  286 (405)
                      +..+++.+.+.+.+ +.|++|++|.+.++.+-
T Consensus        66 ~~~~~~v~~~~~~~g~id~lvn~AG~~~~~~~   97 (180)
T smart00822       66 AALAAALAAIPARLGPLRGVIHAAGVLDDGLL   97 (180)
T ss_pred             HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCH
T ss_conf             77666777679973983799942466699772


No 177
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.03  E-value=0.032  Score=34.04  Aligned_cols=45  Identities=20%  Similarity=0.209  Sum_probs=28.7

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE
Q ss_conf             977898404201010213576215772788-----999999982588389984
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~  239 (405)
                      |+=|.|+|-...-   +..+.+-.++-|-+     .+|+.|+...|-.|++|.
T Consensus       133 G~IvnisS~~g~~---~~p~~~~Y~aSK~Al~~~t~sL~~El~~~gI~V~~V~  182 (280)
T PRK06914        133 GKIINISSISGQV---GFPALSPYVSSKYALEGWSESLRLEVKPFGIDVALIE  182 (280)
T ss_pred             CEEEEECCHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             5899983413326---8998737999999999999999998431093899997


No 178
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.98  E-value=0.053  Score=32.68  Aligned_cols=35  Identities=26%  Similarity=0.271  Sum_probs=20.7

Q ss_pred             CCCCEEEE-EEECHHHHHHHHHHHHHHHHCC-CEEEEEECH
Q ss_conf             88556999-9528478999999999999879-889998585
Q gi|254780622|r    3 LSGKKIAL-IMCGSVAVYKSLDLIRRLRERG-AVVIPVMTK   41 (405)
Q Consensus         3 l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g-~~V~vv~T~   41 (405)
                      |+||+||+ |-+|+|-    -+|++.|.+.+ ...-++.+.
T Consensus         2 ~~~K~ILVTGGaGfIG----S~lv~~Ll~~~~~~~iii~~~   38 (324)
T TIGR03589         2 FNNKSILITGGTGSFG----KAFISRLLENYNPKKIIIYSR   38 (324)
T ss_pred             CCCCEEEEECCCCHHH----HHHHHHHHHCCCCCEEEEECC
T ss_conf             9939999907977999----999999997299828999668


No 179
>pfam00106 adh_short short chain dehydrogenase. This family contains a wide variety of dehydrogenases.
Probab=95.89  E-value=0.039  Score=33.53  Aligned_cols=69  Identities=28%  Similarity=0.239  Sum_probs=43.6

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCCCC------------CCCCEEEE--EH---HHHHHHHHHHHHCC-CCCEEEEEH
Q ss_conf             72788999999982588389984156677------------65674675--46---57789999998505-888799740
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILISGPVSIA------------DPPNVMTI--HV---ERAEDMLQEVLKAL-PVDIAVMVS  278 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~------------~~~~~~~i--~v---~t~~em~~~~~~~~-~~D~~I~aA  278 (405)
                      |+-.|.++|+.+...|++|.++.+.....            ....+..+  .+   +..+++.+.+.+.. +.|++|.+|
T Consensus         9 s~GIG~aia~~la~~Ga~~vv~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~linnA   88 (167)
T pfam00106         9 TGGLGLALARWLAAEGARHLVLVSRRGDAPGAAELVAELEALGAEVTVAACDVADRDALAALLAALPAALGPLDGVVHNA   88 (167)
T ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             87899999999998799489996599676899999999995598599998469999999999999999759973999887


Q ss_pred             HHHHHHH
Q ss_conf             4444432
Q gi|254780622|r  279 AVSDWRF  285 (405)
Q Consensus       279 AVSDf~~  285 (405)
                      .+.+..+
T Consensus        89 G~~~~~~   95 (167)
T pfam00106        89 GVLDDGP   95 (167)
T ss_pred             CCCCCCC
T ss_conf             1268986


No 180
>PRK06484 short chain dehydrogenase; Validated
Probab=95.88  E-value=0.056  Score=32.51  Aligned_cols=34  Identities=12%  Similarity=0.208  Sum_probs=19.3

Q ss_pred             CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             8556999952847899999999999987988999858
Q gi|254780622|r    4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus         4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      +||.+  .|||+-.-+ -..+++.|.++|+.|.+.-.
T Consensus         4 eGKva--lVTGas~GI-G~aiA~~la~~Ga~V~~~dr   37 (530)
T PRK06484          4 QARVV--LVTGAAGGI-GRACCQRFARAGDRVVMADR   37 (530)
T ss_pred             CCCEE--EEECCCCHH-HHHHHHHHHHCCCEEEEEEC
T ss_conf             99899--997836689-99999999987999999968


No 181
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.85  E-value=0.044  Score=33.20  Aligned_cols=77  Identities=21%  Similarity=0.094  Sum_probs=50.3

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC----------CCCCCEEEE--E--
Q ss_conf             01797789840420101021357621577278899999998258838998415667----------765674675--4--
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI----------ADPPNVMTI--H--  254 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~----------~~~~~~~~i--~--  254 (405)
                      .+.||-+|||+|                ++-+|.++|+.|...||+|.+....-..          .....+..+  .  
T Consensus         3 ~~~~KvalVTGa----------------~~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs   66 (252)
T PRK06947          3 NSDRKVVLITGA----------------SRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA   66 (252)
T ss_pred             CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             999908999388----------------3589999999999879989998089878999999999964992899984799


Q ss_pred             -HHHHHHHHHHHHHCC-CCCEEEEEHHHH
Q ss_conf             -657789999998505-888799740444
Q gi|254780622|r  255 -VERAEDMLQEVLKAL-PVDIAVMVSAVS  281 (405)
Q Consensus       255 -v~t~~em~~~~~~~~-~~D~~I~aAAVS  281 (405)
                       -+..+.+.+++.+.+ ..|++|.+|+..
T Consensus        67 ~~~~v~~~~~~~~~~~G~iD~lVnNAG~~   95 (252)
T PRK06947         67 NEADVIAMFDAVQAAFGRLDALVNNAGIV   95 (252)
T ss_pred             CHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             99999999999999849988999876435


No 182
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.79  E-value=0.052  Score=32.73  Aligned_cols=74  Identities=22%  Similarity=0.239  Sum_probs=42.0

Q ss_pred             CEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCC-CCCEEEE--EHHHH---HH
Q ss_conf             778984042010102135762157727889999999825883899841566------776-5674675--46577---89
Q gi|254780622|r  193 KRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IAD-PPNVMTI--HVERA---ED  260 (405)
Q Consensus       193 k~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~-~~~~~~i--~v~t~---~e  260 (405)
                      ++||||++               || =+|.++|+.+.++|++|.++.-..+      .+. ...+..+  .|...   ++
T Consensus         3 ~~VlITGa---------------ss-GIG~a~A~~la~~G~~v~l~~R~~~~L~~~~~~~~~~~~~~~~~Dv~d~~~~~~   66 (256)
T PRK07024          3 LKVFITGA---------------SS-GIGQALAREYARQGATLGLVARRTDALQAFAARLPKARVSVYAADVRDADALAA   66 (256)
T ss_pred             CEEEEECC---------------CH-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH
T ss_conf             98999846---------------02-999999999998899899998988999999997679976999811799999999


Q ss_pred             HHHHHHHCC-CCCEEEEEHHHHH
Q ss_conf             999998505-8887997404444
Q gi|254780622|r  261 MLQEVLKAL-PVDIAVMVSAVSD  282 (405)
Q Consensus       261 m~~~~~~~~-~~D~~I~aAAVSD  282 (405)
                      +.+.+.+.. ..|++|.+|.++-
T Consensus        67 ~~~~~~~~~g~iDilinNAGi~~   89 (256)
T PRK07024         67 AAADFIAAHGCPDVVIANAGISV   89 (256)
T ss_pred             HHHHHHHHHCCCCEEEECCCCCC
T ss_conf             99999998399879998885567


No 183
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.78  E-value=0.053  Score=32.65  Aligned_cols=45  Identities=20%  Similarity=0.383  Sum_probs=28.3

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE
Q ss_conf             977898404201010213576215772788-----999999982588389984
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~  239 (405)
                      |.=|-|+|.....   |..+.+-.++-|-|     ..||.|+...|-.|+.|+
T Consensus       125 G~IvnisS~~g~~---~~p~~~~Y~aSK~al~~~t~sla~El~~~gIrVn~v~  174 (270)
T PRK06179        125 GRIINISSVLGFL---PAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVE  174 (270)
T ss_pred             CEEEEECCHHHHC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_conf             5899986856627---7899707999999999999999998501296899998


No 184
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=95.74  E-value=0.065  Score=32.10  Aligned_cols=31  Identities=26%  Similarity=0.237  Sum_probs=17.6

Q ss_pred             CEEE-EEEECHHHHHHHHHHHHHHHH-CCCEEEEEEC
Q ss_conf             5699-995284789999999999998-7988999858
Q gi|254780622|r    6 KKIA-LIMCGSVAVYKSLDLIRRLRE-RGAVVIPVMT   40 (405)
Q Consensus         6 k~Il-lgvtGsiaa~k~~~l~~~L~~-~g~~V~vv~T   40 (405)
                      |||| -|.+|=|    .-.|++.|.+ .+++|.++-.
T Consensus         2 KkILVTGgaGFI----Gs~Lv~~Ll~~~~~~V~~~d~   34 (347)
T PRK11908          2 KKVLILGVNGFI----GHHLTKRILETTDWEVYGMDM   34 (347)
T ss_pred             CEEEEECCCCHH----HHHHHHHHHHHCCCEEEEEEC
T ss_conf             889997574389----999999999828978999979


No 185
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=95.63  E-value=0.069  Score=31.92  Aligned_cols=31  Identities=23%  Similarity=0.289  Sum_probs=20.4

Q ss_pred             EEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             99528478999999999999879889998585
Q gi|254780622|r   10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus        10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      +-|||+ +=+-.-.|++.|...|++|+.+-..
T Consensus         3 iLVtG~-tGfiG~~l~~~L~~~g~~V~~~~r~   33 (314)
T COG0451           3 ILVTGG-AGFIGSHLVERLLAAGHDVRGLDRL   33 (314)
T ss_pred             EEEECC-CCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf             999928-8777999999998589979999178


No 186
>pfam01370 Epimerase NAD dependent epimerase/dehydratase family. This family of proteins utilize NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions.
Probab=95.59  E-value=0.032  Score=34.09  Aligned_cols=97  Identities=15%  Similarity=0.179  Sum_probs=54.3

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCCC-C---CCCCCEEEEE--HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
Q ss_conf             7727889999999825883899841566-7---7656746754--65778999999850588879974044444322221
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAEVILISGPVS-I---ADPPNVMTIH--VERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIA  289 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~---~~~~~~~~i~--v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~  289 (405)
                      +||-.|..|++++..+|++|+.+.-... .   ......+.+.  +...++ .+++.+..+.|++||.||.+........
T Consensus         6 asGfiG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~dl~~~~~-~~~~~~~~~~D~VihlAa~~~~~~~~~~   84 (235)
T pfam01370         6 GTGFIGSALVRRLLQEGYEVIVLGRRRRSESLNTGRIRFRFHEGDLTDPDA-LERLLAEVQPDAVIHLAAQSGVGASFED   84 (235)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCHHH-HHHHHHHCCCCEEEECCCCCCCHHHHCC
T ss_conf             897999999999997879899998997301222114676599965889999-9999853899899989774783265519


Q ss_pred             HCCCCCCCCCCCCEEEEEECHHHHHHHHHCCC
Q ss_conf             01123345577510455218068988762148
Q gi|254780622|r  290 GTKIKRKDIGDTMRIDLMENPDILKIIGHHQC  321 (405)
Q Consensus       290 ~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~  321 (405)
                      ..+        .......-+..++....+.+.
T Consensus        85 ~~~--------~~~~N~~~t~~ll~~~~~~~~  108 (235)
T pfam01370        85 PAE--------FIRANVLGTLNLLEAARRAGV  108 (235)
T ss_pred             HHH--------HHHHHHHHHHHHHHHHHHCCC
T ss_conf             999--------999999999999999998399


No 187
>pfam04321 RmlD_sub_bind RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.
Probab=95.53  E-value=0.052  Score=32.70  Aligned_cols=33  Identities=30%  Similarity=0.462  Sum_probs=21.5

Q ss_pred             HHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHH
Q ss_conf             9999999998798899985856863069899999
Q gi|254780622|r   21 SLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGA   54 (405)
Q Consensus        21 ~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~   54 (405)
                      .-.|++.|.+.|++|.++ +..-..+..+..++.
T Consensus        11 Gs~l~~~L~~~g~~v~~~-~r~~~D~~d~~~l~~   43 (284)
T pfam04321        11 GRELTRLLAERGVEVVAL-DRPELDLTDPEAVAA   43 (284)
T ss_pred             HHHHHHHHHHCCCEEEEE-CCCCCCCCCHHHHHH
T ss_conf             999999998689989995-486257889999999


No 188
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.52  E-value=0.079  Score=31.55  Aligned_cols=23  Identities=30%  Similarity=0.319  Sum_probs=12.9

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             772788999999982588389984
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~V~li~  239 (405)
                      ||| .|.++|+.+..+|++|.++.
T Consensus        10 ssG-IG~a~A~~la~~G~~v~l~~   32 (243)
T PRK07102         10 TSD-IARACARRYAAAGARLYLAA   32 (243)
T ss_pred             CHH-HHHHHHHHHHHCCCEEEEEE
T ss_conf             459-99999999998799899998


No 189
>PRK08643 acetoin reductase; Validated
Probab=95.46  E-value=0.063  Score=32.17  Aligned_cols=98  Identities=20%  Similarity=0.207  Sum_probs=54.9

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCE-----EEEEHHH
Q ss_conf             9778984042010102135762157727889999999825883899841566--------77-65674-----6754657
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNV-----MTIHVER  257 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~-----~~i~v~t  257 (405)
                      +|-+|||+|                ++-+|.++|+.|.+.||+|.+..-...        +. .....     .+-+-++
T Consensus         2 nKvalVTGg----------------~~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~~~~~~~~~~~~~Dvt~~~~   65 (256)
T PRK08643          2 SKVALVTGA----------------GQGIGFAIAKRLVEDGFKVAIVDYNEETAKAAADKLSSDGGKAIAVKADVSNRDQ   65 (256)
T ss_pred             CCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHH
T ss_conf             849999575----------------7889999999999879999999698899999999998539909999805899999


Q ss_pred             HHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
Q ss_conf             789999998505-8887997404444432222101123345577510455218
Q gi|254780622|r  258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN  309 (405)
Q Consensus       258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~  309 (405)
                      .+.+.+++.+.+ +.|++|-+|++....+-.-    +.-.+....+.+.|.-.
T Consensus        66 v~~~~~~~~~~~G~iDiLVNnAG~~~~~~~~~----~~~~~w~~~~~vNl~g~  114 (256)
T PRK08643         66 VFDAVQQVVDTFGDLNVVVNNAGLAPTTPIDT----ITEEQFKKVYGINVGGV  114 (256)
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH----CCHHHHHHHHHHHCHHH
T ss_conf             99999999998299879998998899988255----99999999999976368


No 190
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.46  E-value=0.066  Score=32.04  Aligned_cols=79  Identities=24%  Similarity=0.180  Sum_probs=50.1

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCCCEEEE-----E
Q ss_conf             17977898404201010213576215772788999999982588389984156677----------65674675-----4
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA----------DPPNVMTI-----H  254 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~----------~~~~~~~i-----~  254 (405)
                      +.+|-+|||+|                |+-+|.++|+.|.+.||+|.+....-...          ....+..+     +
T Consensus         3 ~~~KValVTGg----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~   66 (259)
T PRK12745          3 STRPVALVTGG----------------RRGIGLGIALALAAGGFDLAINDRPDAEKLAATQQELRALGVEVIFFPADVAD   66 (259)
T ss_pred             CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             99999999686----------------78999999999998799899997986678999999998449948999846899


Q ss_pred             HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHH
Q ss_conf             657789999998505-888799740444443
Q gi|254780622|r  255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWR  284 (405)
Q Consensus       255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~  284 (405)
                      .++.+.+.+++.+.+ +.|++|.+|.++.+.
T Consensus        67 ~~~~~~~~~~~~~~fg~iDiLVNNAG~~~~~   97 (259)
T PRK12745         67 LSAHEATLDAAQDAWGRIDCLVNNAGVGVKK   97 (259)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf             9999999999999829988999847536688


No 191
>PRK07707 consensus
Probab=95.36  E-value=0.073  Score=31.77  Aligned_cols=21  Identities=48%  Similarity=0.499  Sum_probs=12.4

Q ss_pred             CHHHHHHHHHHHHCCCCEEEE
Q ss_conf             278899999998258838998
Q gi|254780622|r  218 GQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       218 Gk~G~~iA~~~~~~Ga~V~li  238 (405)
                      +-.|.++|+.|...|++|.+.
T Consensus        12 ~GIG~aia~~la~~Ga~V~i~   32 (239)
T PRK07707         12 GGIGQAISKQLAQDGYTVYLH   32 (239)
T ss_pred             CHHHHHHHHHHHHCCCEEEEE
T ss_conf             789999999999879989998


No 192
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.34  E-value=0.075  Score=31.69  Aligned_cols=49  Identities=27%  Similarity=0.380  Sum_probs=31.4

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHH-----HHHHHHHHHHCCCCEEEEE-CCC
Q ss_conf             797789840420101021357621577278-----8999999982588389984-156
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQ-----GHAIAKSLAYFGAEVILIS-GPV  242 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~-----G~~iA~~~~~~Ga~V~li~-g~~  242 (405)
                      .|+=|.|+|.+-.-+   .-+.+..|+-|-     ..+||.|+..+|-.|..|+ |++
T Consensus       124 ~G~IV~isS~ag~~~---~p~~~~Y~aSK~Al~~~t~sLa~El~~~GIrVn~I~PG~v  178 (257)
T PRK09291        124 KGKIVFVSSIAGLIT---GPFTGAYCASKHALEAIAEAMHAELAPFGIQVATVNPGPY  178 (257)
T ss_pred             CCEEEEECCHHHCCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf             968999878776689---9998419999999999999999984300958999984799


No 193
>PRK12743 acetoin dehydrogenase; Provisional
Probab=95.26  E-value=0.082  Score=31.43  Aligned_cols=68  Identities=15%  Similarity=0.115  Sum_probs=37.8

Q ss_pred             CHHHHHHHHHHHHCCCCEEEEECCCCC-------C-CCCCEE--EE-----EHHHHHHHHHHHHHCC-CCCEEEEEHHHH
Q ss_conf             278899999998258838998415667-------7-656746--75-----4657789999998505-888799740444
Q gi|254780622|r  218 GQQGHAIAKSLAYFGAEVILISGPVSI-------A-DPPNVM--TI-----HVERAEDMLQEVLKAL-PVDIAVMVSAVS  281 (405)
Q Consensus       218 Gk~G~~iA~~~~~~Ga~V~li~g~~~~-------~-~~~~~~--~i-----~v~t~~em~~~~~~~~-~~D~~I~aAAVS  281 (405)
                      +-+|.++|+.|...||+|.+.......       . ...+.+  .+     .-+..+.+.+++.+.+ ..|++|.+|.+.
T Consensus        12 ~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~~~G~iDilVNnAG~~   91 (253)
T PRK12743         12 SGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVVSHGVRAEIVHLDLSNLPEGAQAIEKLIQRLGRLDVLVNNAGAM   91 (253)
T ss_pred             CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf             89999999999987998999748997999999999994599189999048999999999999999819998999899899


Q ss_pred             HHHH
Q ss_conf             4432
Q gi|254780622|r  282 DWRF  285 (405)
Q Consensus       282 Df~~  285 (405)
                      .+.+
T Consensus        92 ~~~~   95 (253)
T PRK12743         92 TKAP   95 (253)
T ss_pred             CCCC
T ss_conf             9998


No 194
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.24  E-value=0.11  Score=30.67  Aligned_cols=20  Identities=20%  Similarity=0.142  Sum_probs=10.6

Q ss_pred             HHHHHHHHHHHCCCCEEEEE
Q ss_conf             88999999982588389984
Q gi|254780622|r  220 QGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       220 ~G~~iA~~~~~~Ga~V~li~  239 (405)
                      .|.++|+.+..+|++|.+..
T Consensus        13 IG~aia~~l~~~G~~V~~~~   32 (225)
T PRK08177         13 LGLGLVDRLLERGWQVTATV   32 (225)
T ss_pred             HHHHHHHHHHHCCCEEEEEE
T ss_conf             99999999998869999997


No 195
>PRK08017 short chain dehydrogenase; Provisional
Probab=95.23  E-value=0.058  Score=32.42  Aligned_cols=29  Identities=21%  Similarity=0.162  Sum_probs=16.0

Q ss_pred             EEECCCCCHHH-----HHHHHHHHHCCCCEEEEE
Q ss_conf             76215772788-----999999982588389984
Q gi|254780622|r  211 YIANRSSGQQG-----HAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       211 ~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~  239 (405)
                      ..+-.|+-|-|     ..|+.|+...|-.|+.|+
T Consensus       142 ~~~~Y~asKaal~~~~~sL~~El~~~gI~V~~V~  175 (256)
T PRK08017        142 GRGAYAASKYALEAWSDALRMELRHSGIKVSLIE  175 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             9748999999999999999998462192899997


No 196
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.11  E-value=0.14  Score=30.05  Aligned_cols=77  Identities=21%  Similarity=0.286  Sum_probs=36.7

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-------CCCCCCEEEE-----EHHHHH
Q ss_conf             9778984042010102135762157727889999999825883899841566-------7765674675-----465778
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-------IADPPNVMTI-----HVERAE  259 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-------~~~~~~~~~i-----~v~t~~  259 (405)
                      ||.+|||+|                ++-.|.++|+.|...|+.|.+..-...       ......+..+     .-...+
T Consensus         2 nKvalITGg----------------s~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~~~~~~~~Dv~~~~~~~   65 (256)
T PRK07074          2 SRTALVTGA----------------AGGIGQALARRFLAAGDRVLALDIDRAALAAFVDALGDAAVAPVICDLTDAASVE   65 (256)
T ss_pred             CCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHHHHH
T ss_conf             988999884----------------6899999999999869999999798899999999826997799997279999999


Q ss_pred             HHHHHHHHCCCCCEEEEEHHHHHHH
Q ss_conf             9999998505888799740444443
Q gi|254780622|r  260 DMLQEVLKALPVDIAVMVSAVSDWR  284 (405)
Q Consensus       260 em~~~~~~~~~~D~~I~aAAVSDf~  284 (405)
                      +|.+.+.+.-+.|++|..|++....
T Consensus        66 ~~~~~i~~~g~iDiLVNNAG~~~~~   90 (256)
T PRK07074         66 RLAAALANEGPVDVLVANAGAARAA   90 (256)
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf             9999999859987999888778998


No 197
>pfam02719 Polysacc_synt_2 Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI).
Probab=95.06  E-value=0.19  Score=29.13  Aligned_cols=30  Identities=13%  Similarity=0.240  Sum_probs=17.1

Q ss_pred             EEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             9528478999999999999879889998585
Q gi|254780622|r   11 IMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus        11 gvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      .|||+---+ .-.|++.|.+.|..+-++...
T Consensus         2 LVTGGaGFI-GS~Lv~~Ll~~g~~~v~v~d~   31 (280)
T pfam02719         2 LVTGGGGSI-GSELCRQILKFNPKKIILFSR   31 (280)
T ss_pred             EEECCCCHH-HHHHHHHHHHCCCCEEEEEEC
T ss_conf             997488679-999999999689988999908


No 198
>PRK07454 short chain dehydrogenase; Provisional
Probab=94.89  E-value=0.12  Score=30.48  Aligned_cols=79  Identities=18%  Similarity=0.160  Sum_probs=47.6

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C-CCC--CEEEE-----EHH
Q ss_conf             79778984042010102135762157727889999999825883899841566-7-----7-656--74675-----465
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A-DPP--NVMTI-----HVE  256 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~-~~~--~~~~i-----~v~  256 (405)
                      ..|.+|||++                |+=.|.++|+.|...|++|.++.-... +     + ...  .+..+     +-+
T Consensus         5 ~mKvalITGa----------------s~GIG~a~A~~la~~G~~V~l~~R~~~~l~~~~~e~~~~g~~~~~~~~Dvt~~~   68 (241)
T PRK07454          5 SMPTALITGA----------------SRGIGKATALAFAKAGWDLALVARSQDALEALAEELRSTGVKVAAYSIDLSNPE   68 (241)
T ss_pred             CCCEEEECCC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHH
T ss_conf             9988999175----------------878999999999987998999989999999999999965992899995189999


Q ss_pred             HHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             7789999998505-8887997404444432
Q gi|254780622|r  257 RAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       257 t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
                      ..+++.+.+.+.+ ..|++|.+|.+..+.+
T Consensus        69 ~v~~~~~~~~~~~G~iDiLVnNAG~~~~~~   98 (241)
T PRK07454         69 AIAPGIAELLEQFGCPSVLINNAGAAYTGP   98 (241)
T ss_pred             HHHHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf             999999999997599889998898899999


No 199
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.81  E-value=0.067  Score=32.00  Aligned_cols=163  Identities=16%  Similarity=0.079  Sum_probs=81.9

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCCCCC-CCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCC
Q ss_conf             772788999999982588389984156677-6567467546577899999985058887997404444432222101123
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAEVILISGPVSIA-DPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIK  294 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kik  294 (405)
                      .||+-|..|++++..||++||.|.-..+.. ..+++...+-. .-|+.........+|++|.+=-...  +.+  +...+
T Consensus         8 AsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~D-ifd~~~~a~~l~g~DaVIsA~~~~~--~~~--~~~~~   82 (211)
T COG2910           8 ASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKD-IFDLTSLASDLAGHDAVISAFGAGA--SDN--DELHS   82 (211)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCEEECCC-CCCHHHHHHHHCCCCEEEEECCCCC--CCH--HHHHH
T ss_conf             374567999999986798048998076766522353020002-2274566766358766997215788--871--57788


Q ss_pred             CCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEE--CC---C--------------CHHHHHH--HHHHH-HCCCCEE
Q ss_conf             345577510455218068988762148995899981--14---1--------------2389999--99999-7499899
Q gi|254780622|r  295 RKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFA--AE---T--------------QCIEQNA--REKLL-NKGADFI  352 (405)
Q Consensus       295 k~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFk--aE---T--------------~~l~~~A--~~Kl~-~K~~D~I  352 (405)
                      |.            -.-++..+.....+..++||=+  +|   .              ......|  .++|+ .+++||.
T Consensus        83 k~------------~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WT  150 (211)
T COG2910          83 KS------------IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWT  150 (211)
T ss_pred             HH------------HHHHHHHHHHCCCEEEEEECCCCCEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             89------------999999986159705999847420587688455058998566779998778999998635676459


Q ss_pred             EEECCCCCCCCCCCCCEEEE------EECCCCEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             99205776777776611899------9836985972789989999999999999
Q gi|254780622|r  353 VSNCILPDTGFVGKEWNKVS------IVFPDKIEEYPELPKAEVADRLCHLIVE  400 (405)
Q Consensus       353 VAN~i~~~~~~fgsd~n~v~------li~~~~~~~~~~~sK~~iA~~Il~~i~~  400 (405)
                      ..-+-.. -.+ |..+++..      +.+.+|..   +.|=.+.|..++|++.+
T Consensus       151 fvSPaa~-f~P-GerTg~yrlggD~ll~n~~G~S---rIS~aDYAiA~lDe~E~  199 (211)
T COG2910         151 FVSPAAF-FEP-GERTGNYRLGGDQLLVNAKGES---RISYADYAIAVLDELEK  199 (211)
T ss_pred             EECCHHH-CCC-CCCCCCEEECCCEEEECCCCCE---EEEHHHHHHHHHHHHHC
T ss_conf             9671784-577-6556856763635777488850---34489999999987746


No 200
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=94.79  E-value=0.19  Score=29.06  Aligned_cols=38  Identities=32%  Similarity=0.377  Sum_probs=19.6

Q ss_pred             CCCCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             988855699-995284789999999999998798899985856
Q gi|254780622|r    1 MDLSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus         1 m~l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      |.+++|.++ .|.+++|    ...+++.|.++|+.|.++....
T Consensus         1 ~~~~~k~vlITGas~Gi----G~aia~~l~~~G~~v~~~~~~~   39 (251)
T COG1028           1 MDLSGKVALVTGASSGI----GRAIARALAREGARVVVAARRS   39 (251)
T ss_pred             CCCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEEEEECCC
T ss_conf             99999889998988718----9999999998899799996797


No 201
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=94.77  E-value=0.11  Score=30.55  Aligned_cols=117  Identities=21%  Similarity=0.169  Sum_probs=64.4

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--------C--CCCCEEEEE--H---H
Q ss_conf             97789840420101021357621577278899999998258838998415667--------7--656746754--6---5
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--------A--DPPNVMTIH--V---E  256 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--------~--~~~~~~~i~--v---~  256 (405)
                      +|-+|||+|                |+-.|.++|+.|...|++|.+..-....        .  ....+..+.  +   +
T Consensus         2 ~KvalITGa----------------s~GIG~a~a~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~   65 (245)
T PRK12824          2 KKIALVTGA----------------KRGIGSAIARELLADGYRVIATYFGNYDAAKDWFEEYGFTEDQVRLKSLDVTDTE   65 (245)
T ss_pred             CCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHH
T ss_conf             859999478----------------8889999999999879989999588077899999987404993899991389999


Q ss_pred             HHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH----HHHHCCCCCCEEEEEE
Q ss_conf             7789999998505-888799740444443222210112334557751045521806898----8762148995899981
Q gi|254780622|r  257 RAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK----IIGHHQCRPSIVVGFA  330 (405)
Q Consensus       257 t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~----~i~~~k~~~~~lVGFk  330 (405)
                      ..+.+.+.+.+.+ ..|++|.+|.++...+-.  +  +.-.+....+.+.|.-.--+.+    .+.++  ....+|-+.
T Consensus        66 ~~~~~v~~~~~~~g~iDiLVnnAG~~~~~~~~--~--~~~e~w~~~~~vNl~~~f~~~~~~~~~m~~~--~~G~IVnis  138 (245)
T PRK12824         66 ECQEALARIEEEEGPVDILVNNAGITRDSGFK--R--MSHQEWNDVINTNLNSVFNVTQPLFPAMCEQ--GYGRIINIS  138 (245)
T ss_pred             HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH--H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEEC
T ss_conf             99999999999749998999898889999902--3--9999999999997341599999999999983--995599974


No 202
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.76  E-value=0.095  Score=31.04  Aligned_cols=20  Identities=35%  Similarity=0.272  Sum_probs=9.5

Q ss_pred             HHHHHHHHHHHCCCCEEEEE
Q ss_conf             88999999982588389984
Q gi|254780622|r  220 QGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       220 ~G~~iA~~~~~~Ga~V~li~  239 (405)
                      .|.++|+++..+|++|.++.
T Consensus        12 IG~alA~~la~~G~~V~l~~   31 (270)
T PRK05650         12 LGRAIALRWAREGWRLALAD   31 (270)
T ss_pred             HHHHHHHHHHHCCCEEEEEE
T ss_conf             99999999998899899997


No 203
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.60  E-value=0.38  Score=27.16  Aligned_cols=73  Identities=22%  Similarity=0.249  Sum_probs=39.1

Q ss_pred             CCCCCEEEEEEEC-HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHH--CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8885569999528-478999999999999879889998585686306989999974--7975820767887787743001
Q gi|254780622|r    2 DLSGKKIALIMCG-SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAIS--NRRVYTHLLSYKEGYESNHIQL   78 (405)
Q Consensus         2 ~l~~k~IllgvtG-siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt--~~~v~~~~~~~~~~~~~~Hi~l   78 (405)
                      +|+||||+|.=-| |-     .-++|.|.+.|++|.++-......  .+...+.+-  |-++...   ..      +-.+
T Consensus        11 ~~~gk~v~V~GlG~sG-----~s~a~~L~~~G~~v~~~D~~~~~~--~~~~~~~l~~~g~~~~~g---~~------~~~~   74 (481)
T PRK01438         11 DWSGLRVVVAGLGVSG-----FPAADALHELGASVTVVADGDDDR--SRERAALLEVLGATVRLG---DG------ETTL   74 (481)
T ss_pred             HCCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEECCCCCC--CHHHHHHHHHCCCEEEEC---CC------HHHH
T ss_conf             7189989999575889-----999999996799899997998744--868999888549889968---87------5666


Q ss_pred             CCCCCEEEEEEC
Q ss_conf             144655788411
Q gi|254780622|r   79 ANECDLLVVAPA   90 (405)
Q Consensus        79 ~~~aD~~iVaPa   90 (405)
                      -..+|++|+.|.
T Consensus        75 ~~~~d~vV~SPG   86 (481)
T PRK01438         75 PEGTELVVTSPG   86 (481)
T ss_pred             HCCCCEEEECCC
T ss_conf             248999998997


No 204
>PRK06180 short chain dehydrogenase; Provisional
Probab=94.59  E-value=0.15  Score=29.73  Aligned_cols=49  Identities=29%  Similarity=0.302  Sum_probs=30.9

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE-CCC
Q ss_conf             7977898404201010213576215772788-----999999982588389984-156
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS-GPV  242 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~-g~~  242 (405)
                      .|.=|.|+|...+-+   ....+-.++-|-+     ..||.|+...|-.|+.|+ |++
T Consensus       129 ~G~IvnisS~ag~~~---~p~~~~Y~aSK~Al~~lt~sLa~El~~~gIrVn~V~PG~v  183 (277)
T PRK06180        129 RGHIVNITSMGGLIT---MPGIAYYCGSKFALEGISEALAKEVAPFGIHVTAVEPGSF  183 (277)
T ss_pred             CCEEEEECCHHHCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
T ss_conf             965775354665257---9998279999999999999999984323868999970787


No 205
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.57  E-value=0.23  Score=28.61  Aligned_cols=18  Identities=22%  Similarity=0.289  Sum_probs=12.0

Q ss_pred             HHHHHHHHHCCCCEEEEE
Q ss_conf             999999982588389984
Q gi|254780622|r  222 HAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       222 ~~iA~~~~~~Ga~V~li~  239 (405)
                      ..|+.++..+|-.|+.|+
T Consensus       153 ~sLa~el~~~gI~V~~V~  170 (241)
T PRK06101        153 RTLALDLKKKGIKVVTVF  170 (241)
T ss_pred             HHHHHHHCCCCCEEEEEE
T ss_conf             999998525495899997


No 206
>pfam00208 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase.
Probab=94.55  E-value=0.39  Score=27.08  Aligned_cols=46  Identities=33%  Similarity=0.417  Sum_probs=30.5

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEE
Q ss_conf             01797789840420101021357621577278899999998258838998415-6677656746
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP-VSIADPPNVM  251 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~-~~~~~~~~~~  251 (405)
                      .|+|++|.|.+                 .|..|...|+.+..+|++|.-++.. ..+-.|.+++
T Consensus        29 ~l~g~~v~IqG-----------------fGnVG~~~a~~l~~~GakvvavsD~~G~i~~~~Gld   75 (237)
T pfam00208        29 SLEGKTVAVQG-----------------FGNVGSYAAEKLLELGAKVVAVSDSSGYIYDPNGID   75 (237)
T ss_pred             CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCC
T ss_conf             87899999989-----------------889999999999987996999982876799999999


No 207
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids 
Probab=94.47  E-value=0.41  Score=26.97  Aligned_cols=47  Identities=28%  Similarity=0.379  Sum_probs=31.8

Q ss_pred             CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEE
Q ss_conf             001797789840420101021357621577278899999998258838998415-6677656746
Q gi|254780622|r  188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP-VSIADPPNVM  251 (405)
Q Consensus       188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~-~~~~~~~~~~  251 (405)
                      ..|+|++|.|.+                 .|..|...|+.+...||.|.-|+.. ..+..|.+++
T Consensus        27 ~~l~g~~v~IqG-----------------~GnVG~~~a~~L~~~Gakvv~vsD~~G~i~~~~Gld   74 (227)
T cd01076          27 IGLAGARVAIQG-----------------FGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLD   74 (227)
T ss_pred             CCCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCC
T ss_conf             897899999989-----------------889999999999987995999984787388888899


No 208
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.47  E-value=0.18  Score=29.28  Aligned_cols=46  Identities=15%  Similarity=0.198  Sum_probs=31.5

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE
Q ss_conf             7977898404201010213576215772788-----999999982588389984
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~  239 (405)
                      .|.=|.|+|.+.+-   +....+-.++-|-+     ..||.|+...|-.|++|.
T Consensus       127 ~G~IinisS~~g~~---~~p~~~~Y~AsK~Al~g~tesLa~El~~~gI~V~~V~  177 (276)
T PRK06482        127 GGRIVQVSSEGGQI---AYPGFSLYHASKWGIEGFVESVRQEVAPFGIGFTIVE  177 (276)
T ss_pred             CCEEEEECCHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             97799954524346---8999768999999999999999998443193899997


No 209
>PRK07904 short chain dehydrogenase; Provisional
Probab=94.46  E-value=0.21  Score=28.77  Aligned_cols=14  Identities=21%  Similarity=0.131  Sum_probs=6.6

Q ss_pred             HHHHHHHHHHHCCC
Q ss_conf             88999999982588
Q gi|254780622|r  220 QGHAIAKSLAYFGA  233 (405)
Q Consensus       220 ~G~~iA~~~~~~Ga  233 (405)
                      .|.++|+.+..+|+
T Consensus        20 IG~a~a~~~~~~g~   33 (253)
T PRK07904         20 IGLAICERYLRNAP   33 (253)
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             99999999997498


No 210
>PRK09730 hypothetical protein; Provisional
Probab=94.45  E-value=0.17  Score=29.38  Aligned_cols=65  Identities=18%  Similarity=0.103  Sum_probs=41.7

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCC--EEEE-----EHHHHHHHHHHHHHCC-CCCEEEEEHHH
Q ss_conf             72788999999982588389984156677--------6567--4675-----4657789999998505-88879974044
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPN--VMTI-----HVERAEDMLQEVLKAL-PVDIAVMVSAV  280 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~--~~~i-----~v~t~~em~~~~~~~~-~~D~~I~aAAV  280 (405)
                      |+-.|.++|+.|...|++|.+........        ...+  +..+     +-+..+++.+++.+.+ ..|++|.+|++
T Consensus        10 s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~i~~~~g~id~LVNNAG~   89 (247)
T PRK09730         10 SRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGI   89 (247)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             26999999999998799999966998789999999999749928999825899999999999999975995599989863


Q ss_pred             H
Q ss_conf             4
Q gi|254780622|r  281 S  281 (405)
Q Consensus       281 S  281 (405)
                      .
T Consensus        90 ~   90 (247)
T PRK09730         90 L   90 (247)
T ss_pred             C
T ss_conf             5


No 211
>TIGR01283 nifE nitrogenase MoFe cofactor biosynthesis protein NifE; InterPro: IPR005973    The enzyme responsible for nitrogen fixation, the nitrogenase, shows a high degree of conservation of structure, function, and amino acid sequence across wide phylogenetic ranges. All known Mo-nitrogenases consist of two components, component I (also called dinitrogenase, or Fe-Mo protein), an alpha2beta2 tetramer encoded by the nifD and nifK genes, and component II (dinitrogenase reductase, or Fe protein) a homodimer encoded by the nifH gene. Two operons, nifDK and nifEN, encode a tetrameric (alpha2beta2 and N2E2) enzymatic complex. Nitrogenase contains two unusual rare metal clusters; one of them is the iron molybdenum cofactor (FeMo-co), which is considered to be the site of dinitrogen reduction and whose biosynthesis requires the products of nifNE and of some other nif genes. It has been proposed that NifNE might serve as a scaffold upon which FeMo-co is built and then inserted into component I. ; GO: 0005515 protein binding, 0006461 protein complex assembly, 0009399 nitrogen fixation.
Probab=94.42  E-value=0.071  Score=31.85  Aligned_cols=73  Identities=19%  Similarity=0.300  Sum_probs=48.8

Q ss_pred             CCCCCCCCEEEEEECC-CHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-C--------CCCEEEEEH
Q ss_conf             3200179778984042-01010213576215772788999999982588389984156677-6--------567467546
Q gi|254780622|r  186 KELLLKGKRALVTSGP-TYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-D--------PPNVMTIHV  255 (405)
Q Consensus       186 ~~~~l~gk~vlITaG~-T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-~--------~~~~~~i~v  255 (405)
                      .+..|+||||+|=.|| -..                 +.+-.+|...|-+|...-...+.+ +        -++...+.=
T Consensus       331 yR~~L~GKkaaiY~GGa~Ks-----------------wSlv~Al~dLGMeVV~~GTqkg~~EDy~~I~e~~~~~~~m~Dd  393 (470)
T TIGR01283       331 YRERLKGKKAAIYTGGAVKS-----------------WSLVSALQDLGMEVVATGTQKGTEEDYERIRELMGEGTVMLDD  393 (470)
T ss_pred             HHHHHCCCEEEEECCCHHHH-----------------HHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEC
T ss_conf             89973498899865864789-----------------9999888457917999830079888999999970799678625


Q ss_pred             HHHHHHHHHHHHCCCCCEEEE
Q ss_conf             577899999985058887997
Q gi|254780622|r  256 ERAEDMLQEVLKALPVDIAVM  276 (405)
Q Consensus       256 ~t~~em~~~~~~~~~~D~~I~  276 (405)
                      .++.|+.+-+.+. ++|++|.
T Consensus       394 ~~p~~L~~~~~~~-~ADllia  413 (470)
T TIGR01283       394 ANPRELLKLLLEY-KADLLIA  413 (470)
T ss_pred             CCHHHHHHHHHHH-CCCEEEE
T ss_conf             8878999999872-8988985


No 212
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids 
Probab=94.39  E-value=0.15  Score=29.80  Aligned_cols=134  Identities=22%  Similarity=0.297  Sum_probs=71.1

Q ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH----CCHHHH-HHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             9888556999952847899999999999987988999858568630----698999-99747975820767887787743
Q gi|254780622|r    1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKF----ITPLIV-GAISNRRVYTHLLSYKEGYESNH   75 (405)
Q Consensus         1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~f----i~~~~l-~~lt~~~v~~~~~~~~~~~~~~H   75 (405)
                      .+|+|||+++-=.|.++-+    +++.|.+.|+.|..|--.+..-+    +....+ +....+.-+....+...- +.. 
T Consensus        27 ~~l~g~~v~IqG~GnVG~~----~a~~L~~~Gakvv~vsD~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~-~~~-  100 (227)
T cd01076          27 IGLAGARVAIQGFGNVGSH----AARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERI-TNE-  100 (227)
T ss_pred             CCCCCCEEEEECCCHHHHH----HHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC-CCC-
T ss_conf             8978999999898899999----9999998799599998478738888889999999999965980267887538-962-


Q ss_pred             CCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf             00114465578841118889885202455214666752279968984056600000388999999986400013465212
Q gi|254780622|r   76 IQLANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESG  155 (405)
Q Consensus        76 i~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g  155 (405)
                      --+...+|+++-| |+-|.|..            -....-++++++=-|      ++|.+.+.-+.|++.|+.+++ .. 
T Consensus       101 ~~~~~~~DI~iP~-A~~~~I~~------------~~a~~l~ak~I~EgA------N~p~t~~A~~~L~~rgI~viP-D~-  159 (227)
T cd01076         101 ELLELDCDILIPA-ALENQITA------------DNADRIKAKIIVEAA------NGPTTPEADEILHERGVLVVP-DI-  159 (227)
T ss_pred             CHHCCCCCEEEEC-CCCCCCCH------------HHHHHCCCEEEEECC------CCCCCHHHHHHHHHCCCEEEC-CH-
T ss_conf             3104788789877-76697799------------998544761998457------899898899999988698968-07-


Q ss_pred             HHHHCCC
Q ss_conf             5531032
Q gi|254780622|r  156 AMAESNG  162 (405)
Q Consensus       156 ~la~c~~  162 (405)
                       ++++|.
T Consensus       160 -laNaGG  165 (227)
T cd01076         160 -LANAGG  165 (227)
T ss_pred             -HHCCCC
T ss_conf             -744877


No 213
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.34  E-value=0.17  Score=29.41  Aligned_cols=37  Identities=19%  Similarity=0.368  Sum_probs=19.1

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH
Q ss_conf             8885569999528478999999999999879889998585686
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ   44 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~   44 (405)
                      +|++|-++++=+|+|-    ..+++.|. .|+.|.+ ...+.+
T Consensus         2 rL~~kV~v~tGa~GIG----~aiA~~la-~Ga~vvi-~~~~~~   38 (277)
T PRK06940          2 NMSKEVVVVIGAGGMG----QAIARRVG-SGKTVLL-ADYNEE   38 (277)
T ss_pred             CCCCCEEEECCCCHHH----HHHHHHHH-HCCEEEE-EECCHH
T ss_conf             9899299997816999----99999998-1998999-989889


No 214
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=94.28  E-value=0.26  Score=28.18  Aligned_cols=66  Identities=24%  Similarity=0.344  Sum_probs=44.9

Q ss_pred             HHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEEEEEHH
Q ss_conf             9986310132001797789840420101021357621577278899999998258838998415-667765674675465
Q gi|254780622|r  178 ITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP-VSIADPPNVMTIHVE  256 (405)
Q Consensus       178 ~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~-~~~~~~~~~~~i~v~  256 (405)
                      +.+...+....+|+|++|.|-+                 .|..|...|+.+...|++|.-|+.. ..+-.|.|+....+.
T Consensus        24 ~~~~~~~~~~~~l~g~~vaIQG-----------------fGnVG~~aA~~l~e~GakvVaVsD~~G~i~~~~Gld~~~l~   86 (254)
T cd05313          24 FVEEMLKDRNETLKGKRVAISG-----------------SGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLA   86 (254)
T ss_pred             HHHHHHHHCCCCCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHH
T ss_conf             9999999679695899999989-----------------77999999999997799799998578508879999889999


Q ss_pred             HHHH
Q ss_conf             7789
Q gi|254780622|r  257 RAED  260 (405)
Q Consensus       257 t~~e  260 (405)
                      ...+
T Consensus        87 ~l~~   90 (254)
T cd05313          87 ELKE   90 (254)
T ss_pred             HHHH
T ss_conf             9999


No 215
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=94.26  E-value=0.28  Score=28.05  Aligned_cols=29  Identities=17%  Similarity=0.500  Sum_probs=18.5

Q ss_pred             EEEECHHHHHHHHHHHHHHHHCCCE-EEEEE
Q ss_conf             9952847899999999999987988-99985
Q gi|254780622|r   10 LIMCGSVAVYKSLDLIRRLRERGAV-VIPVM   39 (405)
Q Consensus        10 lgvtGsiaa~k~~~l~~~L~~~g~~-V~vv~   39 (405)
                      +-|||+---+ .-.|++.|.+.|++ |.++=
T Consensus         2 ILVTGgaGFI-GS~l~~~L~~~G~~~V~~~D   31 (308)
T PRK11150          2 IIVTGGAGFI-GSNIVKALNDKGITDILVVD   31 (308)
T ss_pred             EEEEECCCHH-HHHHHHHHHHCCCCCEEEEE
T ss_conf             9994059799-99999999977998099997


No 216
>KOG1205 consensus
Probab=94.19  E-value=0.29  Score=27.96  Aligned_cols=28  Identities=14%  Similarity=0.216  Sum_probs=15.4

Q ss_pred             ECCCCCHHHHHH-HHHHHHHHHHHH--CCCC
Q ss_conf             405660000038-899999998640--0013
Q gi|254780622|r  122 APAMNFMMWAKP-ATQRNVEILQKD--GCYF  149 (405)
Q Consensus       122 aPaMn~~M~~~p-~~~~nl~~L~~~--g~~v  149 (405)
                      -+.|++|-|-.- .|+.-+..+++.  |++|
T Consensus       116 ~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIV  146 (282)
T KOG1205         116 RNVMDTNVFGTVYLTKAALPSMKKRNDGHIV  146 (282)
T ss_pred             HHHHHHHCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             8771000402489999998876632897499


No 217
>PRK05993 short chain dehydrogenase; Provisional
Probab=94.16  E-value=0.27  Score=28.07  Aligned_cols=49  Identities=24%  Similarity=0.358  Sum_probs=32.2

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE-CCC
Q ss_conf             7977898404201010213576215772788-----999999982588389984-156
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS-GPV  242 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~-g~~  242 (405)
                      .|.=|.|+|....-+   ..+.+-.++-|-+     .+|+.|+...|-+|++|. |++
T Consensus       127 ~G~IVnisSi~g~~~---~p~~~~Y~aSK~Av~~~~~sLr~El~~~gI~V~~i~PG~v  181 (277)
T PRK05993        127 HGRIVQCSSILGLVP---MKYRGAYNASKFAIEGLSDTLRMELQGSGIHVSLIEPGPI  181 (277)
T ss_pred             CCEEEEECCHHHCCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             838999888444888---9998389999999999999999985632868999964888


No 218
>KOG1210 consensus
Probab=94.15  E-value=0.16  Score=29.53  Aligned_cols=20  Identities=25%  Similarity=0.386  Sum_probs=11.3

Q ss_pred             HHHHHHHHHHHCCCCEEEEE
Q ss_conf             88999999982588389984
Q gi|254780622|r  220 QGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       220 ~G~~iA~~~~~~Ga~V~li~  239 (405)
                      ++.+|.+|+..+|..|++..
T Consensus       195 La~~l~qE~i~~~v~Vt~~~  214 (331)
T KOG1210         195 LAEALRQELIKYGVHVTLYY  214 (331)
T ss_pred             HHHHHHHHHHHCCEEEEEEC
T ss_conf             99999998765266999972


No 219
>KOG1502 consensus
Probab=94.14  E-value=0.078  Score=31.60  Aligned_cols=34  Identities=15%  Similarity=0.236  Sum_probs=22.5

Q ss_pred             EEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHH
Q ss_conf             99952847899999999999987988999858568
Q gi|254780622|r    9 ALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSA   43 (405)
Q Consensus         9 llgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A   43 (405)
                      .++|||.-- |=.-.+++.|-++|+.|+...-...
T Consensus         8 ~VcVTGAsG-fIgswivk~LL~rGY~V~gtVR~~~   41 (327)
T KOG1502           8 KVCVTGASG-FIGSWIVKLLLSRGYTVRGTVRDPE   41 (327)
T ss_pred             EEEEECCCH-HHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf             799948820-8999999999868998999970863


No 220
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.14  E-value=0.24  Score=28.41  Aligned_cols=34  Identities=29%  Similarity=0.332  Sum_probs=23.6

Q ss_pred             CCCCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             988855699-99528478999999999999879889998
Q gi|254780622|r    1 MDLSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPV   38 (405)
Q Consensus         1 m~l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv   38 (405)
                      |+|+||+++ -|-+++|-    ..+++.|.+.|+.|..+
T Consensus         4 ~~l~gK~alITG~s~GIG----~aia~~la~~Ga~V~~~   38 (253)
T PRK08220          4 MDFSGKTVWVTGAAQGIG----YAVALAFVEAGAKVIGF   38 (253)
T ss_pred             CCCCCCEEEEECCCCHHH----HHHHHHHHHCCCEEEEE
T ss_conf             899999899958856899----99999999879999999


No 221
>PRK05693 short chain dehydrogenase; Provisional
Probab=93.96  E-value=0.31  Score=27.73  Aligned_cols=46  Identities=17%  Similarity=0.194  Sum_probs=29.4

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHHH-----HHHHHHHHCCCCEEEEE
Q ss_conf             79778984042010102135762157727889-----99999982588389984
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGH-----AIAKSLAYFGAEVILIS  239 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~-----~iA~~~~~~Ga~V~li~  239 (405)
                      .|.=|-|+|..-.-+.   -+.+-.+.-|-+.     +|+.|+...|-+|++|+
T Consensus       122 ~G~IVnisS~ag~~~~---p~~~~Y~aSK~Al~~~s~sLr~El~~~gI~V~~v~  172 (274)
T PRK05693        122 RGLVVNIGSVSGVLVT---PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQ  172 (274)
T ss_pred             CCEEEEEECCHHCCCC---CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             9679998140532689---99737999999999999999998420287899997


No 222
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=93.92  E-value=0.29  Score=27.96  Aligned_cols=40  Identities=28%  Similarity=0.423  Sum_probs=27.0

Q ss_pred             CCCCCCEEE-EEEEC--HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH
Q ss_conf             988855699-99528--47899999999999987988999858568630
Q gi|254780622|r    1 MDLSGKKIA-LIMCG--SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKF   46 (405)
Q Consensus         1 m~l~~k~Il-lgvtG--siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~f   46 (405)
                      +.|+|||+| .||--  |||    -.+++.|.++|+++  ++|...+++
T Consensus         2 g~L~GK~~lI~Gvan~rSIA----wGIAk~l~~~GAeL--~fTy~~e~l   44 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIA----WGIAKALAEQGAEL--AFTYQGERL   44 (259)
T ss_pred             CCCCCCEEEEEEECCCCCHH----HHHHHHHHHCCCEE--EEEECCHHH
T ss_conf             76678658999732662179----99999999759879--998435888


No 223
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=93.89  E-value=0.44  Score=26.75  Aligned_cols=187  Identities=20%  Similarity=0.215  Sum_probs=97.0

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCCCCC--EEEEEH---
Q ss_conf             0179778984042010102135762157727889999999825883899841566--------776567--467546---
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IADPPN--VMTIHV---  255 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~~~~--~~~i~v---  255 (405)
                      ...++++|||+                .|+--|.++|+.+.++|++|.|+.-...        +..-.+  +.++.+   
T Consensus         3 ~~~~~~~lITG----------------ASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs   66 (265)
T COG0300           3 PMKGKTALITG----------------ASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLS   66 (265)
T ss_pred             CCCCCEEEEEC----------------CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCC
T ss_conf             77786799977----------------88648999999999779979999676999999999998730862799977678


Q ss_pred             --HHHHHHHHHHHHC-CCCCEEEEEHHHHHHHHHHHHH-CCCCCCCCCCCCEEEE----EECHHHHHHHHHCCCCCCEEE
Q ss_conf             --5778999999850-5888799740444443222210-1123345577510455----218068988762148995899
Q gi|254780622|r  256 --ERAEDMLQEVLKA-LPVDIAVMVSAVSDWRFPKIAG-TKIKRKDIGDTMRIDL----MENPDILKIIGHHQCRPSIVV  327 (405)
Q Consensus       256 --~t~~em~~~~~~~-~~~D~~I~aAAVSDf~~~~~~~-~Kikk~s~~~~l~L~L----~~~pdIL~~i~~~k~~~~~lV  327 (405)
                        +....+.+.+... .+.|++|-+|-...|.+-...+ .+.     .+.+++.+    .-|.-++..+.++..=..+-|
T Consensus        67 ~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~-----~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI  141 (265)
T COG0300          67 DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEE-----EEMIQLNILALTRLTKAVLPGMVERGAGHIINI  141 (265)
T ss_pred             CHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHCCHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             836799999999824885238997787477665421885899-----999999999999999999999986589669998


Q ss_pred             -EEECCC---C------------HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHH
Q ss_conf             -981141---2------------389999999997499899992057767777766118999836985972789989999
Q gi|254780622|r  328 -GFAAET---Q------------CIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVA  391 (405)
Q Consensus       328 -GFkaET---~------------~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA  391 (405)
                       .+++..   .            ..-+-.+.-|..+|.+.-+.|+=.-...||..+....+....    ....++=..+|
T Consensus       142 ~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~----~~~~~~~~~va  217 (265)
T COG0300         142 GSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSP----GELVLSPEDVA  217 (265)
T ss_pred             ECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC----HHHCCCHHHHH
T ss_conf             43453288863279999999999999999998358984999996573335533344443211232----12306999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254780622|r  392 DRLCHLIVE  400 (405)
Q Consensus       392 ~~Il~~i~~  400 (405)
                      +.++..+..
T Consensus       218 ~~~~~~l~~  226 (265)
T COG0300         218 EAALKALEK  226 (265)
T ss_pred             HHHHHHHHC
T ss_conf             999999850


No 224
>KOG1371 consensus
Probab=93.85  E-value=0.23  Score=28.58  Aligned_cols=33  Identities=27%  Similarity=0.347  Sum_probs=17.1

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             556999952847899999999999987988999858
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      +++||  |||+- -|=.-+.+=+|.+.|.+|.+|=-
T Consensus         2 ~~~VL--VtGga-GyiGsht~l~L~~~gy~v~~vDN   34 (343)
T KOG1371           2 GKHVL--VTGGA-GYIGSHTVLALLKRGYGVVIVDN   34 (343)
T ss_pred             CCEEE--EECCC-CCEEHHHHHHHHHCCCCEEEEEC
T ss_conf             83799--96687-63105999999867981799824


No 225
>PRK10538 3-hydroxy acid dehydrogenase; Provisional
Probab=93.69  E-value=0.38  Score=27.15  Aligned_cols=63  Identities=19%  Similarity=0.172  Sum_probs=27.7

Q ss_pred             HHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE-----EHHHHHHHHHHHHHCC-CCCEEEEEHHHHH
Q ss_conf             889999999825883899841566------7765674675-----4657789999998505-8887997404444
Q gi|254780622|r  220 QGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI-----HVERAEDMLQEVLKAL-PVDIAVMVSAVSD  282 (405)
Q Consensus       220 ~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i-----~v~t~~em~~~~~~~~-~~D~~I~aAAVSD  282 (405)
                      .|.++|+.|...|++|.+..-...      .+....+..+     +....+++.+.+.+.+ ..|++|.+|.++.
T Consensus        12 IG~a~A~~la~~Ga~Vv~~~r~~~~l~~l~~~lg~~~~~~~~Dvsd~~~v~~~~~~~~~~~g~iDiLVnNAG~~~   86 (248)
T PRK10538         12 FGECITRRFIQNGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDILVNNAGLAL   86 (248)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf             999999999987999999989999999999984886799997348889999999999997099759997785467


No 226
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms.  Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent.  As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.65  E-value=0.59  Score=25.94  Aligned_cols=30  Identities=33%  Similarity=0.438  Sum_probs=13.4

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEE
Q ss_conf             8885569999528478999999999999879889
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVV   35 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V   35 (405)
                      +|+|||+.+-=.|.+.-+    +++.|.+.|+.|
T Consensus        20 ~l~g~~vaVqGfGnVG~~----~a~~l~~~Gakv   49 (217)
T cd05211          20 SLEGLTVAVQGLGNVGWG----LAKKLAEEGGKV   49 (217)
T ss_pred             CCCCCEEEEECCCHHHHH----HHHHHHHCCCEE
T ss_conf             857999999898899999----999999859989


No 227
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=93.59  E-value=0.42  Score=26.90  Aligned_cols=71  Identities=17%  Similarity=0.164  Sum_probs=44.1

Q ss_pred             EEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---CCCCEEEEE--HHHHHHHHHHHHHC
Q ss_conf             7898404201010213576215772788999999982588389984156677---656746754--65778999999850
Q gi|254780622|r  194 RALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---DPPNVMTIH--VERAEDMLQEVLKA  268 (405)
Q Consensus       194 ~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---~~~~~~~i~--v~t~~em~~~~~~~  268 (405)
                      +||||+|                |+=.|.++++.+..+|+++.+........   ...++..+.  +...++.. .+.+.
T Consensus         2 nVLITGa----------------s~GIG~aia~~l~~~~~~~~v~~~~~~~~~~~~~~~v~~~~~Dvt~~~~i~-~~~~~   64 (235)
T PRK09009          2 NILIVGG----------------SGGIGKAMVKQLLETYPDATVHATYRHHKPDFRHDNVQWHALDVTDEAEIK-QLSEQ   64 (235)
T ss_pred             EEEEECC----------------CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHH-HHHHH
T ss_conf             7999755----------------639999999999856998099997377654445798389987479999999-99987


Q ss_pred             C-CCCEEEEEHHHH
Q ss_conf             5-888799740444
Q gi|254780622|r  269 L-PVDIAVMVSAVS  281 (405)
Q Consensus       269 ~-~~D~~I~aAAVS  281 (405)
                      + ..|++|.+|.+-
T Consensus        65 ~~~iD~linnAGi~   78 (235)
T PRK09009         65 FTQLDWLINCVGML   78 (235)
T ss_pred             HCCCCEEEECCCCC
T ss_conf             08778999767524


No 228
>CHL00194 ycf39 Ycf39; Provisional
Probab=93.54  E-value=0.46  Score=26.65  Aligned_cols=204  Identities=14%  Similarity=0.133  Sum_probs=87.5

Q ss_pred             EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf             999952847899999999999987988999858568630698999997479758-2076788778774300114465578
Q gi|254780622|r    8 IALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVY-THLLSYKEGYESNHIQLANECDLLV   86 (405)
Q Consensus         8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~-~~~~~~~~~~~~~Hi~l~~~aD~~i   86 (405)
                      .++|-||-+-    -.++++|.+.|++|+++.-. ..+.   ..++.. |-++. -|+.+.+.   ..  ..-+-+|.++
T Consensus         4 LV~GATG~lG----r~vVr~Ll~~G~~Vr~lvRn-p~ka---~~l~~~-Gve~v~gDl~dpes---l~--~Al~GvdaVi   69 (319)
T CHL00194          4 LVIGATGTLG----RQIVRRALDEGYQVKCLVRN-LRKA---AFLKEW-GAELVYGDLSLPET---IP--PALEGITAII   69 (319)
T ss_pred             EEECCCCHHH----HHHHHHHHHCCCCEEEEECC-HHHH---HHHHHC-CCEEEEECCCCHHH---HH--HHHCCCCEEE
T ss_conf             9989985899----99999999688908999578-6763---234215-96799942788778---99--9965996799


Q ss_pred             EEECCHH----HHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHH-HHH--HHHHHHH-HHHHC--CCCCCCCHHH
Q ss_conf             8411188----89885202455214666752279968984056600000-388--9999999-86400--0134652125
Q gi|254780622|r   87 VAPASAN----FIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWA-KPA--TQRNVEI-LQKDG--CYFIGPESGA  156 (405)
Q Consensus        87 VaPaTaN----tiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~-~p~--~~~nl~~-L~~~g--~~vi~P~~g~  156 (405)
                      .+..+.-    ..-..-.--.-+++-+.-.+. =+.++..=+++..-+. .|.  .+...++ |++.|  +.|+-|.. .
T Consensus        70 ~~~~~~~~~~~~~~~vd~~g~~~li~AAk~aG-Vkr~V~lS~lga~~~~~~p~~~~K~~~E~~L~~Sgl~~TIlRPs~-F  147 (319)
T CHL00194         70 DASTSRPSDLNNAYQIDLEGKLALIEAAKAAK-VKRFIFFSILNAEQYPQVPLMKIKSDIEEKLKQSGINYTIFRLAG-F  147 (319)
T ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH-H
T ss_conf             94566778862088988988999999999849-988999613566668875677879999999986799859984739-9


Q ss_pred             HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-EECCEEEEECCCCCHHHHHHHHHHHHCCCC-
Q ss_conf             531032233343455899999998631013200179778984042010-102135762157727889999999825883-
Q gi|254780622|r  157 MAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-PLDPMRYIANRSSGQQGHAIAKSLAYFGAE-  234 (405)
Q Consensus       157 la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~-  234 (405)
                      +-              ..+....       ...+.+..|.+++|.++- ||         ++.=.+..++..+..-++. 
T Consensus       148 ~q--------------~l~~~~a-------~pi~~~~~v~~~~~~~~ia~I---------~~~DVA~~~a~aL~~~~~~g  197 (319)
T CHL00194        148 FQ--------------GLISQYA-------IPILDSQTIWITGESTPIAYI---------DTQDAAKFALKSLSLPETKN  197 (319)
T ss_pred             HH--------------HHHHHHH-------HHHHCCCCEEECCCCCCCCCC---------CHHHHHHHHHHHHCCCCCCC
T ss_conf             99--------------8899876-------776307857766998752887---------79999999999958977589


Q ss_pred             -EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCC
Q ss_conf             -89984156677656746754657789999998505
Q gi|254780622|r  235 -VILISGPVSIADPPNVMTIHVERAEDMLQEVLKAL  269 (405)
Q Consensus       235 -V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~  269 (405)
                       ..-+.||-            +-|..|+.+.+.+..
T Consensus       198 k~y~L~GP~------------a~T~~EIa~l~~~~~  221 (319)
T CHL00194        198 KTFPLVGPK------------SWNSSEIISLCEQLS  221 (319)
T ss_pred             CEEEEECCC------------CCCHHHHHHHHHHHH
T ss_conf             899954986------------389999999999985


No 229
>PRK08267 short chain dehydrogenase; Provisional
Probab=93.51  E-value=0.37  Score=27.26  Aligned_cols=19  Identities=32%  Similarity=0.169  Sum_probs=8.9

Q ss_pred             HHHHHHHHHHHCCCCEEEE
Q ss_conf             8899999998258838998
Q gi|254780622|r  220 QGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       220 ~G~~iA~~~~~~Ga~V~li  238 (405)
                      .|.++|+.+...|++|.+.
T Consensus        13 IG~a~A~~~a~~G~~V~~~   31 (258)
T PRK08267         13 IGRATARLFAARGWRVGAY   31 (258)
T ss_pred             HHHHHHHHHHHCCCEEEEE
T ss_conf             9999999999879999999


No 230
>pfam00208 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase.
Probab=93.50  E-value=0.27  Score=28.13  Aligned_cols=132  Identities=24%  Similarity=0.279  Sum_probs=68.9

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHC-----CHHHHHH---HHCCCCCCCCCCCCCCCCC
Q ss_conf             8885569999528478999999999999879889998585686306-----9899999---7479758207678877877
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFI-----TPLIVGA---ISNRRVYTHLLSYKEGYES   73 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi-----~~~~l~~---lt~~~v~~~~~~~~~~~~~   73 (405)
                      +|+|||+.+-=.|.+..+    .++.|.+.|+.|..| +++.--+.     ....+..   ..+. .+.+........-.
T Consensus        29 ~l~g~~v~IqGfGnVG~~----~a~~l~~~Gakvvav-sD~~G~i~~~~Gldi~~l~~~~~~~~~-~~~~~~~~~~~~i~  102 (237)
T pfam00208        29 SLEGKTVAVQGFGNVGSY----AAEKLLELGAKVVAV-SDSSGYIYDPNGIDIEELLELKEEGGG-RVVEYAGSGAEYIS  102 (237)
T ss_pred             CCCCCEEEEECCCHHHHH----HHHHHHHCCCEEEEE-ECCCCEEECCCCCCHHHHHHHHHHHCC-EEECCCCCCCEECC
T ss_conf             878999999898899999----999999879969999-828767999999999999999997198-43124665753448


Q ss_pred             CCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             43001144655788411188898852024552146667522799689840566000003889999999864000134652
Q gi|254780622|r   74 NHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPE  153 (405)
Q Consensus        74 ~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~  153 (405)
                      +.--+...+|+++-| |+-|.|..-            ....-++++++=.|      ++|.+.+..+.|++.|+.++ |.
T Consensus       103 ~~~~~~~~~DIliPa-A~~~~I~~~------------na~~i~ak~I~EgA------N~p~t~eA~~~L~~rgI~vi-PD  162 (237)
T pfam00208       103 GEELWEIDCDILVPC-ATQNEINEE------------NAKLIKAKAVVEGA------NMPTTPEADEILEERGILYA-PD  162 (237)
T ss_pred             CCCCCCCCCCEEEEC-CCCCCCCHH------------HHHHCCCCEEEECC------CCCCCHHHHHHHHHCCCEEE-CH
T ss_conf             710004766688644-556889989------------99862754897537------89889789999998899896-80


Q ss_pred             HHHHHHCC
Q ss_conf             12553103
Q gi|254780622|r  154 SGAMAESN  161 (405)
Q Consensus       154 ~g~la~c~  161 (405)
                      .  ++..|
T Consensus       163 ~--laNAG  168 (237)
T pfam00208       163 K--AANAG  168 (237)
T ss_pred             H--HHCCC
T ss_conf             7--75287


No 231
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.45  E-value=0.38  Score=27.20  Aligned_cols=36  Identities=31%  Similarity=0.386  Sum_probs=24.5

Q ss_pred             CCCCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             988855699-99528478999999999999879889998585
Q gi|254780622|r    1 MDLSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         1 m~l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      |+|+||||+ +|+.||-     .-.++.|.+.|++|.+.=..
T Consensus         1 m~~~~k~v~viGlG~sG-----~s~a~~L~~~G~~v~~~D~~   37 (445)
T PRK04308          1 MTFQNKKILVAGLGGTG-----ISMIAYLRKNGAEVAAYDAE   37 (445)
T ss_pred             CCCCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEECC
T ss_conf             99799989999989999-----99999999789919999799


No 232
>PRK06924 short chain dehydrogenase; Provisional
Probab=93.30  E-value=0.37  Score=27.24  Aligned_cols=44  Identities=18%  Similarity=0.154  Sum_probs=22.3

Q ss_pred             CEEEEEECCCHHEECCEEEEECCCCCHHHH-----HHHHHHHHCCCCEEEEE
Q ss_conf             778984042010102135762157727889-----99999982588389984
Q gi|254780622|r  193 KRALVTSGPTYEPLDPMRYIANRSSGQQGH-----AIAKSLAYFGAEVILIS  239 (405)
Q Consensus       193 k~vlITaG~T~E~ID~VR~ItN~SSGk~G~-----~iA~~~~~~Ga~V~li~  239 (405)
                      .=|.|+++....   |....+..++-|-|.     .+|.|+..++..|..++
T Consensus       135 ~IvnisS~a~~~---~~~~~~~Y~aSKaal~~ltk~lA~E~~~~~~~I~v~a  183 (251)
T PRK06924        135 RVINISSGAAKN---PYFGWSAYCSSKAGLNMFTQTVATEQEEEEYPVKIIA  183 (251)
T ss_pred             CEEEEEEHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             549997243258---9999769999999999999999998371599989999


No 233
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=93.05  E-value=0.73  Score=25.34  Aligned_cols=225  Identities=20%  Similarity=0.258  Sum_probs=103.2

Q ss_pred             EEEEEEECHH-----HHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCC-
Q ss_conf             6999952847-----8999999999999879889998585686306989999974797582--0767887787743001-
Q gi|254780622|r    7 KIALIMCGSV-----AVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYT--HLLSYKEGYESNHIQL-   78 (405)
Q Consensus         7 ~IllgvtGsi-----aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~--~~~~~~~~~~~~Hi~l-   78 (405)
                      ||++-+-||-     -.|++..|+++|++.|++|..+.+.....+....   ...+.+++.  +...+.+. ...-+++ 
T Consensus         2 kI~fr~d~~~~iG~GH~~RclaLA~~l~~~g~~v~f~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~   77 (280)
T TIGR03590         2 RILFRADASSEIGLGHVMRCLTLARELRKRGAEVAFACKTLPGDLIDLI---LSAGFPVYVLPDTSSWQDD-ALELINLL   77 (280)
T ss_pred             EEEEEEECCCCEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHH---HHCCCCEEECCCCCCCCCC-HHHHHHHH
T ss_conf             7999996789913208999999999999889949999927958899999---9759817981675652012-99999999


Q ss_pred             -CCCCCEEEEE--ECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCH-HH----H--HH-HHHHHHHHHHHHC-
Q ss_conf             -1446557884--1118889885202455214666752279968984056600-00----0--38-8999999986400-
Q gi|254780622|r   79 -ANECDLLVVA--PASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFM-MW----A--KP-ATQRNVEILQKDG-  146 (405)
Q Consensus        79 -~~~aD~~iVa--PaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~-M~----~--~p-~~~~nl~~L~~~g-  146 (405)
                       ...+|++|+=  -.+.....++.              ....++++.--++.. ++    -  +| ....+...+...+ 
T Consensus        78 ~~~~~d~vIiD~y~~~~~~~~~lk--------------~~~~~~i~iDD~~~~~~~~d~vin~~~~~~~~~y~~~~~~~~  143 (280)
T TIGR03590        78 EKEKFDILIVDHYALDADWEKLIK--------------HFGRKLLVIDDLADRPHDCDLLLDQNPGADALDYQGLVPANC  143 (280)
T ss_pred             HHCCCCEEEEECCCCCHHHHHHHH--------------HHCCEEEEEECCCCCCCCCCEEECCCCCCCHHHHCCCCCCCC
T ss_conf             737979999925999979999999--------------839839999367654656142541454447566364488676


Q ss_pred             CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHH
Q ss_conf             01346521255310322333434558999999986310132001797789840420101021357621577278899999
Q gi|254780622|r  147 CYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAK  226 (405)
Q Consensus       147 ~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~  226 (405)
                      ..+.+|++-            +..++ ... ...... .+   -.-++||||.|||    ||-.         ....+.+
T Consensus       144 ~~l~G~~Y~------------~lr~~-F~~-~~~~~~-~~---~~~~~Ili~~GGs----D~~~---------lt~~il~  192 (280)
T TIGR03590       144 RLLLGPSYA------------LLREE-FYQ-LRTANK-RR---KPLRRVLVSFGGA----DPDN---------LTLKLLS  192 (280)
T ss_pred             EEEECCCCC------------CCCHH-HHH-HHHHHH-CC---CCCCEEEEEECCC----CHHH---------HHHHHHH
T ss_conf             698657534------------35788-876-303221-03---6553289997787----7000---------8999999


Q ss_pred             HHHH--CCCCEEEEECCCCCCC---------CCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
Q ss_conf             9982--5883899841566776---------567467546577899999985058887997404444432
Q gi|254780622|r  227 SLAY--FGAEVILISGPVSIAD---------PPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRF  285 (405)
Q Consensus       227 ~~~~--~Ga~V~li~g~~~~~~---------~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~  285 (405)
                      .+..  ....+++|.|+.....         ..++..  ....++|.+.+.   .+|+.|.++..+=|-.
T Consensus       193 ~l~~~~~~~~i~vvig~~~~~~~~i~~~~~~~~~~~~--~~~~~~m~~~m~---~aDlaI~agG~t~~El  257 (280)
T TIGR03590       193 ALAESQINISITLVTGSSNPNLDELKKFAKEYPNIIL--FIDVENMAELMN---EADLAIGAAGSTSWER  257 (280)
T ss_pred             HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEE--ECCHHHHHHHHH---HCCEEEECCCHHHHHH
T ss_conf             9985166856799986798766999999972899699--659889999999---7799998596589999


No 234
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=93.03  E-value=0.74  Score=25.32  Aligned_cols=158  Identities=15%  Similarity=0.171  Sum_probs=76.2

Q ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98885569999528478999999999999879889998585686306989999974797582076788778774300114
Q gi|254780622|r    1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLAN   80 (405)
Q Consensus         1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~   80 (405)
                      ++|+||++|+.=.|.+|+.|+-.    |.+.|+.|+||--+-     ++...+......+ +-.   .......+  | .
T Consensus         6 l~l~gk~vLVVGGG~vA~rK~~~----Ll~~gA~VtVvsp~~-----~~el~~l~~~~~i-~~~---~~~~~~~d--l-~   69 (202)
T PRK06718          6 IDLSNKRVVIVGGGKVAGRRAIT----LLKYGAHITVISPEI-----TENLVKLVEEGKI-RWK---EKEFEPSD--I-V   69 (202)
T ss_pred             EECCCCEEEEECCCHHHHHHHHH----HHHCCCEEEEECCCC-----CHHHHHHHHCCCC-EEE---ECCCCHHH--H-C
T ss_conf             98289869998898999999999----986899699986999-----9899999976994-476---16788667--5-1


Q ss_pred             CCCEEEEEECCHHH-----HHHHH--C---CCCCCHHHHHHH--H-CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             46557884111888-----98852--0---245521466675--2-2799689840566000003889999999864000
Q gi|254780622|r   81 ECDLLVVAPASANF-----IAHVA--H---GMVYDLASAILL--A-KGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGC  147 (405)
Q Consensus        81 ~aD~~iVaPaTaNt-----iaK~A--~---GiaD~llt~~~l--a-~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~  147 (405)
                      .++++  ..||-|.     +++.+  +   -.+|++-.+.+.  + ..+-|+.++=+-+.   .+|+..+.++.--+.  
T Consensus        70 ~~~lV--iaAT~d~~~N~~i~~~~~~~~lvNvvD~p~~~dFi~Paiv~rg~l~IaIST~G---~SP~lAr~iR~~lE~--  142 (202)
T PRK06718         70 DAFLV--IAATNDPRVNEAVAEALPENALFNVIGDAESGNVVFPSALHRGKLTISVSTDG---ASPKLAKKIRDELEA--  142 (202)
T ss_pred             CCCEE--EECCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEEECCEEEEEECCC---CCHHHHHHHHHHHHH--
T ss_conf             67044--55279899999999986544875755786548278742785299899998899---783999999999998--


Q ss_pred             CCCCCCHHHHHH----CCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             134652125531----03223334345589999999863
Q gi|254780622|r  148 YFIGPESGAMAE----SNGYGVGRMSEPCDIIRQITWLL  182 (405)
Q Consensus       148 ~vi~P~~g~la~----c~~~G~grl~e~~~I~~~~~~~~  182 (405)
                       .+++.+|.+++    .=+.=+.+++++++=-....+.+
T Consensus       143 -~lp~~~~~~~~~~~~~R~~vk~~~~~~~~Rr~~~~~v~  180 (202)
T PRK06718        143 -LYDESYESYIDFLYECRQKIKELQIEKREKQILLQEVL  180 (202)
T ss_pred             -HCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             -73687999999999999999986799789999999994


No 235
>PRK07023 short chain dehydrogenase; Provisional
Probab=92.92  E-value=0.52  Score=26.27  Aligned_cols=20  Identities=35%  Similarity=0.391  Sum_probs=8.6

Q ss_pred             HHHHHHHHHHHCCCCEEEEE
Q ss_conf             88999999982588389984
Q gi|254780622|r  220 QGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       220 ~G~~iA~~~~~~Ga~V~li~  239 (405)
                      .|.++|+.+..+|++|.++.
T Consensus        13 IG~aiA~~la~~G~~Vi~~~   32 (243)
T PRK07023         13 LGAALAEQLLQPGIAVLGVS   32 (243)
T ss_pred             HHHHHHHHHHHCCCEEEEEE
T ss_conf             99999999998799999997


No 236
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=92.88  E-value=0.77  Score=25.19  Aligned_cols=157  Identities=23%  Similarity=0.263  Sum_probs=81.1

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88855699995284789999999999998798899985856863069899999747975820767887787743001144
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANE   81 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~   81 (405)
                      .|+||++|+.=+|++|.-|+-.    |-+.|++|+|+--+.     .|..-.+.-..++ ...   +.....     ...
T Consensus         9 ~l~~k~VlvvGgG~va~rKa~~----ll~~ga~v~Vvs~~~-----~~el~~~~~~~~i-~~~---~~~~~~-----~~~   70 (210)
T COG1648           9 DLEGKKVLVVGGGSVALRKARL----LLKAGADVTVVSPEF-----EPELKALIEEGKI-KWI---EREFDA-----EDL   70 (210)
T ss_pred             ECCCCEEEEECCCHHHHHHHHH----HHHCCCEEEEECCCC-----CHHHHHHHHHCCC-CHH---HCCCCH-----HHH
T ss_conf             8199779998998999999999----974699799987874-----4999999983485-310---022363-----653


Q ss_pred             CCEEEEEECCHH-----HHHHHHCC------CCCCHH-HHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             655788411188-----89885202------455214-6667--522799689840566000003889999999864000
Q gi|254780622|r   82 CDLLVVAPASAN-----FIAHVAHG------MVYDLA-SAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGC  147 (405)
Q Consensus        82 aD~~iVaPaTaN-----tiaK~A~G------iaD~ll-t~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~  147 (405)
                      .+.++|..||-|     -+.+.|.-      .+|++- +...  ....+.|+.++=+-+.   .+|..-+.+..--+   
T Consensus        71 ~~~~lviaAt~d~~ln~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G---~sP~la~~ir~~Ie---  144 (210)
T COG1648          71 DDAFLVIAATDDEELNERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTGG---KSPVLARLLREKIE---  144 (210)
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEECEEECCCCEEEEEECCC---CCHHHHHHHHHHHH---
T ss_conf             682499991699899999999999939935604884658566010543588799997799---77499999999999---


Q ss_pred             CCCCCCHHHHHH----CCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             134652125531----03223334345589999999863
Q gi|254780622|r  148 YFIGPESGAMAE----SNGYGVGRMSEPCDIIRQITWLL  182 (405)
Q Consensus       148 ~vi~P~~g~la~----c~~~G~grl~e~~~I~~~~~~~~  182 (405)
                      ..++|..|..+.    +-+.-++..++...--....+.+
T Consensus       145 ~~l~~~~~~~~~~~~~~R~~v~~~~~~~~~Rr~~~~~~~  183 (210)
T COG1648         145 ALLPPSLGEVAELAARLRERVKGSLPKGKERRRFWEKIF  183 (210)
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             975962469999999999998603676999999999997


No 237
>PRK08219 short chain dehydrogenase; Provisional
Probab=92.76  E-value=0.52  Score=26.31  Aligned_cols=78  Identities=23%  Similarity=0.226  Sum_probs=38.8

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC---CCCCEEEE--EHHHHHHHHHH
Q ss_conf             79778984042010102135762157727889999999825883899841566-77---65674675--46577899999
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA---DPPNVMTI--HVERAEDMLQE  264 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~---~~~~~~~i--~v~t~~em~~~  264 (405)
                      ..|.+|||+|                |+-.|.++|+++.+ |+.|.++.-... +.   ...+...+  .+...++..+.
T Consensus         2 ~mKvalITGa----------------s~GIG~aia~~la~-~g~vv~~~r~~~~l~~l~~~~~~~~~~~Dlt~~~~i~~~   64 (226)
T PRK08219          2 GMPTALITGA----------------SRGIGAAIARALAR-THTLLLAGRPSERLDAVAARLGATTWPADLTDPEAIAAA   64 (226)
T ss_pred             CCCEEEEECC----------------CHHHHHHHHHHHHH-CCCEEEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHH
T ss_conf             7899999284----------------64999999999996-998999989889999999970993786057999999999


Q ss_pred             HHHCCCCCEEEEEHHHHHHHH
Q ss_conf             985058887997404444432
Q gi|254780622|r  265 VLKALPVDIAVMVSAVSDWRF  285 (405)
Q Consensus       265 ~~~~~~~D~~I~aAAVSDf~~  285 (405)
                      +.+.-..|++|.+|.+..+.+
T Consensus        65 ~~~~~~iD~lVnnAG~~~~~~   85 (226)
T PRK08219         65 VEPLDRLDVLVHNAGVAELGP   85 (226)
T ss_pred             HHHCCCCCEEEECCCCCCCCC
T ss_conf             996599889998996899987


No 238
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase; InterPro: IPR013445    This entry contains CDP-glucose 4,6-dehydratases from a variety of Gram-negative and Gram-positive bacteria. Members are typically encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate CDP-D-glucose. This is used by the proteins in this entry to produce CDP-4-keto-6-deoxyglucose..
Probab=92.72  E-value=0.69  Score=25.48  Aligned_cols=34  Identities=35%  Similarity=0.451  Sum_probs=20.6

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             17977898404201010213576215772788999999982588389984
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~  239 (405)
                      |+|||||||+                =||-=|--|-.=|..+||+|.=.+
T Consensus         2 w~gKkVl~TG----------------HTGFKGSWL~lWL~~lGA~V~GYS   35 (361)
T TIGR02622         2 WQGKKVLITG----------------HTGFKGSWLSLWLLELGAEVAGYS   35 (361)
T ss_pred             CCCCEEEEEC----------------CCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf             5686789845----------------786425589999984796798971


No 239
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=92.72  E-value=0.44  Score=26.75  Aligned_cols=38  Identities=24%  Similarity=0.290  Sum_probs=19.8

Q ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             9888556999952847899999999999987988999858
Q gi|254780622|r    1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus         1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      |+-..|. -+.|||+-+=+ ..+.++.|.++|+.|...--
T Consensus         1 ~~~~~~~-TvvITGansGI-G~eta~~La~~ga~Vil~~R   38 (322)
T PRK07453          1 MSQDAKG-TVLITGASSGV-GLYAAKALAKRGWHVIMACR   38 (322)
T ss_pred             CCCCCCC-EEEEECCCCHH-HHHHHHHHHHCCCEEEEEEC
T ss_conf             9988998-39996888689-99999999978998999979


No 240
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=92.71  E-value=0.46  Score=26.66  Aligned_cols=105  Identities=25%  Similarity=0.260  Sum_probs=60.8

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----CCCCCEEEEEHHHHHHHHH
Q ss_conf             01797789840420101021357621577278899999998258838998415667-----7656746754657789999
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----ADPPNVMTIHVERAEDMLQ  263 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----~~~~~~~~i~v~t~~em~~  263 (405)
                      +|.+++|||-+                 +|.||...++++..+|+.-..|+..+..     ....+...+   ..+++.+
T Consensus       179 ~l~~~~vlviG-----------------aGem~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~~~~~~---~~~~l~~  238 (429)
T PRK00045        179 DLSGKKVLVIG-----------------AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGAEAI---PLEELPE  238 (429)
T ss_pred             CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEE---CHHHHHH
T ss_conf             81206599976-----------------748999999999855998499975867789999997598897---4999999


Q ss_pred             HHHHCCCCCEEEEEHHHHHHHHHHHHHCCC-CCCCCCCCCEEEEEECHHHHHHH
Q ss_conf             998505888799740444443222210112-33455775104552180689887
Q gi|254780622|r  264 EVLKALPVDIAVMVSAVSDWRFPKIAGTKI-KRKDIGDTMRIDLMENPDILKII  316 (405)
Q Consensus       264 ~~~~~~~~D~~I~aAAVSDf~~~~~~~~Ki-kk~s~~~~l~L~L~~~pdIL~~i  316 (405)
                      .+.   .+|++|.|..-..|.+....-.+. ++......+-+.|---.||=..+
T Consensus       239 ~l~---~~DvvisaT~s~~~ii~~~~~~~~~~~r~~~~~~iiDLavPRdidp~v  289 (429)
T PRK00045        239 ALA---EADIVISSTAAPHPIITKGMVERALKQRRHRPLLLIDLAVPRDIEPEV  289 (429)
T ss_pred             HHH---HCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH
T ss_conf             996---589999944899750279999999873469956999616887774434


No 241
>PRK07846 mycothione/glutathione reductase; Reviewed
Probab=92.62  E-value=0.14  Score=29.95  Aligned_cols=77  Identities=13%  Similarity=0.182  Sum_probs=57.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH-----HEECCEEEEECCC---------------CCHHH
Q ss_conf             223334345589999999863101320017977898404201-----0102135762157---------------72788
Q gi|254780622|r  162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY-----EPLDPMRYIANRS---------------SGQQG  221 (405)
Q Consensus       162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~-----E~ID~VR~ItN~S---------------SGk~G  221 (405)
                      -.|.+|+.++..+.-...     .....+..++++|-.|.+-     ...|..|++|+..               .|-.|
T Consensus       106 i~G~a~f~~~~~v~v~~~-----~~~~~i~a~~iiIATGS~P~~p~~~g~~~~~~~ts~~~l~l~~lP~~~~IIGgG~ig  180 (453)
T PRK07846        106 YRGHARFVDADGLYTLRT-----GDGEEITADQIVIAAGSRPVIPPAIADSGVRYHTSDTIMRLPELPESLVIVGGGFIA  180 (453)
T ss_pred             EEEEEEECCCCEEEECCC-----CCCEEEEECEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCEEEEECCCHHH
T ss_conf             984899915986786137-----984699816499902887778998665787798664300154388649998997579


Q ss_pred             HHHHHHHHHCCCCEEEEECCCC
Q ss_conf             9999999825883899841566
Q gi|254780622|r  222 HAIAKSLAYFGAEVILISGPVS  243 (405)
Q Consensus       222 ~~iA~~~~~~Ga~V~li~g~~~  243 (405)
                      .++|..+...|.+||+|...-.
T Consensus       181 ~E~A~~~~~lG~~Vtli~~~~~  202 (453)
T PRK07846        181 AEFAHVFSALGVRVTVVNRSDR  202 (453)
T ss_pred             HHHHHHHHHHCCEEEEEEECCC
T ss_conf             9999999952992689974653


No 242
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=92.55  E-value=0.85  Score=24.91  Aligned_cols=153  Identities=18%  Similarity=0.234  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH--------EECCEEEEECCCCCHHHHHH----HHHHHHCCCCEEEEE
Q ss_conf             899999998631013200179778984042010--------10213576215772788999----999982588389984
Q gi|254780622|r  172 CDIIRQITWLLYKSKELLLKGKRALVTSGPTYE--------PLDPMRYIANRSSGQQGHAI----AKSLAYFGAEVILIS  239 (405)
Q Consensus       172 ~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E--------~ID~VR~ItN~SSGk~G~~i----A~~~~~~Ga~V~li~  239 (405)
                      ..++..+...+        ....++++-+|+..        .=+|-||+++.+-|-||+.+    .-.+...+..|.+|.
T Consensus       355 ~~~~~~l~~~~--------p~d~iv~~D~G~~~~~~~~~~~~~~p~~~~~~~g~G~mG~glpaAiGA~lA~p~r~Vv~i~  426 (548)
T PRK08978        355 PALLKQLSERK--------PADTVVTTDVGQHQMWVAQHMRFTRPENFITSAGLGTMGFGLPAAIGAQVARPDDTVICVS  426 (548)
T ss_pred             HHHHHHHHHHC--------CCCEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             99999999768--------9980999769950788877423679981422787776553588999988748999889998


Q ss_pred             CCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCC-CCCCCCCCCEEEEEECHHHHHHHHH
Q ss_conf             156677656746754657789999998505888799740444443222210112-3345577510455218068988762
Q gi|254780622|r  240 GPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKI-KRKDIGDTMRIDLMENPDILKIIGH  318 (405)
Q Consensus       240 g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Ki-kk~s~~~~l~L~L~~~pdIL~~i~~  318 (405)
                      |-.+.          --+.+|+..++...++.-++|+.=.--.. +.+.++... .+.+     ...|..+||.-+. .+
T Consensus       427 GDGsf----------~m~~~EL~Ta~r~~lpv~ivV~NN~~~g~-ir~~q~~~~~~~~~-----~~~l~~~pdf~~l-A~  489 (548)
T PRK08978        427 GDGSF----------MMNVQELGTIKRKQLPVKIVLLDNQRLGM-VRQWQQLFFDERYS-----ETDLSDNPDFVML-AS  489 (548)
T ss_pred             CCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCCHHH-HHHHHHHHCCCCCC-----CCCCCCCCCHHHH-HH
T ss_conf             95076----------45299999999958995899996884078-99999976289877-----6777899899999-99


Q ss_pred             CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             14899589998114123899999999974998999
Q gi|254780622|r  319 HQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIV  353 (405)
Q Consensus       319 ~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IV  353 (405)
                      --.    +-|+..++.+-++.|.++..+.+-=.+|
T Consensus       490 a~G----~~g~rV~~~~el~~al~~al~~~~P~lI  520 (548)
T PRK08978        490 AFG----IPGQTITRKDQVEAALDTLLNSEGPYLL  520 (548)
T ss_pred             HCC----CEEEEECCHHHHHHHHHHHHHCCCCEEE
T ss_conf             779----9799969999999999999818996999


No 243
>PRK01747 mnmC 5-methylaminomethyl-2-thiouridine methyltransferase; Reviewed
Probab=92.53  E-value=0.73  Score=25.35  Aligned_cols=98  Identities=27%  Similarity=0.277  Sum_probs=50.6

Q ss_pred             EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH-H----HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf             8405660000038899999998640001346521-2----5531032233343455899999998631013200179778
Q gi|254780622|r  121 IAPAMNFMMWAKPATQRNVEILQKDGCYFIGPES-G----AMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRA  195 (405)
Q Consensus       121 iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~-g----~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~v  195 (405)
                      ++|+-|..||. |-+-+++..|.+.|-.+..-.. |    .|..+|=+ .-|.                  + -+.+|+=
T Consensus       170 F~P~~np~mW~-~~~~~~~~~~~~~~~~~~T~taag~Vrr~L~~~GF~-v~k~------------------~-G~~~Kre  228 (660)
T PRK01747        170 FAPAKNPDMWS-PNLFNALARLARPGATLATFTSAGFVRRGLQEAGFT-VKKV------------------K-GFGRKRE  228 (660)
T ss_pred             CCCCCCCCCCC-HHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCE-EEEC------------------C-CCCCCCC
T ss_conf             78555823068-899999999728997588630458999999978966-9866------------------7-7887440


Q ss_pred             EEEEC---CCHH-----------EECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             98404---2010-----------10213576215772788999999982588389984
Q gi|254780622|r  196 LVTSG---PTYE-----------PLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       196 lITaG---~T~E-----------~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~  239 (405)
                      .+.+=   .+..           +.-+.|-+.=--.|-.|.++|.++.+||.+||++-
T Consensus       229 ml~g~~~~~~~~~~~~~w~~~~~~~~~~~~VaVIGAGIAGas~A~~LA~rG~~VtVlD  286 (660)
T PRK01747        229 MLVGVLEQSLPPPLAAPWFARPHSSKRNRDAAIIGGGIAGAALALALARRGWQVTLYE  286 (660)
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             3687716776777788642466655788718998938999999999997899689994


No 244
>pfam00582 Usp Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.
Probab=92.16  E-value=0.95  Score=24.60  Aligned_cols=114  Identities=18%  Similarity=0.194  Sum_probs=55.4

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHH-HHCCCEEEEEECHHHHHH--CC-------HHHH----HH----------HHCCCCC
Q ss_conf             56999952847899999999999-987988999858568630--69-------8999----99----------7479758
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRL-RERGAVVIPVMTKSAQKF--IT-------PLIV----GA----------ISNRRVY   61 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L-~~~g~~V~vv~T~~A~~f--i~-------~~~l----~~----------lt~~~v~   61 (405)
                      ||||+++-||-.+.++.+.+-.+ ++.|+++.++---....+  ..       ....    +.          ..+..+.
T Consensus         3 k~Ilv~vD~s~~s~~al~~A~~~a~~~~~~l~llhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (140)
T pfam00582         3 KRILVAVDGSEESERALEWALELAKRRGAELILLHVIDPEPSGAASEALEEEEEEELEEEEAEAEALAEAAAEAGGVVVE   82 (140)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             84999985999999999999999986499799999962887554443330357999999999999999998635798679


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEC
Q ss_conf             20767887787743001144655788411188898852024552146667522799689840
Q gi|254780622|r   62 THLLSYKEGYESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAP  123 (405)
Q Consensus        62 ~~~~~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaP  123 (405)
                      ...........+....-...+|++|+..-..+.+.++-.|=.    +.-++-.+.+||++++
T Consensus        83 ~~~~~g~~~~~I~~~~~~~~~dliV~G~~~~~~~~~~~~Gs~----s~~v~~~~~~pVlvvk  140 (140)
T pfam00582        83 VVVRGGDPAEAILEVAEEEDADLIVMGSRGRSGLRRLLLGSV----AEKVLRHAPCPVLVVR  140 (140)
T ss_pred             EEEEEECHHHHHCEEECCCCCCEEEEECCCCCCCCCCCCCHH----HHHHHHCCCCCEEEEC
T ss_conf             999960703642100005678889992899986446501739----9999954899899969


No 245
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated
Probab=92.12  E-value=0.96  Score=24.57  Aligned_cols=177  Identities=14%  Similarity=0.193  Sum_probs=101.8

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHE--------ECCEEEEECCCCCHHHHHHH----HHHHHCCCCE
Q ss_conf             34558999999986310132001797789840420101--------02135762157727889999----9998258838
Q gi|254780622|r  168 MSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEP--------LDPMRYIANRSSGQQGHAIA----KSLAYFGAEV  235 (405)
Q Consensus       168 l~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~--------ID~VR~ItN~SSGk~G~~iA----~~~~~~Ga~V  235 (405)
                      ...|..++..+.+.+.        ...++++.+|+...        -.|-+|++..+.|-||+.+.    -.+...+..|
T Consensus       397 ~i~p~~v~~~l~~~l~--------~d~ivv~d~G~~~~w~~~~~~~~~p~~~l~s~~~GsmG~glPaAiGA~lA~P~r~V  468 (612)
T PRK07789        397 SLAPQYVIERLGEIAG--------PDAIYVAGVGQHQMWAAQFIDYEKPRTWLNSGGLGTMGYAVPAAMGAKVGRPDKEV  468 (612)
T ss_pred             CCCHHHHHHHHHHHCC--------CCCEEEECCCCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCE
T ss_conf             7399999999998669--------99779978985156788760013898341687654488899999999986899938


Q ss_pred             EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEH----HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH
Q ss_conf             9984156677656746754657789999998505888799740----444443222210112334557751045521806
Q gi|254780622|r  236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVS----AVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD  311 (405)
Q Consensus       236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aA----AVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd  311 (405)
                      .+|.|-.+.          --|.+|+..++...++.-++|+.=    .+..+.- ....+..   ... .+.-.....||
T Consensus       469 v~i~GDGsf----------~mt~qEL~Tavr~~lpi~ivV~NN~~yg~Ir~~Q~-~~~~~~~---~~~-~~~~~~~~~PD  533 (612)
T PRK07789        469 WAIDGDGCF----------QMTNQELATCAIEGIPIKVALINNGNLGMVRQWQT-LFYEERY---SNT-DLNTGSHRIPD  533 (612)
T ss_pred             EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH-HHCCCCC---CCC-CCCCCCCCCCC
T ss_conf             999853686----------33299999999968994899996883068999999-8708875---655-46768788989


Q ss_pred             HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH-CCCCEEEEECCCCC-----CCCCCCCCEEEE
Q ss_conf             89887621489958999811412389999999997-49989999205776-----777776611899
Q gi|254780622|r  312 ILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLN-KGADFIVSNCILPD-----TGFVGKEWNKVS  372 (405)
Q Consensus       312 IL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~-K~~D~IVAN~i~~~-----~~~fgsd~n~v~  372 (405)
                      .-+. .+-  ..  +-|+..++.+-++.|.++..+ +..=.+|-=.|+++     ...+|...++.+
T Consensus       534 f~~l-A~a--~G--~~g~rv~~~~el~~al~~Al~~~d~P~lIdv~vdp~~~~~P~~~~g~~~~~~~  595 (612)
T PRK07789        534 FVKL-AEA--LG--CVGLRCEREEDVDAVIEKARAINDRPVVIDFVVGADAMVWPMVAAGTSNDEIQ  595 (612)
T ss_pred             HHHH-HHH--CC--CEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHC
T ss_conf             9999-997--79--87999799999999999998559995899999898877069889998989970


No 246
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=92.10  E-value=0.2  Score=28.99  Aligned_cols=75  Identities=16%  Similarity=0.208  Sum_probs=52.7

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH-----HEECCEEEEECC---------------CCCHHHH
Q ss_conf             23334345589999999863101320017977898404201-----010213576215---------------7727889
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY-----EPLDPMRYIANR---------------SSGQQGH  222 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~-----E~ID~VR~ItN~---------------SSGk~G~  222 (405)
                      .|.|++.++..+.-.-    ..+...-+..++++|-.|.+-     .+.|..+++++.               -.|-.|.
T Consensus       112 ~G~a~f~~~~~v~v~~----~~g~~~~l~a~~ivIATGs~p~~~p~~~~~~~~~~ts~~~l~l~~~P~~v~IiGgG~ig~  187 (472)
T PRK06467        112 NGLGKFTGGNTVEVTG----EDGKTEVIEFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPKRLLVMGGGIIGL  187 (472)
T ss_pred             CCCEEECCCCEEEEEC----CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCEEEEECCCHHHH
T ss_conf             1506754898036433----888648998779999469966568998878875882366511013995599995647289


Q ss_pred             HHHHHHHHCCCCEEEEECC
Q ss_conf             9999998258838998415
Q gi|254780622|r  223 AIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~g~  241 (405)
                      ++|..+.+.|.+||+|+-.
T Consensus       188 E~A~~~~~lG~~Vtli~~~  206 (472)
T PRK06467        188 EMGTVYHRLGSEVDVVEMF  206 (472)
T ss_pred             HHHHHHHHCCCEEEEEEEC
T ss_conf             9999998529868999604


No 247
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=92.05  E-value=0.29  Score=27.96  Aligned_cols=74  Identities=20%  Similarity=0.347  Sum_probs=55.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECC---------------CCCHHHH
Q ss_conf             233343455899999998631013200179778984042010-----10213576215---------------7727889
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANR---------------SSGQQGH  222 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~---------------SSGk~G~  222 (405)
                      .|.||+.++..+.-...    .+.+..+..++++|-.|.+.-     ++|..|++|+.               ..|-.|.
T Consensus       112 ~G~a~f~~~~~v~V~~~----~g~~~~i~a~~iiIATGs~P~~~pg~~~d~~~~~ts~~~~~l~~lPk~l~iiGgG~ig~  187 (466)
T PRK06115        112 KGWGRLDGVGKVVVKAE----DGSETQLEAKDIVIATGSEPTPLPGVTIDNQRIIDSTGALSLPEVPKHLVVIGAGVIGL  187 (466)
T ss_pred             EEEEEEECCCCEEEECC----CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCEEEEECCCHHHH
T ss_conf             52599954994189858----99779999568999989987699975659956971524003544896799995858999


Q ss_pred             HHHHHHHHCCCCEEEEEC
Q ss_conf             999999825883899841
Q gi|254780622|r  223 AIAKSLAYFGAEVILISG  240 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~g  240 (405)
                      ++|..+...|.+||+|.-
T Consensus       188 E~A~~~~~lG~~Vtlv~~  205 (466)
T PRK06115        188 ELGSVWRRLGAQVTVVEY  205 (466)
T ss_pred             HHHHHHHHCCCEEEEEEE
T ss_conf             999999861984789983


No 248
>PRK07282 acetolactate synthase catalytic subunit; Reviewed
Probab=92.02  E-value=0.99  Score=24.50  Aligned_cols=148  Identities=16%  Similarity=0.213  Sum_probs=82.5

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH--------EECCEEEEECCCCCHHHHHH----HHHHHHCCCC
Q ss_conf             43455899999998631013200179778984042010--------10213576215772788999----9999825883
Q gi|254780622|r  167 RMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE--------PLDPMRYIANRSSGQQGHAI----AKSLAYFGAE  234 (405)
Q Consensus       167 rl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E--------~ID~VR~ItN~SSGk~G~~i----A~~~~~~Ga~  234 (405)
                      +...|..++..+...+        .+.-++++-+|+..        .-+|-|+++..+-|-||+++    +-.+...+-.
T Consensus       367 ~~i~p~~~~~~l~~~~--------~~d~ivv~D~G~~~~~~~~~~~~~~~~~~~~~~~~g~mG~glpaAiGA~lA~p~r~  438 (566)
T PRK07282        367 RVVQPQAVIERIGELT--------NGDAIVVTDVGQHQMWAAQYYPYQNERQLVTSGGLGTMGFGIPAAIGAKIANPDKE  438 (566)
T ss_pred             CCCCHHHHHHHHHHHC--------CCCCEEEEECCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf             6769999999999767--------99978998087268999985677899732158987776661289999998289996


Q ss_pred             EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEE----HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH
Q ss_conf             8998415667765674675465778999999850588879974----044444322221011233455775104552180
Q gi|254780622|r  235 VILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMV----SAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP  310 (405)
Q Consensus       235 V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~a----AAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p  310 (405)
                      |.+|.|-.+.          --+.+|+..++...++.-++|+.    ..+..+.- ...++..   ..     -.+..+|
T Consensus       439 Vv~i~GDG~f----------~m~~qEL~Ta~~~~lpv~ivV~NN~~yg~i~~~q~-~~~~~~~---~~-----~~~~~~p  499 (566)
T PRK07282        439 VILFVGDGGF----------QMTNQELAILNIYKVPIKVVMLNNHSLGMVRQWQE-SFYEGRT---SE-----SVFDTLP  499 (566)
T ss_pred             EEEEECCCHH----------HCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH-HHCCCCC---CC-----CCCCCCC
T ss_conf             8999668055----------41489999999958996899996883069999999-8608976---76-----5668999


Q ss_pred             HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH
Q ss_conf             689887621489958999811412389999999997
Q gi|254780622|r  311 DILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLN  346 (405)
Q Consensus       311 dIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~  346 (405)
                      |.-+ +.+--.    +-||..|+.+-++.|.+-+..
T Consensus       500 df~~-iA~a~G----~~~~rv~~~~eL~~aLea~~~  530 (566)
T PRK07282        500 DFQL-MAQAYG----IKHYKFDNPETLAQDLEVITE  530 (566)
T ss_pred             CHHH-HHHHCC----CEEEEECCHHHHHHHHHHHCC
T ss_conf             9999-999779----879998999999999998778


No 249
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=91.96  E-value=0.83  Score=24.97  Aligned_cols=73  Identities=25%  Similarity=0.298  Sum_probs=40.1

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCC---CEEEEEHH---HHHHHHHHHHHCC-CCCEEE
Q ss_conf             35762157727889999999825883899841566------77656---74675465---7789999998505-888799
Q gi|254780622|r  209 MRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPP---NVMTIHVE---RAEDMLQEVLKAL-PVDIAV  275 (405)
Q Consensus       209 VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~---~~~~i~v~---t~~em~~~~~~~~-~~D~~I  275 (405)
                      |=.||-.||| -|.++|+++...|++|.+..-...      .+...   ......|.   +.+.+.+...+.+ +.|++|
T Consensus         8 v~lITGASSG-iG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLv   86 (246)
T COG4221           8 VALITGASSG-IGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILV   86 (246)
T ss_pred             EEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             8999468656-889999999978996999863688999999862567437896136788999999999997517605899


Q ss_pred             EEHHHHH
Q ss_conf             7404444
Q gi|254780622|r  276 MVSAVSD  282 (405)
Q Consensus       276 ~aAAVSD  282 (405)
                      ..|-++=
T Consensus        87 NNAGl~~   93 (246)
T COG4221          87 NNAGLAL   93 (246)
T ss_pred             ECCCCCC
T ss_conf             6687776


No 250
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed
Probab=91.92  E-value=0.29  Score=27.92  Aligned_cols=74  Identities=23%  Similarity=0.341  Sum_probs=52.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECC---------------CCCHHHH
Q ss_conf             233343455899999998631013200179778984042010-----10213576215---------------7727889
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANR---------------SSGQQGH  222 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~---------------SSGk~G~  222 (405)
                      .|.|++.++..+.-..     ....+.+..++++|-.|...-     .+|..|++|+.               -.|-.|.
T Consensus       111 ~G~a~f~~~~~v~V~~-----~~~~~~~~a~~iIIATGs~P~~~pg~~~~~~~v~ts~~~~~l~~lPk~v~IiGgG~ig~  185 (462)
T PRK06416        111 RGEAKLVDPNTVRVKG-----EDGEQTYTAKNIILATGSRPRELPGIEFDGKRVITSDEALNLDEVPKSLVVIGGGYIGI  185 (462)
T ss_pred             EEEEEEECCCEEEEEE-----CCCCEEEEECEEEECCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCEEEEECCCHHHH
T ss_conf             8389981276045553-----69966999486999989988779997878955984166457654797699988978788


Q ss_pred             HHHHHHHHCCCCEEEEECC
Q ss_conf             9999998258838998415
Q gi|254780622|r  223 AIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~g~  241 (405)
                      ++|..+...|.+||+|...
T Consensus       186 E~A~~~~~lG~~Vtli~~~  204 (462)
T PRK06416        186 EFASAYASLGAEVTIIEAL  204 (462)
T ss_pred             HHHHHHHHHCCEEEEEECC
T ss_conf             9999999739768997405


No 251
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=91.90  E-value=0.93  Score=24.67  Aligned_cols=17  Identities=35%  Similarity=0.657  Sum_probs=8.6

Q ss_pred             CCCHHHHHHHHHHHHCC
Q ss_conf             77278899999998258
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFG  232 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~G  232 (405)
                      |+|..|.+|.+++..+|
T Consensus         8 a~GqLG~~l~~~l~~~~   24 (299)
T PRK09987          8 KTGQVGWELQRALAPLG   24 (299)
T ss_pred             CCCHHHHHHHHHHHHCC
T ss_conf             99978999999866509


No 252
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=91.66  E-value=0.37  Score=27.23  Aligned_cols=76  Identities=22%  Similarity=0.242  Sum_probs=45.8

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-------CC-CCCEEEEEHHHHHH
Q ss_conf             01797789840420101021357621577278899999998258838998415667-------76-56746754657789
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-------AD-PPNVMTIHVERAED  260 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-------~~-~~~~~~i~v~t~~e  260 (405)
                      +|+|+++||-+                 .|.||..+++++..+|+.-.++.+.+..       .. ...+..+.   .++
T Consensus         9 ~l~~~~vlVIG-----------------aG~~~~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~~~~~~~~~---~~~   68 (134)
T pfam01488         9 DLKGKKVLLIG-----------------AGEMARLAAKHLLSKGAKKITIANRTLEKAKELAEEFGGEEVEALP---LDE   68 (134)
T ss_pred             CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEE---CHH
T ss_conf             81489899999-----------------6099999999999759988999547578999999984997258985---135


Q ss_pred             HHHHHHHCCCCCEEEEEHHHHHHHHHH
Q ss_conf             999998505888799740444443222
Q gi|254780622|r  261 MLQEVLKALPVDIAVMVSAVSDWRFPK  287 (405)
Q Consensus       261 m~~~~~~~~~~D~~I~aAAVSDf~~~~  287 (405)
                      +.+.+.   ++|++|.|.+...|.+.+
T Consensus        69 l~~~l~---~~DivI~aT~s~~~ii~~   92 (134)
T pfam01488        69 LEELLA---EADIVISATSAPTPIITK   92 (134)
T ss_pred             HHHHHH---HCCEEEEECCCCCCEECH
T ss_conf             441363---199999925999736489


No 253
>pfam02882 THF_DHG_CYH_C Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain.
Probab=91.58  E-value=0.99  Score=24.49  Aligned_cols=74  Identities=22%  Similarity=0.241  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE
Q ss_conf             58999999986310132001797789840420101021357621577278899999998258838998415667765674
Q gi|254780622|r  171 PCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNV  250 (405)
Q Consensus       171 ~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~  250 (405)
                      |..|++-+.++     .-+++||+++|-+-                |..-|.-||.-+..+||.||..|..+.       
T Consensus        20 p~ai~~lL~~~-----~i~l~Gk~vvViGr----------------S~iVG~Pla~lL~~~~atVtichs~T~-------   71 (159)
T pfam02882        20 PRGIMELLKRY-----GIDLAGKNVVVIGR----------------SNIVGKPLALLLLNANATVTVCHSKTK-------   71 (159)
T ss_pred             HHHHHHHHHHC-----CCCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCC-------
T ss_conf             99999999983-----99857866999888----------------731489999999877998999818999-------


Q ss_pred             EEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
Q ss_conf             6754657789999998505888799740444443
Q gi|254780622|r  251 MTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWR  284 (405)
Q Consensus       251 ~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~  284 (405)
                               ++.+.   ..++|++|.|+-...|-
T Consensus        72 ---------nl~~~---~~~ADIvI~A~G~p~~i   93 (159)
T pfam02882        72 ---------DLAEI---TREADIVVVAVGKPGLI   93 (159)
T ss_pred             ---------CHHHH---HHCCCEEEEECCCCCCC
T ss_conf             ---------97896---30034442315885505


No 254
>KOG4169 consensus
Probab=91.57  E-value=0.91  Score=24.71  Aligned_cols=79  Identities=32%  Similarity=0.425  Sum_probs=53.4

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC----------CCCCCCCEEEEE--HH
Q ss_conf             017977898404201010213576215772788999999982588389984156----------677656746754--65
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV----------SIADPPNVMTIH--VE  256 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~----------~~~~~~~~~~i~--v~  256 (405)
                      +|.||++++|+|.                |--|.+.++++..+|+.|..|--..          ...++..+-.++  |.
T Consensus         2 ~~tGKna~vtgga----------------gGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt   65 (261)
T KOG4169           2 DLTGKNALVTGGA----------------GGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVT   65 (261)
T ss_pred             CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCHHEEEHHHHHCHHHHHHHHCCCCCCEEEEEEECCC
T ss_conf             4137458996378----------------636699999999767154061040147899998860399843999980120


Q ss_pred             HHHH---HHHHHHHCCC-CCEEEEEHHHHHH
Q ss_conf             7789---9999985058-8879974044444
Q gi|254780622|r  257 RAED---MLQEVLKALP-VDIAVMVSAVSDW  283 (405)
Q Consensus       257 t~~e---m~~~~~~~~~-~D~~I~aAAVSDf  283 (405)
                      .-.|   .++++...+. .|++|-.|-|+|=
T Consensus        66 ~~~~~~~~f~ki~~~fg~iDIlINgAGi~~d   96 (261)
T KOG4169          66 NRGDLEAAFDKILATFGTIDILINGAGILDD   96 (261)
T ss_pred             CHHHHHHHHHHHHHHHCCEEEEECCCCCCCC
T ss_conf             0788999999999870945799716644461


No 255
>PRK07069 short chain dehydrogenase; Validated
Probab=91.55  E-value=0.52  Score=26.26  Aligned_cols=99  Identities=20%  Similarity=0.223  Sum_probs=54.0

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCC---------C--CCCCC-E-----EEEEHHHHHHHHHHHHHCCC-CCEEEEEH
Q ss_conf             727889999999825883899841566---------7--76567-4-----67546577899999985058-88799740
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILISGPVS---------I--ADPPN-V-----MTIHVERAEDMLQEVLKALP-VDIAVMVS  278 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li~g~~~---------~--~~~~~-~-----~~i~v~t~~em~~~~~~~~~-~D~~I~aA  278 (405)
                      |+-.|.++|+.+...||+|.+..-...         +  ..... .     .+.+-+..+.+.+.+.+.+. .|++|.+|
T Consensus         8 s~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDilVNnA   87 (251)
T PRK07069          8 AGGLGRAIARRMAEQGARVFLTDINDAAALDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNA   87 (251)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             78899999999998699999996894358999999998615996399995779999999999999999829998999899


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH----HHHHHHHHC
Q ss_conf             44444322221011233455775104552180----689887621
Q gi|254780622|r  279 AVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP----DILKIIGHH  319 (405)
Q Consensus       279 AVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p----dIL~~i~~~  319 (405)
                      ++....+..    .+.-+.+...+.+.|.-.-    -.+..+.++
T Consensus        88 Gi~~~~~~~----~~~~~~w~~~~~vNl~g~f~~~~~~~p~m~~~  128 (251)
T PRK07069         88 GVGSFGAIE----QIELDEWRRVMAINVESIVLGCKHALPYLRAS  128 (251)
T ss_pred             CCCCCCCCH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             999999903----49999999999999789999999999999966


No 256
>pfam03446 NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase. The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold.
Probab=91.50  E-value=0.93  Score=24.65  Aligned_cols=22  Identities=27%  Similarity=0.289  Sum_probs=15.3

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             7278899999998258838998
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li  238 (405)
                      -|.||..+|+.+.+.|++|...
T Consensus         9 lG~MG~~ma~~L~~~g~~v~v~   30 (163)
T pfam03446         9 LGVMGSPMALNLLKAGYTVTVY   30 (163)
T ss_pred             EHHHHHHHHHHHHHCCCEEEEE
T ss_conf             6798999999999779969999


No 257
>PRK06370 mercuric reductase; Validated
Probab=91.49  E-value=0.22  Score=28.67  Aligned_cols=70  Identities=27%  Similarity=0.472  Sum_probs=51.7

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECC---------------CCCHHHH
Q ss_conf             233343455899999998631013200179778984042010-----10213576215---------------7727889
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANR---------------SSGQQGH  222 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~---------------SSGk~G~  222 (405)
                      .|.|++.++..+.-         ....+..++++|-.|.+.-     -+|.++|+|+.               -.|-.|.
T Consensus       113 ~G~a~f~~~~tv~v---------~~~~~~a~~iiIATGs~p~~p~ipG~~~~~~~ts~~~~~l~~~P~~v~ViGgG~ig~  183 (459)
T PRK06370        113 RGHARFEGPNTVRV---------GGELLRAKRIFINTGARAAVPPIPGLDEVGYLTNETVFSLDELPEHLAVIGGGYIGL  183 (459)
T ss_pred             EEEEEECCCCCCCC---------CCEEEEEEEEEECCCCCCCCCCCCCCCCCCEECCHHHHCCCCCCCEEEEECCCHHHH
T ss_conf             96899715675356---------985997628998889865457778878787874468737154895499989847799


Q ss_pred             HHHHHHHHCCCCEEEEECC
Q ss_conf             9999998258838998415
Q gi|254780622|r  223 AIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~g~  241 (405)
                      ++|..+...|.+||+|+-.
T Consensus       184 E~A~~~~~~G~~Vtlv~~~  202 (459)
T PRK06370        184 EFAQAFRRFGSEVTVVERG  202 (459)
T ss_pred             HHHHHHHHHCCEEEEEEEC
T ss_conf             9999999639889999965


No 258
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and  m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=91.37  E-value=1  Score=24.47  Aligned_cols=73  Identities=25%  Similarity=0.215  Sum_probs=50.9

Q ss_pred             HHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHH
Q ss_conf             99986310132001797789840420101021357621577278899999998258838998415667765674675465
Q gi|254780622|r  177 QITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVE  256 (405)
Q Consensus       177 ~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~  256 (405)
                      .+..++... ..+|+||+|+|-+                -|..-|.-+|.-+..+||.||..|..+.             
T Consensus        14 av~~ll~~y-~i~l~Gk~vvVvG----------------rS~~VG~Pla~lL~~~~atVt~~hs~t~-------------   63 (140)
T cd05212          14 AVKELLNKE-GVRLDGKKVLVVG----------------RSGIVGAPLQCLLQRDGATVYSCDWKTI-------------   63 (140)
T ss_pred             HHHHHHHHH-CCCCCCCEEEEEC----------------CCCHHHHHHHHHHHHCCCEEEEECCCCC-------------
T ss_conf             999999980-9999999999999----------------9812499999999978898999469995-------------


Q ss_pred             HHHHHHHHHHHCCCCCEEEEEHHHHHHHH
Q ss_conf             77899999985058887997404444432
Q gi|254780622|r  257 RAEDMLQEVLKALPVDIAVMVSAVSDWRF  285 (405)
Q Consensus       257 t~~em~~~~~~~~~~D~~I~aAAVSDf~~  285 (405)
                         ++.+.   ..++|++|.|+-+..+-.
T Consensus        64 ---~l~~~---~~~ADIvI~a~G~p~~i~   86 (140)
T cd05212          64 ---QLQSK---VHDADVVVVGSPKPEKVP   86 (140)
T ss_pred             ---CHHHH---HHHCCEEEECCCCCCCCC
T ss_conf             ---98998---523499998168767278


No 259
>KOG0725 consensus
Probab=91.28  E-value=0.87  Score=24.85  Aligned_cols=35  Identities=51%  Similarity=0.650  Sum_probs=21.0

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             017977898404201010213576215772788999999982588389984
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~  239 (405)
                      .|+||.+|||+|.+               | .|.++|+.|.+.||+|+...
T Consensus         5 ~l~gkvalVTG~s~---------------G-IG~aia~~la~~Ga~v~i~~   39 (270)
T KOG0725           5 RLAGKVALVTGGSS---------------G-IGKAIALLLAKAGAKVVITG   39 (270)
T ss_pred             CCCCCEEEEECCCC---------------C-HHHHHHHHHHHCCCEEEEEE
T ss_conf             56887899979998---------------1-58999999998799899984


No 260
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=91.28  E-value=0.76  Score=25.22  Aligned_cols=30  Identities=13%  Similarity=0.150  Sum_probs=21.5

Q ss_pred             EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             9999528478999999999999879889998585
Q gi|254780622|r    8 IALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      .++|-||.+-    -.+++.|.+.|++|+++.-.
T Consensus         2 lV~GatG~iG----~~vv~~L~~~g~~Vr~l~R~   31 (232)
T pfam05368         2 LVFGATGYQG----GSVVRASLKAGHPVRALVRD   31 (232)
T ss_pred             EEECCCHHHH----HHHHHHHHHCCCCEEEEECC
T ss_conf             9989682899----99999998589938999718


No 261
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=91.25  E-value=1.2  Score=23.97  Aligned_cols=54  Identities=24%  Similarity=0.374  Sum_probs=40.5

Q ss_pred             CCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC-CCCCCCCEEEEEH
Q ss_conf             1320017977898404201010213576215772788999999982588389984156-6776567467546
Q gi|254780622|r  185 SKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV-SIADPPNVMTIHV  255 (405)
Q Consensus       185 ~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~-~~~~~~~~~~i~v  255 (405)
                      .....|+||+|+|.+                 +|.-|..-|+.+...|+.|.-++.+. .+-.|.|+..-.+
T Consensus       245 ~~~~~l~gk~vaIqG-----------------fGNVg~~aA~kl~e~GakVVavSDs~G~Iy~~~Gid~e~l  299 (469)
T PTZ00079        245 SLNIVVEKKTAVVSG-----------------SGNVAQYCVEKLLQLGAKVLTLSDSNGYIVEPNGFTEEKL  299 (469)
T ss_pred             HCCCCCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHH
T ss_conf             679985788899976-----------------6738999999999769989999838943988898899999


No 262
>pfam08659 KR KR domain. This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=91.17  E-value=0.68  Score=25.52  Aligned_cols=70  Identities=19%  Similarity=0.206  Sum_probs=40.9

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCCC--C-----------CCCCEEEE--EH---HHHHHHHHHHHHCC-CCCEEEEE
Q ss_conf             7278899999998258838998415667--7-----------65674675--46---57789999998505-88879974
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILISGPVSI--A-----------DPPNVMTI--HV---ERAEDMLQEVLKAL-PVDIAVMV  277 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~--~-----------~~~~~~~i--~v---~t~~em~~~~~~~~-~~D~~I~a  277 (405)
                      |+=.|.++|+.+..+|+++..+.+....  +           ....+..+  .+   +..+++.+.+.+.+ +.|++|++
T Consensus         9 s~GIG~aia~~la~~Ga~~vvl~~r~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnn   88 (181)
T pfam08659         9 LGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVSDRDAVAALLAEIRADGPPLRGVIHA   88 (181)
T ss_pred             CCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             87899999999998799789998689766299999999999659969999756899999998886579873984899954


Q ss_pred             HHHHHHHHH
Q ss_conf             044444322
Q gi|254780622|r  278 SAVSDWRFP  286 (405)
Q Consensus       278 AAVSDf~~~  286 (405)
                      |.+..+.+-
T Consensus        89 AG~~~~~~~   97 (181)
T pfam08659        89 AGVLRDALL   97 (181)
T ss_pred             CCCCCCCCH
T ss_conf             466788568


No 263
>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=90.55  E-value=0.86  Score=24.90  Aligned_cols=70  Identities=19%  Similarity=0.209  Sum_probs=36.9

Q ss_pred             CCCCCEEEE-EEECH-HHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             888556999-95284-78999999999999879889998585686306989999974-7975820767887787743001
Q gi|254780622|r    2 DLSGKKIAL-IMCGS-VAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAIS-NRRVYTHLLSYKEGYESNHIQL   78 (405)
Q Consensus         2 ~l~~k~Ill-gvtGs-iaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt-~~~v~~~~~~~~~~~~~~Hi~l   78 (405)
                      +++||||++ |..+| .|      .++.|.+.|++|.+.=++..     +...+.+. +-+++.   +..      +-+.
T Consensus         3 d~~~k~v~V~GlG~sG~s------~~~~L~~~G~~v~~~D~~~~-----~~~~~~l~~~~~~~~---g~~------~~~~   62 (438)
T PRK03806          3 DYQGKNVVIIGLGLTGLS------CVDFFLARGVTPRVMDTRMT-----PPGLDKLPENVERHT---GSL------NDEW   62 (438)
T ss_pred             CCCCCEEEEEEECHHHHH------HHHHHHHCCCEEEEEECCCC-----CHHHHHHHCCCCEEE---CCC------CHHH
T ss_conf             778998999945788899------99999978996999989999-----005788645884665---777------9668


Q ss_pred             CCCCCEEEEEECC
Q ss_conf             1446557884111
Q gi|254780622|r   79 ANECDLLVVAPAS   91 (405)
Q Consensus        79 ~~~aD~~iVaPaT   91 (405)
                      -..+|++|+.|.=
T Consensus        63 ~~~~d~vV~SPGI   75 (438)
T PRK03806         63 LLAADLIVASPGI   75 (438)
T ss_pred             HCCCCEEEECCCC
T ss_conf             0679999989978


No 264
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=90.54  E-value=1.4  Score=23.56  Aligned_cols=148  Identities=19%  Similarity=0.123  Sum_probs=82.1

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH--------HEECCEEEEECCCCCHHHHHHHH----HHHHCCCCE
Q ss_conf             345589999999863101320017977898404201--------01021357621577278899999----998258838
Q gi|254780622|r  168 MSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY--------EPLDPMRYIANRSSGQQGHAIAK----SLAYFGAEV  235 (405)
Q Consensus       168 l~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~--------E~ID~VR~ItN~SSGk~G~~iA~----~~~~~Ga~V  235 (405)
                      ...|..++..+...+-        ...++++-+|+.        ..-.|-|++++.+.|-||+.+.-    .+...+-.|
T Consensus       385 ~i~p~~~~~~l~~~lp--------~d~iiv~D~G~~~~~~~~~~~~~~p~~~~~~~~~G~mG~glpaAiGa~lA~p~~~V  456 (589)
T PRK07525        385 YMHPRQALRAIQKALP--------EDAIVSTDIGNNCSIANSYLRFEKGRKYLAPGSFGNCGYAFPAIIGAKIACPDRPV  456 (589)
T ss_pred             CCCHHHHHHHHHHHCC--------CCCEEEECCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCE
T ss_conf             6289999999997669--------98489946721899999975404887165047656532257899999985899968


Q ss_pred             EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH-HHCCCCCCCCCCCCEEEEEECHHHHH
Q ss_conf             99841566776567467546577899999985058887997404444432222-10112334557751045521806898
Q gi|254780622|r  236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKI-AGTKIKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~-~~~Kikk~s~~~~l~L~L~~~pdIL~  314 (405)
                      .+|.|-.+.          --+.+|+..++...++.-++|+.=.-  |-.... +.....    +.....+|.++||.-+
T Consensus       457 v~i~GDG~f----------~m~~~EL~Ta~r~~lpv~ivV~NN~~--yg~~~~~q~~~~~----~~~~~~~~~~~~df~~  520 (589)
T PRK07525        457 VGFAGDGAW----------GISMNEMTTCVRHNWPVTAVVFRNYQ--WGAEKKNQTDFYN----NRFVGTELDNNVSYAG  520 (589)
T ss_pred             EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCC--CHHHHHHHHHHHC----CCEECCCCCCCCCHHH
T ss_conf             999885687----------55299999999978892899997883--3489999998718----8412032699989899


Q ss_pred             HHHHCCCCCCEEEEEECCCCHHHHHHHHHH
Q ss_conf             876214899589998114123899999999
Q gi|254780622|r  315 IIGHHQCRPSIVVGFAAETQCIEQNAREKL  344 (405)
Q Consensus       315 ~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl  344 (405)
                      . .+--.    +=|+..|+.+-++.|.+..
T Consensus       521 ~-A~a~G----~~g~rV~~~~el~~al~~A  545 (589)
T PRK07525        521 I-ARAMG----AEGVVVDTQEELGPALKRA  545 (589)
T ss_pred             H-HHHCC----CEEEEECCHHHHHHHHHHH
T ss_conf             9-99779----8799989999999999999


No 265
>PRK12446 N-acetylglucosaminyl transferase; Reviewed
Probab=90.53  E-value=0.37  Score=27.27  Aligned_cols=39  Identities=26%  Similarity=0.225  Sum_probs=29.1

Q ss_pred             CEEEEEEECHH-HHHHHHHHHHHHHHCCCEEEEEECHHHH
Q ss_conf             56999952847-8999999999999879889998585686
Q gi|254780622|r    6 KKIALIMCGSV-AVYKSLDLIRRLRERGAVVIPVMTKSAQ   44 (405)
Q Consensus         6 k~IllgvtGsi-aa~k~~~l~~~L~~~g~~V~vv~T~~A~   44 (405)
                      |||++.-.|.- -.|-+.-++++|++.|++|..+-|+.+.
T Consensus         2 kkIii~~GGTGGHi~Palala~~L~~~~~~v~~ig~~~g~   41 (352)
T PRK12446          2 KKIVFTGGGSAGHVTPNLAIIPKLIEDNWDISYIGSHQGI   41 (352)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHH
T ss_conf             8799995875888999999999998489959999889605


No 266
>PRK00726 murG N-acetylglucosaminyl transferase; Provisional
Probab=90.40  E-value=0.38  Score=27.19  Aligned_cols=38  Identities=37%  Similarity=0.412  Sum_probs=29.7

Q ss_pred             CEEEEEEECH-HHHHHHHHHHHHHHHCCCEEEEEECHHH
Q ss_conf             5699995284-7899999999999987988999858568
Q gi|254780622|r    6 KKIALIMCGS-VAVYKSLDLIRRLRERGAVVIPVMTKSA   43 (405)
Q Consensus         6 k~IllgvtGs-iaa~k~~~l~~~L~~~g~~V~vv~T~~A   43 (405)
                      |||++...|+ --.|-+.-++++|++.|++|..+-|+..
T Consensus         2 kkI~i~~GGTGGHi~Palala~~L~~~g~ev~~ig~~~g   40 (359)
T PRK00726          2 KKILLAGGGTGGHVFPALALAEELKKRGWEVLWLGTKRG   40 (359)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH
T ss_conf             889999588689999999999999838798999978826


No 267
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=90.31  E-value=1.3  Score=23.78  Aligned_cols=30  Identities=20%  Similarity=0.364  Sum_probs=20.1

Q ss_pred             EEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             9952847899999999999987988999858
Q gi|254780622|r   10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus        10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      +.|||+- -|=.-+.+++|.+.|++|.|+=.
T Consensus         3 iLVtGGA-GYIGSHtv~~Ll~~G~~vvV~DN   32 (329)
T COG1087           3 VLVTGGA-GYIGSHTVRQLLKTGHEVVVLDN   32 (329)
T ss_pred             EEEECCC-CHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             9996586-54689999999978984899956


No 268
>TIGR01179 galE UDP-glucose 4-epimerase; InterPro: IPR005886    Synonym: UDP-galactose 4-epimerase UDP-glucose 4-epimerase (5.1.3.2 from EC) interconverts UDP-glucose and UDP-galactose which are precursors of glucose- and galactose-containing exopolysaccharides (EPS). A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded and described by a separate model. ; GO: 0003978 UDP-glucose 4-epimerase activity, 0006012 galactose metabolic process.
Probab=90.26  E-value=0.98  Score=24.52  Aligned_cols=231  Identities=15%  Similarity=0.133  Sum_probs=113.5

Q ss_pred             EEEECHHHHHHHHHHHHHHHHCCCEEEEE--ECHHHHHHCCHHHHHHHHCCCC---CCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf             99528478999999999999879889998--5856863069899999747975---820767887787743-00114465
Q gi|254780622|r   10 LIMCGSVAVYKSLDLIRRLRERGAVVIPV--MTKSAQKFITPLIVGAISNRRV---YTHLLSYKEGYESNH-IQLANECD   83 (405)
Q Consensus        10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv--~T~~A~~fi~~~~l~~lt~~~v---~~~~~~~~~~~~~~H-i~l~~~aD   83 (405)
                      |-|||+ |=|=-=+.+|.|-+.|++|-|.  +|.+..++|.  .++.++|+++   .-|+.|...-...-| -+|....|
T Consensus         2 iLVTGG-AGYIGSHt~~~Ll~~G~ev~vlDNLs~G~~~~l~--~~~~~~G~~~~fv~gDL~D~~~l~~~f~kqql~~~id   78 (341)
T TIGR01179         2 ILVTGG-AGYIGSHTVRQLLESGYEVVVLDNLSNGSAEALK--RGEEITGKEVTFVEGDLRDRELLRRVFEKQQLEHKID   78 (341)
T ss_pred             EEEEEC-CCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHC--CCCEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC
T ss_conf             268614-6644358878876359728998157888488750--0234148532058717515799999987743116754


Q ss_pred             EEEEEECC------------------HHHHH---HH-HCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHH-HHH-----
Q ss_conf             57884111------------------88898---85-2024552146667522799689840566000003-889-----
Q gi|254780622|r   84 LLVVAPAS------------------ANFIA---HV-AHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAK-PAT-----  135 (405)
Q Consensus        84 ~~iVaPaT------------------aNtia---K~-A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~-p~~-----  135 (405)
                      ++|=.-+.                  -|||.   -+ .+|+-+=..|+++.-++...-   +--.+.|-.+ |+.     
T Consensus        79 AViHFAg~~~VgESv~~Pl~YY~NNv~nTl~L~~~m~~~GV~~~iFSSsAaVYG~p~~---~Pi~E~~pl~~PinPYG~s  155 (341)
T TIGR01179        79 AVIHFAGLIAVGESVQKPLKYYRNNVVNTLNLLEAMQETGVKKFIFSSSAAVYGEPES---IPISEDSPLGDPINPYGRS  155 (341)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCC---CCCCCCCCCCCCCCCCCCC
T ss_conf             6752011212525575245440004689999999999818974153042145077885---5502225677874866556


Q ss_pred             H-------HHHHHH-HHHCCC------CCCCCHHHHHHCC-CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
Q ss_conf             9-------999998-640001------3465212553103-223334345589999999863101320017977898404
Q gi|254780622|r  136 Q-------RNVEIL-QKDGCY------FIGPESGAMAESN-GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSG  200 (405)
Q Consensus       136 ~-------~nl~~L-~~~g~~------vi~P~~g~la~c~-~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG  200 (405)
                      +       +-+++- ..|.+.      +.+-..     .| +.|..--++|..++..++....-.       +.=|=--|
T Consensus       156 KlM~E~iL~D~~~a~~~~~~v~LRYFNv~GA~p-----~GY~iGe~~~~~tNhLip~~~~~A~G~-------~~~l~IFG  223 (341)
T TIGR01179       156 KLMVERILRDLSKADPDLSYVILRYFNVAGADP-----EGYEIGEDPPGITNHLIPYACQVAVGK-------RDKLTIFG  223 (341)
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC-----CCCCCCCCCCCCCCCHHHHHHHHHCCC-------CCCCEECC
T ss_conf             688999999998738767799850578514488-----877236685202941899999984489-------97313624


Q ss_pred             CCHHEECC--EE---EEECCCCCHHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCC
Q ss_conf             20101021--35---76215772788999999982588389984-156677656746754657789999998505888
Q gi|254780622|r  201 PTYEPLDP--MR---YIANRSSGQQGHAIAKSLAYFGAEVILIS-GPVSIADPPNVMTIHVERAEDMLQEVLKALPVD  272 (405)
Q Consensus       201 ~T~E~ID~--VR---~ItN~SSGk~G~~iA~~~~~~Ga~V~li~-g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D  272 (405)
                      .=+.-.|-  ||   ...=.+.|   ...|.+.+..|.+..... |..+           =.|..|+.+++.+..-.|
T Consensus       224 tDYPT~DGTcvRDYIHV~DLA~A---H~~Al~~L~~g~~s~~~NlG~G~-----------G~SV~EVi~a~~~vsG~~  287 (341)
T TIGR01179       224 TDYPTPDGTCVRDYIHVMDLAEA---HLAALEYLENGGESHVYNLGYGQ-----------GFSVLEVIEAFKKVSGKD  287 (341)
T ss_pred             CCCCCCCCCEEEEEEECCCHHHH---HHHHHHHHHCCCCEEEEECCCCC-----------CCCHHHHHHHHHHHCCCE
T ss_conf             87876798765300200207778---99999998607963698624675-----------410999999986610981


No 269
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=90.25  E-value=0.95  Score=24.60  Aligned_cols=79  Identities=13%  Similarity=0.210  Sum_probs=50.0

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC---CCCEEEEEHHHHHHHHHHH
Q ss_conf             0179778984042010102135762157727889999999825883899841566776---5674675465778999999
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIAD---PPNVMTIHVERAEDMLQEV  265 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~---~~~~~~i~v~t~~em~~~~  265 (405)
                      +|.+++|||-+                 .|.||...++++..+|+.-..|.+.+....   -..+....+...+++.+.+
T Consensus       178 ~l~~~~vlvvG-----------------aGem~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~~~~~~~~~~~l~~~l  240 (414)
T PRK13940        178 NISSKNVLIIG-----------------AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLI  240 (414)
T ss_pred             CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf             71228389966-----------------8647899999999769987999457567799999970888501699999998


Q ss_pred             HHCCCCCEEEEEHHHHHHHHHH
Q ss_conf             8505888799740444443222
Q gi|254780622|r  266 LKALPVDIAVMVSAVSDWRFPK  287 (405)
Q Consensus       266 ~~~~~~D~~I~aAAVSDf~~~~  287 (405)
                         ..+|++|.|.+..+|.+..
T Consensus       241 ---~~aDivisaT~a~~~ii~~  259 (414)
T PRK13940        241 ---KKADIIIAAVNVLEYIVTC  259 (414)
T ss_pred             ---HHCCEEEEECCCCHHHCCH
T ss_conf             ---6388799816982444048


No 270
>TIGR01777 yfcH conserved hypothetical protein TIGR01777; InterPro: IPR010099   This entry represents proteins of unknown function including the Escherichia coli YfcH protein..
Probab=90.22  E-value=0.43  Score=26.83  Aligned_cols=110  Identities=14%  Similarity=0.109  Sum_probs=62.9

Q ss_pred             C-CCHHHHHHHHHHHHCCCCEEEEECCCC-CCCCCCEEEEEHHHH----HHHHHHHH--HCCCCCEEEEEHHHHHHHHHH
Q ss_conf             7-727889999999825883899841566-776567467546577----89999998--505888799740444443222
Q gi|254780622|r  216 S-SGQQGHAIAKSLAYFGAEVILISGPVS-IADPPNVMTIHVERA----EDMLQEVL--KALPVDIAVMVSAVSDWRFPK  287 (405)
Q Consensus       216 S-SGk~G~~iA~~~~~~Ga~V~li~g~~~-~~~~~~~~~i~v~t~----~em~~~~~--~~~~~D~~I~aAAVSDf~~~~  287 (405)
                      + ||-.|.+|+.++..+|++|+.++=... ...............    -+|.+ -.  ....+|++|+-|=-+=+.| +
T Consensus         6 gnTGfiG~~L~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~W~~l~~~DaviNLAG~~i~~P-~   83 (307)
T TIGR01777         6 GNTGFIGRALTQRLTKSGHEVTILTRSPQAESNTKKVGYKNWLAEGKLGIVIAE-SGWSALEGADAVINLAGEPIADP-K   83 (307)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCH-HCCCCCCCCCEEEECCCCCCCCC-C
T ss_conf             330237899999998479989999616864320002554455552212452072-20566788627985568885778-8


Q ss_pred             HHHCCCCCCCCCCCCEEEEEECHHHHHHHHH---CCCCCCEEEEEEC
Q ss_conf             2101123345577510455218068988762---1489958999811
Q gi|254780622|r  288 IAGTKIKRKDIGDTMRIDLMENPDILKIIGH---HQCRPSIVVGFAA  331 (405)
Q Consensus       288 ~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~---~k~~~~~lVGFka  331 (405)
                      +=..+.|+ ..   +.=++..|.-+...|.+   .+.++.++|-=+|
T Consensus        84 RWt~~~K~-~i---~~SRi~~T~~L~~~i~~~~r~~~~P~~~isaSA  126 (307)
T TIGR01777        84 RWTEERKQ-EI---RDSRIDTTRALVEAIAAAPRAEQKPKVFISASA  126 (307)
T ss_pred             CCCHHHHH-HH---HHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
T ss_conf             87877757-56---523347899999999846566788716885016


No 271
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=90.20  E-value=0.99  Score=24.48  Aligned_cols=99  Identities=20%  Similarity=0.256  Sum_probs=61.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             33343455899999998631013200179778984042010102135762157727889999999825883899841566
Q gi|254780622|r  164 GVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS  243 (405)
Q Consensus       164 G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~  243 (405)
                      |.|...=+..-++...+.+.     +|++++|||-+                 -|.||...|+++..+|....+|.+.+.
T Consensus       155 ~~~~VSi~saAv~lA~~~~~-----~L~~~~vlvIG-----------------AGem~~lva~~L~~~g~~~i~IaNRT~  212 (414)
T COG0373         155 GKGAVSISSAAVELAKRIFG-----SLKDKKVLVIG-----------------AGEMGELVAKHLAEKGVKKITIANRTL  212 (414)
T ss_pred             CCCCCCHHHHHHHHHHHHHC-----CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCCEEEEECCCH
T ss_conf             88861239999999999836-----54467699986-----------------518999999999858987799975878


Q ss_pred             CCCCCCEEE--EEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH
Q ss_conf             776567467--54657789999998505888799740444443222
Q gi|254780622|r  244 IADPPNVMT--IHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPK  287 (405)
Q Consensus       244 ~~~~~~~~~--i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~  287 (405)
                      .....=.+.  ..+.+.+|+...+.   ++|++|++-+-..|.+..
T Consensus       213 erA~~La~~~~~~~~~l~el~~~l~---~~DvVissTsa~~~ii~~  255 (414)
T COG0373         213 ERAEELAKKLGAEAVALEELLEALA---EADVVISSTSAPHPIITR  255 (414)
T ss_pred             HHHHHHHHHHCCEEECHHHHHHHHH---HCCEEEEECCCCCCCCCH
T ss_conf             9999999983870221877887652---079999906998554078


No 272
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase; InterPro: IPR011912   Lipopolysaccharides (LPS) are glycolipids that consitutes the outer monolayer of the outer membranes of most Gram-negative bacteria . They consist of lipid A (endotoxin) which anchors LPS to the outer membrane, a non-repeating core oligosachharide, and an immunogenic O-antigen repeat polymer, which is an oligosaccharide of 1-40 units that variesbetween different strains of bacteria. Although the O-antigen and most of the core domain are not necessary for growth in the lab, they appear to help bacteria resist environmental stresses including the complement system and antibiotics.   This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of LPS in Gram-negative bacteria . This enzyme is homologous to UDP-glucose 4-epimerase (IPR005886 from INTERPRO) and belongs to the NAD dependent epimerase/dehydratase family. It participates in the biosynthetic pathway leading to incorporation of heptose, a conserved sugar, into the core region of LPS, performing the reaction shown below: ADP-D-glycero-D-manno-heptose = ADP-L-glycero-D-manno-heptose It is a homopentameric enzyme with each monomer composed of two domains: an N-terminal modified Rossman fold domain for NADP binding, and a C-terminal substrate binding domain.; GO: 0008712 ADP-glyceromanno-heptose 6-epimerase activity, 0050661 NADP binding, 0005975 carbohydrate metabolic process.
Probab=90.18  E-value=0.92  Score=24.68  Aligned_cols=114  Identities=16%  Similarity=0.186  Sum_probs=54.1

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHH--CCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHH
Q ss_conf             017977898404201010213576215772788999999982--588389984156677656746754657789999998
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAY--FGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVL  266 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~--~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~  266 (405)
                      .+.|.|--=--||-..+           -|+|..-+.+.+.+  .|-.|.|.-+. +....+|=+...+...+|--+..+
T Consensus       184 q~~GLrYFNVYGP~E~H-----------KG~MASv~f~~~~q~~~~~~v~LF~~~-~~~~~dGeQ~RDFVYV~DV~~~n~  251 (353)
T TIGR02197       184 QVVGLRYFNVYGPREYH-----------KGKMASVAFHLFNQIKAGGNVKLFKSH-KEGFKDGEQLRDFVYVKDVVKVNL  251 (353)
T ss_pred             CEEEEEECCCCCCCCCC-----------CCCHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCEEHHHHHHHHH
T ss_conf             42410211346888675-----------443699999988899737882023566-858988781101155276999999


Q ss_pred             HCCC----CCEE---EEE----HHHHHHHHHHHH--HCC-CCCCCCCCCCEEEEEECHHHHH
Q ss_conf             5058----8879---974----044444322221--011-2334557751045521806898
Q gi|254780622|r  267 KALP----VDIA---VMV----SAVSDWRFPKIA--GTK-IKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       267 ~~~~----~D~~---I~a----AAVSDf~~~~~~--~~K-ikk~s~~~~l~L~L~~~pdIL~  314 (405)
                      ..++    +-++   ---    -++++-......  .++ ++-++.-+...|+..+.|+-|+
T Consensus       252 ~~~~~~~~SGifN~GtG~ArsF~dla~a~~~~~~~~~~~~LSl~~lv~~~~i~Yi~~Pe~lr  313 (353)
T TIGR02197       252 WLLENPSKSGIFNVGTGKARSFNDLADAVFKALGTNKGEPLSLKELVEDFKIEYIDMPEALR  313 (353)
T ss_pred             HHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEECCCHHHH
T ss_conf             99848898415644778886689999999998731468885779887306720102835740


No 273
>PRK06953 short chain dehydrogenase; Provisional
Probab=90.11  E-value=1.5  Score=23.33  Aligned_cols=14  Identities=36%  Similarity=0.638  Sum_probs=7.1

Q ss_pred             HHHHHHHHCCCEEE
Q ss_conf             99999998798899
Q gi|254780622|r   23 DLIRRLRERGAVVI   36 (405)
Q Consensus        23 ~l~~~L~~~g~~V~   36 (405)
                      .+++.|.++|+.|.
T Consensus        16 a~a~~la~~G~~V~   29 (222)
T PRK06953         16 EFVRQYRADGWRVI   29 (222)
T ss_pred             HHHHHHHHCCCEEE
T ss_conf             99999998889999


No 274
>pfam01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family. The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones.
Probab=89.95  E-value=1.5  Score=23.24  Aligned_cols=19  Identities=21%  Similarity=0.188  Sum_probs=13.3

Q ss_pred             HHHHHHHHHHCCC--EEEEEE
Q ss_conf             9999999998798--899985
Q gi|254780622|r   21 SLDLIRRLRERGA--VVIPVM   39 (405)
Q Consensus        21 ~~~l~~~L~~~g~--~V~vv~   39 (405)
                      .-.|+++|.++|+  +|+++-
T Consensus        10 Gs~lv~~Ll~~g~~~~V~~~d   30 (280)
T pfam01073        10 GRHIVRLLLREGELQEVRVFD   30 (280)
T ss_pred             HHHHHHHHHHCCCCCEEEEEE
T ss_conf             999999999779975799987


No 275
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion]
Probab=89.64  E-value=1.3  Score=23.75  Aligned_cols=76  Identities=16%  Similarity=0.253  Sum_probs=55.7

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECCC---------------CCHHH
Q ss_conf             2233343455899999998631013200179778984042010-----102135762157---------------72788
Q gi|254780622|r  162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANRS---------------SGQQG  221 (405)
Q Consensus       162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~S---------------SGk~G  221 (405)
                      -.|.|++-++..+.-.-.      ...-+..++|+|..|..--     .+|..|+++|..               .|--|
T Consensus       112 i~G~a~f~~~~~v~V~~~------~~~~~~a~~iiIATGS~p~~~~~~~~~~~~~~~s~~~l~~~~lP~~lvIiGgG~IG  185 (454)
T COG1249         112 IRGEARFVDPHTVEVTGE------DKETITADNIIIATGSRPRIPPGPGIDGARILDSSDALFLLELPKSLVIVGGGYIG  185 (454)
T ss_pred             EEEEEEECCCCEEEEECC------CCEEEEECEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCHHH
T ss_conf             998999888998999068------75499827899906998778998898887488353413601079879998988899


Q ss_pred             HHHHHHHHHCCCCEEEEECCCC
Q ss_conf             9999999825883899841566
Q gi|254780622|r  222 HAIAKSLAYFGAEVILISGPVS  243 (405)
Q Consensus       222 ~~iA~~~~~~Ga~V~li~g~~~  243 (405)
                      .++|..+...|.+||+|...-.
T Consensus       186 ~E~a~~~~~LG~~VTive~~~~  207 (454)
T COG1249         186 LEFASVFAALGSKVTVVERGDR  207 (454)
T ss_pred             HHHHHHHHHCCCCEEEEECCCC
T ss_conf             9999999986997899946887


No 276
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=89.48  E-value=1.7  Score=23.02  Aligned_cols=75  Identities=20%  Similarity=0.161  Sum_probs=36.4

Q ss_pred             CCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8855699-995284789999999999998798899985856863069899999747975820767887787743001144
Q gi|254780622|r    3 LSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANE   81 (405)
Q Consensus         3 l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~   81 (405)
                      |+||||+ +|+.+|-   .+  .++.|.+.|++|.+.=.....  -++.+ +.+....+... .+..+   ...  +.+.
T Consensus         7 ~~~k~i~viGlG~sG---~s--~a~~L~~~G~~V~~~D~~~~~--~~~~~-~~l~~~gi~~~-~g~~~---~~~--~~~~   72 (450)
T PRK02472          7 FQNKKVLVLGLAKSG---YA--AAKLLHKLGANVTVNDGKPFS--ENPAA-QELLEEGIKVI-CGSHP---LEL--LDEN   72 (450)
T ss_pred             CCCCEEEEEEECHHH---HH--HHHHHHHCCCEEEEEECCCCC--CCHHH-HHHHHCCCEEE-ECCCH---HHH--CCCC
T ss_conf             589989999778999---99--999999886989998488665--79899-99996799899-78880---786--0578


Q ss_pred             CCEEEEEECC
Q ss_conf             6557884111
Q gi|254780622|r   82 CDLLVVAPAS   91 (405)
Q Consensus        82 aD~~iVaPaT   91 (405)
                      .|++|+.|+=
T Consensus        73 ~d~vV~SPgI   82 (450)
T PRK02472         73 FDLMVKNPGI   82 (450)
T ss_pred             CCEEEECCCC
T ss_conf             8799989987


No 277
>COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism]
Probab=89.41  E-value=0.53  Score=26.23  Aligned_cols=52  Identities=17%  Similarity=0.148  Sum_probs=21.9

Q ss_pred             HCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCC---CCCEEEEEHHHHH
Q ss_conf             2588389984156677656746754657789999998505---8887997404444
Q gi|254780622|r  230 YFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKAL---PVDIAVMVSAVSD  282 (405)
Q Consensus       230 ~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~---~~D~~I~aAAVSD  282 (405)
                      ..|..|....||+.. .+..++.+.-.++.-|--++.+..   -+++-..+.+++.
T Consensus       181 l~gk~Vlit~G~t~E-~idpvr~itn~ssGk~g~alA~a~~~~GA~V~lv~g~~~~  235 (392)
T COG0452         181 LKGKKVLITAGPTRE-YIDPVRFISNRSSGKMGFALAAAAKRRGASVTLVSGPTSL  235 (392)
T ss_pred             CCCCEEEEECCCCCC-CCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCC
T ss_conf             269779874798665-7662012124445545689999999769825881487767


No 278
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=89.38  E-value=0.73  Score=25.35  Aligned_cols=75  Identities=16%  Similarity=0.137  Sum_probs=36.7

Q ss_pred             CCCCCEEEEEEEC-HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8885569999528-478999999999999879889998585686306989999974797582076788778774300114
Q gi|254780622|r    2 DLSGKKIALIMCG-SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLAN   80 (405)
Q Consensus         2 ~l~~k~IllgvtG-siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~   80 (405)
                      .+++|+|++.=-| |-     .-++|.|.+.|++|.+.=++...  -....++.. +.++  +.....    . .-.+-.
T Consensus         4 ~~~~k~vlV~GlG~sG-----~a~a~~L~~~G~~V~~~D~~~~~--~~~~~l~~~-~~~~--~~~~g~----~-~~~~~~   68 (501)
T PRK02006          4 DRQRPMVLVLGLGESG-----LAMARWCARHGCRLRVADTREAP--PNLAALQAE-GIDA--EFVGGA----F-DPALLD   68 (501)
T ss_pred             CCCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEECCCCC--CCHHHHHHC-CCCC--EEECCC----C-CHHHHC
T ss_conf             6689839998336889-----99999999789849999899998--619999860-8981--897788----9-867846


Q ss_pred             CCCEEEEEECC
Q ss_conf             46557884111
Q gi|254780622|r   81 ECDLLVVAPAS   91 (405)
Q Consensus        81 ~aD~~iVaPaT   91 (405)
                      .+|++|+.|.=
T Consensus        69 ~~d~vV~SPGI   79 (501)
T PRK02006         69 GVELVALSPGL   79 (501)
T ss_pred             CCCEEEECCEE
T ss_conf             89999989900


No 279
>TIGR01139 cysK cysteine synthase A; InterPro: IPR005859    This model discriminates cysteine synthase A (CysK) and cysteine synthase B (CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded.    Cysteine synthase (O-acetylserine (thiol)-lyase, 2.5.1.47 from EC) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysK differs from CysM in that it can also use sulphide instead of thiosulphate, to produce cysteine instead of cysteine thiosulphonate. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=89.34  E-value=0.61  Score=25.83  Aligned_cols=112  Identities=19%  Similarity=0.285  Sum_probs=70.4

Q ss_pred             CCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHC
Q ss_conf             65578841118889885202455214666752279968984056600000388999999986400013-46521255310
Q gi|254780622|r   82 CDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYF-IGPESGAMAES  160 (405)
Q Consensus        82 aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~v-i~P~~g~la~c  160 (405)
                      .+-.||=|.|.||      ||+   |..++.|.+-| +++  .|...|     ..|=-+.|+.+|..+ +-|-...    
T Consensus        58 ~G~~IvEpTSGNT------GIa---LAmvAAArGYk-lil--tMPetM-----S~ERr~lL~ayGAeLvLTpg~~G----  116 (312)
T TIGR01139        58 PGKTIVEPTSGNT------GIA---LAMVAAARGYK-LIL--TMPETM-----SIERRKLLKAYGAELVLTPGAEG----  116 (312)
T ss_pred             CCCEEEECCCCCH------HHH---HHHHHHHHCCE-EEE--ECCCCH-----HHHHHHHHHHCCCEEEECCCCCC----
T ss_conf             8888982377732------699---99999871894-999--867432-----68999999870965887281237----


Q ss_pred             CCCCCCCCCCHHHHHHHHH-HH-HHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCC--CCHHHHHHHHHHHHCCCCE-
Q ss_conf             3223334345589999999-86-31013200179778984042010102135762157--7278899999998258838-
Q gi|254780622|r  161 NGYGVGRMSEPCDIIRQIT-WL-LYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRS--SGQQGHAIAKSLAYFGAEV-  235 (405)
Q Consensus       161 ~~~G~grl~e~~~I~~~~~-~~-~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~S--SGk~G~~iA~~~~~~Ga~V-  235 (405)
                         .+|-...=++|++..= .+ +.++-+    |                   ..|+.  -=.||-+|.+..--+| .| 
T Consensus       117 ---MkGAI~KA~Ei~~~~Pn~y~m~~QF~----N-------------------pANP~~Hr~TTg~EIw~d~dg~G-~~D  169 (312)
T TIGR01139       117 ---MKGAIAKAEEIAESTPNSYFMLQQFE----N-------------------PANPEIHRKTTGPEIWRDTDGKG-RLD  169 (312)
T ss_pred             ---CHHHHHHHHHHHHHCCCCEEECCCCC----C-------------------CCHHHHHHHCCHHHHHHHHCCCC-CEE
T ss_conf             ---66678999999986879265224578----7-------------------22147616202789999627898-311


Q ss_pred             EEEECC
Q ss_conf             998415
Q gi|254780622|r  236 ILISGP  241 (405)
Q Consensus       236 ~li~g~  241 (405)
                      .+|+|-
T Consensus       170 ~FVaG~  175 (312)
T TIGR01139       170 AFVAGV  175 (312)
T ss_pred             EEEEEE
T ss_conf             799732


No 280
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=89.29  E-value=1.7  Score=22.93  Aligned_cols=183  Identities=22%  Similarity=0.244  Sum_probs=85.0

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC-HHHHHHCCHHHHHHHH--CCCCCCCCCCCCCCC-------
Q ss_conf             888556999952847899999999999987988999858-5686306989999974--797582076788778-------
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT-KSAQKFITPLIVGAIS--NRRVYTHLLSYKEGY-------   71 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T-~~A~~fi~~~~l~~lt--~~~v~~~~~~~~~~~-------   71 (405)
                      +|+|.||..++-=   -.|+.-|++.|+..|++|++.-+ +-++   .+..-.+|-  |-+|+-......+++       
T Consensus        42 Pl~G~rI~~clHl---e~kTA~L~~tL~~~GAeV~~~~~NplST---QDdvaAaL~~~Gi~VfA~~g~t~eey~~~~~~~  115 (427)
T PRK05476         42 PLKGARIAGCLHM---TIQTAVLIETLKALGAEVRWASCNPFST---QDHAAAALAAAGIPVFAWKGETLEEYWEAIERA  115 (427)
T ss_pred             CCCCCEEEEEEEE---CHHHHHHHHHHHHCCCEEEEECCCCCCC---CHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHH
T ss_conf             9899889999830---0889999999998499899954798764---579999998689169997898999999999997


Q ss_pred             --CCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             --7743001144655788411188898852024552146667--522799689840566000003889999999864000
Q gi|254780622|r   72 --ESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGC  147 (405)
Q Consensus        72 --~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~  147 (405)
                        .-||+-+-.=+|+..+.-.-..-+.+--.|.+.---|.+.  .+-.+...+-+|+++.|  +.+ +            
T Consensus       116 L~~~P~iiiDDG~Dl~~~lh~~~~~~~~~i~G~~EETTTGv~RL~am~~~g~L~~PviavN--Da~-t------------  180 (427)
T PRK05476        116 LDWGPNMILDDGGDLTLLVHTERPELLANIKGVTEETTTGVHRLYAMAKDGELKFPAINVN--DSV-T------------  180 (427)
T ss_pred             HCCCCCEEEECCCHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHCCCCCCCEEEEC--CHH-H------------
T ss_conf             5559987875652289999986056675416303475263899999986697777779865--534-4------------


Q ss_pred             CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHH
Q ss_conf             13465212553103223334345589999999863101320017977898404201010213576215772788999999
Q gi|254780622|r  148 YFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKS  227 (405)
Q Consensus       148 ~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~  227 (405)
                             +.+. =+.+|.|     ...++.+.+.-+    ..+.||+|+|-+=                 |--|.-+|..
T Consensus       181 -------K~~F-DNrYGtG-----qS~~dgi~r~Tn----~llaGK~vVV~GY-----------------G~~GkG~A~~  226 (427)
T PRK05476        181 -------KSKF-DNRYGTG-----ESLLDGIKRATN----VLIAGKVVVVAGY-----------------GDVGKGSAQR  226 (427)
T ss_pred             -------HHHC-CCCCCCC-----CCHHHHHHHHHC----CEECCCEEEEECC-----------------CCCCCHHHHH
T ss_conf             -------2222-4553346-----249999998735----2125737999556-----------------6556008998


Q ss_pred             HHHCCCCEEEEE
Q ss_conf             982588389984
Q gi|254780622|r  228 LAYFGAEVILIS  239 (405)
Q Consensus       228 ~~~~Ga~V~li~  239 (405)
                      +.-.||.|+..-
T Consensus       227 arg~GA~ViVtE  238 (427)
T PRK05476        227 LRGLGARVIVTE  238 (427)
T ss_pred             HHCCCCEEEEEE
T ss_conf             741898799980


No 281
>PRK07578 short chain dehydrogenase; Provisional
Probab=89.27  E-value=1.7  Score=22.91  Aligned_cols=63  Identities=22%  Similarity=0.174  Sum_probs=34.5

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHH
Q ss_conf             7278899999998258838998415667765674675465778999999850588879974044444322
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFP  286 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~  286 (405)
                      |+=.|.++|+.+..+ ++|..+... ...    ++ ..+...++..+.+.+.-+.|++|.+|.+..+.+-
T Consensus         9 s~GIG~aia~~la~~-~~vv~~~r~-~~~----~~-~Dvtd~~~v~~~~~~~G~iD~lVnnAG~~~~~~~   71 (199)
T PRK07578          9 SGTIGRAVVAELSAR-HEVITAGRS-SGD----VQ-VDITDPASIRALFEKVGKVDAVVSAAGKVHFAPL   71 (199)
T ss_pred             CCHHHHHHHHHHHCC-CCEEEEECC-CCC----EE-EECCCHHHHHHHHHHHCCCCEEEECCCCCCCCCH
T ss_conf             748999999999679-998998368-677----56-8588999999999962999899988722679894


No 282
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=89.27  E-value=1.7  Score=22.91  Aligned_cols=147  Identities=19%  Similarity=0.281  Sum_probs=87.8

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEE--------CCEEEEECCCCCHHHH----HHHHHHHHCCCCE
Q ss_conf             345589999999863101320017977898404201010--------2135762157727889----9999998258838
Q gi|254780622|r  168 MSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPL--------DPMRYIANRSSGQQGH----AIAKSLAYFGAEV  235 (405)
Q Consensus       168 l~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~I--------D~VR~ItN~SSGk~G~----~iA~~~~~~Ga~V  235 (405)
                      ...|..++..+.+.+        .+.-++++-+|+...+        .|-|+++..+.|-||+    +|.-.+......|
T Consensus       371 ~i~p~~~~~~l~~~~--------~~d~ii~~D~G~~~~~~~~~~~~~~p~~~~~~~~~GsmG~glpaAiGA~lA~p~~~V  442 (574)
T PRK06882        371 VIKPQQVVEAIYRLT--------NGDAYVASDVGQHQMFAALHYPFDKPRRWINSGGAGTMGFGLPAAIGVKFAHPEGTV  442 (574)
T ss_pred             CCCHHHHHHHHHHCC--------CCCEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf             668899999998417--------997499975881499998756667897231689874423223899999985899858


Q ss_pred             EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH----HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH
Q ss_conf             99841566776567467546577899999985058887997404----44443222210112334557751045521806
Q gi|254780622|r  236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA----VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD  311 (405)
Q Consensus       236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA----VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd  311 (405)
                      .+|.|-.+.          --+.+|+..++...++.-++|+.=.    +..|. .....++.        ....+...||
T Consensus       443 v~i~GDG~f----------~m~~qEL~Tavr~~lpv~ivV~NN~~yg~i~~~q-~~~~~g~~--------~~~~~~~~pD  503 (574)
T PRK06882        443 VCVTGDGSI----------QMNIQELSTAKQYDIPVVIVSLNNRFLGMVKQWQ-DLIYSGRH--------SQVYMNSLPD  503 (574)
T ss_pred             EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH-HHHCCCCC--------CCCCCCCCCC
T ss_conf             999882798----------6559999999996899589999798542999999-98608976--------7556789999


Q ss_pred             HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH
Q ss_conf             89887621489958999811412389999999997
Q gi|254780622|r  312 ILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLN  346 (405)
Q Consensus       312 IL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~  346 (405)
                      .-+ +.+--.    +-|+..++.+-++.|.++...
T Consensus       504 f~~-lA~a~G----~~g~rV~~~~eL~~al~~Al~  533 (574)
T PRK06882        504 FAK-LAEAYG----HVGIQIDTPDELEEKLTQAFS  533 (574)
T ss_pred             HHH-HHHHCC----CEEEEECCHHHHHHHHHHHHH
T ss_conf             999-999789----979997999999999999985


No 283
>PRK05884 short chain dehydrogenase; Provisional
Probab=89.25  E-value=0.73  Score=25.34  Aligned_cols=16  Identities=25%  Similarity=0.349  Sum_probs=8.6

Q ss_pred             HHHHHHHHCCCEEEEE
Q ss_conf             9999999879889998
Q gi|254780622|r   23 DLIRRLRERGAVVIPV   38 (405)
Q Consensus        23 ~l~~~L~~~g~~V~vv   38 (405)
                      .+++.|.+.|++|.++
T Consensus        15 aiA~~la~~Ga~V~i~   30 (223)
T PRK05884         15 TIAEGFRNDGHKVTLV   30 (223)
T ss_pred             HHHHHHHHCCCEEEEE
T ss_conf             9999999879999999


No 284
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=89.19  E-value=0.69  Score=25.50  Aligned_cols=36  Identities=31%  Similarity=0.426  Sum_probs=24.7

Q ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             9888556999952847899999999999987988999858
Q gi|254780622|r    1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus         1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      ++|+||+||+.=.|.+|+-|+.    .|.+.|+.|.||--
T Consensus         9 l~l~~k~vLVvGGG~VA~rK~~----~Ll~~ga~VtVvsp   44 (157)
T PRK06719          9 FNLHNKVVVIIGGGKIAYRKAS----GLKDTGAFVTVVSP   44 (157)
T ss_pred             EECCCCEEEEECCCHHHHHHHH----HHHHCCCEEEEECC
T ss_conf             9759987999889899999999----99878796999999


No 285
>PRK00143 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Reviewed
Probab=89.14  E-value=0.71  Score=25.42  Aligned_cols=33  Identities=30%  Similarity=0.358  Sum_probs=23.8

Q ss_pred             CCCCEEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             885569999528478-9999999999998798899985
Q gi|254780622|r    3 LSGKKIALIMCGSVA-VYKSLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus         3 l~~k~IllgvtGsia-a~k~~~l~~~L~~~g~~V~vv~   39 (405)
                      -+.|||++|.||++- ++    -+-+|+++|++|.-+.
T Consensus         2 ~sk~rV~VamSGGVDSsV----aA~LL~~~Gy~V~Gv~   35 (355)
T PRK00143          2 PSKKRVVVGMSGGVDSSV----AAALLKEQGYDVIGLF   35 (355)
T ss_pred             CCCCEEEEEECCCHHHHH----HHHHHHHCCCCEEEEE
T ss_conf             988889999167899999----9999997799589999


No 286
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase; InterPro: IPR005913    dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen.  dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH  ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process.
Probab=88.92  E-value=0.71  Score=25.41  Aligned_cols=66  Identities=20%  Similarity=0.323  Sum_probs=39.8

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHH
Q ss_conf             7727889999999825883899841566776567467546577899999985058887997404444
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSD  282 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSD  282 (405)
                      |+|.+|..|.+.+...|..+..+...+.++.-.......+...+.+.+ +.++..-|++|++||=-|
T Consensus         7 a~GQlG~~L~~~l~~~g~~~~~~~~~~~~~~~~~~~~~Dl~dP~~l~~-~~r~~~Pd~vvntAAYT~   72 (317)
T TIGR01214         7 ANGQLGRELVQQLSKPGRVVVALTRSTRLKLAARWSQLDLTDPEALEE-LLRAIRPDAVVNTAAYTD   72 (317)
T ss_pred             CCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHH-HHHHHCCCEEEECCHHCC
T ss_conf             875679999997078882786436877761133654406224688999-998528753762301101


No 287
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=88.77  E-value=1.5  Score=23.37  Aligned_cols=74  Identities=23%  Similarity=0.403  Sum_probs=40.0

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-------CCCCCE-EE---EEHHHH
Q ss_conf             1797789840420101021357621577278899999998258838998415667-------765674-67---546577
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-------ADPPNV-MT---IHVERA  258 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-------~~~~~~-~~---i~v~t~  258 (405)
                      +.|-.||||+|++               | -|.++|+.|...|-.|+ |+|.-..       ..|.-. .+   -.-.+-
T Consensus         3 ~tgnTiLITGG~s---------------G-IGl~lak~f~elgN~VI-i~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~   65 (245)
T COG3967           3 TTGNTILITGGAS---------------G-IGLALAKRFLELGNTVI-ICGRNEERLAEAKAENPEIHTEVCDVADRDSR   65 (245)
T ss_pred             CCCCEEEEECCCC---------------H-HHHHHHHHHHHHCCEEE-EECCCHHHHHHHHHCCCCHHEEEECCCCHHHH
T ss_conf             4476799937964---------------3-65999999998389799-96574999999986094131565132035669


Q ss_pred             HHHHHHHHHCCC-CCEEEEEHHH
Q ss_conf             899999985058-8879974044
Q gi|254780622|r  259 EDMLQEVLKALP-VDIAVMVSAV  280 (405)
Q Consensus       259 ~em~~~~~~~~~-~D~~I~aAAV  280 (405)
                      .||.+.+.+..| -+++|-+|-+
T Consensus        66 ~~lvewLkk~~P~lNvliNNAGI   88 (245)
T COG3967          66 RELVEWLKKEYPNLNVLINNAGI   88 (245)
T ss_pred             HHHHHHHHHHCCCHHEEEECCCC
T ss_conf             99999998629861134303000


No 288
>PRK07845 flavoprotein disulfide reductase; Reviewed
Probab=88.54  E-value=0.29  Score=27.96  Aligned_cols=89  Identities=22%  Similarity=0.304  Sum_probs=56.5

Q ss_pred             HHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH--HHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEE
Q ss_conf             99864000134652125531032233343455899999--998631013200179778984042010-----10213576
Q gi|254780622|r  140 EILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQ--ITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYI  212 (405)
Q Consensus       140 ~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~--~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~I  212 (405)
                      ..|++.|+.+            -.|.|++.++..+...  +.-....+....+..++++|-.|.+--     ..|..|++
T Consensus        99 ~~l~~~gv~~------------i~G~a~f~d~~~~~~~~~V~v~~~~g~~~~i~a~~iIIATGs~P~~lp~~~~dg~~~~  166 (467)
T PRK07845         99 AQLERAGVRV------------IAGRGRLDDDTPGLGPHRVKVTTADGTEEELEADVVLIATGASPRILPTAEPDGERIL  166 (467)
T ss_pred             HHHHHCCCEE------------EEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECEEEECCCCCCCCCCCCCCCCCEEE
T ss_conf             9987579689------------9738999206656778779999358975899929699958998777999788985178


Q ss_pred             ECC---------------CCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             215---------------7727889999999825883899841
Q gi|254780622|r  213 ANR---------------SSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       213 tN~---------------SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      |+.               -.|-.|.++|..+...|.+||+|.-
T Consensus       167 ts~~~~~l~~~P~~l~ViGgG~ig~E~A~~~~~lG~~Vtlv~~  209 (467)
T PRK07845        167 TWRQLYDLDELPEHLIVVGSGVTGAEFASAYTELGVKVTLVSS  209 (467)
T ss_pred             EEHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             2055317100898699989879999999999973987999995


No 289
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology.  The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.38  E-value=0.53  Score=26.21  Aligned_cols=37  Identities=35%  Similarity=0.480  Sum_probs=27.3

Q ss_pred             EEEEEEECH-HHHHHHHHHHHHHHHCCCEEEEEECHHH
Q ss_conf             699995284-7899999999999987988999858568
Q gi|254780622|r    7 KIALIMCGS-VAVYKSLDLIRRLRERGAVVIPVMTKSA   43 (405)
Q Consensus         7 ~IllgvtGs-iaa~k~~~l~~~L~~~g~~V~vv~T~~A   43 (405)
                      ||++...|. --.+-+..++++|++.|++|..+-++..
T Consensus         1 ki~i~~GGTGGHi~Palala~~L~~~g~~V~~i~~~~g   38 (350)
T cd03785           1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRG   38 (350)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH
T ss_conf             98999478589999999999999978798999987836


No 290
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated
Probab=88.26  E-value=2  Score=22.48  Aligned_cols=159  Identities=17%  Similarity=0.171  Sum_probs=90.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH--------EECCEEEEECCCCCHHHHHHH----HHHHHCC
Q ss_conf             3343455899999998631013200179778984042010--------102135762157727889999----9998258
Q gi|254780622|r  165 VGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE--------PLDPMRYIANRSSGQQGHAIA----KSLAYFG  232 (405)
Q Consensus       165 ~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E--------~ID~VR~ItN~SSGk~G~~iA----~~~~~~G  232 (405)
                      ......|..++..+.+.+        ..-.++++-+|+..        .-.|-|||+..+-|-||+++.    -.+....
T Consensus       384 ~~~~i~p~~~~~~l~~~~--------~~d~iv~~D~G~~~~~~~~~~~~~~p~~~i~~~~~G~mG~glpaAiGA~lA~p~  455 (587)
T PRK06965        384 ESEIIKPQYVVEKLWELT--------DGDAFVCSDVGQHQMWAAQFYRFNEPRRWINSGGLGTMGVGLPYAMGVKMAHPD  455 (587)
T ss_pred             CCCCCCHHHHHHHHHHHC--------CCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             767658899999999608--------998089955871378998761456897403687675400056899999985899


Q ss_pred             CCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH
Q ss_conf             83899841566776567467546577899999985058887997404444432222101123345577510455218068
Q gi|254780622|r  233 AEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI  312 (405)
Q Consensus       233 a~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI  312 (405)
                      ..|.+|.|-.+.          --|.+|+..++...++.-++|+.=.  -|-..+.. ++..  -.+..-.-.+...||.
T Consensus       456 r~Vv~i~GDGsf----------~mt~qEL~Ta~r~~lpi~iiV~NN~--~yg~ir~~-q~~~--~~~~~~~~~~~~~Pdf  520 (587)
T PRK06965        456 DDVVCITGEGSI----------QMCIQELSTCLQYDTPVKIISLNNR--YLGMVRQW-QQIE--YSKRYSHSYMDALPDF  520 (587)
T ss_pred             CCEEEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECC--CHHHHHHH-HHHH--CCCCCCCCCCCCCCCH
T ss_conf             958999884588----------7659999999996899289999587--23599999-9987--1897665577899899


Q ss_pred             HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH-CCCCE
Q ss_conf             9887621489958999811412389999999997-49989
Q gi|254780622|r  313 LKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLN-KGADF  351 (405)
Q Consensus       313 L~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~-K~~D~  351 (405)
                      .+ +.+-  ..  +-|+..++.+-++.|.++..+ ++.=.
T Consensus       521 ~~-lA~a--~G--~~g~~V~~~~eL~~al~~Al~~~~~p~  555 (587)
T PRK06965        521 VK-LAEA--YG--HVGMRIEKTSDVEPALKEALRLKDRTV  555 (587)
T ss_pred             HH-HHHH--CC--CEEEEECCHHHHHHHHHHHHHCCCCCE
T ss_conf             99-9997--79--989997999999999999986489809


No 291
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=88.21  E-value=0.42  Score=26.87  Aligned_cols=68  Identities=24%  Similarity=0.213  Sum_probs=48.1

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHC---CCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf             0322333434558999999986310---1320017977898404201010213576215772788999999982588389
Q gi|254780622|r  160 SNGYGVGRMSEPCDIIRQITWLLYK---SKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVI  236 (405)
Q Consensus       160 c~~~G~grl~e~~~I~~~~~~~~~~---~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~  236 (405)
                      +|..+..+.|+..-+..+--+.+++   ....+++||+|+|-+                 +|-.|..|+.++...|++||
T Consensus       140 TG~~~~P~iP~~~G~~~f~g~~~HS~~~~~~~~~~GKrV~VIG-----------------~GaSA~di~~~l~~~ga~vt  202 (443)
T COG2072         140 TGHLSEPYIPDFAGLDEFKGRILHSADWPNPEDLRGKRVLVIG-----------------AGASAVDIAPELAEVGASVT  202 (443)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHCCCCEEEEEC-----------------CCCCHHHHHHHHHHCCCEEE
T ss_conf             0578989788878866668634441016961342788799989-----------------87039999999973067178


Q ss_pred             EEECCCCC
Q ss_conf             98415667
Q gi|254780622|r  237 LISGPVSI  244 (405)
Q Consensus       237 li~g~~~~  244 (405)
                      +.......
T Consensus       203 ~~qRs~~~  210 (443)
T COG2072         203 LSQRSPPH  210 (443)
T ss_pred             EEECCCCC
T ss_conf             98517975


No 292
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=88.17  E-value=1  Score=24.32  Aligned_cols=38  Identities=21%  Similarity=0.161  Sum_probs=13.7

Q ss_pred             EEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHH
Q ss_conf             99952847899999999999987988999858568630698999
Q gi|254780622|r    9 ALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIV   52 (405)
Q Consensus         9 llgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l   52 (405)
                      ++|.+|-.    .-+|.+.|. .+.+|...- +....+..+..+
T Consensus         5 i~G~~GqL----G~~L~~~l~-~~~~v~a~~-~~~~Ditd~~~v   42 (281)
T COG1091           5 ITGANGQL----GTELRRALP-GEFEVIATD-RAELDITDPDAV   42 (281)
T ss_pred             EECCCCHH----HHHHHHHHC-CCCEEEECC-CCCCCCCCHHHH
T ss_conf             97698767----999999717-784399515-765555685899


No 293
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=87.90  E-value=1  Score=24.40  Aligned_cols=75  Identities=17%  Similarity=0.240  Sum_probs=48.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC-----HHEECCEEEEECC---------------CCCHHHH
Q ss_conf             2333434558999999986310132001797789840420-----1010213576215---------------7727889
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPT-----YEPLDPMRYIANR---------------SSGQQGH  222 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T-----~E~ID~VR~ItN~---------------SSGk~G~  222 (405)
                      .|.|++.++..+.-...    .+....+..++++|..|..     ..++|..|+++..               -.|-.|.
T Consensus       114 ~G~a~f~~~~~v~V~~~----dg~~~~i~a~~iIIATGs~p~~p~~~~~~~~~v~~sd~~l~l~~~Pk~vvIIGgG~ig~  189 (465)
T PRK05249        114 QGRASFVDPHTVEVECP----DGSVETLTAEKIVIATGSRPYRPDDVDFDHPRIYDSDSILSLDHLPRSLIIYGAGVIGC  189 (465)
T ss_pred             EEEEEECCCCCEEEECC----CCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCEEEEECCCCCHH
T ss_conf             84789727984044348----99628998427999537524567878989872883678543300797599999982179


Q ss_pred             HHHHHHHHCCCCEEEEECC
Q ss_conf             9999998258838998415
Q gi|254780622|r  223 AIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~g~  241 (405)
                      ++|..+...|.+||+|+..
T Consensus       190 E~A~~~~~lG~~Vtiv~~~  208 (465)
T PRK05249        190 EYASIFRGLGVKVDLINTR  208 (465)
T ss_pred             HHHHHHHHHCCEEEEEECC
T ss_conf             9999999609877897216


No 294
>KOG1208 consensus
Probab=87.61  E-value=2.2  Score=22.23  Aligned_cols=21  Identities=38%  Similarity=0.488  Sum_probs=12.8

Q ss_pred             HHHHHHHHHHHHCCCCEEEEE
Q ss_conf             788999999982588389984
Q gi|254780622|r  219 QQGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       219 k~G~~iA~~~~~~Ga~V~li~  239 (405)
                      -.|.+.|++++.+|+.|++..
T Consensus        46 GIG~eta~~La~~Ga~Vv~~~   66 (314)
T KOG1208          46 GIGFETARELALRGAHVVLAC   66 (314)
T ss_pred             CHHHHHHHHHHHCCCEEEEEE
T ss_conf             437999999995799899984


No 295
>PRK10637 cysG siroheme synthase; Provisional
Probab=87.28  E-value=2.3  Score=22.11  Aligned_cols=134  Identities=16%  Similarity=0.164  Sum_probs=69.1

Q ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98885569999528478999999999999879889998585686306989999974797582076788778774300114
Q gi|254780622|r    1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLAN   80 (405)
Q Consensus         1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~   80 (405)
                      ++|+||++|+.=.|-+|+-|...    |.+.|+.|.|+-.+-     ++. ++.+.....++...   ..+...  .|  
T Consensus         8 l~L~gk~vLVVGGG~vA~rK~~~----Ll~agA~VtViap~~-----~~~-l~~l~~~g~i~~~~---r~f~~~--dL--   70 (457)
T PRK10637          8 CQLRDRDCLIVGGGDVAERKARL----LLDAGARLTVNALAF-----IPQ-FTAWADAGMLTLVE---GPFDES--LL--   70 (457)
T ss_pred             EECCCCEEEEECCCHHHHHHHHH----HHHCCCEEEEECCCC-----CHH-HHHHHHCCCEEEEE---CCCCHH--HH--
T ss_conf             87389869998998999999999----987898799989989-----989-99998669828996---789968--83--


Q ss_pred             CCCEEEEEECCHHH-----HHHHH--CC----CCCCHHHHHHHH---CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             46557884111888-----98852--02----455214666752---279968984056600000388999999986400
Q gi|254780622|r   81 ECDLLVVAPASANF-----IAHVA--HG----MVYDLASAILLA---KGDQPVLIAPAMNFMMWAKPATQRNVEILQKDG  146 (405)
Q Consensus        81 ~aD~~iVaPaTaNt-----iaK~A--~G----iaD~llt~~~la---~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g  146 (405)
                       .+.++|.-||-|.     +++.|  .|    .+|++-.+.+..   ..+-|+.++=+-+.   .+|+.-+.++.--+  
T Consensus        71 -~g~~LViaATdd~~vn~~i~~~a~~~~ilVNvvD~p~lcdF~~PAiv~Rg~l~IAISTgG---~sP~LAr~lR~~lE--  144 (457)
T PRK10637         71 -DTCWLAIAATDDDAVNQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGG---TSPVLARLLREKLE--  144 (457)
T ss_pred             -CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEECCCEEEEEECCC---CCHHHHHHHHHHHH--
T ss_conf             -895199990699999999999999829868845882448744431573176389861589---87088999999998--


Q ss_pred             CCCCCCCHHHHH
Q ss_conf             013465212553
Q gi|254780622|r  147 CYFIGPESGAMA  158 (405)
Q Consensus       147 ~~vi~P~~g~la  158 (405)
                       ..+++..|.|+
T Consensus       145 -~~lP~~~g~la  155 (457)
T PRK10637        145 -SLLPQHLGQVA  155 (457)
T ss_pred             -HHCCHHHHHHH
T ss_conf             -65572489999


No 296
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=87.20  E-value=2.3  Score=22.08  Aligned_cols=60  Identities=22%  Similarity=0.304  Sum_probs=28.2

Q ss_pred             CEEEEECCCCCHHHHHHH----HHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             135762157727889999----9998258838998415667765674675465778999999850588879974
Q gi|254780622|r  208 PMRYIANRSSGQQGHAIA----KSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMV  277 (405)
Q Consensus       208 ~VR~ItN~SSGk~G~~iA----~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~a  277 (405)
                      |-|++++.+.|-||+.+.    -.+...+-.|.+|.|-.+.          --+.+|+..++...++.-++|+.
T Consensus       420 p~~~~~~~~~G~mG~glpaAiGA~lA~p~r~VV~i~GDG~f----------~m~~~EL~Ta~r~~lpi~~vV~N  483 (579)
T TIGR03457       420 PRKFLAPMSFGNCGYAFPTIIGAKIAAPDRPVVAYAGDGAW----------GMSMNEIMTAVRHDIPVTAVVFR  483 (579)
T ss_pred             CCEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             87165057656654557999999984899828999883787----------25299999999978692899997


No 297
>PRK06154 hypothetical protein; Provisional
Probab=87.17  E-value=2.4  Score=22.07  Aligned_cols=146  Identities=15%  Similarity=0.147  Sum_probs=75.9

Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCEEEEE-ECCC--------HHEECCEEEEECCCCCHHHHHHHH----HHHHCCCCE
Q ss_conf             455899999998631013200179778984-0420--------101021357621577278899999----998258838
Q gi|254780622|r  169 SEPCDIIRQITWLLYKSKELLLKGKRALVT-SGPT--------YEPLDPMRYIANRSSGQQGHAIAK----SLAYFGAEV  235 (405)
Q Consensus       169 ~e~~~I~~~~~~~~~~~~~~~l~gk~vlIT-aG~T--------~E~ID~VR~ItN~SSGk~G~~iA~----~~~~~Ga~V  235 (405)
                      ..|..++..+...+        ..+..+|+ -+|+        +..-.|-+|++..+.|-||+.+.-    .+...+..|
T Consensus       372 i~p~~~~~~l~~~~--------~p~d~iv~~D~G~~~~~~~~~~~~~~p~~~~~~g~~g~mG~glpaAiGa~lA~p~~~V  443 (556)
T PRK06154        372 ISPYRVVWDLQIAW--------DDRDVIITHDAGSPRDQLSPFYRARRPGSYLGWGKTTQLGYGLGLAMGAKLARPDALV  443 (556)
T ss_pred             CCHHHHHHHHHHHC--------CCCCEEEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCE
T ss_conf             49999999999963--------9998899926877699986553037888440479877445406999999973899938


Q ss_pred             EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH-HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH
Q ss_conf             99841566776567467546577899999985058887997404-44443222210112334557751045521806898
Q gi|254780622|r  236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA-VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK  314 (405)
Q Consensus       236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA-VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~  314 (405)
                      .+|.|-.+.          --+.+|+..++...++.-++|+.=. -.-|.  +.  .+....    .....+ .++|.-+
T Consensus       444 v~i~GDGsf----------~m~~qEL~Ta~r~~lpv~viV~NN~~~g~~~--~~--~~~~~~----~~~~~~-~~~Df~~  504 (556)
T PRK06154        444 ANLLGDAAF----------GECGMDFETAVRNRIPTVTILLNNGCMGGYD--KH--MPLSTT----KYRTRF-LSGDYAM  504 (556)
T ss_pred             EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCHHHHHH--HH--HHHHCC----CCCCCC-CCCCHHH
T ss_conf             999873798----------8779999999994999789999680638999--88--675067----667875-8999999


Q ss_pred             HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH
Q ss_conf             87621489958999811412389999999997
Q gi|254780622|r  315 IIGHHQCRPSIVVGFAAETQCIEQNAREKLLN  346 (405)
Q Consensus       315 ~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~  346 (405)
                       +.+--.    +-|+..++.+-++.|.++..+
T Consensus       505 -lA~a~G----~~g~~V~~~~el~~Al~~A~~  531 (556)
T PRK06154        505 -IARALG----GYTERVEDPERLVPALRRAAR  531 (556)
T ss_pred             -HHHHCC----CEEEEECCHHHHHHHHHHHHH
T ss_conf             -999779----979997999999999999985


No 298
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=86.95  E-value=2.4  Score=21.99  Aligned_cols=177  Identities=16%  Similarity=0.135  Sum_probs=94.6

Q ss_pred             CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf             68984056600000388999999986400013465212553103223334345589999999863101320017977898
Q gi|254780622|r  118 PVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALV  197 (405)
Q Consensus       118 pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlI  197 (405)
                      |.++-|--...-.+....+++++.|.+.|+.-+-+       ||-.|.+-....++-..-+......     .+|+ +-|
T Consensus         6 ~~~~TPf~~dg~iD~~~l~~~v~~l~~~Gv~gi~v-------~GstGE~~~Ls~~Er~~l~~~~~~~-----~~~~-~~v   72 (284)
T cd00950           6 TALVTPFKDDGSVDFDALERLIEFQIENGTDGLVV-------CGTTGESPTLSDEEHEAVIEAVVEA-----VNGR-VPV   72 (284)
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CEECCCHHHCCHHHHHHHHHHHHHH-----CCCC-CEE
T ss_conf             76666788786969999999999999769998996-------8435124248999999999999997-----1897-507


Q ss_pred             EECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             40420101021357621577278899999998258838998415667765674675465778999999850588879974
Q gi|254780622|r  198 TSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMV  277 (405)
Q Consensus       198 TaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~a  277 (405)
                      -+|-....+            +.-..+|+.+...||+-.++.-|..      .+ ..-+...+.++++.+..+..+++. 
T Consensus        73 i~gv~~~~t------------~~~i~~a~~A~~~Gadai~v~pP~y------~~-~s~~~l~~~~~~ia~a~~lPi~lY-  132 (284)
T cd00950          73 IAGTGSNNT------------AEAIELTKRAEKAGADAALVVTPYY------NK-PSQEGLYAHFKAIAEATDLPVILY-  132 (284)
T ss_pred             EEECCCCCH------------HHHHHHHHHHHHCCCCEEEECCCCC------CC-CCHHHHHHHHHHHHHCCCCCEEEE-
T ss_conf             750787789------------9999999999983999899626657------89-799999999999975559977987-


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             0444443222210112334557751045521806898876214899589998114123899999999974998999
Q gi|254780622|r  278 SAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIV  353 (405)
Q Consensus       278 AAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IV  353 (405)
                            -.+..        ++.   .    -+|+.+..|.++  |  -++|+|--+.++... .+-+.+.+-++-|
T Consensus       133 ------n~P~~--------tg~---~----l~~~~l~~L~~~--p--nv~giK~ss~d~~~~-~~~~~~~~~~~~v  182 (284)
T cd00950         133 ------NVPGR--------TGV---N----IEPETVLRLAEH--P--NIVGIKEATGDLDRV-SELIALCPDDFAV  182 (284)
T ss_pred             ------ECCCC--------CCC---C----CCHHHHHHHHCC--C--CEEEEECCCCCHHHH-HHHHHHCCCCCEE
T ss_conf             ------37641--------167---8----888999998479--9--989998588989999-9999866987546


No 299
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme.   Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=86.90  E-value=2.4  Score=21.97  Aligned_cols=76  Identities=18%  Similarity=0.268  Sum_probs=53.9

Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
Q ss_conf             45589999999863101320017977898404201010213576215772788999999982588389984156677656
Q gi|254780622|r  169 SEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPP  248 (405)
Q Consensus       169 ~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~  248 (405)
                      .-|..|++-+.++     ..+++||+++|-+                .|.--|.-+|.-+..+||.||+.|..+.     
T Consensus        26 cTp~ai~~ll~~~-----~i~l~Gk~vvViG----------------rS~iVG~Pla~lL~~~~atVt~chs~T~-----   79 (168)
T cd01080          26 CTPAGILELLKRY-----GIDLAGKKVVVVG----------------RSNIVGKPLAALLLNRNATVTVCHSKTK-----   79 (168)
T ss_pred             CCHHHHHHHHHHH-----CCCCCCCEEEEEC----------------CCCCCHHHHHHHHHHCCCEEEEECCCCC-----
T ss_conf             8499999999994-----9887785699987----------------8730089999999848997999768988-----


Q ss_pred             CEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
Q ss_conf             746754657789999998505888799740444443
Q gi|254780622|r  249 NVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWR  284 (405)
Q Consensus       249 ~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~  284 (405)
                                 ++.+.   ...+|++|.|+-+..|-
T Consensus        80 -----------~l~~~---~~~ADIvIsA~G~~~li  101 (168)
T cd01080          80 -----------NLKEH---TKQADIVIVAVGKPGLV  101 (168)
T ss_pred             -----------CHHHH---HHHCCEEEEECCCCCCC
T ss_conf             -----------97997---41045355415876637


No 300
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase; InterPro: IPR011294   This entry represents a subfamily of the short chain dehydrogenases. Characterised members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polymers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.; GO: 0003858 3-hydroxybutyrate dehydrogenase activity.
Probab=86.73  E-value=2.5  Score=21.92  Aligned_cols=69  Identities=13%  Similarity=0.093  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHHHHH-HCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC
Q ss_conf             03889999999864-0001346521255310322333434558999999986310132001797789840420
Q gi|254780622|r  131 AKPATQRNVEILQK-DGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPT  202 (405)
Q Consensus       131 ~~p~~~~nl~~L~~-~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T  202 (405)
                      .-|-|++++.-+.+ .|+-.=.=....+.  ...=.+|+.++++|-+.+. +|.+...+-+.|..+.|-+|=|
T Consensus       187 ~TPLV~~Qi~DqAk~rGi~eE~V~~~VmL--~~~P~k~F~~~~e~A~~a~-fLaS~~A~~~TG~~~~~DGGWt  256 (258)
T TIGR01963       187 RTPLVEKQIADQAKTRGIPEEQVIREVML--KKQPTKRFVTVDEVAETAL-FLASDAAAGITGQAIVLDGGWT  256 (258)
T ss_pred             CCHHHHHHHHHHHHHCCCCHHHHHHHHCC--CCCCCCCCCCHHHHHHHHH-HHCCHHHHCCCCEEEEECCCEE
T ss_conf             75546765899986518899888898607--8889841137999999999-8417344236620788648433


No 301
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=86.57  E-value=2.5  Score=21.86  Aligned_cols=176  Identities=17%  Similarity=0.111  Sum_probs=95.4

Q ss_pred             EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
Q ss_conf             98405660000038899999998640001346521255310322333434558999999986310132001797789840
Q gi|254780622|r  120 LIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTS  199 (405)
Q Consensus       120 ~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITa  199 (405)
                      ++-|--...-.+....+++++.|.+.|+.-+-+       ||-.|.+-....++-..-+......     .+| ++-|.+
T Consensus         9 ~~TPf~~dg~iD~~~l~~~v~~l~~~Gv~Gi~~-------~GstGE~~~Ls~~Er~~v~~~~~~~-----~~~-~~pvi~   75 (292)
T PRK03170          9 LVTPFKEDGSVDFAALRKLVDYQIANGTDGLVV-------VGTTGESPTLTHEEHEELIRAVVEA-----VNG-RVPVIA   75 (292)
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CEECCCCCCCCHHHHHHHHHHHHHH-----CCC-CCEEEE
T ss_conf             567778896959999999999999779999996-------8324141128999999999999987-----389-712884


Q ss_pred             CCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH
Q ss_conf             42010102135762157727889999999825883899841566776567467546577899999985058887997404
Q gi|254780622|r  200 GPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA  279 (405)
Q Consensus       200 G~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA  279 (405)
                      |-+..            |=+.-..+|+++...||+-.++.-|.      +.+ ..-+..-++++++.+..+..+++    
T Consensus        76 gv~~~------------~t~~~i~~a~~A~~~Gadav~v~~P~------y~~-~s~~~l~~~f~~ia~~~~~Pi~l----  132 (292)
T PRK03170         76 GTGSN------------STAEAIELTKFAEKAGADGALVVTPY------YNK-PTQEGLYQHFKAIAEATDLPIIL----  132 (292)
T ss_pred             CCCCC------------CHHHHHHHHHHHHHCCCCEEEECCCC------CCC-CCHHHHHHHHHHHHHCCCCCEEE----
T ss_conf             37876------------79999999998987599989961776------889-99999999999998635997698----


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             444432222101123345577510455218068988762148995899981141238999999999749989999
Q gi|254780622|r  280 VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVS  354 (405)
Q Consensus       280 VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVA  354 (405)
                         |-.+..        ++     .  .-+|+.+.+|.+  .|  -++|+|--+.+... ..+-+...+-++-|.
T Consensus       133 ---Yn~P~~--------tg-----~--~l~~~~l~~L~~--~~--nv~giKdss~d~~~-~~~~~~~~~~~~~v~  184 (292)
T PRK03170        133 ---YNVPGR--------TG-----V--DILPETVARLAE--HP--NIVGIKEATGDLER-VSELRELCPDDFAVY  184 (292)
T ss_pred             ---EECCCC--------CC-----C--CCCHHHHHHHHC--CC--CEEEEEECCCCHHH-HHHHHHHCCCCCEEE
T ss_conf             ---737863--------27-----6--769999999817--89--98999969999999-999998669873674


No 302
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=86.54  E-value=0.83  Score=24.97  Aligned_cols=23  Identities=30%  Similarity=0.374  Sum_probs=16.0

Q ss_pred             HHHHHHHHHHCCCEEEEEECHHHH
Q ss_conf             999999999879889998585686
Q gi|254780622|r   21 SLDLIRRLRERGAVVIPVMTKSAQ   44 (405)
Q Consensus        21 ~~~l~~~L~~~g~~V~vv~T~~A~   44 (405)
                      .-.|+.+|.+.|++|.++ |+++.
T Consensus        11 G~~L~~~L~~~gh~v~il-tR~~~   33 (297)
T COG1090          11 GRALTARLRKGGHQVTIL-TRRPP   33 (297)
T ss_pred             HHHHHHHHHHCCCEEEEE-ECCCC
T ss_conf             689999998489869999-74785


No 303
>pfam03358 FMN_red NADPH-dependent FMN reductase.
Probab=86.53  E-value=2  Score=22.53  Aligned_cols=84  Identities=21%  Similarity=0.186  Sum_probs=41.5

Q ss_pred             EEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCE
Q ss_conf             78984042010102135762157727889999999825883899841566776567467546577899999985058887
Q gi|254780622|r  194 RALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDI  273 (405)
Q Consensus       194 ~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~  273 (405)
                      ||++-.|..+         .+..|.++..++++.+...|++|.++.-. ....|...........+++.+-..+...+|.
T Consensus         2 kil~i~GS~r---------~~s~t~~l~~~~~~~l~~~g~e~~~idl~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~   71 (147)
T pfam03358         2 KILVISGSPR---------KGSNTRKLAEWAAELLEEAGAEVELIDLA-DLPLPLCDEDLEAGDPDDVQELREKIAAADG   71 (147)
T ss_pred             EEEEEECCCC---------CCCHHHHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             7999976799---------88769999999999987769925996323-3467544664565898899999999995787


Q ss_pred             EEEEHHHHHHHHHH
Q ss_conf             99740444443222
Q gi|254780622|r  274 AVMVSAVSDWRFPK  287 (405)
Q Consensus       274 ~I~aAAVSDf~~~~  287 (405)
                      +|+++-+--+.++-
T Consensus        72 iV~~sP~y~~~~~~   85 (147)
T pfam03358        72 LIIVTPEYNGSVPG   85 (147)
T ss_pred             CEEECCCCCCCCCH
T ss_conf             68806301036789


No 304
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=86.46  E-value=2.6  Score=21.82  Aligned_cols=158  Identities=16%  Similarity=0.249  Sum_probs=89.8

Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHE-------ECCEEEEECCCCCHHHHHHHHH----HHHCCCCEEE
Q ss_conf             4558999999986310132001797789840420101-------0213576215772788999999----9825883899
Q gi|254780622|r  169 SEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEP-------LDPMRYIANRSSGQQGHAIAKS----LAYFGAEVIL  237 (405)
Q Consensus       169 ~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~-------ID~VR~ItN~SSGk~G~~iA~~----~~~~Ga~V~l  237 (405)
                      ..|.+++..+.+.+        . .-++++-+|+...       -.|-|||++..-|-||+.+.-+    +......|.+
T Consensus       387 i~p~~v~~~l~~~~--------p-d~iv~~D~G~~~~w~~~~l~~~p~~~i~s~g~GsmG~glPaAiGA~lA~p~r~Vv~  457 (615)
T PRK07418        387 IYPQEVLLAVRDLA--------P-DAYYTTDVGQHQMWAAQFLRNGPRRWISSAGLGTMGFGMPAAMGVKVALPDEQVIC  457 (615)
T ss_pred             CCHHHHHHHHHHHC--------C-CCEEEECCCCHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             19999999999758--------8-87799368621688998712278712158787632578899999998489996899


Q ss_pred             EECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH----HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHH
Q ss_conf             841566776567467546577899999985058887997404----4444322221011233455775104552180689
Q gi|254780622|r  238 ISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA----VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDIL  313 (405)
Q Consensus       238 i~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA----VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL  313 (405)
                      |.|-.+.          --+.+|+..++...++.-++|+.=.    +.-|.- ......   .+..+   + ....||.-
T Consensus       458 i~GDGsf----------~mt~qEL~Ta~r~~Lpv~ivV~NN~~~G~ir~~q~-~~~~~~---~~~~~---~-~~~~pDf~  519 (615)
T PRK07418        458 IAGDASF----------LMNIQELGTLAQYGIPVKTVIINNGWQGMVRQWQE-SFYDER---YSASN---M-LPGMPDFV  519 (615)
T ss_pred             EECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH-HHCCCC---CCCCC---C-CCCCCCHH
T ss_conf             9844387----------66499999999968996899997984479999999-861887---67345---7-78999999


Q ss_pred             HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             887621489958999811412389999999997499899992057
Q gi|254780622|r  314 KIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCIL  358 (405)
Q Consensus       314 ~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i~  358 (405)
                      +. .+--.    +-|+..++.+-++.|.++....+-=.+|-=.++
T Consensus       520 ~l-A~a~G----~~g~rV~~~~eL~~Al~~Al~~~gP~lidV~vd  559 (615)
T PRK07418        520 KL-AEAFG----VKGMLISERDQLKDAIAEALAHDGPVLIDVHVR  559 (615)
T ss_pred             HH-HHHCC----CEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf             99-99779----979997999999999999980899789999988


No 305
>PRK12320 hypothetical protein; Provisional
Probab=86.15  E-value=2.7  Score=21.72  Aligned_cols=37  Identities=11%  Similarity=0.275  Sum_probs=22.3

Q ss_pred             EEEECHHHHHHHHHHHHHHHHCCCEEEEEECH------HHHHHC
Q ss_conf             99528478999999999999879889998585------686306
Q gi|254780622|r   10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK------SAQKFI   47 (405)
Q Consensus        10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~------~A~~fi   47 (405)
                      +.|||.--+. .-.+.++|.-+|++|.-|...      ++-.||
T Consensus         3 i~VT~A~G~l-GR~la~rLla~GH~V~Giar~r~~s~~~~~dFV   45 (699)
T PRK12320          3 ILVTDATGAV-GRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYV   45 (699)
T ss_pred             EEEECCCHHH-HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEE
T ss_conf             7883462156-778999998668724544047986667545554


No 306
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=85.88  E-value=0.59  Score=25.92  Aligned_cols=74  Identities=15%  Similarity=0.284  Sum_probs=50.5

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH-----HEECCEE-EEECC---------------CCCHHH
Q ss_conf             23334345589999999863101320017977898404201-----0102135-76215---------------772788
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY-----EPLDPMR-YIANR---------------SSGQQG  221 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~-----E~ID~VR-~ItN~---------------SSGk~G  221 (405)
                      .|.|++.++..+.-.     ..+....+.+++++|-.|...     +-++..+ ++++.               -.|-.|
T Consensus        96 ~G~a~f~~~~~v~V~-----~~~g~~~l~a~~ivIATGs~p~~p~ipg~~~~~~v~~s~~~~~l~~lP~~l~IiGgG~ig  170 (441)
T PRK08010         96 DGQAEFINNHSLRVH-----RPDGNLEIHGEKIFINTGAQSVVPPIPGITTTPGVYDSTGLLNLKELPGHLGILGGGYIG  170 (441)
T ss_pred             EEEEEECCCCCEEEE-----CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECHHHHHCCCCCCCEEEEECCCHHH
T ss_conf             989998579823776-----489989998258999337765455568757875398507852521169679998985899


Q ss_pred             HHHHHHHHHCCCCEEEEECC
Q ss_conf             99999998258838998415
Q gi|254780622|r  222 HAIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       222 ~~iA~~~~~~Ga~V~li~g~  241 (405)
                      .++|..+...|.+||+|...
T Consensus       171 ~E~A~~~~~lG~~Vtiie~~  190 (441)
T PRK08010        171 VEFASMFANFGSKVTILEAA  190 (441)
T ss_pred             HHHHHHHHHCCCEEEEEECC
T ss_conf             99999999759878897046


No 307
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=85.80  E-value=2.1  Score=22.44  Aligned_cols=32  Identities=16%  Similarity=0.113  Sum_probs=21.9

Q ss_pred             EEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             995284789999999999998798899985856
Q gi|254780622|r   10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus        10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      |-|.....+. .-+|++.|.+.|++|.|+....
T Consensus         3 ~~~~~~~p~q-~r~LA~~La~rGHeV~Vit~~~   34 (396)
T cd03818           3 LFVHQNFPGQ-FRHLAPALAAQGHEVVFLTEPN   34 (396)
T ss_pred             EEECCCCCHH-HHHHHHHHHHCCCEEEEEECCC
T ss_conf             9988998816-9999999997899899996899


No 308
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=85.70  E-value=0.89  Score=24.77  Aligned_cols=33  Identities=18%  Similarity=0.171  Sum_probs=21.9

Q ss_pred             CCCCEEEEEEEC--HHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             885569999528--478999999999999879889998585
Q gi|254780622|r    3 LSGKKIALIMCG--SVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         3 l~~k~IllgvtG--siaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      .+||||++.=-|  +.|      +++.|.+.|++|.+.=.+
T Consensus        10 ~~Gk~V~V~GlG~sG~a------~a~~L~~~G~~v~~~D~~   44 (487)
T PRK03369         10 TPGAPVLVAGAGVTGRA------VLAALTRFGARPTVCDDD   44 (487)
T ss_pred             CCCCEEEEEEECHHHHH------HHHHHHHCCCEEEEEECC
T ss_conf             79898999915683899------999999786979999898


No 309
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=85.39  E-value=2.9  Score=21.49  Aligned_cols=204  Identities=19%  Similarity=0.194  Sum_probs=101.2

Q ss_pred             CCCCCCEEEEEEECHHH-HHHHHHHHHHHHHC--CCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC--CCC
Q ss_conf             98885569999528478-99999999999987--98899985856863069899999747975820767887787--743
Q gi|254780622|r    1 MDLSGKKIALIMCGSVA-VYKSLDLIRRLRER--GAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYE--SNH   75 (405)
Q Consensus         1 m~l~~k~IllgvtGsia-a~k~~~l~~~L~~~--g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~--~~H   75 (405)
                      |+..-||||+.-.+++- .+-+.-+++.|+++  ++++.++..+...        +.+.++|-+.+++.......  ...
T Consensus         1 m~~~~kkILIir~~~iGD~il~tP~i~~Lk~~~P~a~I~~l~~~~~~--------~ll~~~P~id~i~~~~~k~~~~~~~   72 (352)
T PRK10422          1 MDKPFRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTI--------PILSENPEINALYGIKNKKAGASEK   72 (352)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH--------HHHHCCCCCCEEEEECCCCCCHHHH
T ss_conf             99899779997588604999999999999998899889999780479--------9983399962798866755445677


Q ss_pred             C--------CC-CCCCCEEEEEECCHH--HHHHHHCC---CC---CCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf             0--------01-144655788411188--89885202---45---52146667522799689840566000003889999
Q gi|254780622|r   76 I--------QL-ANECDLLVVAPASAN--FIAHVAHG---MV---YDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRN  138 (405)
Q Consensus        76 i--------~l-~~~aD~~iVaPaTaN--tiaK~A~G---ia---D~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~n  138 (405)
                      +        .| .+..|+.+..+-+..  .+.+++..   +.   +..-..........   ..|.-     ....+.++
T Consensus        73 ~~~~~~l~~~Lr~~~yD~vi~l~~~~~~~~l~~~~~~~~~ig~~~~~~~~~~~~~~~~~---~~~~~-----~~h~v~~~  144 (352)
T PRK10422         73 IKNFFSLIKVLRANKYDLIVNLTDQWMVALLVRLLNARVKISQDYHHRQSAFWRKSFTH---LVPLQ-----GGHVVESN  144 (352)
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCC---CCCCC-----CHHHHHHH
T ss_conf             99999999998554887788667664999999983898586566652101455655314---68875-----41599999


Q ss_pred             HHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCC
Q ss_conf             99986400013465212553103223334345589999999863101320017977898404201010213576215772
Q gi|254780622|r  139 VEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSG  218 (405)
Q Consensus       139 l~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSG  218 (405)
                      +..|+..|..-..++            ..+.-+++-...+...+.   ...+.++-|+|--|++..    -|....    
T Consensus       145 l~ll~~l~~~~~~~~------------~~l~~~~~~~~~~~~~l~---~~~~~~~~ivi~pga~~~----~K~Wp~----  201 (352)
T PRK10422        145 LSVLTPLGLSSLVKE------------TTMSYRPESWKRMRRQLD---HLGVTQNYVVIQPTARQI----FKCWDN----  201 (352)
T ss_pred             HHHHHHCCCCCCCCC------------CCCCCCHHHHHHHHHHHH---HCCCCCCEEEEECCCCCC----CCCCCH----
T ss_conf             999864699866755------------566788789999998767---448889879996789985----677999----


Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             7889999999825883899841566
Q gi|254780622|r  219 QQGHAIAKSLAYFGAEVILISGPVS  243 (405)
Q Consensus       219 k~G~~iA~~~~~~Ga~V~li~g~~~  243 (405)
                      ..=.++++.+..+|.+|.++-||..
T Consensus       202 e~~a~l~~~L~~~g~~vvl~ggp~~  226 (352)
T PRK10422        202 DKFSAVIDALQARGYEVVLTSGPAK  226 (352)
T ss_pred             HHHHHHHHHHHHCCCEEEEECCCCH
T ss_conf             9999999999847991999728988


No 310
>PRK13748 putative mercuric reductase; Provisional
Probab=85.39  E-value=1.7  Score=23.04  Aligned_cols=75  Identities=19%  Similarity=0.334  Sum_probs=53.4

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECCC---------------CCHHHH
Q ss_conf             233343455899999998631013200179778984042010-----102135762157---------------727889
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANRS---------------SGQQGH  222 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~S---------------SGk~G~  222 (405)
                      .|.||+.++..+.-...    .+..+.+..++++|-.|..--     -+|..+|+||..               +|-.|.
T Consensus       208 ~G~A~f~~~~tv~V~~~----dg~~~~i~a~~iIIATGS~P~~P~ipGl~~~~~lTSd~~l~l~~lP~~l~IIGgG~IG~  283 (561)
T PRK13748        208 HGEARFKDDQTLIVRLN----DGGERVVAFDRCLIATGASPAVPPIPGLKETPYWTSTEALASDTIPERLAVIGSSVVAL  283 (561)
T ss_pred             EEEEEEECCCEEEEEEC----CCCEEEEEECEEEECCCCCCCCCCCCCCCCCCEECCHHHHCCCCCCCEEEEECCCHHHH
T ss_conf             84999953988999935----89648994186999478876678888767786277456407443887389989868999


Q ss_pred             HHHHHHHHCCCCEEEEECC
Q ss_conf             9999998258838998415
Q gi|254780622|r  223 AIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~g~  241 (405)
                      ++|..+...|.+||++.-+
T Consensus       284 E~A~~f~~lGs~VTiv~r~  302 (561)
T PRK13748        284 ELAQAFARLGSKVTILARS  302 (561)
T ss_pred             HHHHHHHHCCCEEEEEECC
T ss_conf             9999998649848999657


No 311
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=85.36  E-value=2.9  Score=21.48  Aligned_cols=158  Identities=18%  Similarity=0.195  Sum_probs=90.2

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHE--------ECCEEEEECCCCCHHHHHHH----HHHHHCCCC
Q ss_conf             434558999999986310132001797789840420101--------02135762157727889999----999825883
Q gi|254780622|r  167 RMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEP--------LDPMRYIANRSSGQQGHAIA----KSLAYFGAE  234 (405)
Q Consensus       167 rl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~--------ID~VR~ItN~SSGk~G~~iA----~~~~~~Ga~  234 (405)
                      ....|..++..+.+.+        ...-++++-+|+...        -.|-||+++.+.|-||+.+.    -.+...+-.
T Consensus       364 ~~i~p~~~~~~l~~~l--------~~~~ii~~D~G~~~~~~~~~~~~~~p~~~~~~~~~G~mG~~lpaAiGa~lA~p~r~  435 (560)
T PRK08527        364 EVLKPQWVIERCAKLL--------GDDAIITTDVGQHQMWVAQFYPFNRPRQLATSGGLGTMGYGLPAALGAKLAVPEKV  435 (560)
T ss_pred             CCCCHHHHHHHHHHHC--------CCCCEEEECCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf             7729899999999767--------99848995587226889873335788757547886677871389999887489996


Q ss_pred             EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH-HHCCC-CCCCCCCCCEEEEEECHHH
Q ss_conf             899841566776567467546577899999985058887997404444432222-10112-3345577510455218068
Q gi|254780622|r  235 VILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKI-AGTKI-KRKDIGDTMRIDLMENPDI  312 (405)
Q Consensus       235 V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~-~~~Ki-kk~s~~~~l~L~L~~~pdI  312 (405)
                      |.+|.|-.+.          --+.+|+..++...++.-++|+.=.-  |-.... ..... ++...     ..+..+||.
T Consensus       436 vv~i~GDG~f----------~m~~~EL~Ta~r~~lpv~ivV~NN~~--~g~i~~~q~~~~~~~~~~-----~d~~~~pdf  498 (560)
T PRK08527        436 VINFTGDGSI----------LMNIQELMTAVEYGIPVINIILNNNF--LGMVRQWQTFFYEERYSQ-----TDLSTQPDF  498 (560)
T ss_pred             EEEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCC--CHHHHHHHHHHCCCCCCC-----CCCCCCCCH
T ss_conf             8999781798----------66599999999968895899996995--189999999861888776-----788899899


Q ss_pred             HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             988762148995899981141238999999999749989999
Q gi|254780622|r  313 LKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVS  354 (405)
Q Consensus       313 L~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVA  354 (405)
                      .+ +.+-  ..  +-|+..+|.+-++.|.++..+.+.=.+|-
T Consensus       499 ~~-~A~a--~G--~~g~~V~~~~el~~Al~~a~~~~~p~lIe  535 (560)
T PRK08527        499 VK-LAEG--FG--GIGFRVTTKEEFDKALKQALKSDKVSLID  535 (560)
T ss_pred             HH-HHHH--CC--CEEEEECCHHHHHHHHHHHHHCCCCEEEE
T ss_conf             99-9997--89--98999699999999999998189939999


No 312
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=85.18  E-value=2  Score=22.50  Aligned_cols=35  Identities=34%  Similarity=0.436  Sum_probs=27.3

Q ss_pred             EEEEEEE--CHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             6999952--84789999999999998798899985856
Q gi|254780622|r    7 KIALIMC--GSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus         7 ~Illgvt--Gsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      |||..++  ||+.-| ..+|++.|.+.|++|.++....
T Consensus         1 kil~i~~~~GG~e~~-~~~La~~L~~~Gh~V~vit~~~   37 (359)
T cd03808           1 KILHIVTVDGGLYSF-RLPLIKALRAAGYEVHVVAPPG   37 (359)
T ss_pred             CEEEEECCCCHHHHH-HHHHHHHHHHCCCEEEEEEECC
T ss_conf             989997587659999-9999999997699999997079


No 313
>PRK08655 prephenate dehydrogenase; Provisional
Probab=85.17  E-value=1  Score=24.45  Aligned_cols=78  Identities=22%  Similarity=0.251  Sum_probs=42.4

Q ss_pred             EEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             99952847899999999999987988999858568630698999997479758207678877877430011446557884
Q gi|254780622|r    9 ALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDLLVVA   88 (405)
Q Consensus         9 llgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~~iVa   88 (405)
                      ++|=+|...    --+++.|++.|++|.+ .+++-.+   ....+..-|-...           ..-.++..|+|+++|+
T Consensus         5 IIGG~G~MG----~~Fa~~f~~sGyeV~I-~gRd~~k---~~~va~~LGv~~~-----------~~~~e~~~~advVIvs   65 (441)
T PRK08655          5 IIGGTGGLG----KWFARFLKDKGYEVIV-WGRDPKK---GKEVAKELGVEYA-----------SDNIDAAKDGDIVIVS   65 (441)
T ss_pred             EEECCCHHH----HHHHHHHHHCCCEEEE-EECCCCH---HHHHHHHHCCCCC-----------CCHHHHHHCCCEEEEE
T ss_conf             994798177----9999999867988999-8157313---5678887386222-----------4478897249999998


Q ss_pred             -E--CCHHHHHHHHCCCCCC
Q ss_conf             -1--1188898852024552
Q gi|254780622|r   89 -P--ASANFIAHVAHGMVYD  105 (405)
Q Consensus        89 -P--aTaNtiaK~A~GiaD~  105 (405)
                       |  +|..++.++|--...+
T Consensus        66 VPI~~T~~VI~~laP~l~~~   85 (441)
T PRK08655         66 VPINVTEDVIREVAPHVKEG   85 (441)
T ss_pred             CCHHHHHHHHHHHHCCCCCC
T ss_conf             48899999999974248999


No 314
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=85.15  E-value=0.89  Score=24.79  Aligned_cols=41  Identities=20%  Similarity=0.225  Sum_probs=30.1

Q ss_pred             EEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEECHHHHHHC
Q ss_conf             69999528478-999999999999879889998585686306
Q gi|254780622|r    7 KIALIMCGSVA-VYKSLDLIRRLRERGAVVIPVMTKSAQKFI   47 (405)
Q Consensus         7 ~IllgvtGsia-a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi   47 (405)
                      |||+...|+-- .+-...|+++|+++|++|.++-++....++
T Consensus         2 ril~~~~~~~GH~~P~l~lA~~L~~rGh~Vt~~~~~~~~~~i   43 (401)
T cd03784           2 RVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLV   43 (401)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH
T ss_conf             799987985758999999999999889959999387888899


No 315
>KOG1014 consensus
Probab=85.14  E-value=2.4  Score=22.05  Aligned_cols=99  Identities=21%  Similarity=0.296  Sum_probs=61.8

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCCCCC--EE--EEEHHHHHHHHHHHHHCC---CCCEEEEEHHH
Q ss_conf             7727889999999825883899841566--------776567--46--754657789999998505---88879974044
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAEVILISGPVS--------IADPPN--VM--TIHVERAEDMLQEVLKAL---PVDIAVMVSAV  280 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~~~~--~~--~i~v~t~~em~~~~~~~~---~~D~~I~aAAV  280 (405)
                      +|..-|.+.|+++++||.+|.||+-.-+        +..-..  ++  .+++...++-++++++.+   +..++|=++..
T Consensus        57 aTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgILVNNvG~  136 (312)
T KOG1014          57 ATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGILVNNVGM  136 (312)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             88852299999999759879999688899999999998875807999998648981568999988627864899965531


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH
Q ss_conf             444322221011233455775104552180689887
Q gi|254780622|r  281 SDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII  316 (405)
Q Consensus       281 SDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i  316 (405)
                      +-..|...  .|++..+..+.+++...+...+-+.+
T Consensus       137 ~~~~P~~f--~~~~~~~~~~ii~vN~~~~~~~t~~i  170 (312)
T KOG1014         137 SYDYPESF--LKYPEGELQNIINVNILSVTLLTQLI  170 (312)
T ss_pred             CCCCCHHH--HHCCHHHHHHEEEEECCHHHHHHHHH
T ss_conf             67883778--73855645314677432689999885


No 316
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=84.95  E-value=2  Score=22.46  Aligned_cols=72  Identities=17%  Similarity=0.160  Sum_probs=39.6

Q ss_pred             CCCCCEEE-EEEECH-HHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88855699-995284-7899999999999987988999858568630698999997479758207678877877430011
Q gi|254780622|r    2 DLSGKKIA-LIMCGS-VAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLA   79 (405)
Q Consensus         2 ~l~~k~Il-lgvtGs-iaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~   79 (405)
                      +-+-|||. +|++|+ +++     |++.|.+.|++|.  .|+......+. .|+.+ |-+++.   +    ...+.   -
T Consensus         5 ~~~~k~ih~iGigG~Gmsa-----lA~~l~~~G~~V~--gsD~~~~~~~~-~L~~~-Gi~v~~---g----~~~~~---l   65 (459)
T PRK00421          5 PRRIKRIHFVGIGGIGMSG-----LAEVLLNLGYKVS--GSDLKESAVTQ-RLLEL-GAIIFI---G----HDAEN---I   65 (459)
T ss_pred             CCCCCEEEEEEECHHHHHH-----HHHHHHHCCCEEE--EECCCCCHHHH-HHHHC-CCEEEC---C----CCHHH---C
T ss_conf             6567889999866888999-----9999996899399--98898997899-99978-799977---9----89798---7


Q ss_pred             CCCCEEEEEECCH
Q ss_conf             4465578841118
Q gi|254780622|r   80 NECDLLVVAPASA   92 (405)
Q Consensus        80 ~~aD~~iVaPaTa   92 (405)
                      ..+|++|+-|+-.
T Consensus        66 ~~~d~vV~Sp~I~   78 (459)
T PRK00421         66 KGADVVVVSSAIK   78 (459)
T ss_pred             CCCCEEEECCCCC
T ss_conf             9999999899859


No 317
>TIGR03452 mycothione_red mycothione reductase. Mycothiol, a glutathione analog in Mycobacterium tuberculosis and related species, can form a disulfide-linked dimer called mycothione. This enzyme can reduce mycothione to regenerate two mycothiol molecules. The enzyme shows some sequence similarity to glutathione-disulfide reductase, trypanothione-disulfide reductase, and dihydrolipoamide dehydrogenase. The characterized protein from M. tuberculosis, a homodimer, has FAD as a cofactor, one per monomer, and uses NADPH as a substrate.
Probab=84.89  E-value=2  Score=22.52  Aligned_cols=74  Identities=16%  Similarity=0.249  Sum_probs=53.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECCC---------------CCHHH
Q ss_conf             2233343455899999998631013200179778984042010-----102135762157---------------72788
Q gi|254780622|r  162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANRS---------------SGQQG  221 (405)
Q Consensus       162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~S---------------SGk~G  221 (405)
                      -.|.|++.++..+..      .  ....+..++++|-.|..--     .+|.++|+||..               .|--|
T Consensus       110 ~~G~a~f~~~~tv~v------~--~g~~~~a~~iiIATGs~P~~p~~~~~~~~~~~ts~~~l~l~~lP~~l~IiGgG~Ig  181 (452)
T TIGR03452       110 YDGHARFVGPRTLRT------G--DGEEITGDQIVIAAGSRPYIPPAIADSGVRYHTNEDIMRLPELPESLVIVGGGYIA  181 (452)
T ss_pred             EEEEEEECCCCEEEC------C--CCCEEEECEEEECCCCCCCCCCCCCCCCCEEECCHHHHCCHHCCCEEEEECCCHHH
T ss_conf             998999937857981------8--98789846699937998878887677898686556554330058669998886899


Q ss_pred             HHHHHHHHHCCCCEEEEECCCC
Q ss_conf             9999999825883899841566
Q gi|254780622|r  222 HAIAKSLAYFGAEVILISGPVS  243 (405)
Q Consensus       222 ~~iA~~~~~~Ga~V~li~g~~~  243 (405)
                      .++|..+...|.+||+|...-.
T Consensus       182 ~E~A~~~~~lG~~Vtlie~~~~  203 (452)
T TIGR03452       182 AEFAHVFSALGTRVTIVNRSTK  203 (452)
T ss_pred             HHHHHHHHHCCCEEEEEEECCC
T ss_conf             9999999961994999996762


No 318
>PRK07168 bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase; Reviewed
Probab=84.78  E-value=3.1  Score=21.31  Aligned_cols=218  Identities=18%  Similarity=0.201  Sum_probs=97.3

Q ss_pred             CCCCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCC-----CCC---CCCCCCCCCC
Q ss_conf             88556999952847899-99999999998798899985856863069899999747975-----820---7678877877
Q gi|254780622|r    3 LSGKKIALIMCGSVAVY-KSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRV-----YTH---LLSYKEGYES   73 (405)
Q Consensus         3 l~~k~IllgvtGsiaa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v-----~~~---~~~~~~~~~~   73 (405)
                      .+||+|+=-.+|--..+ +..+=+..|.++|.++.+|.==+|-     .+-....|-|+     -..   .++.......
T Consensus        78 ~~Gk~VVRLKgGDP~VFGRggEE~~aL~~aGI~fEVVPGVTSa-----~AapAyAGIPLThR~~a~sv~vvTGh~~~~~~  152 (474)
T PRK07168         78 KEGKIVVRLKGGDPSIFGRVGEEAETLAAANIPYEIVPGITSS-----IAASSYAGIPLTHRNYSNSVTLLTGHAKGPLT  152 (474)
T ss_pred             HCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHH-----HHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC
T ss_conf             7799299973789853013599999999879967996796578-----89999759976668856439999603789976


Q ss_pred             CCCCC--CCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEC---CCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             43001--144655788411188898852024552146667522799689840---5660000038899999998640001
Q gi|254780622|r   74 NHIQL--ANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAP---AMNFMMWAKPATQRNVEILQKDGCY  148 (405)
Q Consensus        74 ~Hi~l--~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaP---aMn~~M~~~p~~~~nl~~L~~~g~~  148 (405)
                      .+...  ....+-+++ -+....+..++..+-+.     =+ ....|+.+.=   --++..+.  .|.+++....+. ..
T Consensus       153 d~~~~~~~~~~~TLV~-~MGv~~L~~I~~~Li~~-----G~-~~dTPVAVV~~GTt~~Qrtv~--gTL~~Ia~~v~~-~~  222 (474)
T PRK07168        153 DHGKYNSSHNSDTIAY-YMGIKNLPTICKNLRQA-----GK-KEDTPVAVIEWGTTGKQRVVT--GTLSTIVSIVKN-EN  222 (474)
T ss_pred             CHHHHHHHCCCCCEEE-EECHHHHHHHHHHHHHC-----CC-CCCCCEEEEECCCCCCCEEEE--EEHHHHHHHHHH-CC
T ss_conf             5344997177994899-91464699999999966-----99-999828999768975728999--999999999997-37


Q ss_pred             CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHH
Q ss_conf             34652125531032233343455899999998631013200179778984042010102135762157727889999999
Q gi|254780622|r  149 FIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSL  228 (405)
Q Consensus       149 vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~  228 (405)
                      +-.|..        .=.|.-..-.+   ...|.    ...+|-|++||||-                 +-.+...+++.+
T Consensus       223 i~~PAv--------IVVGeVV~lR~---~L~Wf----E~kPLfG~rVLVtR-----------------treQA~~ls~~L  270 (474)
T PRK07168        223 ISNPSM--------TIVGDVVSLRN---QIAWK----ERKPLHGKKVLFTS-----------------ATNKTSVMKQKL  270 (474)
T ss_pred             CCCCEE--------EEECCCCCCCC---CCCCC----CCCCCCCCEEEECC-----------------CHHHHHHHHHHH
T ss_conf             899829--------99884005555---36753----56887886799778-----------------667769999999


Q ss_pred             HHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH
Q ss_conf             825883899841566776567467546577899999985058887997404
Q gi|254780622|r  229 AYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA  279 (405)
Q Consensus       229 ~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA  279 (405)
                      ...||+|.-+-.   +         +.+...++.+++.+...||.+|++.+
T Consensus       271 ~~~GA~v~E~Pt---I---------~~~~~~~~~~~i~~l~~ydwlvFTS~  309 (474)
T PRK07168        271 QEAGAEIYQIPT---F---------KKEEYTLTLEQINEIFNVDRLVFCSA  309 (474)
T ss_pred             HHCCCCEEEECC---C---------CCCCCCHHHHHHHHHCCCCEEEEECH
T ss_conf             976993899445---3---------16885637999875333898999387


No 319
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=84.70  E-value=1.3  Score=23.68  Aligned_cols=32  Identities=16%  Similarity=0.079  Sum_probs=19.3

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             569999528478999999999999879889998585
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      +||.+.=+|.+-+    .++-.+-++|++|.++=..
T Consensus         3 ~~VaViGaG~mG~----giA~~~a~~G~~V~l~D~~   34 (308)
T PRK06129          3 GSIAIVGAGLIGR----AWAIVFARAGHRVRLWDAD   34 (308)
T ss_pred             CEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC
T ss_conf             8799977789999----9999998589938999898


No 320
>pfam03807 F420_oxidored NADP oxidoreductase coenzyme F420-dependent.
Probab=84.54  E-value=0.49  Score=26.47  Aligned_cols=26  Identities=38%  Similarity=0.598  Sum_probs=22.1

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             77278899999998258838998415
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~V~li~g~  241 (405)
                      -+|.||.+|+..+.+.|+++.++..+
T Consensus         6 G~G~mg~ai~~~l~~~g~~~~~~~~r   31 (93)
T pfam03807         6 GAGNMGEALARGLAAAGHEVIIANSR   31 (93)
T ss_pred             CCHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             70099999999999779961278648


No 321
>pfam05221 AdoHcyase S-adenosyl-L-homocysteine hydrolase.
Probab=84.49  E-value=3.2  Score=21.23  Aligned_cols=182  Identities=22%  Similarity=0.221  Sum_probs=92.5

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH-HHHHHCCHHHHHHH--HCCCCCCCC--------------
Q ss_conf             8885569999528478999999999999879889998585-68630698999997--479758207--------------
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK-SAQKFITPLIVGAI--SNRRVYTHL--------------   64 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~-~A~~fi~~~~l~~l--t~~~v~~~~--------------   64 (405)
                      +|+|.||..++-=   --|+.-|++.|+..|++|...-+. -++   .+..-++|  .|-+|+-..              
T Consensus        40 Pl~G~rI~~~lHl---e~kTA~L~~tL~~~GA~V~~~~~NplST---QDdvaAaL~~~Gi~VfA~~g~t~eey~~~~~~~  113 (430)
T pfam05221        40 PLKGARIAGCLHM---TVQTAVLIETLVALGAEVRWASCNIFST---QDHAAAAIAAAGVPVFAWKGETLEEYWWCIERA  113 (430)
T ss_pred             CCCCCEEEEEEEC---HHHHHHHHHHHHHCCCEEEEECCCCCCC---CHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
T ss_conf             9999889999831---7999999999998598799965897532---379999999679769993799989999999998


Q ss_pred             CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             67887787743001144655788411188898852024552146667--5227996898405660000038899999998
Q gi|254780622|r   65 LSYKEGYESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEIL  142 (405)
Q Consensus        65 ~~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L  142 (405)
                      .+|.. ...|||-+-.=+|+..+.-....-+.+--.|.+.---|.+.  .+-.+.-.+-+|+|+.|  +. .++.     
T Consensus       114 L~~~~-~~~P~iiiDDG~Dl~~~~h~~~~~l~~~i~G~~EETTTGv~RL~am~~~g~L~fPviaVN--Da-~tK~-----  184 (430)
T pfam05221       114 LTFKD-GQGPNMILDDGGDATLLIHKKYPQYLAGIRGVSEETTTGVHRLYKMLKKGKLLFPAINVN--DS-VTKS-----  184 (430)
T ss_pred             HCCCC-CCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEC--CH-HHHH-----
T ss_conf             46588-989656542541252207856288886516715321478998788986596064179967--66-6513-----


Q ss_pred             HHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHH
Q ss_conf             64000134652125531032233343455899999998631013200179778984042010102135762157727889
Q gi|254780622|r  143 QKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGH  222 (405)
Q Consensus       143 ~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~  222 (405)
                                    +. =+.+|.|     ...++.+.+.-    ...+.||+|+|-+=                 |--|.
T Consensus       185 --------------~F-DNrYGtg-----qS~~dgi~r~T----n~liaGK~vVV~GY-----------------G~cGk  223 (430)
T pfam05221       185 --------------KF-DNLYGCR-----ESLPDGIKRAT----DVMIAGKVAVVCGY-----------------GDVGK  223 (430)
T ss_pred             --------------HH-CCCCCCH-----HHHHHHHHHHH----CCEECCCEEEEECC-----------------CCCCH
T ss_conf             --------------40-1343312-----30999999861----71342767999556-----------------75357


Q ss_pred             HHHHHHHHCCCCEEEEE
Q ss_conf             99999982588389984
Q gi|254780622|r  223 AIAKSLAYFGAEVILIS  239 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~  239 (405)
                      -+|..+.-.||.|++.-
T Consensus       224 G~A~r~rglGA~V~VtE  240 (430)
T pfam05221       224 GCAASLRGQGARVIVTE  240 (430)
T ss_pred             HHHHHHHHCCCEEEEEC
T ss_conf             89999842798899954


No 322
>PRK05976 dihydrolipoamide dehydrogenase; Validated
Probab=84.16  E-value=1.8  Score=22.85  Aligned_cols=73  Identities=19%  Similarity=0.307  Sum_probs=45.5

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEE-----CCEEEEECC---------------CCCHHHH
Q ss_conf             23334345589999999863101320017977898404201010-----213576215---------------7727889
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPL-----DPMRYIANR---------------SSGQQGH  222 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~I-----D~VR~ItN~---------------SSGk~G~  222 (405)
                      .|.|++.++..+.-..    ..+....+..++++|-.|..--.+     | -+++|+.               -.|-.|.
T Consensus       114 ~G~a~f~~~~~v~V~~----~~g~~~~i~a~~iIIATGs~P~~lp~~~~~-~~~~ts~~~~~l~~~Pk~v~ViGgG~ig~  188 (464)
T PRK05976        114 HGIGRILDGKTVSVET----ATGENEMIIPENLLIATGSRPVELPGLPFG-GEVISSTEALSLETLPKSLVVVGGGYIGL  188 (464)
T ss_pred             EEEEEECCCCCEEEEC----CCCCCEEEEECEEEECCCCCCCCCCCCCCC-CCEECCHHHHCCCCCCCEEEEECCCHHHH
T ss_conf             7268865898114442----788736998266998768886169976577-66782046317354895599989968999


Q ss_pred             HHHHHHHHCCCCEEEEEC
Q ss_conf             999999825883899841
Q gi|254780622|r  223 AIAKSLAYFGAEVILISG  240 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~g  240 (405)
                      ++|..+.+.|.+||+|.-
T Consensus       189 E~A~~~~~lG~~Vtii~~  206 (464)
T PRK05976        189 EWGSMLRKFGVEVTVVEA  206 (464)
T ss_pred             HHHHHHHHCCCEEEEEEE
T ss_conf             999999953986999985


No 323
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=83.71  E-value=3.4  Score=21.02  Aligned_cols=74  Identities=23%  Similarity=0.246  Sum_probs=39.0

Q ss_pred             CCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8855699-995284789999999999998798899985856863069899999747975820767887787743001144
Q gi|254780622|r    3 LSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANE   81 (405)
Q Consensus         3 l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~   81 (405)
                      |+||||+ +|...|-     .-+++.|.+.|++|.+.=.....++  ....+.+....+.... +...   .++   -..
T Consensus        12 l~~kkv~i~GlG~sG-----~a~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~l~~~gi~~~~-g~~~---~~~---~~~   77 (458)
T PRK01710         12 IKNKKVAVVGIGVSN-----IPLIKFLVKLGAKVTAFDKKSEEEL--GEISLELKEKGVNLEL-GENY---LDK---LTG   77 (458)
T ss_pred             HCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEECCCCHHH--HHHHHHHHHCCCEEEE-CCCH---HHH---CCC
T ss_conf             789969999787889-----9999999978897999989884314--8999999857998995-7840---542---378


Q ss_pred             CCEEEEEEC
Q ss_conf             655788411
Q gi|254780622|r   82 CDLLVVAPA   90 (405)
Q Consensus        82 aD~~iVaPa   90 (405)
                      +|++|+.|.
T Consensus        78 ~d~vv~SPg   86 (458)
T PRK01710         78 FDVIFKTPS   86 (458)
T ss_pred             CCEEEECCC
T ss_conf             888998998


No 324
>TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase; InterPro: IPR010233   This entry represents an O-methyltransferase, which is believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and mitochondria (COQ3) , . A separate methylase (MenG/UbiE) catalyses the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase.; GO: 0008425 2-polyprenyl-6-methoxy-14-benzoquinone methyltransferase activity, 0006744 ubiquinone biosynthetic process.
Probab=83.56  E-value=1.3  Score=23.77  Aligned_cols=39  Identities=15%  Similarity=0.201  Sum_probs=20.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECC
Q ss_conf             333434558999999986310132001797789840420101021
Q gi|254780622|r  164 GVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDP  208 (405)
Q Consensus       164 G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~  208 (405)
                      -..|+..|++|...+..-      .+=.|.+|.=+.|=++.||-.
T Consensus       224 ~~~KFi~P~EL~~~l~d~------N~~~~l~~~~~~G~~YnP~~~  262 (275)
T TIGR01983       224 DWEKFIKPSELTSWLEDD------NRSAGLRVKDVKGLVYNPIKN  262 (275)
T ss_pred             CCCCCCCHHHHHHHHHHC------CCCCCEEEEEECCEEEEECCC
T ss_conf             710153879999998512------646764899750507630138


No 325
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=83.40  E-value=2.3  Score=22.09  Aligned_cols=36  Identities=31%  Similarity=0.317  Sum_probs=24.7

Q ss_pred             CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             855699995284789999999999998798899985856
Q gi|254780622|r    4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus         4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      +.+||+++.||++--   ---+-.|+++|++|.-+.=+.
T Consensus         2 ~~~kV~v~mSGGVDS---SVaA~lLk~QGyeViGl~m~~   37 (356)
T COG0482           2 KKKKVLVGMSGGVDS---SVAAYLLKEQGYEVIGLFMKN   37 (356)
T ss_pred             CCCEEEEECCCCHHH---HHHHHHHHHCCCEEEEEEEEE
T ss_conf             876799990577789---999999997697499999996


No 326
>cd03132 GATase1_catalase Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases. Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases. Catalase catalyzes the dismutation of hydrogen peroxide (H2O2) to water and oxygen. This group includes the large catalases: Neurospora crassa Catalase-1 and Catalase-3 and, Escherichia coli HP-II.  This GATase1-like domain has an essential role in HP-II catalase activity.  However, it lacks enzymatic activity and the catalytic triad typical of GATase1 domains. Catalase-1 and -3 are homotetrameric, HP-II is homohexameric. It has been proposed that this domain may facilitate the folding and oligomerization process. The interface between this GATase1-like domain of HP-II and the core of the subunit forms part of a channel which provides access to the deeply buried catalase active sites of HPII.  Catalase-1 is associated with non-growing cells; C
Probab=83.32  E-value=3.3  Score=21.09  Aligned_cols=102  Identities=17%  Similarity=0.217  Sum_probs=59.0

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf             55699995284789999999999998798899985856863069899999747975820767887787743001144655
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDL   84 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~   84 (405)
                      ||||.+.++-+........+...|+++|+.|.+|-+..+. +.      .-.|..+-.+.+ ....       -+..+|+
T Consensus         1 grkVaiLv~dg~~~~e~~~~~~al~~aG~~v~via~~~g~-v~------~~~g~~~~vd~t-~~~~-------~s~~fDA   65 (142)
T cd03132           1 GRKVGILVADGVDAAELSALKAALKAAGANVKVVAPTLGG-VV------DSDGKTLEVDQT-YAGA-------PSVLFDA   65 (142)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC-EE------CCCCCEEECCEE-ECCC-------CHHHCCE
T ss_conf             9889999669988899999999999889989999579870-77------589988805443-5368-------9647136


Q ss_pred             EEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEC
Q ss_conf             788411188898852024552146667522799689840
Q gi|254780622|r   85 LVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAP  123 (405)
Q Consensus        85 ~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaP  123 (405)
                      ++|..-..+.-.-..+|-+-..+.-..  ...|||-...
T Consensus        66 vvipgG~~~~~~L~~~~~~~~fv~eay--~h~KpI~a~~  102 (142)
T cd03132          66 VVVPGGAEAAFALAPSGRALHFVTEAF--KHGKPIGAVG  102 (142)
T ss_pred             EEECCCCCCHHHHCCCHHHHHHHHHHH--HCCCEEEEEC
T ss_conf             884388779888644867999999999--7699799937


No 327
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated
Probab=83.20  E-value=3.6  Score=20.89  Aligned_cols=155  Identities=17%  Similarity=0.205  Sum_probs=86.2

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-------EE-CCEEEEECCCCCHHHHHHH----HHHHHCCCCE
Q ss_conf             3455899999998631013200179778984042010-------10-2135762157727889999----9998258838
Q gi|254780622|r  168 MSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-------PL-DPMRYIANRSSGQQGHAIA----KSLAYFGAEV  235 (405)
Q Consensus       168 l~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-------~I-D~VR~ItN~SSGk~G~~iA----~~~~~~Ga~V  235 (405)
                      -..|..++..+.+.+        .+.-++++-+|+..       ++ .|-||+++.+.|-||+.+.    -.+......|
T Consensus       371 ~i~p~~~~~~l~~~~--------~~d~iv~~D~G~~~~~~~~~~~~~~p~~~~~~~~~GsmG~~lpaAIGA~lA~p~~~V  442 (574)
T PRK07979        371 KIKPQAVIETLWRLT--------KGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETV  442 (574)
T ss_pred             CCCHHHHHHHHHHHC--------CCCEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf             768899999888617--------997299965884399999866656898053488873112206899999985899978


Q ss_pred             EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH
Q ss_conf             99841566776567467546577899999985058887997404444432222101123345577510455218068988
Q gi|254780622|r  236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI  315 (405)
Q Consensus       236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~  315 (405)
                      .+|.|-.+.          --+.+|+..++...++.-++|+.=-  -|-..+..+...  .. +....-.+...||..+ 
T Consensus       443 v~i~GDG~f----------~m~~qEL~Ta~r~~lpi~iiV~NN~--~yg~ir~~q~~~--~~-g~~~~~~~~~~pDf~~-  506 (574)
T PRK07979        443 VCVTGDGSI----------QMNIQELSTALQYELPVLVLNLNNR--YLGMVKQWQDMI--YS-GRHSQSYMQSLPDFVR-  506 (574)
T ss_pred             EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHH--CC-CCCCCCCCCCCCCHHH-
T ss_conf             999781587----------6419999999995899289999587--046999999986--18-8767456689999999-


Q ss_pred             HHHCCCCCCEEEEEECCCCHHHHHHHHHH-HHCCCC
Q ss_conf             76214899589998114123899999999-974998
Q gi|254780622|r  316 IGHHQCRPSIVVGFAAETQCIEQNAREKL-LNKGAD  350 (405)
Q Consensus       316 i~~~k~~~~~lVGFkaET~~l~~~A~~Kl-~~K~~D  350 (405)
                      +.+-  ..  +-|+..|+.+-++.|.++- ...+.+
T Consensus       507 lA~a--~G--~~g~~v~~~~el~~al~~Al~~~~~~  538 (574)
T PRK07979        507 LAEA--YG--HVGIQISHPDELESKLSEALEQVRNN  538 (574)
T ss_pred             HHHH--CC--CEEEEECCHHHHHHHHHHHHHCCCCC
T ss_conf             9997--79--97999789999999999998423799


No 328
>TIGR01136 cysKM cysteine synthases; InterPro: IPR005856    This model discriminates cysteine synthases (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded.    Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=83.13  E-value=1.1  Score=24.17  Aligned_cols=56  Identities=18%  Similarity=0.305  Sum_probs=40.1

Q ss_pred             CCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC-C-CCCH
Q ss_conf             65578841118889885202455214666752279968984056600000388999999986400013-4-6521
Q gi|254780622|r   82 CDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYF-I-GPES  154 (405)
Q Consensus        82 aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~v-i-~P~~  154 (405)
                      .+-.||=|.|.||      ||+   |..++.+.+- ++++  .|..+|     .+|=-+.|+.+|..+ + +|+.
T Consensus        61 ~G~~iiEaTSGNT------GIa---LAMvAAarGY-kliL--~MPetm-----S~ERr~~l~ayGA~L~LT~~~~  118 (315)
T TIGR01136        61 PGTTIIEATSGNT------GIA---LAMVAAARGY-KLIL--TMPETM-----SLERRKLLKAYGAELILTPAEE  118 (315)
T ss_pred             CCCEEEECCCCCH------HHH---HHHHHHHCCC-CEEE--ECCCCH-----HHHHHHHHHHCCCEEEEECCCC
T ss_conf             8888984277844------899---9999986199-1899--858871-----7899999987096698837335


No 329
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, 
Probab=83.10  E-value=3.6  Score=20.86  Aligned_cols=105  Identities=23%  Similarity=0.290  Sum_probs=64.2

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCCEEEEEHHHHHHHHH
Q ss_conf             0179778984042010102135762157727889999999825883899841566-----77656746754657789999
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-----IADPPNVMTIHVERAEDMLQ  263 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-----~~~~~~~~~i~v~t~~em~~  263 (405)
                      +|.+++|||-+                 +|.||...++++..+|+.-..|+..+.     +...-+.+.+.   .+++.+
T Consensus       175 ~l~~~~vLviG-----------------aGem~~l~~~~L~~~g~~~i~v~nRt~~ra~~la~~~g~~~~~---~~~l~~  234 (311)
T cd05213         175 NLKGKKVLVIG-----------------AGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVP---LDELLE  234 (311)
T ss_pred             CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEEC---HHHHHH
T ss_conf             72116799986-----------------8799999999999659982599768678999999974989972---999999


Q ss_pred             HHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH
Q ss_conf             9985058887997404444432222101123345577510455218068988762
Q gi|254780622|r  264 EVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH  318 (405)
Q Consensus       264 ~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~  318 (405)
                      .+.   .+|++|.|.+-.+|......-.|  +......+-+.|---.||=..++.
T Consensus       235 ~l~---~~DvvisaT~s~~~~~~~~~~~~--~~~~~~~~iiDLavPRdid~~v~~  284 (311)
T cd05213         235 LLN---EADVVISATGAPHYAKIVERAMK--KRSGKPRLIVDLAVPRDIEPEVGE  284 (311)
T ss_pred             HHH---HCCEEEEECCCCCCHHHHHHHHH--HCCCCCEEEEEECCCCCCCHHHCC
T ss_conf             997---68999992799962035999975--347997699991799987733477


No 330
>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional
Probab=82.98  E-value=3.6  Score=20.90  Aligned_cols=39  Identities=15%  Similarity=0.256  Sum_probs=25.5

Q ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHHHHHC--CCEEEEEE
Q ss_conf             9888556999952847899999999999987--98899985
Q gi|254780622|r    1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRER--GAVVIPVM   39 (405)
Q Consensus         1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~--g~~V~vv~   39 (405)
                      |-+.|+||+||||||.--.=..+++..|+..  |.++.++-
T Consensus         9 ~~~~~~~ilvavSGG~DS~~LL~~L~~l~~~~~~~~l~~~H   49 (433)
T PRK10660          9 QLLESRQILVAFSGGLDSTVLLHQLVQWRTQNPGVTLRAIH   49 (433)
T ss_pred             HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             46999989999728099999999999999866898289999


No 331
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=82.74  E-value=2.3  Score=22.15  Aligned_cols=81  Identities=26%  Similarity=0.321  Sum_probs=51.9

Q ss_pred             CEEEEEEECHHH--HHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC-CCC--CCCCCC
Q ss_conf             569999528478--999999999999879889998585686306989999974797582076788778-774--300114
Q gi|254780622|r    6 KKIALIMCGSVA--VYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGY-ESN--HIQLAN   80 (405)
Q Consensus         6 k~IllgvtGsia--a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~-~~~--Hi~l~~   80 (405)
                      ++|+++-++|-+  .-=+.-|+|.|++.|..|+++  +.+-.||.|.-.+.+||.+++. ++.|--.. .+.  ...-++
T Consensus         1 ~~vvIAg~~SG~GKTTvT~glm~aL~~rg~~Vqpf--KvGPDYIDP~~H~~atG~~srN-LD~~mm~~~~v~~~f~~~~~   77 (451)
T COG1797           1 PAVVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPF--KVGPDYIDPGYHTAATGRPSRN-LDSWMMGEEGVRALFARAAA   77 (451)
T ss_pred             CCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCHHHHHHHCCCCCC-CCHHHCCHHHHHHHHHHHCC
T ss_conf             93599548888858999999999998668721665--5687863813566763885677-76544699899999998627


Q ss_pred             CCCEEEEEE
Q ss_conf             465578841
Q gi|254780622|r   81 ECDLLVVAP   89 (405)
Q Consensus        81 ~aD~~iVaP   89 (405)
                      .+|+.||=-
T Consensus        78 ~adi~vIEG   86 (451)
T COG1797          78 DADIAVIEG   86 (451)
T ss_pred             CCCEEEEEE
T ss_conf             898799961


No 332
>PRK07092 benzoylformate decarboxylase; Reviewed
Probab=82.57  E-value=3.8  Score=20.73  Aligned_cols=11  Identities=27%  Similarity=0.631  Sum_probs=5.9

Q ss_pred             HCCCCEEEEEC
Q ss_conf             25883899841
Q gi|254780622|r  230 YFGAEVILISG  240 (405)
Q Consensus       230 ~~Ga~V~li~g  240 (405)
                      ...+|+.+.-|
T Consensus       261 l~~aDlvl~lG  271 (521)
T PRK07092        261 LDGHDLVLVIG  271 (521)
T ss_pred             HHHCCEEEEEC
T ss_conf             85289999968


No 333
>pfam01210 NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus. NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain.
Probab=82.55  E-value=3.7  Score=20.83  Aligned_cols=25  Identities=44%  Similarity=0.454  Sum_probs=18.3

Q ss_pred             CCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             5772788999999982588389984
Q gi|254780622|r  215 RSSGQQGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       215 ~SSGk~G~~iA~~~~~~Ga~V~li~  239 (405)
                      ...|.+|.+||..+...|++|+++.
T Consensus         6 iGaG~wGtAla~~la~n~~~V~l~~   30 (159)
T pfam01210         6 LGAGSWGTALAKVLARNGHEVRLWG   30 (159)
T ss_pred             ECCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf             9969999999999998799899999


No 334
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated
Probab=82.16  E-value=3.2  Score=21.22  Aligned_cols=74  Identities=16%  Similarity=0.316  Sum_probs=50.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH-----HEECCEEEEECC---------------CCCHHHH
Q ss_conf             23334345589999999863101320017977898404201-----010213576215---------------7727889
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY-----EPLDPMRYIANR---------------SSGQQGH  222 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~-----E~ID~VR~ItN~---------------SSGk~G~  222 (405)
                      .|.|++.++..+.-.     ..+++..+..++++|-.|...     .++|..+++++.               -.|-.|.
T Consensus       109 ~G~a~f~~~~~v~V~-----~~~~~~~i~a~~iiIATGs~P~~~p~~~~d~~~~~~s~~~~~l~~lP~~l~IiGgG~ig~  183 (458)
T PRK06912        109 QGKASFETDHRVRVE-----YGGKEEVVDAEQFIIATGSEPTELPFAPFDGKWILNSSHAMSLPSIPKSLLIVGGGVIGC  183 (458)
T ss_pred             ECEEEEECCCEEEEE-----CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCEEEEECCCHHHH
T ss_conf             152798038868998-----699618997418999889877469978878876984655406122796599989974799


Q ss_pred             HHHHHHHHCCCCEEEEECC
Q ss_conf             9999998258838998415
Q gi|254780622|r  223 AIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~g~  241 (405)
                      ++|..+...|.+||+|...
T Consensus       184 E~A~~~~~~G~~Vtiv~~~  202 (458)
T PRK06912        184 EFASIYSRLGTKVTIVEMA  202 (458)
T ss_pred             HHHHHHHHCCCEEEEEEEC
T ss_conf             9999999659879999844


No 335
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional
Probab=81.16  E-value=2.5  Score=21.87  Aligned_cols=55  Identities=22%  Similarity=0.289  Sum_probs=41.8

Q ss_pred             CEEEEEEECHHH--HHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCC
Q ss_conf             569999528478--999999999999879889998585686306989999974797582
Q gi|254780622|r    6 KKIALIMCGSVA--VYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYT   62 (405)
Q Consensus         6 k~IllgvtGsia--a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~   62 (405)
                      |.|++.-+.|-+  ..=+.-|++.|++.|..|++.  +..-.||.|.-++.++|++++.
T Consensus         2 kgilIAa~~SgsGKTtvt~gL~~aL~~rG~~Vq~F--K~GPDYIDP~~h~~a~G~~~~N   58 (432)
T PRK13896          2 DGVVLAGTSSGVGKTVATLAVLQALADAGYDVQPA--KAGPDFIDPSHHEAVVDTPSRS   58 (432)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCHHHHHHHHCCCCCC
T ss_conf             62899778999989999999999999784963766--6684751989999996898446


No 336
>PRK06292 dihydrolipoamide dehydrogenase; Validated
Probab=81.10  E-value=4.3  Score=20.40  Aligned_cols=52  Identities=17%  Similarity=0.291  Sum_probs=35.9

Q ss_pred             CCCCCEEEEEECCCH------HEECCEEEEECC---------------CCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             017977898404201------010213576215---------------7727889999999825883899841
Q gi|254780622|r  189 LLKGKRALVTSGPTY------EPLDPMRYIANR---------------SSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       189 ~l~gk~vlITaG~T~------E~ID~VR~ItN~---------------SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      .+..++|+|-.|...      +.+|..+++|+.               -.|-.|.++|..+...|.+||+|.-
T Consensus       128 ~i~a~~vIIATGs~~~~iPg~~~~~~~~~~t~~~~~~~~~~pk~v~VIGgG~ig~E~A~~l~~~G~~Vtvv~~  200 (460)
T PRK06292        128 EIEAKNIVIATGSRPPVIPGSWLILGDRLITSDDAFELDDLPKSLAVIGGGVIGLELGQALSRLGVKVTVFER  200 (460)
T ss_pred             EEEECEEEEECCCCCCCCCCCCCCCCCCEEECHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             9961589996089999999841248872894644533555885699999867887999999846986999962


No 337
>pfam03054 tRNA_Me_trans tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs.
Probab=81.06  E-value=2.3  Score=22.17  Aligned_cols=29  Identities=34%  Similarity=0.448  Sum_probs=20.6

Q ss_pred             EEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             69999528478-9999999999998798899985
Q gi|254780622|r    7 KIALIMCGSVA-VYKSLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus         7 ~IllgvtGsia-a~k~~~l~~~L~~~g~~V~vv~   39 (405)
                      ||++|.||++- ++    -+-.|+++|++|.-+.
T Consensus         2 kV~VamSGGVDSsV----aA~LL~~~Gy~V~Gv~   31 (354)
T pfam03054         2 KVVVAMSGGVDSSV----AAYLLKEQGYEVIGVF   31 (354)
T ss_pred             EEEEEECCCHHHHH----HHHHHHHCCCCEEEEE
T ss_conf             69999047899999----9999997799639999


No 338
>TIGR01289 LPOR light-dependent protochlorophyllide reductase; InterPro: IPR005979    This family contains the light-dependent, NADPH-dependent form of protochlorophyllide reductase (1.3.1.33 from EC) which catalyses the reaction  chlorophyllide A + NADP+ = protochlorophyllide + NADPH.  The enzyme belongs to the short chain alcohol dehydrogenase family. ; GO: 0016630 protochlorophyllide reductase activity, 0015995 chlorophyll biosynthetic process, 0019685 photosynthesis dark reaction, 0009507 chloroplast.
Probab=81.04  E-value=4.3  Score=20.38  Aligned_cols=71  Identities=25%  Similarity=0.329  Sum_probs=46.6

Q ss_pred             EEEECCCCCHHHHHHHHHHHHCC-CCEEEEECCC--------CCC-CCCCEEEEEH-----HHHHHHHHHHHHCC-CCCE
Q ss_conf             57621577278899999998258-8389984156--------677-6567467546-----57789999998505-8887
Q gi|254780622|r  210 RYIANRSSGQQGHAIAKSLAYFG-AEVILISGPV--------SIA-DPPNVMTIHV-----ERAEDMLQEVLKAL-PVDI  273 (405)
Q Consensus       210 R~ItN~SSGk~G~~iA~~~~~~G-a~V~li~g~~--------~~~-~~~~~~~i~v-----~t~~em~~~~~~~~-~~D~  273 (405)
                      =.||-.||| .|..-|+++..+| ..|..-+-..        ++. +..++.+++.     +|....-+.-.+.- +-|+
T Consensus         6 viITGASSG-~GL~~AKAL~~~G~WHV~MACR~l~Ka~~aA~~~G~p~~sYti~~lDL~~LdSVR~FV~~Fr~~gr~Lda   84 (321)
T TIGR01289         6 VIITGASSG-LGLYAAKALAETGKWHVVMACRDLLKAEKAAKSLGMPKDSYTILHLDLGSLDSVRQFVEQFRESGRPLDA   84 (321)
T ss_pred             EEEECCCHH-HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             788637313-5789999998639808998144616889999843888666135430134467899999999860784201


Q ss_pred             EEEEHHHH
Q ss_conf             99740444
Q gi|254780622|r  274 AVMVSAVS  281 (405)
Q Consensus       274 ~I~aAAVS  281 (405)
                      +|+.|||-
T Consensus        85 LVCNAAVy   92 (321)
T TIGR01289        85 LVCNAAVY   92 (321)
T ss_pred             EEEHHHHH
T ss_conf             34213452


No 339
>TIGR00420 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; InterPro: IPR004506 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (2.1.1.61 from EC) catalyses the addition of 5-methylaminomethyl-2-thiouridylate to tRNAs using S-adenosyl-L-methionine as a substrate and releasing S-adenosyl-L-homocysteine. The enzyme is cytoplasmic and is involved in tRNA processing.; GO: 0004808 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, 0008033 tRNA processing, 0005737 cytoplasm.
Probab=80.98  E-value=2.6  Score=21.77  Aligned_cols=29  Identities=34%  Similarity=0.558  Sum_probs=22.4

Q ss_pred             CEEEEEEECHH----HHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             56999952847----8999999999999879889998585
Q gi|254780622|r    6 KKIALIMCGSV----AVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         6 k~IllgvtGsi----aa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      ++|.||.|||+    |||       .|+++|.+|..|.=+
T Consensus         1 ~kv~VglSGGVDSSVsA~-------lL~~qg~~v~G~ylk   33 (394)
T TIGR00420         1 KKVIVGLSGGVDSSVSAY-------LLKQQGYEVVGVYLK   33 (394)
T ss_pred             CEEEEECCCCHHHHHHHH-------HHHHCCCEEEEEEEE
T ss_conf             948998068547899999-------997149658999877


No 340
>PRK09414 glutamate dehydrogenase; Provisional
Probab=80.52  E-value=4.5  Score=20.27  Aligned_cols=53  Identities=19%  Similarity=0.228  Sum_probs=39.8

Q ss_pred             CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEEEEEH
Q ss_conf             32001797789840420101021357621577278899999998258838998415-66776567467546
Q gi|254780622|r  186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP-VSIADPPNVMTIHV  255 (405)
Q Consensus       186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~-~~~~~~~~~~~i~v  255 (405)
                      ....|+||+|+|.+                 +|.-|...|+.+...|+.|.-++.. ..+-.|.|+..-.+
T Consensus       223 ~g~~l~gk~v~IqG-----------------fGNVg~~aA~~l~e~GakvVavSDs~G~Iy~~~Gid~~~L  276 (446)
T PRK09414        223 RGDSFEGKTVVVSG-----------------SGNVAIYAIEKAMELGAKVVTCSDSSGYVYDEDGITPEKL  276 (446)
T ss_pred             CCCCCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHH
T ss_conf             49995788799977-----------------7779999999999769979999837860788999899999


No 341
>PRK06835 DNA replication protein DnaC; Validated
Probab=80.47  E-value=2  Score=22.58  Aligned_cols=73  Identities=16%  Similarity=0.266  Sum_probs=41.1

Q ss_pred             EECCCCCHH--HHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEE----EHHHHHHHH
Q ss_conf             621577278--89999999825883899841566776567467546577899999985058887997----404444432
Q gi|254780622|r  212 IANRSSGQQ--GHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVM----VSAVSDWRF  285 (405)
Q Consensus       212 ItN~SSGk~--G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~----aAAVSDf~~  285 (405)
                      .++..+|||  ..+||+++..+|+.|.+++.+-=+........-.-.+..++++.+   ..+|++|.    +=..++|..
T Consensus       189 ~G~~G~GKTfLa~~IA~ell~~g~sViy~ta~~L~~~l~~~~~~~~~~~~~~~~~l---~~~DLLIIDDLG~E~~t~~~~  265 (330)
T PRK06835        189 YGNTGTGKTFLSNCIAKELLDRGKTVIYRTSDELIENLREIRFNNDNDAPELEDLL---INCDLLIIDDLGTESITEFSK  265 (330)
T ss_pred             ECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHH---HHCCEEEEECCCCCCCCHHHH
T ss_conf             89999988999999999999879949996299999999997545764489999999---618989972103455886899


Q ss_pred             HH
Q ss_conf             22
Q gi|254780622|r  286 PK  287 (405)
Q Consensus       286 ~~  287 (405)
                      ..
T Consensus       266 ~~  267 (330)
T PRK06835        266 TE  267 (330)
T ss_pred             HH
T ss_conf             99


No 342
>PRK08268 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=80.00  E-value=2.6  Score=21.74  Aligned_cols=32  Identities=16%  Similarity=0.290  Sum_probs=19.6

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             569999528478999999999999879889998585
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      |||.+.=+|.+-.    .++..+.+.|++|.++=..
T Consensus         4 ~~VaViGaGtMG~----gIA~~~a~aG~~V~l~D~~   35 (503)
T PRK08268          4 ATVAVIGAGAMGA----GIAQVAAQAGHTVLLYDAR   35 (503)
T ss_pred             CEEEEECCCHHHH----HHHHHHHHCCCEEEEEECC
T ss_conf             7899979688999----9999999389908999799


No 343
>KOG1209 consensus
Probab=79.78  E-value=4.7  Score=20.12  Aligned_cols=18  Identities=17%  Similarity=0.329  Sum_probs=13.0

Q ss_pred             HHHHHHHHHHCCCEEEEE
Q ss_conf             999999999879889998
Q gi|254780622|r   21 SLDLIRRLRERGAVVIPV   38 (405)
Q Consensus        21 ~~~l~~~L~~~g~~V~vv   38 (405)
                      .-.|.+++.+.|+.|...
T Consensus        21 G~ala~ef~~~G~~V~At   38 (289)
T KOG1209          21 GYALAKEFARNGYLVYAT   38 (289)
T ss_pred             HHHHHHHHHHCCEEEEEE
T ss_conf             499999998678199997


No 344
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase; InterPro: IPR011286   This entry describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (IPR002198 from INTERPRO). This protein has been characterised in Erwinia chrysanthemi as an enzyme of pectin degradation .; GO: 0008678 2-deoxy-D-gluconate 3-dehydrogenase activity, 0051287 NAD binding.
Probab=79.78  E-value=3.7  Score=20.82  Aligned_cols=62  Identities=26%  Similarity=0.415  Sum_probs=33.5

Q ss_pred             CCHHH--HHHHHHHHHCCCCEEEEE-CCCCCCCCCCEEEEEHHHHHHHH-HHHHHCCC-------CC----EEEEEHHHH
Q ss_conf             72788--999999982588389984-15667765674675465778999-99985058-------88----799740444
Q gi|254780622|r  217 SGQQG--HAIAKSLAYFGAEVILIS-GPVSIADPPNVMTIHVERAEDML-QEVLKALP-------VD----IAVMVSAVS  281 (405)
Q Consensus       217 SGk~G--~~iA~~~~~~Ga~V~li~-g~~~~~~~~~~~~i~v~t~~em~-~~~~~~~~-------~D----~~I~aAAVS  281 (405)
                      +|-||  ..||.|...+|-+|-=|+ |...-....   .+   -+|+-. +++++-.|       .|    +++.++.-|
T Consensus       159 ~~v~GlTk~lAnEWa~~ginVNAIAPGY~~T~NT~---~l---RaD~~Rn~~Il~RIPaGrWG~p~D~~G~aVFLaS~AS  232 (249)
T TIGR01832       159 HGVAGLTKLLANEWAAKGINVNAIAPGYMETNNTQ---AL---RADEDRNAAILERIPAGRWGTPEDLGGAAVFLASSAS  232 (249)
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCH---HH---CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             77777899999899873881531158876645515---42---0317778999731789998484000306888877554


Q ss_pred             HHH
Q ss_conf             443
Q gi|254780622|r  282 DWR  284 (405)
Q Consensus       282 Df~  284 (405)
                      ||.
T Consensus       233 dYv  235 (249)
T TIGR01832       233 DYV  235 (249)
T ss_pred             HHH
T ss_conf             343


No 345
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=79.73  E-value=2.7  Score=21.65  Aligned_cols=37  Identities=19%  Similarity=0.282  Sum_probs=22.6

Q ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             98885569999528478999999999999879889998585
Q gi|254780622|r    1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      |+=.=|+|.+.=+|-+-+    .++-.+-.+|++|.++=..
T Consensus         1 M~~~Ik~VaViGAG~MG~----gIA~~~a~~G~~V~l~D~~   37 (310)
T PRK06130          1 MDNPIQNLAIIGAGAMGS----GIAALFASKGLDVVLIDPM   37 (310)
T ss_pred             CCCCCCEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC
T ss_conf             989988898978779999----9999998589988999799


No 346
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=79.47  E-value=2.2  Score=22.20  Aligned_cols=143  Identities=18%  Similarity=0.245  Sum_probs=81.3

Q ss_pred             CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---CCCCEEEEEHHHHHHHH
Q ss_conf             320017977898404201010213576215772788999999982588389984156677---65674675465778999
Q gi|254780622|r  186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---DPPNVMTIHVERAEDML  262 (405)
Q Consensus       186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---~~~~~~~i~v~t~~em~  262 (405)
                      .+..+-|-+++|++-                 |+.|..+|+.|...||+|+...-.....   .-.+.+.+..   +++.
T Consensus       146 tp~ti~gs~~lVlG~-----------------Gr~G~~lA~~l~~lGA~V~V~aR~~~~~a~a~~~G~~~v~~---~~L~  205 (296)
T PRK08306        146 TPITIHGSNVLVLGF-----------------GRTGMTLARTLKALGAKVKVGARKSAHLARITEMGYSPVHL---SELA  205 (296)
T ss_pred             CCCCCCCCCEEEECC-----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEH---HHHH
T ss_conf             996324765899898-----------------68999999999977996999979999999999769858719---9999


Q ss_pred             HHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCC-HHHHHHH
Q ss_conf             999850588879974044444322221011233455775104552180689887621489958999811412-3899999
Q gi|254780622|r  263 QEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQ-CIEQNAR  341 (405)
Q Consensus       263 ~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~-~l~~~A~  341 (405)
                      +.+   .++|++|-+.      |.                   ++-+.++|+.+    .++.++|-.+-..+ ...+.|+
T Consensus       206 ~~~---~~~D~i~NTI------Pa-------------------~Vlt~~~l~~~----~~~avIIDLAS~PGG~Df~~A~  253 (296)
T PRK08306        206 EEV---GEADIIFNTI------PA-------------------LVLTKNVLSKM----PPHALIIDLASKPGGTDFEYAK  253 (296)
T ss_pred             HHH---CCCCEEEECC------CH-------------------HHCCHHHHHCC----CCCCEEEEECCCCCCCCHHHHH
T ss_conf             773---5699999898------52-------------------54399999418----9996999947799973889999


Q ss_pred             HHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             999974998999920577677777661189998369859727899899999999999998517
Q gi|254780622|r  342 EKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVADRLCHLIVEHLGM  404 (405)
Q Consensus       342 ~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA~~Il~~i~~~L~~  404 (405)
                      +    .|.-.+.|=.+-                   | ..-|+-+=+.+|+-|.+.|.+.+.+
T Consensus       254 ~----~Gika~lapgLP-------------------G-k~APkTag~Ila~~i~~ll~e~~~~  292 (296)
T PRK08306        254 K----LGIKALLAPGLP-------------------G-KVAPKTAGQILANVLSNLLAEDLIE  292 (296)
T ss_pred             H----HCCEEEECCCCC-------------------C-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8----398599728999-------------------7-3171539999999999999999986


No 347
>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional
Probab=79.23  E-value=2.7  Score=21.73  Aligned_cols=31  Identities=42%  Similarity=0.484  Sum_probs=20.3

Q ss_pred             CCCCCEEE-EEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             01797789-8404201010213576215772788999999982588389984
Q gi|254780622|r  189 LLKGKRAL-VTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       189 ~l~gk~vl-ITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~  239 (405)
                      +|+|++|| |=.|+.                    .+++.+.+.||+||=|-
T Consensus        46 ~l~G~~ILDVGCGgG--------------------~lse~LAr~Ga~VtGID   77 (233)
T PRK05134         46 GLFGKRVLDVGCGGG--------------------ILSESMARLGATVTGID   77 (233)
T ss_pred             CCCCCEEEEECCCCC--------------------HHHHHHHHCCCEEEEEC
T ss_conf             668998999755897--------------------11289996799799987


No 348
>PRK06327 dihydrolipoamide dehydrogenase; Validated
Probab=79.03  E-value=4.6  Score=20.17  Aligned_cols=52  Identities=23%  Similarity=0.453  Sum_probs=40.9

Q ss_pred             CCCCCEEEEEECCCHH-----EECCEEEEECC---------------CCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             0179778984042010-----10213576215---------------7727889999999825883899841
Q gi|254780622|r  189 LLKGKRALVTSGPTYE-----PLDPMRYIANR---------------SSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E-----~ID~VR~ItN~---------------SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      .+..++++|-.|.+.-     ++|..+++++.               -.|-.|.+.|..+.+.|.+||+|..
T Consensus       143 ~i~a~~iiIATGs~p~~lp~~~~~~~~~~ts~~~~~l~~~Pk~~~ViGgG~ig~E~A~~~~~lG~~Vtli~~  214 (475)
T PRK06327        143 VVKAKNVIIATGSEPRHLPGVPFDNEIILDNEGALNFTEVPKKLAVIGAGVIGLELGSVWRRLGAEVTILEA  214 (475)
T ss_pred             EEEECEEEECCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             999687999789966669988878743873676516133896799996747589999999954985999985


No 349
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating); InterPro: IPR004849   This family resembles a larger family of bacterial and eukaryotic 6-phosphogluconate dehydrogenases (Gnd) but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain Gnd, and in Aquifex aeolicus. .
Probab=78.76  E-value=1.3  Score=23.82  Aligned_cols=131  Identities=18%  Similarity=0.237  Sum_probs=65.6

Q ss_pred             HHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHH
Q ss_conf             999999987988999858568630698999997479758---20767887787743001144655788411188898852
Q gi|254780622|r   23 DLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVY---THLLSYKEGYESNHIQLANECDLLVVAPASANFIAHVA   99 (405)
Q Consensus        23 ~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~---~~~~~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A   99 (405)
                      .++++|++.||+|.+.=...       .+.+.+.|..--   +.+.+.....++|       -=+=|..|+|-       
T Consensus        15 ni~~rl~~rgh~~vgYd~~q-------~av~~~kG~d~~~gv~nl~E~~~~l~~P-------r~vWvMVPhgn-------   73 (341)
T TIGR00872        15 NIAKRLADRGHEVVGYDRDQ-------AAVEELKGEDRAEGVANLKELLKRLSAP-------RVVWVMVPHGN-------   73 (341)
T ss_pred             HHHHHHHHCCCEEEEECCCH-------HHHHHHHCCCCCCCCHHHHHHHHCCCCC-------CEEEEECCCCH-------
T ss_conf             99999852794699853887-------9999972011343001247888417999-------58998628736-------


Q ss_pred             CCCCCCHHHHH--HHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHCCCCCCCCCCCH-HHHH
Q ss_conf             02455214666--752279968984056600000388999999986400013465-2125531032233343455-8999
Q gi|254780622|r  100 HGMVYDLASAI--LLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGP-ESGAMAESNGYGVGRMSEP-CDII  175 (405)
Q Consensus       100 ~GiaD~llt~~--~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P-~~g~la~c~~~G~grl~e~-~~I~  175 (405)
                        |.|..|..+  +|...  -+|| -+=|+.-=   =-+|.-++|++.|+++++- .+|.+. .-+.|.-=|.=- ++..
T Consensus        74 --ivdaVl~~l~p~L~kG--D~vI-dgGNsyYk---ds~Rry~~lke~gih~LD~GtSGG~~-G~~~G~cfMiGGD~eaf  144 (341)
T TIGR00872        74 --IVDAVLRELAPLLEKG--DIVI-DGGNSYYK---DSLRRYKELKEKGIHYLDVGTSGGVL-GKERGYCFMIGGDEEAF  144 (341)
T ss_pred             --HHHHHHHHHHHHHHCC--CEEE-ECCCCCCH---HHHHHHHHHHHHCCCEEECCCCCCCC-CCCCCCEEEECCCHHHH
T ss_conf             --7999999766676408--8898-27865123---34788876887187565345457723-04464147751847999


Q ss_pred             HHHHHHHH
Q ss_conf             99998631
Q gi|254780622|r  176 RQITWLLY  183 (405)
Q Consensus       176 ~~~~~~~~  183 (405)
                      ...+.+|.
T Consensus       145 ~~~EplF~  152 (341)
T TIGR00872       145 KKAEPLFK  152 (341)
T ss_pred             HHHCHHHH
T ss_conf             76221443


No 350
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=78.65  E-value=5.1  Score=19.89  Aligned_cols=46  Identities=30%  Similarity=0.460  Sum_probs=38.1

Q ss_pred             CEEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHH
Q ss_conf             569999528478-9999999999998798899985856863069899
Q gi|254780622|r    6 KKIALIMCGSVA-VYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLI   51 (405)
Q Consensus         6 k~IllgvtGsia-a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~   51 (405)
                      +||++.++|+-. ...+.-|.++|++.|++|+..-++...+|+...-
T Consensus         2 mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~ag   48 (406)
T COG1819           2 MKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAAG   48 (406)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHC
T ss_conf             57999817764322666999999997697499973778999999836


No 351
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=78.58  E-value=2.3  Score=22.16  Aligned_cols=62  Identities=24%  Similarity=0.303  Sum_probs=33.4

Q ss_pred             CCCCCHHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCCEEEEEHH-HHHHHHHHHHHCCCCCEEEEE
Q ss_conf             157727889999999825883899841566-----7765674675465-778999999850588879974
Q gi|254780622|r  214 NRSSGQQGHAIAKSLAYFGAEVILISGPVS-----IADPPNVMTIHVE-RAEDMLQEVLKALPVDIAVMV  277 (405)
Q Consensus       214 N~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-----~~~~~~~~~i~v~-t~~em~~~~~~~~~~D~~I~a  277 (405)
                      =..-|+.|+.+|+.+ .+|++|++|--...     ....+...++.-. |..+.+.+. ..-.+|++|.+
T Consensus       237 I~Ggg~ig~~la~~L-~~~~~v~iIe~d~~~~~~la~~l~~~~Vi~GD~td~~~L~e~-gi~~aD~~ia~  304 (455)
T PRK09496        237 IAGGGNIGLYLAKLL-EKGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEE-GIDEADAFIAL  304 (455)
T ss_pred             EECCCHHHHHHHHHH-HCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHH-CCCCCCEEEEE
T ss_conf             987869999999987-408838997089899999997478539997887688999763-64556489990


No 352
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=78.48  E-value=3.1  Score=21.29  Aligned_cols=33  Identities=15%  Similarity=0.059  Sum_probs=20.3

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             5569999528478999999999999879889998585
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      =|+|.+.=+|.+-+    .++-.+-.+|++|.++=..
T Consensus         3 i~~VaViGaG~MG~----gIA~~~a~~G~~V~l~D~~   35 (288)
T PRK08293          3 IKKVTVAGAGVLGS----QIAFQTAFKGFDVTIYDIS   35 (288)
T ss_pred             CCEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC
T ss_conf             57899989788999----9999999579928999898


No 353
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=78.46  E-value=3.1  Score=21.30  Aligned_cols=32  Identities=19%  Similarity=0.201  Sum_probs=20.0

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             569999528478999999999999879889998585
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      |+|.+.=+|-+-+    .++..+-.+|++|.++=..
T Consensus         4 k~VaViGaG~MG~----gIA~~~a~~G~~V~l~D~~   35 (291)
T PRK06035          4 KVIGVVGSGVMGQ----GIAQVFARTGYDVTIVDVS   35 (291)
T ss_pred             CEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC
T ss_conf             8899988768899----9999999589988999899


No 354
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=78.32  E-value=3.1  Score=21.28  Aligned_cols=33  Identities=18%  Similarity=0.108  Sum_probs=20.1

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             5569999528478999999999999879889998585
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      =|+|.+.=+|-+-+    .++-.+..+|++|.++=..
T Consensus         4 ik~VaViGAG~MG~----giA~~~a~~G~~V~l~D~~   36 (292)
T PRK07530          4 IKKVGVIGAGQMGN----GIAHVCALAGYDVLLNDVS   36 (292)
T ss_pred             CCEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC
T ss_conf             88899989669999----9999999679968999798


No 355
>PRK10799 putative hydrolase-oxidase; Provisional
Probab=78.31  E-value=5.2  Score=19.83  Aligned_cols=113  Identities=19%  Similarity=0.222  Sum_probs=63.4

Q ss_pred             ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH---HHHHHHHCCCCCCCCCCEEEEE
Q ss_conf             4056600000388999999986400013465212553103223334345589999---9998631013200179778984
Q gi|254780622|r  122 APAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIR---QITWLLYKSKELLLKGKRALVT  198 (405)
Q Consensus       122 aPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~---~~~~~~~~~~~~~l~gk~vlIT  198 (405)
                      +=+||+++=.||-.--|....+..|....+....      -.+.|++++|-...+   .+...+         +..++..
T Consensus        93 lya~Ht~lD~~~~~G~N~~La~~Lgl~~~~~~e~------~~~~G~l~~~~~~~e~~~~vk~~l---------~~~~~~~  157 (247)
T PRK10799         93 LYGWHLPLDAHPELGNNAQLAALLGITVMGEIEP------LVPWGELTMPVPGLELASWIEARL---------GRKPLWC  157 (247)
T ss_pred             EEEECCCHHHCCCCCCHHHHHHHCCCCCCCCCCC------CCCEEEECCCCCHHHHHHHHHHHH---------CCCCEEE
T ss_conf             8984157222457780899999809910245566------542133089848999999999982---------9987898


Q ss_pred             ECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-----CCCCEEEEEH
Q ss_conf             04201010213576215772788999999982588389984156677-----6567467546
Q gi|254780622|r  199 SGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-----DPPNVMTIHV  255 (405)
Q Consensus       199 aG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-----~~~~~~~i~v  255 (405)
                      +|...+.|-.|=+.+-  ||   ...-++|...|+|+ ||+|.....     .-.++.++.+
T Consensus       158 ~~~~~~~I~rVAv~~G--sG---~~~i~~A~~~gaD~-~ITGd~k~h~~~~A~e~gl~lid~  213 (247)
T PRK10799        158 GDTGPEVVQRVAWCTG--GG---QSFIDSAARFGVDA-FITGEVSEQTIHSAREQGLHFYAA  213 (247)
T ss_pred             CCCCCCCCEEEEEEEC--CC---HHHHHHHHHCCCCE-EEECCCCHHHHHHHHHCCCEEEEC
T ss_conf             7789764208999948--72---89999999869999-996685538899999779969975


No 356
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=78.23  E-value=5.3  Score=19.82  Aligned_cols=20  Identities=35%  Similarity=0.449  Sum_probs=10.3

Q ss_pred             CCHHHHHHHHHHHHCCCCEE
Q ss_conf             72788999999982588389
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVI  236 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~  236 (405)
                      -|..|..+|+.+...|++|+
T Consensus        36 ~GnVG~~~A~~l~~~Gakvv   55 (200)
T cd01075          36 LGKVGYKLAEHLLEEGAKLI   55 (200)
T ss_pred             CCHHHHHHHHHHHHCCCEEE
T ss_conf             87999999999996799799


No 357
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases,  AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=77.98  E-value=5.4  Score=19.77  Aligned_cols=183  Identities=22%  Similarity=0.191  Sum_probs=91.9

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH-HHHHHCCHHHHHHH--HCCCCCCCCCCCCCC--------
Q ss_conf             8885569999528478999999999999879889998585-68630698999997--479758207678877--------
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK-SAQKFITPLIVGAI--SNRRVYTHLLSYKEG--------   70 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~-~A~~fi~~~~l~~l--t~~~v~~~~~~~~~~--------   70 (405)
                      +|+|.||..++-=   -.|+.-|++.|+..|++|++.-+. -++   .+..-.+|  .|-+|+-......++        
T Consensus        33 Pl~G~rI~~clHl---e~kTA~L~~tL~~~GA~V~~~~~NplST---QDdvaAaL~~~gi~VfA~~g~s~eey~~~l~~~  106 (413)
T cd00401          33 PLKGARIAGCLHM---TVQTAVLIETLVALGAEVRWSSCNIFST---QDHAAAAIAAAGIPVFAWKGETLEEYWWCIEQA  106 (413)
T ss_pred             CCCCCEEEEEEEC---HHHHHHHHHHHHHCCCEEEEECCCCCCC---HHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
T ss_conf             9899889999820---5889999999998599899963797653---289999999679769984799989999999999


Q ss_pred             ----CCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHH--HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             ----877430011446557884111888988520245521466675--22799689840566000003889999999864
Q gi|254780622|r   71 ----YESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILL--AKGDQPVLIAPAMNFMMWAKPATQRNVEILQK  144 (405)
Q Consensus        71 ----~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~l--a~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~  144 (405)
                          ..-||+-+-.=+|+....--..--+.+--.|.+.---|.+..  +-.+.-.+-+|+++.|  + ..++        
T Consensus       107 L~~~~~~P~iiiDDG~Dl~~~~h~~~~~~~~~i~G~~EETTTGv~RL~am~~~g~L~fP~iaVN--D-a~tK--------  175 (413)
T cd00401         107 LKFPDGEPNMILDDGGDLTLLIHKKHPELLPGIRGISEETTTGVHRLYKMEKEGKLKFPAINVN--D-SVTK--------  175 (413)
T ss_pred             HHCCCCCCCEEECCCCCHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEC--C-HHHH--------
T ss_conf             8287999646861441221213405746774201245553088999999997698278678863--6-6663--------


Q ss_pred             HCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHH
Q ss_conf             00013465212553103223334345589999999863101320017977898404201010213576215772788999
Q gi|254780622|r  145 DGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAI  224 (405)
Q Consensus       145 ~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~i  224 (405)
                                 .+. =+.+|.|     ...++.+.+.-    ...+.||+|+|-+=|                 --|.-+
T Consensus       176 -----------~~F-DNrYGtg-----qS~~dgi~r~T----n~liaGK~vVV~GYG-----------------~~GkG~  217 (413)
T cd00401         176 -----------SKF-DNLYGCR-----ESLIDGIKRAT----DVMIAGKVAVVAGYG-----------------DVGKGC  217 (413)
T ss_pred             -----------HHC-CCCCCCC-----HHHHHHHHHHH----HHEECCCEEEEECCC-----------------CCCHHH
T ss_conf             -----------340-1443332-----10899999874----212137779994577-----------------635688


Q ss_pred             HHHHHHCCCCEEEEE
Q ss_conf             999982588389984
Q gi|254780622|r  225 AKSLAYFGAEVILIS  239 (405)
Q Consensus       225 A~~~~~~Ga~V~li~  239 (405)
                      |..+.-.||.|+..-
T Consensus       218 A~r~rglGA~V~VtE  232 (413)
T cd00401         218 AQSLRGQGARVIVTE  232 (413)
T ss_pred             HHHHHHCCCEEEEEC
T ss_conf             998865898899971


No 358
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=77.98  E-value=4.7  Score=20.14  Aligned_cols=33  Identities=36%  Similarity=0.429  Sum_probs=21.6

Q ss_pred             CCCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             88855699-995284789999999999998798899985
Q gi|254780622|r    2 DLSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus         2 ~l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~   39 (405)
                      .|+||||+ +|+.+|-     .-.++.|.+.|++|.+.=
T Consensus         6 ~~~gk~v~v~GlG~sG-----~s~a~~L~~~G~~V~~~D   39 (457)
T PRK01390          6 SFKGKTVALFGLGGSG-----LATARALKAGGAEVIAWD   39 (457)
T ss_pred             CCCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEE
T ss_conf             0289989999436999-----999999997899799993


No 359
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=77.93  E-value=3.3  Score=21.10  Aligned_cols=33  Identities=12%  Similarity=0.253  Sum_probs=20.2

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             5699995284789999999999998798899985856
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      |||.+.=+|.+-+    .++-.+..+|++|.++=...
T Consensus         3 ~kV~ViGaG~mG~----~IA~~~a~~G~~V~l~D~~~   35 (284)
T PRK07819          3 QRVGVVGAGQMGS----GIAEVCARAGVDVLVFETTE   35 (284)
T ss_pred             CEEEEECCCHHHH----HHHHHHHHCCCEEEEEECCH
T ss_conf             6799989778999----99999995799089997988


No 360
>PRK09117 consensus
Probab=77.85  E-value=3.4  Score=21.03  Aligned_cols=32  Identities=16%  Similarity=0.230  Sum_probs=19.6

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             569999528478999999999999879889998585
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      |||.+.=+|.+-+    .++-.+..+|++|.++=..
T Consensus         3 ~~VaViGaG~mG~----~iA~~~a~~G~~V~l~D~~   34 (282)
T PRK09117          3 QTVGIIGAGTMGN----GIAQACAVAGLDVVMVDIS   34 (282)
T ss_pred             CEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC
T ss_conf             7799989779999----9999999679968999898


No 361
>PRK08322 acetolactate synthase; Reviewed
Probab=77.83  E-value=5.4  Score=19.74  Aligned_cols=10  Identities=30%  Similarity=0.375  Sum_probs=5.2

Q ss_pred             CCCCEEEEEC
Q ss_conf             5883899841
Q gi|254780622|r  231 FGAEVILISG  240 (405)
Q Consensus       231 ~Ga~V~li~g  240 (405)
                      ..+|+.+.-|
T Consensus       261 ~~aDlvl~iG  270 (547)
T PRK08322        261 EHADLIINVG  270 (547)
T ss_pred             HCCCEEEEEC
T ss_conf             6498689815


No 362
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=77.75  E-value=5.4  Score=19.73  Aligned_cols=20  Identities=20%  Similarity=0.233  Sum_probs=8.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHH
Q ss_conf             278998999999999999985
Q gi|254780622|r  382 YPELPKAEVADRLCHLIVEHL  402 (405)
Q Consensus       382 ~~~~sK~~iA~~Il~~i~~~L  402 (405)
                      ++..+..++. ++++.|.+-|
T Consensus       336 mG~~~~~di~-~~l~al~~~L  355 (356)
T cd06451         336 MGEATREDVL-GVLSALEEAL  355 (356)
T ss_pred             CCCCCHHHHH-HHHHHHHHHH
T ss_conf             9899999999-9999999985


No 363
>PRK07660 consensus
Probab=77.72  E-value=3.3  Score=21.14  Aligned_cols=34  Identities=21%  Similarity=0.119  Sum_probs=20.7

Q ss_pred             CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             85569999528478999999999999879889998585
Q gi|254780622|r    4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      +=|||.+.=+|-+-+    .++-.+..+|++|.++=..
T Consensus         2 ~Ik~VaViGaG~MG~----gIA~~~a~~G~~V~l~D~~   35 (283)
T PRK07660          2 GVQKIVVIGAGQMGS----GIAQVCAMAGYDVKVQDLK   35 (283)
T ss_pred             CCCEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC
T ss_conf             978899989698999----9999999669818999798


No 364
>cd01998 tRNA_Me_trans tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs. This family of enzyme only presents in bacteria and eukaryote. The  archaeal counterpart of this enzyme performs same function, but is completely unrelated in sequence.
Probab=77.47  E-value=3.2  Score=21.22  Aligned_cols=29  Identities=34%  Similarity=0.462  Sum_probs=20.4

Q ss_pred             EEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             69999528478-9999999999998798899985
Q gi|254780622|r    7 KIALIMCGSVA-VYKSLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus         7 ~IllgvtGsia-a~k~~~l~~~L~~~g~~V~vv~   39 (405)
                      ||++|.||++- ++    -+-+|+++|++|.-+.
T Consensus         1 kV~v~mSGGVDSsv----aA~LL~~~G~~V~gv~   30 (349)
T cd01998           1 KVVVAMSGGVDSSV----AAALLKEQGYEVIGVF   30 (349)
T ss_pred             CEEEECCCCHHHHH----HHHHHHHCCCCEEEEE
T ss_conf             98999077899999----9999987799579999


No 365
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=77.28  E-value=5.3  Score=19.79  Aligned_cols=152  Identities=15%  Similarity=0.148  Sum_probs=72.4

Q ss_pred             CCCCC--EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88855--6999952847899999999999987988999858568630698999997479758207678877877430011
Q gi|254780622|r    2 DLSGK--KIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLA   79 (405)
Q Consensus         2 ~l~~k--~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~   79 (405)
                      +|..+  |+|+.=.|.||.-|+..    |.+.|+.|+||.-+-     ++...+......+ +-.   .......+  | 
T Consensus        19 ~l~s~klkvLVVGGG~VA~RKi~~----Ll~agA~VtVVSP~~-----~~el~~L~~~~~I-~~i---~r~y~~~d--L-   82 (222)
T PRK05562         19 SLLSNKIKVLVIGGGKAAFIKGKT----FLKKGCYVEILSKEF-----SKEFLDLKKYGNL-KLI---KGNYDKEF--I-   82 (222)
T ss_pred             EEECCCCEEEEECCCHHHHHHHHH----HHHCCCEEEEECCCC-----CHHHHHHHHCCCE-EEE---ECCCCHHH--C-
T ss_conf             431267669999987999999999----987899899987866-----8899999975986-999---68679778--0-


Q ss_pred             CCCCEEEEEECCHH-----HHHHHHC--C----CCCCHHHHHHH---HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             44655788411188-----8988520--2----45521466675---227996898405660000038899999998640
Q gi|254780622|r   80 NECDLLVVAPASAN-----FIAHVAH--G----MVYDLASAILL---AKGDQPVLIAPAMNFMMWAKPATQRNVEILQKD  145 (405)
Q Consensus        80 ~~aD~~iVaPaTaN-----tiaK~A~--G----iaD~llt~~~l---a~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~  145 (405)
                      .  |.++|.-||-|     .+++.|.  |    .+||+-.+.+.   ...+.|+++|-+-..   .+|+..+.++.=-+.
T Consensus        83 ~--~~~LVIaATdd~~lN~~I~~~a~~~~ilvNvvddp~~~~fi~Paiv~Rg~L~IAIST~G---~SP~lAr~iR~klE~  157 (222)
T PRK05562         83 K--DKHLIIIATDDEELNNKIRKHCDRLYKLYIDCSDFKKGLCVIPYQRSSKNMVFALNTKG---GSPKTSVFIGEKVKN  157 (222)
T ss_pred             C--CCCEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCEEECEEEEECCEEEEEECCC---CCHHHHHHHHHHHHH
T ss_conf             8--87399994798899999999999809988985788768179770997289799998999---897999999999999


Q ss_pred             CCCCCCCCHHHHHHCCCCCCC-----CCCCHHHHHHHHHH
Q ss_conf             001346521255310322333-----43455899999998
Q gi|254780622|r  146 GCYFIGPESGAMAESNGYGVG-----RMSEPCDIIRQITW  180 (405)
Q Consensus       146 g~~vi~P~~g~la~c~~~G~g-----rl~e~~~I~~~~~~  180 (405)
                         ++ |+++.+.+  -.|.=     +.+.-.+|+.+++.
T Consensus       158 ---~~-pey~~~~~--~~g~~R~k~K~~~~k~ei~~~i~~  191 (222)
T PRK05562        158 ---FL-KKYDDFIE--YVTKIRNIIKKSELKDEIINFISS  191 (222)
T ss_pred             ---HH-HHHHHHHH--HHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             ---87-88999999--999999985261579999999854


No 366
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=76.46  E-value=5.9  Score=19.50  Aligned_cols=72  Identities=24%  Similarity=0.304  Sum_probs=36.6

Q ss_pred             CCCCCEEEEEEEC--HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8885569999528--47899999999999987988999858568630698999997479758207678877877430011
Q gi|254780622|r    2 DLSGKKIALIMCG--SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLA   79 (405)
Q Consensus         2 ~l~~k~IllgvtG--siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~   79 (405)
                      .|+||||+|.=-|  +.|      .++.|.++|+.+.+...+..... .+  .+.+.......+. +.    ..   +.-
T Consensus         5 ~~~gkkv~V~GlG~sG~a------aa~~L~~~g~~~~v~~~~~~~~~-~~--~~~~~~~~~~~~~-~~----~~---~~l   67 (468)
T PRK04690          5 QLEGKRVALWGWGREGRA------AYRALRAQLPAQPLTVFCNAEEV-RE--VGALADAALLVET-EA----SA---QRL   67 (468)
T ss_pred             HCCCCEEEEEEECHHHHH------HHHHHHHCCCEEEEEECCCCCCC-HH--HHHHCCCCCEEEC-CC----CH---HHH
T ss_conf             439797999834787999------99999966990499972883246-46--6762045756746-77----85---576


Q ss_pred             CCCCEEEEEEC
Q ss_conf             44655788411
Q gi|254780622|r   80 NECDLLVVAPA   90 (405)
Q Consensus        80 ~~aD~~iVaPa   90 (405)
                      ..+|++|+.|-
T Consensus        68 ~~~d~vv~SPG   78 (468)
T PRK04690         68 AAFEVVVKSPG   78 (468)
T ss_pred             HCCCEEEECCC
T ss_conf             14889998995


No 367
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=75.97  E-value=4  Score=20.55  Aligned_cols=34  Identities=21%  Similarity=0.183  Sum_probs=21.3

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             55699995284789999999999998798899985856
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      =|||.+.=+|.+-+    .++-.+.++|++|.++=...
T Consensus         3 i~~VaViGaG~mG~----~IA~~~a~~G~~V~l~D~~~   36 (282)
T PRK05808          3 IQKIGVIGAGTMGN----GIAQVCAVAGYDVVMVDISD   36 (282)
T ss_pred             CCEEEEECCCHHHH----HHHHHHHHCCCCEEEEECCH
T ss_conf             26899989788999----99999995799389997998


No 368
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=75.96  E-value=6.1  Score=19.41  Aligned_cols=32  Identities=28%  Similarity=0.217  Sum_probs=22.5

Q ss_pred             EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             699995284789999999999998798899985856
Q gi|254780622|r    7 KIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus         7 ~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      ||.+.=+|+..    --|...|.+.|++|+....+.
T Consensus         3 kI~ViGaGawG----tAlA~~la~n~~~V~lw~r~~   34 (325)
T PRK00094          3 KIAVLGAGSWG----TALAILLARNGHDVVLWGRDP   34 (325)
T ss_pred             EEEEECCCHHH----HHHHHHHHHCCCEEEEEEECH
T ss_conf             89998989999----999999997899789998389


No 369
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=75.69  E-value=6.2  Score=19.37  Aligned_cols=176  Identities=20%  Similarity=0.186  Sum_probs=100.7

Q ss_pred             EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEE
Q ss_conf             89840566000003889999999864000134652125531032233343455899999998631013200179778984
Q gi|254780622|r  119 VLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVT  198 (405)
Q Consensus       119 i~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlIT  198 (405)
                      .++-|-=...-.+....+++++.|...|+.-+-+       ||-.|.+-....++-..-+......     .+|+ +.|-
T Consensus        12 a~vTPF~~dg~iD~~~~~~~i~~l~~~Gv~gi~v-------~GstGE~~~Ls~eEr~~l~~~~~~~-----~~g~-~~vi   78 (296)
T TIGR03249        12 FPVTPFDADGSFDEAAYRENIEWLLGYGLEALFA-------AGGTGEFFSLTPAEYEQVVEIAVST-----AKGK-VPVY   78 (296)
T ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CCCCCCHHHCCHHHHHHHHHHHHHH-----CCCC-CEEE
T ss_conf             0248668987879999999999999779998997-------8305166658999999999999998-----3898-4151


Q ss_pred             ECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEH
Q ss_conf             04201010213576215772788999999982588389984156677656746754657789999998505888799740
Q gi|254780622|r  199 SGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVS  278 (405)
Q Consensus       199 aG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aA  278 (405)
                      +|-.            .|+ +--..+|+++...|++-.++.-|       ++....-+...+.++.+.+..+..+++-. 
T Consensus        79 ~gvg------------~~t-~~ai~la~~a~~~Gad~v~v~pP-------yy~~~~~~~l~~~f~~ia~a~~~pi~lYn-  137 (296)
T TIGR03249        79 TGVG------------GNT-SDAIEIARLAEKAGADGYLLLPP-------YLINGEQEGLYAHVEAVCESTDLGVIVYQ-  137 (296)
T ss_pred             CCCC------------HHH-HHHHHHHHHHHHCCCCEEEECCC-------CCCCCCHHHHHHHHHHHHHHCCCCEEEEC-
T ss_conf             2786------------129-99999999998759997897799-------88999999999999999971599778730-


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             444443222210112334557751045521806898876214899589998114123899999999974998999920
Q gi|254780622|r  279 AVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNC  356 (405)
Q Consensus       279 AVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~  356 (405)
                           +            ...       .-+|+.+.++.++ .|  -++|+|--+.++... .+-.++-+-++.+.+.
T Consensus       138 -----~------------~~~-------~~~~~~l~~L~~~-~p--~i~giK~s~~d~~~~-~~~~~~~~~~~~~~~g  187 (296)
T TIGR03249       138 -----R------------DNA-------VLNADTLERLADR-CP--NLVGFKDGIGDMEQM-IEITQRLGDRLGYLGG  187 (296)
T ss_pred             -----C------------CCC-------CCCHHHHHHHHHC-CC--CEEEEEECCCCHHHH-HHHHHHCCCCCEEEEC
T ss_conf             -----7------------787-------8799999999815-79--879999776689999-9999973997279738


No 370
>pfam07993 NAD_binding_4 Male sterility protein. This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included.
Probab=75.68  E-value=6.2  Score=19.37  Aligned_cols=25  Identities=12%  Similarity=0.090  Sum_probs=12.7

Q ss_pred             EEECHHHHHHHHHHHHHHHHCCC--EEEEEE
Q ss_conf             95284789999999999998798--899985
Q gi|254780622|r   11 IMCGSVAVYKSLDLIRRLRERGA--VVIPVM   39 (405)
Q Consensus        11 gvtGsiaa~k~~~l~~~L~~~g~--~V~vv~   39 (405)
                      |.||-|-    -.|+++|.+.+.  .|.++.
T Consensus         3 GaTGFlG----~~ll~~Ll~~~~~~~V~~Lv   29 (245)
T pfam07993         3 GATGFLG----KVLLEKLLRSCPEVKIYCLV   29 (245)
T ss_pred             CCHHHHH----HHHHHHHHHCCCCCEEEEEE
T ss_conf             8435999----99999999579997899996


No 371
>pfam02737 3HCDH_N 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. This family also includes lambda crystallin.
Probab=75.19  E-value=3.3  Score=21.12  Aligned_cols=26  Identities=35%  Similarity=0.473  Sum_probs=22.9

Q ss_pred             CCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             57727889999999825883899841
Q gi|254780622|r  215 RSSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       215 ~SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      --+|.||..||..+...|++|++.--
T Consensus         5 iGaG~mG~~iA~~~a~~G~~V~l~D~   30 (180)
T pfam02737         5 IGAGTMGAGIAQVFARAGLEVVLVDI   30 (180)
T ss_pred             ECCCHHHHHHHHHHHHCCCEEEEEEC
T ss_conf             99788999999999967993999979


No 372
>TIGR01035 hemA glutamyl-tRNA reductase; InterPro: IPR000343   Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin .   The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA.   The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III.   Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) .   This entry represents glutamyl-tRNA reductase (1.2.1.70 from EC), which reduces glutamyl-tRNA to glutamate-1-semialdehyde during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme required NADPH as a coenzyme.; GO: 0008883 glutamyl-tRNA reductase activity, 0050661 NADP binding, 0033014 tetrapyrrole biosynthetic process.
Probab=75.15  E-value=6.4  Score=19.28  Aligned_cols=145  Identities=18%  Similarity=0.224  Sum_probs=77.9

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC------CCCEEEEEHH--HHHH
Q ss_conf             0179778984042010102135762157727889999999825883899841566776------5674675465--7789
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIAD------PPNVMTIHVE--RAED  260 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~------~~~~~~i~v~--t~~e  260 (405)
                      .|+|+|+||-+                 -|+||...|+++...|..=.+|.+.+...-      .++-..+.+.  ..++
T Consensus       182 rL~~~~~LliG-----------------AGeMg~Lva~~L~~~~v~~~~i~NRt~~rA~~LA~e~~~P~~~~f~~La~~~  244 (436)
T TIGR01035       182 RLKGKKVLLIG-----------------AGEMGELVAKHLREKGVGKVLIANRTYERAEKLAKELGGPEAVKFEALALEK  244 (436)
T ss_pred             CCCCCEEEEEE-----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf             11664189982-----------------7457999999996489528988556778999999870786645444554899


Q ss_pred             HHHHHHHCCCCCEEEEEHHHHHHHHHHH--HHCCCCC--CC-CCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCH
Q ss_conf             9999985058887997404444432222--1011233--45-57751045521806898876214899589998114123
Q gi|254780622|r  261 MLQEVLKALPVDIAVMVSAVSDWRFPKI--AGTKIKR--KD-IGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQC  335 (405)
Q Consensus       261 m~~~~~~~~~~D~~I~aAAVSDf~~~~~--~~~Kikk--~s-~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~  335 (405)
                      |.+.+.   .+|++|+|-+-++|.+.+-  ..-...+  .+ ....+-+.+--=.|+=..+++.  ++.    |-..-||
T Consensus       245 L~~~L~---~~DivissTgA~~pi~~~~~~e~a~~~Rr~de~~~pl~~~DIAvPRdvd~~v~~L--~~v----fLy~vDD  315 (436)
T TIGR01035       245 LEEALA---EADIVISSTGAPEPIVSKEDVERALKERRRDEAARPLFIVDIAVPRDVDPEVAKL--EGV----FLYDVDD  315 (436)
T ss_pred             HHHHHH---HCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHCC--CCE----EEEEECC
T ss_conf             999974---2889998557653100203489999972220015886999758899863786222--966----9973031


Q ss_pred             HHH----HHH-HHHHHCCCCEEEEECCCC
Q ss_conf             899----999-999974998999920577
Q gi|254780622|r  336 IEQ----NAR-EKLLNKGADFIVSNCILP  359 (405)
Q Consensus       336 l~~----~A~-~Kl~~K~~D~IVAN~i~~  359 (405)
                      |..    |.. .+-....+-.||+.-+.+
T Consensus       316 L~~~~~~N~a~R~~~~~~ae~I~~~E~~~  344 (436)
T TIGR01035       316 LKEVVEENLAERREEAEKAELIVEEEVAE  344 (436)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             38999999999999999999999999999


No 373
>TIGR02536 eut_hyp ethanolamine utilization protein; InterPro: IPR013372    Proteins in this entry are encoded in operons for the polyhedral organelle-based degradation of ethanolamine. This family is not found in proteobacterial species, which otherwise have the same suite of genes in the eut operon. Proteobacteria have two genes that are not found in other species which encode proteins which may complement this family's function - a phosphotransacetylase (IPR002505 from INTERPRO), and EutJ (IPR013366 from INTERPRO) which is of unknown function..
Probab=75.06  E-value=4.6  Score=20.18  Aligned_cols=101  Identities=23%  Similarity=0.284  Sum_probs=65.5

Q ss_pred             CCCCCE-----EEEEECCHHHHHHHHCCCCCCH----HHHHHHHCCCCCEEEE-CCCCCHHHHH--H-----HHHHHHHH
Q ss_conf             144655-----7884111888988520245521----4666752279968984-0566000003--8-----89999999
Q gi|254780622|r   79 ANECDL-----LVVAPASANFIAHVAHGMVYDL----ASAILLAKGDQPVLIA-PAMNFMMWAK--P-----ATQRNVEI  141 (405)
Q Consensus        79 ~~~aD~-----~iVaPaTaNtiaK~A~GiaD~l----lt~~~la~~~~pi~ia-PaMn~~M~~~--p-----~~~~nl~~  141 (405)
                      .+.||.     +||--.|-+-|+.+|+|.+.|=    .+..+|  .++||++- |-.--+-|.|  |     ..+++.+.
T Consensus        58 ~~~~dietyefLl~~~L~i~~L~nIs~~~~~~~~E~~I~~~LL--~GK~~~il~~Gie~~kY~nt~p~~l~~~~~ey~e~  135 (248)
T TIGR02536        58 EKAADIETYEFLLVSKLSIKELANISKGAETNEKEKFILEFLL--EGKPVYILKEGIEYSKYENTAPYALKQKYQEYEEK  135 (248)
T ss_pred             HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH--CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             5533631233354333167899999733311227899999986--79948997477530013342128999999999886


Q ss_pred             HHHHC-CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             86400-01346521255310322333434558999999986
Q gi|254780622|r  142 LQKDG-CYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWL  181 (405)
Q Consensus       142 L~~~g-~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~  181 (405)
                      |.++| +.|.+-..-.-...+++-.----..|.+-..++..
T Consensus       136 l~~fGlI~~~~~~~~i~~~~~~e~v~g~~~~E~~~k~L~~~  176 (248)
T TIGR02536       136 LKSFGLIEFIDSENYITKESKDEEVKGSGIKEKLEKKLRSL  176 (248)
T ss_pred             HHHCCCEEEEECHHHHHHHHHCCCEECCCCHHHHHHHHHHH
T ss_conf             64276258860035665654055000155237778888765


No 374
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284   This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis .   Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=74.92  E-value=6.5  Score=19.24  Aligned_cols=150  Identities=20%  Similarity=0.247  Sum_probs=86.5

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEEE-------EHHHHHHHHHHHHHCCCCCEEEEEHHH
Q ss_conf             772788999999982588389984156677--------65674675-------465778999999850588879974044
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMTI-------HVERAEDMLQEVLKALPVDIAVMVSAV  280 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~i-------~v~t~~em~~~~~~~~~~D~~I~aAAV  280 (405)
                      ||.=-|.|||+.|.+.|++|.+-++.....        .-.|.+..       +.+..++|.+++.+.+..|++|-.|=+
T Consensus         6 asRGIG~AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~~~~~dvs~~~~~~~~~~~~~~~~GiDiLVNNAGI   85 (238)
T TIGR01830         6 ASRGIGRAIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAAGVVLDVSDREDVKALVEEAEEELGIDILVNNAGI   85 (238)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCC
T ss_conf             78616799999998679959996598257888999999856975999960388889999999999998299089978741


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH--CCCCCCE------EEEEEC---CCC------HHHHHHHHH
Q ss_conf             44432222101123345577510455218068988762--1489958------999811---412------389999999
Q gi|254780622|r  281 SDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH--HQCRPSI------VVGFAA---ETQ------CIEQNAREK  343 (405)
Q Consensus       281 SDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~--~k~~~~~------lVGFka---ET~------~l~~~A~~K  343 (405)
                      --=..    -=..|-.++++.+.+.|+-+--+-+.+.+  .|+|...      +||+.=   |++      =++-=.|.-
T Consensus        86 TrD~L----l~RMk~edWd~Vi~~NL~g~F~~t~~v~~~M~K~R~GrIINisSVVG~~GN~GQaNYaASKAG~IGftKSl  161 (238)
T TIGR01830        86 TRDNL----LMRMKEEDWDAVINVNLKGVFNLTQAVLRPMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSL  161 (238)
T ss_pred             CCCCH----HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             34301----00488556899998612668788899889887506743486100200006874267888875589999999


Q ss_pred             HHHCCCCEEEEECCCCCCCCCCCCCEEE
Q ss_conf             9974998999920577677777661189
Q gi|254780622|r  344 LLNKGADFIVSNCILPDTGFVGKEWNKV  371 (405)
Q Consensus       344 l~~K~~D~IVAN~i~~~~~~fgsd~n~v  371 (405)
                      -++=+--=|=+|-|.+  ||..+|.+..
T Consensus       162 AkElasRnItVNaVAP--GFI~TdMT~~  187 (238)
T TIGR01830       162 AKELASRNITVNAVAP--GFIETDMTDK  187 (238)
T ss_pred             HHHCCCCCCEEEEECC--CCCCCCCCHH
T ss_conf             9860368705888748--9989700021


No 375
>LOAD_USPA consensus
Probab=74.88  E-value=6.5  Score=19.24  Aligned_cols=33  Identities=36%  Similarity=0.417  Sum_probs=21.6

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHH-HHCCCEEEEE
Q ss_conf             56999952847899999999999-9879889998
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRL-RERGAVVIPV   38 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L-~~~g~~V~vv   38 (405)
                      ||||+++-||-.+.++.+.+-.+ ++.++++.++
T Consensus         1 k~Ilv~vd~s~~s~~a~~~A~~la~~~~a~l~~l   34 (135)
T LOAD_USPA         1 KKILVAIDGSPESEKALRWAVDLAKRRGAELILL   34 (135)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             9899998699899999999999998749989999


No 376
>PRK06116 glutathione reductase; Validated
Probab=74.84  E-value=6.5  Score=19.23  Aligned_cols=71  Identities=17%  Similarity=0.147  Sum_probs=46.6

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEE--CCEEE----------------EECCCCCHHHHH
Q ss_conf             223334345589999999863101320017977898404201010--21357----------------621577278899
Q gi|254780622|r  162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPL--DPMRY----------------IANRSSGQQGHA  223 (405)
Q Consensus       162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~I--D~VR~----------------ItN~SSGk~G~~  223 (405)
                      .+|.|++.++..+.-         ....+..++++|-.|.+.-..  ....+                +.---.|-.|.+
T Consensus       111 ~~g~a~f~~~~tv~v---------~~~~i~a~~ivIATGs~p~~p~ipG~e~~~tsd~~~~l~~lP~~v~IiGgG~ig~E  181 (450)
T PRK06116        111 IEGFARFVDAHTVEV---------NGETYTADHILIATGGRPSIPDIPGAEYGITSDGFFALEELPKRVAVVGAGYIAVE  181 (450)
T ss_pred             EEEEEEECCCCCCCC---------CCEEEEEEEEEECCCCCCCCCCCCCCCEEEECHHHCCCCCCCCEEEEECCCHHHHH
T ss_conf             970688726874035---------98298541799987897758999881126614452254547977999999666999


Q ss_pred             HHHHHHHCCCCEEEEECC
Q ss_conf             999998258838998415
Q gi|254780622|r  224 IAKSLAYFGAEVILISGP  241 (405)
Q Consensus       224 iA~~~~~~Ga~V~li~g~  241 (405)
                      +|..+...|.+||+|.-.
T Consensus       182 ~A~~~~~lG~~Vtlv~~~  199 (450)
T PRK06116        182 FAGVLHGLGSETHLFVRG  199 (450)
T ss_pred             HHHHHHHHCCEEEEEEEC
T ss_conf             999999609848999944


No 377
>COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion]
Probab=74.83  E-value=6.5  Score=19.23  Aligned_cols=87  Identities=21%  Similarity=0.244  Sum_probs=58.5

Q ss_pred             EECCCHHEECC-EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE-EEEEHHHHHHHHHHHHHCC----C-
Q ss_conf             40420101021-357621577278899999998258838998415667765674-6754657789999998505----8-
Q gi|254780622|r  198 TSGPTYEPLDP-MRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNV-MTIHVERAEDMLQEVLKAL----P-  270 (405)
Q Consensus       198 TaG~T~E~ID~-VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~-~~i~v~t~~em~~~~~~~~----~-  270 (405)
                      ++|-++-.--| ||.|--.-||+---.....|++.|||=.++.|=.- ..=++. -..+.+.-.|..+++++++    + 
T Consensus        18 lag~~rmqyp~~vRiIrv~CsGrvn~~fvl~Al~~GaDGV~v~GC~~-geCHy~~GN~ka~rR~~~lke~l~elgie~eR   96 (132)
T COG1908          18 LAGTSRMQYPPNVRIIRVMCSGRVNPEFVLKALRKGADGVLVAGCKI-GECHYISGNYKAKRRMELLKELLKELGIEPER   96 (132)
T ss_pred             HHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCC-CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf             21335564898437999632674189999999973898689934415-61233016647999999999999994888442


Q ss_pred             CCEEEEEHHHHHHHH
Q ss_conf             887997404444432
Q gi|254780622|r  271 VDIAVMVSAVSDWRF  285 (405)
Q Consensus       271 ~D~~I~aAAVSDf~~  285 (405)
                      .+.+.++||=.|=-.
T Consensus        97 v~~~wiSa~E~ekf~  111 (132)
T COG1908          97 VRVLWISAAEGEKFA  111 (132)
T ss_pred             EEEEEEEHHHHHHHH
T ss_conf             789997233688899


No 378
>TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ; InterPro: IPR013364    Proteins in this entry are predicted ATPases associated with plasmid transfer loci in bacteria. This family is most similar to the DotB ATPase (IPR013363 from INTERPRO) of a type-IV secretion-like system of the obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii..
Probab=74.53  E-value=3.7  Score=20.81  Aligned_cols=41  Identities=24%  Similarity=0.462  Sum_probs=27.9

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECC
Q ss_conf             03223334345589999999863101320017977898404201010213576215
Q gi|254780622|r  160 SNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANR  215 (405)
Q Consensus       160 c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~  215 (405)
                      ||++|.||    ..+++.+-++...+.+    +.||+     |.|  |||=||=|.
T Consensus       155 CG~TGSGK----STl~AaiY~~~l~t~p----dRKiv-----T~E--DPvEY~L~~  195 (374)
T TIGR02525       155 CGETGSGK----STLAAAIYRHCLETYP----DRKIV-----TYE--DPVEYILGS  195 (374)
T ss_pred             CCCCCCCH----HHHHHHHHHHHCCCCC----CCEEE-----EEE--CCEEEECCC
T ss_conf             17789728----9999999998507488----97079-----865--772123188


No 379
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=74.12  E-value=6.8  Score=19.12  Aligned_cols=182  Identities=18%  Similarity=0.144  Sum_probs=103.3

Q ss_pred             CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf             68984056600000388999999986400013465212553103223334345589999999863101320017977898
Q gi|254780622|r  118 PVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALV  197 (405)
Q Consensus       118 pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlI  197 (405)
                      |-++-|.-...--+-.+++++++.|.+.|+.=+-+       ||..|.+-...+++-..-++.....      .+.|+-|
T Consensus        10 ~a~vTPF~~dg~vD~~a~~~lv~~li~~Gv~gi~~-------~GttGE~~~Ls~eEr~~v~~~~v~~------~~grvpv   76 (299)
T COG0329          10 PALVTPFDEDGSVDEEALRRLVEFLIAAGVDGLVV-------LGTTGESPTLTLEERKEVLEAVVEA------VGGRVPV   76 (299)
T ss_pred             ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CCCCCCCHHCCHHHHHHHHHHHHHH------HCCCCCE
T ss_conf             12038998999839999999999999849988997-------9866572216999999999999999------6897778


Q ss_pred             EECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             40420101021357621577278899999998258838998415667765674675465778999999850588879974
Q gi|254780622|r  198 TSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMV  277 (405)
Q Consensus       198 TaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~a  277 (405)
                      .+|...            .|=+--.++|+.+...|++-.++..|-...++       -+..-+-+.++.+..+..+++  
T Consensus        77 iaG~g~------------~~t~eai~lak~a~~~Gad~il~v~PyY~k~~-------~~gl~~hf~~ia~a~~lPvil--  135 (299)
T COG0329          77 IAGVGS------------NSTAEAIELAKHAEKLGADGILVVPPYYNKPS-------QEGLYAHFKAIAEAVDLPVIL--  135 (299)
T ss_pred             EEECCC------------CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC-------HHHHHHHHHHHHHHCCCCEEE--
T ss_conf             986287------------77999999999999709999998489788989-------799999999999851899899--


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             04444432222101123345577510455218068988762148995899981141238999999999749989999205
Q gi|254780622|r  278 SAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCI  357 (405)
Q Consensus       278 AAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i  357 (405)
                           |-.+..        ...       .-+|+.+..+.+    ..-+||+|-.++++....+-......-|+++.+.-
T Consensus       136 -----YN~P~~--------tg~-------~l~~e~i~~la~----~~nivgiKd~~gd~~~~~~~~~~~~~~~f~v~~G~  191 (299)
T COG0329         136 -----YNIPSR--------TGV-------DLSPETIARLAE----HPNIVGVKDSSGDLDRLEEIIAALGDRDFIVLSGD  191 (299)
T ss_pred             -----EECCCC--------CCC-------CCCHHHHHHHHC----CCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECC
T ss_conf             -----978752--------489-------999999999827----89889998478899999999986487662898266


No 380
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=74.09  E-value=6.8  Score=19.11  Aligned_cols=156  Identities=19%  Similarity=0.123  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCE
Q ss_conf             00388999999986400013465212553103223334345589999999863101320017977898404201010213
Q gi|254780622|r  130 WAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPM  209 (405)
Q Consensus       130 ~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~V  209 (405)
                      -+....+++++.|...|+.=+-+       ||..|.+-....++=...+.......     .| ++-|-+|.+..     
T Consensus        26 iD~~~l~~lv~~li~~Gv~gl~~-------~GttGE~~~Ls~~Er~~v~~~~~e~~-----~g-r~pvi~G~~~~-----   87 (309)
T cd00952          26 VDLDETARLVERLIAAGVDGILT-------MGTFGECATLTWEEKQAFVATVVETV-----AG-RVPVFVGATTL-----   87 (309)
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEE-------CCCCCHHHHCCHHHHHHHHHHHHHHH-----CC-CCEEEECCCCC-----
T ss_conf             37999999999999769998997-------92350043487999999999999983-----89-85099605750-----


Q ss_pred             EEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHH
Q ss_conf             576215772788999999982588389984156677656746754657789999998505-8887997404444432222
Q gi|254780622|r  210 RYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKI  288 (405)
Q Consensus       210 R~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~  288 (405)
                             |=+.-.++++.+...||+-.++.-|...      + ..-+...+.++++-+.. +.-+++       |-.+..
T Consensus        88 -------~t~~ai~~a~~a~~~Gad~~lv~~P~y~------~-~~~~~l~~~~~~ia~a~~~lPiil-------Yn~P~~  146 (309)
T cd00952          88 -------NTRDTIARTRALLDLGADGTMLGRPMWL------P-LDVDTAVQFYRDVAEAVPEMAIAI-------YANPEA  146 (309)
T ss_pred             -------HHHHHHHHHHHHHHCCCCEEEECCCCCC------C-CCHHHHHHHHHHHHHHCCCCCEEE-------EECCCC
T ss_conf             -------5999999999998469899998888588------9-999999999999998678998899-------968640


Q ss_pred             HHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH
Q ss_conf             10112334557751045521806898876214899589998114123899999999
Q gi|254780622|r  289 AGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKL  344 (405)
Q Consensus       289 ~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl  344 (405)
                              ..     ..  -.|+.+..|.+  .|  -+||+| |+.+....+..-.
T Consensus       147 --------tg-----~~--l~~~~~~~La~--~p--nivgvK-~s~~~~~~~~~~~  182 (309)
T cd00952         147 --------FK-----FD--FPRAAWAELAQ--IP--QVVAAK-YLGDIGALLSDLA  182 (309)
T ss_pred             --------CC-----CC--CCHHHHHHHHC--CC--CEEEEE-ECCCCHHHHHHHH
T ss_conf             --------01-----57--89999999955--99--989999-3788367999999


No 381
>PRK12831 putative oxidoreductase; Provisional
Probab=74.09  E-value=6.8  Score=19.11  Aligned_cols=42  Identities=24%  Similarity=0.273  Sum_probs=32.0

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
Q ss_conf             17977898404201010213576215772788999999982588389984156677656
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPP  248 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~  248 (405)
                      ..||+|+|-+||-                 ++.-.|..+.+.||+|++++-.....-|.
T Consensus       279 ~~Gk~VvVIGGGn-----------------tA~D~arta~R~GaeV~ivyrr~~~~mpa  320 (464)
T PRK12831        279 KVGKKVAVVGGGN-----------------VAMDAARTALRLGAEVHIVYRRSEEELPA  320 (464)
T ss_pred             CCCCEEEEECCCH-----------------HHHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf             2587789988855-----------------68999998874297799970457213898


No 382
>PRK06526 transposase; Provisional
Probab=73.91  E-value=4.2  Score=20.45  Aligned_cols=31  Identities=16%  Similarity=0.314  Sum_probs=23.7

Q ss_pred             EEECCCCCHHHHHH--HHHHHHCCCCEEEEECC
Q ss_conf             76215772788999--99998258838998415
Q gi|254780622|r  211 YIANRSSGQQGHAI--AKSLAYFGAEVILISGP  241 (405)
Q Consensus       211 ~ItN~SSGk~G~~i--A~~~~~~Ga~V~li~g~  241 (405)
                      ++.+..+||+-.+.  +.++..+|+.|.++..+
T Consensus       103 l~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~  135 (254)
T PRK06526        103 FLGPPGTGKTHLAIGLGIRACQAGHRVLFATAA  135 (254)
T ss_pred             EECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHH
T ss_conf             989999868999999999999869967998779


No 383
>pfam00201 UDPGT UDP-glucoronosyl and UDP-glucosyl transferase.
Probab=73.78  E-value=6.9  Score=19.06  Aligned_cols=36  Identities=25%  Similarity=0.257  Sum_probs=23.0

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             5569999528478999999999999879889998585
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      ||=+++-..||= ..=.-.+.++|.++|++|.++.+.
T Consensus         1 ~kVLVfP~~gSH-~~~~~~l~~~La~RGH~VTvl~p~   36 (501)
T pfam00201         1 GKVLVWPMDGSH-WMNMKGILLELVQRGHEVTVLRPS   36 (501)
T ss_pred             CCEEEECCCCCH-HHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf             958998499984-999999999999889929999713


No 384
>KOG1429 consensus
Probab=73.73  E-value=6.4  Score=19.29  Aligned_cols=33  Identities=18%  Similarity=0.221  Sum_probs=21.2

Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             885569999528478999999999999879889998
Q gi|254780622|r    3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPV   38 (405)
Q Consensus         3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv   38 (405)
                      +.++||++-=.|+.   =.-+|++.|...|++|-++
T Consensus        25 ~~~lrI~itGgaGF---IgSHLvdkLm~egh~Via~   57 (350)
T KOG1429          25 SQNLRILITGGAGF---IGSHLVDKLMTEGHEVIAL   57 (350)
T ss_pred             CCCEEEEEECCCCH---HHHHHHHHHHHCCCEEEEE
T ss_conf             88707999657405---8899999997468779998


No 385
>pfam05025 RbsD_FucU RbsD / FucU transport protein family. The Escherichia coli high-affinity ribose-transport system consists of six proteins encoded by the rbs operon (rbsD, rbsA, rbsC, rbsB, rbsK and rbsR). Of the six components, RbsD is the only one whose function is unknown although it is thought that it somehow plays a critical role in PtsG-mediated ribose transport. This family also includes FucU a protein from the fucose biosynthesis operon that is presumably also involved in fucose transport by similarity to RbsD.
Probab=73.43  E-value=7  Score=19.01  Aligned_cols=67  Identities=21%  Similarity=0.255  Sum_probs=52.4

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEE------HHHHHHHHHHHHHCCCCCEEEEEHHHHHH
Q ss_conf             72788999999982588389984156677656746754------65778999999850588879974044444
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIH------VERAEDMLQEVLKALPVDIAVMVSAVSDW  283 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~------v~t~~em~~~~~~~~~~D~~I~aAAVSDf  283 (405)
                      +|-..-.|...+...||-=.++-+-.+.+.|++.+.+.      .-++.|.++++++.++.|-++.+....+.
T Consensus         4 ~~iLnp~Ll~~La~mGHgD~ivI~Da~fP~~~~~~~idL~l~~g~~~~~~vl~aIL~~~pld~~v~a~~~~~~   76 (137)
T pfam05025         4 TPLLNPELLAVLAAMGHGDEIVIADAGLPIPSGVKRIDLALRPGGPSFLDVLEAVLSEMPVEKAVLAEEIKMQ   76 (137)
T ss_pred             CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECHHHCCC
T ss_conf             5767999999999769999899916999888887606589837999989999999974775426856233047


No 386
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=73.20  E-value=7.1  Score=18.98  Aligned_cols=199  Identities=20%  Similarity=0.168  Sum_probs=86.6

Q ss_pred             EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH-----HHCCHH---HHHHHHCCCCCCC-CC-CCCCCCCCCCC
Q ss_conf             69999528478999999999999879889998585686-----306989---9999747975820-76-78877877430
Q gi|254780622|r    7 KIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ-----KFITPL---IVGAISNRRVYTH-LL-SYKEGYESNHI   76 (405)
Q Consensus         7 ~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~-----~fi~~~---~l~~lt~~~v~~~-~~-~~~~~~~~~Hi   76 (405)
                      ||-+.=||=+    ..-..-.|-+.|++|.++=-...+     +-+.|.   -|+.+-.+..-.. +. ..+..      
T Consensus         2 kI~viGtGYV----GLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~------   71 (414)
T COG1004           2 KITVIGTGYV----GLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYE------   71 (414)
T ss_pred             CEEEECCCHH----HHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEECCHH------
T ss_conf             1589888556----887899998709848999578899999867999976705899998462357279874788------


Q ss_pred             CCCCCCCEEEEEECCHHHHHHHHCCCCCCH-HHHHH---HHCC-CCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC----
Q ss_conf             011446557884111888988520245521-46667---5227-99689840566000003889999999864000----
Q gi|254780622|r   77 QLANECDLLVVAPASANFIAHVAHGMVYDL-ASAIL---LAKG-DQPVLIAPAMNFMMWAKPATQRNVEILQKDGC----  147 (405)
Q Consensus        77 ~l~~~aD~~iVaPaTaNtiaK~A~GiaD~l-lt~~~---la~~-~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~----  147 (405)
                      +-.+.+|+..||=-|-   .+- .|-+|.- +-+++   .... +..++|.-+--+     |-|.+++++.-....    
T Consensus        72 ~a~~~adv~fIavgTP---~~~-dg~aDl~~V~ava~~i~~~~~~~~vvV~KSTVP-----vGt~~~v~~~i~~~~~~~~  142 (414)
T COG1004          72 EAVKDADVVFIAVGTP---PDE-DGSADLSYVEAVAKDIGEILDGKAVVVIKSTVP-----VGTTEEVRAKIREENSGKD  142 (414)
T ss_pred             HHHHCCCEEEEECCCC---CCC-CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC-----CCCHHHHHHHHHHHCCCCC
T ss_conf             8962597799974899---998-897328999999999986267873999848879-----8846999999986346777


Q ss_pred             --CCCCCCHHHHHHCCCCCCC-------------CCCC-HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEE
Q ss_conf             --1346521255310322333-------------4345-58999999986310132001797789840420101021357
Q gi|254780622|r  148 --YFIGPESGAMAESNGYGVG-------------RMSE-PCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRY  211 (405)
Q Consensus       148 --~vi~P~~g~la~c~~~G~g-------------rl~e-~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~  211 (405)
                        .+..|+.  |    .||.+             ---+ ..+++.++-.-+..      ++-.+|+|.=.|.|-|-   |
T Consensus       143 f~v~~NPEF--L----REG~Av~D~~~PdRIViG~~~~~a~~~~~ely~~~~~------~~~p~l~t~~~~AE~IK---y  207 (414)
T COG1004         143 FEVASNPEF--L----REGSAVYDFLYPDRIVIGVRSERAAAVLRELYAPFLR------QDVPILFTDLREAELIK---Y  207 (414)
T ss_pred             CEEECCHHH--H----CCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH------CCCCEEEECCHHHHHHH---H
T ss_conf             507618678--4----4752344315898389925771689999999753420------49988995602999999---9


Q ss_pred             EECCCCC-H--HHHHHHHHHHHCCCCEEEEE
Q ss_conf             6215772-7--88999999982588389984
Q gi|254780622|r  212 IANRSSG-Q--QGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       212 ItN~SSG-k--~G~~iA~~~~~~Ga~V~li~  239 (405)
                      -+|..=- |  .=-+||..|-..|+++.-|.
T Consensus       208 aaNafLAtKIsFiNEia~ice~~g~D~~~V~  238 (414)
T COG1004         208 AANAFLATKISFINEIANICEKVGADVKQVA  238 (414)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             9889999999999999999999698999999


No 387
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=73.19  E-value=7.1  Score=18.97  Aligned_cols=36  Identities=25%  Similarity=0.373  Sum_probs=26.7

Q ss_pred             EEEEEE------ECHHHHHHHHHHHHHHHHCCCEEEEEECHHH
Q ss_conf             699995------2847899999999999987988999858568
Q gi|254780622|r    7 KIALIM------CGSVAVYKSLDLIRRLRERGAVVIPVMTKSA   43 (405)
Q Consensus         7 ~Illgv------tGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A   43 (405)
                      ||++..      .||+..+ +.+|++.|.++|++|.|+-+...
T Consensus         1 kIl~i~~~f~P~~GG~e~~-~~~la~~L~~~Gh~V~v~t~~~~   42 (364)
T cd03814           1 RIAIVTDTFLPQVNGVVRT-LQRLVEHLRARGHEVLVIAPGPF   42 (364)
T ss_pred             CEEEEECCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECCCC
T ss_conf             9899938889998849999-99999999977998999978997


No 388
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=72.57  E-value=4.1  Score=20.50  Aligned_cols=18  Identities=17%  Similarity=0.226  Sum_probs=15.3

Q ss_pred             CHHHHHHHHHHHHCCCCE
Q ss_conf             278899999998258838
Q gi|254780622|r  218 GQQGHAIAKSLAYFGAEV  235 (405)
Q Consensus       218 Gk~G~~iA~~~~~~Ga~V  235 (405)
                      .+.-.++++++.++|.+.
T Consensus       197 ~~~~~al~~~~~~~G~~~  214 (410)
T PRK12409        197 HKFTTGLAAACARLGVQF  214 (410)
T ss_pred             HHHHHHHHHHHHHCCCEE
T ss_conf             999999999999779999


No 389
>PRK05599 hypothetical protein; Provisional
Probab=72.33  E-value=7.5  Score=18.85  Aligned_cols=68  Identities=16%  Similarity=0.274  Sum_probs=36.5

Q ss_pred             ECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--------C--CCCCEEEE-----EHHHHHHHHHHHHHCC-CCCEEEE
Q ss_conf             21577278899999998258838998415667--------7--65674675-----4657789999998505-8887997
Q gi|254780622|r  213 ANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--------A--DPPNVMTI-----HVERAEDMLQEVLKAL-PVDIAVM  276 (405)
Q Consensus       213 tN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--------~--~~~~~~~i-----~v~t~~em~~~~~~~~-~~D~~I~  276 (405)
                      |--|||- |.++|+.+. +|++|.++......        .  ....+..+     ..++.+++.+++.+.. +.|++|.
T Consensus         6 TGASsGI-G~a~A~~lA-~G~~vvl~~R~~e~l~~l~~~l~~~g~~~v~~~~~Dvtd~~~~~~~v~~~~~~~g~id~lv~   83 (246)
T PRK05599          6 LGGTSDI-AGEIATLLA-HGEDVVLAARRPEAAGGLAEDLRQLGATSVHVLSFDATDLDSHRELVKQTQELAGEISLAVV   83 (246)
T ss_pred             ECCCHHH-HHHHHHHHH-CCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             8886899-999999998-59949999999999999999998625971899728999999999999999986198439998


Q ss_pred             EHHHHH
Q ss_conf             404444
Q gi|254780622|r  277 VSAVSD  282 (405)
Q Consensus       277 aAAVSD  282 (405)
                      +|.+..
T Consensus        84 naGi~~   89 (246)
T PRK05599         84 AFGILG   89 (246)
T ss_pred             CCCCCC
T ss_conf             776678


No 390
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=72.21  E-value=7.5  Score=18.83  Aligned_cols=70  Identities=16%  Similarity=0.246  Sum_probs=34.2

Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88556999952847899999999999987988999858568630698999997479758207678877877430011446
Q gi|254780622|r    3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANEC   82 (405)
Q Consensus         3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~a   82 (405)
                      |+||=+++|...|-     .-.+|.|.+.|++|.+.=.+.+..   ...++.+ +.+.+.   ...   .   -+.-..+
T Consensus        16 l~~kvlV~GlG~SG-----~s~a~~L~~~G~~v~~~D~~~~~~---~~~~~~~-~~~~~~---~~~---~---~~~~~~~   77 (476)
T PRK00141         16 LRGRVLVAGAGVSG-----LGIAKMLSELGCDVVVADDNETQR---HMLIEVV-DVADIS---TAQ---A---SDALDSY   77 (476)
T ss_pred             HCCCEEEEEECHHH-----HHHHHHHHHCCCEEEEEECCCCHH---HHHHHHC-CCCEEC---CCC---H---HHHHCCC
T ss_conf             69988999227889-----999999997899799998998703---5788747-985651---553---0---6564689


Q ss_pred             CEEEEEEC
Q ss_conf             55788411
Q gi|254780622|r   83 DLLVVAPA   90 (405)
Q Consensus        83 D~~iVaPa   90 (405)
                      |++|+.|.
T Consensus        78 d~vV~SPG   85 (476)
T PRK00141         78 SIVVTSPG   85 (476)
T ss_pred             CEEEECCC
T ss_conf             99998997


No 391
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=72.10  E-value=3.4  Score=21.00  Aligned_cols=88  Identities=15%  Similarity=0.220  Sum_probs=50.0

Q ss_pred             HHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH--EE----CCEE
Q ss_conf             99999864000134652125531032233343455899999998631013200179778984042010--10----2135
Q gi|254780622|r  137 RNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE--PL----DPMR  210 (405)
Q Consensus       137 ~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E--~I----D~VR  210 (405)
                      .+...+...|+.++            .|.+|+.++..+.-.     .......+..++++|-.|.+.-  +|    |.=+
T Consensus        81 ~~~~~~~~~gv~~~------------~g~a~~~~~~~v~V~-----~~~~~~~~~a~~iIIATGs~p~~l~ipG~~d~~~  143 (438)
T PRK07251         81 KNYAMLAGTGVDIY------------DAEAHFVSNKVIEVT-----AGDEKQELTAETIVINTGAVSNVLPIPGLADSKH  143 (438)
T ss_pred             HHHHHHHHCCCEEE------------EEEEEECCCCEEEEE-----CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCE
T ss_conf             99999974894899------------979998168489995-----5997299997689872678786699886568756


Q ss_pred             EEEC---------------CCCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             7621---------------577278899999998258838998415
Q gi|254780622|r  211 YIAN---------------RSSGQQGHAIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       211 ~ItN---------------~SSGk~G~~iA~~~~~~Ga~V~li~g~  241 (405)
                      .+++               --.|-.|.++|..+...|.+||+|...
T Consensus       144 v~~s~~~~~l~~~p~~v~ViGgG~ig~E~A~~~~~lG~~Vtli~~~  189 (438)
T PRK07251        144 VYDSTGIQNLEKLPKRLGILGGGNIGLEFAGLYNKLGSKVTVLDAA  189 (438)
T ss_pred             EEECHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf             9801787646537976999888645889999998348768999846


No 392
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=71.90  E-value=7.6  Score=18.78  Aligned_cols=138  Identities=18%  Similarity=0.187  Sum_probs=60.7

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC---CCCCCEEE----EEHHHHHHHHH
Q ss_conf             797789840420101021357621577278899999998258838998415667---76567467----54657789999
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI---ADPPNVMT----IHVERAEDMLQ  263 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~---~~~~~~~~----i~v~t~~em~~  263 (405)
                      ..++|+|-+|                +|+||...++.+...|+.|..+--..-.   ....+..+    +++..+.+..+
T Consensus        97 ~~~~i~IIGG----------------~G~mG~~F~~~f~~sGy~V~ild~~dw~~~~~~~~~advViVsVPI~~T~~VI~  160 (374)
T PRK11199         97 DLRPVVIVGG----------------KGQLGRLFAKMLTLSGYQVRILEKDDWDRADDILADAGMVIVSVPIHLTEEVIE  160 (374)
T ss_pred             CCCEEEEEEC----------------CCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCEEEEEECHHHHHHHHH
T ss_conf             9871799807----------------982779999999967987996164445348988717998999814588999998


Q ss_pred             HHHHCCCCCEEEEEHHHHHHHHHHHHH-CCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH
Q ss_conf             998505888799740444443222210-1123345577510455218068988762148995899981141238999999
Q gi|254780622|r  264 EVLKALPVDIAVMVSAVSDWRFPKIAG-TKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNARE  342 (405)
Q Consensus       264 ~~~~~~~~D~~I~aAAVSDf~~~~~~~-~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~  342 (405)
                      ++ ..++.|.+++     |.+--+... ....+...+..+-++-.-.||+= ++     ..|.+|-.-....+-.+...+
T Consensus       161 ~l-~~l~~~~lL~-----DiTSvK~~Pl~aMl~~h~gpV~GlHPMFGP~v~-sl-----~~QvVV~c~gr~~e~~~wl~~  228 (374)
T PRK11199        161 KL-PPLPEDCILV-----DLTSVKNGPLQAMLAAHSGPVLGLHPMFGPDVG-SL-----AKQVVVVCDGRQPEAYQWLLE  228 (374)
T ss_pred             HC-CCCCCCCEEE-----ECHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCC-CC-----CCCEEEECCCCCHHHHHHHHH
T ss_conf             57-7899986898-----610042789999998568985022778799964-44-----787699889998377899999


Q ss_pred             HHHHCCCCEEEEEC
Q ss_conf             99974998999920
Q gi|254780622|r  343 KLLNKGADFIVSNC  356 (405)
Q Consensus       343 Kl~~K~~D~IVAN~  356 (405)
                      .+...|+-++..+.
T Consensus       229 ~~~~~Ga~l~~~~~  242 (374)
T PRK11199        229 QIQIWGARLHRISA  242 (374)
T ss_pred             HHHHHCCEEEECCH
T ss_conf             99984878998688


No 393
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=71.80  E-value=7.7  Score=18.77  Aligned_cols=74  Identities=15%  Similarity=0.213  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE
Q ss_conf             58999999986310132001797789840420101021357621577278899999998258838998415667765674
Q gi|254780622|r  171 PCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNV  250 (405)
Q Consensus       171 ~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~  250 (405)
                      |..|++-+.++     ..+++||+|+|-+-                |---|.-+|.-+..+||.||..|..+.       
T Consensus       143 p~av~~lL~~y-----~i~~~Gk~vvVvGr----------------S~iVGkPla~lL~~~~atVTichs~T~-------  194 (288)
T PRK10792        143 PRGIVTLLERY-----NIDTFGLNAVVIGA----------------SNIVGRPMSMELLLAGCTTTVTHRFTK-------  194 (288)
T ss_pred             HHHHHHHHHHC-----CCCCCCCEEEEECC----------------CCCCCHHHHHHHHHCCCEEEEECCCCC-------
T ss_conf             99999999974-----75637888999567----------------663438999999866995986257887-------


Q ss_pred             EEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH
Q ss_conf             6754657789999998505888799740444443
Q gi|254780622|r  251 MTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWR  284 (405)
Q Consensus       251 ~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~  284 (405)
                               ++.+.+   ..+|++|.|+-+..|-
T Consensus       195 ---------nl~~~~---~~ADIvIsA~G~p~~i  216 (288)
T PRK10792        195 ---------NLRHHV---ENADLLIVAVGKPGFI  216 (288)
T ss_pred             ---------CHHHHH---HHCCEEEEECCCCCCC
T ss_conf             ---------889999---8578976404886756


No 394
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=71.69  E-value=5.8  Score=19.57  Aligned_cols=32  Identities=16%  Similarity=0.164  Sum_probs=19.2

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             569999528478999999999999879889998585
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      |||.+.=+|-+-+    .++-.+..+|++|.++=..
T Consensus         3 kkV~ViGaG~MG~----~IA~~~a~~G~~V~l~D~~   34 (289)
T PRK09260          3 EKIVVVGAGVMGR----GIAYVFASSGFQTTLVDIS   34 (289)
T ss_pred             CEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC
T ss_conf             7699979688789----9999999689988999799


No 395
>PRK05370 argininosuccinate synthase; Validated
Probab=71.65  E-value=7.7  Score=18.75  Aligned_cols=38  Identities=18%  Similarity=0.386  Sum_probs=28.3

Q ss_pred             CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH
Q ss_conf             85569999528478999999999999879889998585686
Q gi|254780622|r    4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ   44 (405)
Q Consensus         4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~   44 (405)
                      .||||+|+-||+.-.   --.+.+|+++|++|.++.-.-++
T Consensus        10 ~gkKVvLAYSGGLDT---Sv~l~wL~e~g~eVia~taDvGQ   47 (447)
T PRK05370         10 VGQRVGIAFSGGLDT---SAALLWMRQKGAVPYAYTANLGQ   47 (447)
T ss_pred             CCCEEEEEECCCCHH---HHHHHHHHHCCCEEEEEEEECCC
T ss_conf             888899995898279---99999998759879999997999


No 396
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=71.39  E-value=7.8  Score=18.71  Aligned_cols=182  Identities=25%  Similarity=0.258  Sum_probs=101.4

Q ss_pred             CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCC--HHHHHHH---HCCCCCCCCCCCCC-------
Q ss_conf             88855699995284789999999999998798899985856863069--8999997---47975820767887-------
Q gi|254780622|r    2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFIT--PLIVGAI---SNRRVYTHLLSYKE-------   69 (405)
Q Consensus         2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~--~~~l~~l---t~~~v~~~~~~~~~-------   69 (405)
                      +|+|-||.-++-=   .+|+.-|+..|+..|++|+..-.    +..+  +..-+++   .|-||+-.--...+       
T Consensus        42 PlkG~~i~~~lH~---t~kTAvLietL~a~GAeV~~a~c----NplSTqD~vaaAl~~~~GipVfA~kGe~~eeY~~~~~  114 (420)
T COG0499          42 PLKGARIAGCLHM---TAKTAVLIETLKAGGAEVRWASC----NPLSTQDDVAAALAAKEGIPVFAWKGETLEEYYEAID  114 (420)
T ss_pred             CCCCCEEEEEEEE---HHHHHHHHHHHHHCCCEEEEECC----CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
T ss_conf             9776578998731---58799999999855856998527----8876667899998750596179970787899999999


Q ss_pred             --CCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             --787743001144655788411188898852024552146667--5227996898405660000038899999998640
Q gi|254780622|r   70 --GYESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKD  145 (405)
Q Consensus        70 --~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~  145 (405)
                        ....+.|-+-.=+|+..+.--..-.+..--.|.+.---|.+.  .+-.+.-++-+|++|-+  ++ .|+         
T Consensus       115 ~vl~~~p~iiiDDG~D~~~~vh~~~~~l~~~i~G~tEETTTGV~RL~am~~~G~L~fPai~VN--Ds-~tK---------  182 (420)
T COG0499         115 QVLDWEPNIIIDDGGDLTKLVHLERPELLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVN--DS-VTK---------  182 (420)
T ss_pred             HHHCCCCCEEEECCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEC--CH-HHH---------
T ss_conf             995659987982473202100005487887742877534228999998976697323558604--34-441---------


Q ss_pred             CCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHH
Q ss_conf             00134652125531032233343455899999998631013200179778984042010102135762157727889999
Q gi|254780622|r  146 GCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIA  225 (405)
Q Consensus       146 g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA  225 (405)
                       +.|          =+.+|.|     +..++.+.+..    ...+.||.++|-+                 =|--|.-+|
T Consensus       183 -~~F----------DNrYGtg-----qS~~DgI~RaT----n~liaGK~vVV~G-----------------YG~vGrG~A  225 (420)
T COG0499         183 -SLF----------DNRYGTG-----QSLLDGILRAT----NVLLAGKNVVVAG-----------------YGWVGRGIA  225 (420)
T ss_pred             -CCC----------CCCCCCC-----HHHHHHHHHHH----CEEECCCEEEEEC-----------------CCCCCHHHH
T ss_conf             -314----------5665641-----24899998642----0011486699963-----------------564436699


Q ss_pred             HHHHHCCCCEEEEE
Q ss_conf             99982588389984
Q gi|254780622|r  226 KSLAYFGAEVILIS  239 (405)
Q Consensus       226 ~~~~~~Ga~V~li~  239 (405)
                      ..+.-.||+|..--
T Consensus       226 ~~~rg~GA~ViVtE  239 (420)
T COG0499         226 MRLRGMGARVIVTE  239 (420)
T ss_pred             HHHHCCCCEEEEEE
T ss_conf             98622898699982


No 397
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=71.36  E-value=7.8  Score=18.71  Aligned_cols=115  Identities=14%  Similarity=0.106  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHH
Q ss_conf             99999999998798899985856863069899999747975--8207678877877430011446557884111888988
Q gi|254780622|r   20 KSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRV--YTHLLSYKEGYESNHIQLANECDLLVVAPASANFIAH   97 (405)
Q Consensus        20 k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v--~~~~~~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK   97 (405)
                      .+.-|.+.|.+.-..+++ +...   ++..+-.-|+.-.+.  .++.++.--.    | ....|.|+.|-|         
T Consensus        16 QaiaLa~~l~r~eyttk~-l~~~---~l~~lP~~wl~~yp~~~~~~l~~~~~~----r-~p~~~Pdl~I~a---------   77 (329)
T COG3660          16 QAIALAEQLTRSEYTTKL-LEYN---NLAKLPNFWLAYYPIHILRELFGPRLS----R-KPEQRPDLIITA---------   77 (329)
T ss_pred             HHHHHHHHHHCCCEEEEE-EECC---CCCCCCHHHHHCCCCHHHHHHHCCCCC----C-CCCCCCCEEEEC---------
T ss_conf             999999986046437899-5122---001274466512762767876367000----1-755798558861---------


Q ss_pred             HHCCCCCCHHHHHHHHCCCCCEEE---ECCCCCHHHHHHHHH--HHHHHHHHHCCCCCCCCHHH
Q ss_conf             520245521466675227996898---405660000038899--99999864000134652125
Q gi|254780622|r   98 VAHGMVYDLASAILLAKGDQPVLI---APAMNFMMWAKPATQ--RNVEILQKDGCYFIGPESGA  156 (405)
Q Consensus        98 ~A~GiaD~llt~~~la~~~~pi~i---aPaMn~~M~~~p~~~--~nl~~L~~~g~~vi~P~~g~  156 (405)
                         |..--+++--+-...+.+.+|   -|....+||+--++-  +.++.+...|..+ -|..|.
T Consensus        78 ---Grrta~l~~~lkk~~~~~~vVqI~~Prlp~~~fDlvivp~HD~~~~~s~~~~Ni-lpi~Gs  137 (329)
T COG3660          78 ---GRRTAPLAFYLKKKFGGIKVVQIQDPRLPYNHFDLVIVPYHDWREELSDQGPNI-LPINGS  137 (329)
T ss_pred             ---CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCCE-EECCCC
T ss_conf             ---521007899999861895389950799985302178426024666531157845-542688


No 398
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=71.26  E-value=6  Score=19.46  Aligned_cols=31  Identities=23%  Similarity=0.193  Sum_probs=18.5

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             56999952847899999999999987988999858
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      |+|.+.=+|-|-+-    ++-.+-.+|++|.++=.
T Consensus         8 k~VaVIGaG~MG~g----iAa~~a~~G~~V~l~D~   38 (321)
T PRK07066          8 KTFAAIGSGVIGSG----WVARALAHGLDVVAWDP   38 (321)
T ss_pred             CEEEEECCCHHHHH----HHHHHHHCCCEEEEEEC
T ss_conf             87999888788899----99999947985999969


No 399
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=71.15  E-value=7.9  Score=18.68  Aligned_cols=22  Identities=32%  Similarity=0.388  Sum_probs=11.2

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             7278899999998258838998
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li  238 (405)
                      ||=-|.+-|..|.++|++||+.
T Consensus       335 sGPAGLsaA~~Lar~G~~VTVF  356 (654)
T PRK12769        335 AGPAGLACADVLTRNGVAVTVY  356 (654)
T ss_pred             CCHHHHHHHHHHHHCCCEEEEE
T ss_conf             7789999999999769757995


No 400
>pfam01121 CoaE Dephospho-CoA kinase. This family catalyses the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form Coenzyme A EC:2.7.1.24. This enzyme uses ATP in its reaction.
Probab=71.08  E-value=2.9  Score=21.47  Aligned_cols=27  Identities=15%  Similarity=0.194  Sum_probs=18.0

Q ss_pred             EEEEEECHHHHHHHHHHHHHHHHCCCEE
Q ss_conf             9999528478999999999999879889
Q gi|254780622|r    8 IALIMCGSVAVYKSLDLIRRLRERGAVV   35 (405)
Q Consensus         8 IllgvtGsiaa~k~~~l~~~L~~~g~~V   35 (405)
                      +++|+||+|++-|+.- .+.|++.|+.|
T Consensus         1 ~iIgiTG~IgsGKStv-~~~l~~~G~~v   27 (179)
T pfam01121         1 LIVGLTGGIGSGKSTV-ANLFADLGVPI   27 (179)
T ss_pred             CEEEEECCCCCCHHHH-HHHHHHCCCCE
T ss_conf             9899857864789999-99999879919


No 401
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=71.04  E-value=4.5  Score=20.29  Aligned_cols=178  Identities=20%  Similarity=0.235  Sum_probs=87.7

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH--HHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             569999528478999999999999879889998585686--306989999974797582076788778774300114465
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ--KFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECD   83 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~--~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD   83 (405)
                      +++++.=.|-+    ...+++.|.+.|++|.+|-.....  +|...    ..-.+-+..+-++.....   -.. ...+|
T Consensus         1 m~iiIiG~G~v----G~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~---~ag-i~~aD   68 (225)
T COG0569           1 MKIIIIGAGRV----GRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLE---EAG-IDDAD   68 (225)
T ss_pred             CEEEEECCCHH----HHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----CCCEEEEEECCCCHHHHH---HCC-CCCCC
T ss_conf             98999898578----8999999987899089997688999986320----004499992688989998---679-86389


Q ss_pred             EEEEEECCHHHHHHHHCCCCCCHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHCC
Q ss_conf             5788411188898852024552146667522-79968984056600000388999999986400-013465212553103
Q gi|254780622|r   84 LLVVAPASANFIAHVAHGMVYDLASAILLAK-GDQPVLIAPAMNFMMWAKPATQRNVEILQKDG-CYFIGPESGAMAESN  161 (405)
Q Consensus        84 ~~iVaPaTaNtiaK~A~GiaD~llt~~~la~-~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g-~~vi~P~~g~la~c~  161 (405)
                      +++++=-.-.+          |++.+++... .+.|-++|=+      .+|.   +.+.|++.| -.++.|+.       
T Consensus        69 ~vva~t~~d~~----------N~i~~~la~~~~gv~~viar~------~~~~---~~~~~~~~g~~~ii~Pe~-------  122 (225)
T COG0569          69 AVVAATGNDEV----------NSVLALLALKEFGVPRVIARA------RNPE---HEKVLEKLGADVIISPEK-------  122 (225)
T ss_pred             EEEEEECCCHH----------HHHHHHHHHHHCCCCEEEEEE------CCCH---HHHHHHHCCCCEEECHHH-------
T ss_conf             99998088679----------999999999873998499995------6941---677898679948975589-------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             2233343455899999998631013200179778984042010102135762157727889999999825883899841
Q gi|254780622|r  162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                                 ..-..+.+.+..+.-     ..++-.+++   ...-+...-...+---|..|.+...+...++.++..
T Consensus       123 -----------~~~~~l~~~i~~p~~-----~~~~~~~~~---~~~~~~~~v~~~~~~~g~~L~el~~~~~~~~~vvai  182 (225)
T COG0569         123 -----------LAAKRLARLIVTPGA-----LDVLELAGG---DAEVIEEKVAEDSPLAGKTLRELDLRLPYDVNVIAI  182 (225)
T ss_pred             -----------HHHHHHHHHHCCCCH-----HEEEECCCC---CCEEEEEEECCCCCCCCCCHHHHCCCCCCCCEEEEE
T ss_conf             -----------999999998538863-----103442699---723899993589825775989932546788289999


No 402
>cd01134 V_A-ATPase_A V/A-type ATP synthase catalytic subunit A. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction.  The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase).  A similar protein is also found in a few bacteria.
Probab=70.93  E-value=5.7  Score=19.60  Aligned_cols=27  Identities=26%  Similarity=0.298  Sum_probs=22.8

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             772788999999982588389984156
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAEVILISGPV  242 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~V~li~g~~  242 (405)
                      .|--+|.+||++++.+|.+|-++...+
T Consensus       237 ~s~y~g~tiAEyfRd~G~~Vll~~Dsl  263 (369)
T cd01134         237 ASIYTGITIAEYFRDMGYNVALMADST  263 (369)
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEECCH
T ss_conf             889899999999996898879980758


No 403
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=70.62  E-value=8.1  Score=18.60  Aligned_cols=35  Identities=26%  Similarity=0.293  Sum_probs=26.4

Q ss_pred             EEEEEE----------ECHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             699995----------284789999999999998798899985856
Q gi|254780622|r    7 KIALIM----------CGSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus         7 ~Illgv----------tGsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      ||++..          -||+..+ +.+|++.|.+.|++|.++.+..
T Consensus         2 kI~~v~~~~~p~pP~~~GG~e~~-~~~La~~L~~~Gh~V~v~~~~~   46 (335)
T cd03802           2 RIALVAPPREPVPPPAYGGTERV-VAALTEGLVARGHEVTLFASGD   46 (335)
T ss_pred             EEEEECCCCCCCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECCC
T ss_conf             86998884003699998979999-9999999997699899996289


No 404
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=70.56  E-value=8.2  Score=18.59  Aligned_cols=157  Identities=15%  Similarity=0.223  Sum_probs=90.0

Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH--------EECCEEEEECCCCCHHHH----HHHHHHHHCCCCEE
Q ss_conf             455899999998631013200179778984042010--------102135762157727889----99999982588389
Q gi|254780622|r  169 SEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE--------PLDPMRYIANRSSGQQGH----AIAKSLAYFGAEVI  236 (405)
Q Consensus       169 ~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E--------~ID~VR~ItN~SSGk~G~----~iA~~~~~~Ga~V~  236 (405)
                      ..|..++..+.+.+        .+..++++-+|+.-        .-+|-||++..+.|-||+    +|.-.+...+..|.
T Consensus       375 i~p~~~~~~l~~~l--------~~d~iv~~D~G~~~~~~~~~~~~~~~~~~~~~~~~G~mG~glpaAiGA~lA~p~r~Vv  446 (571)
T PRK07710        375 IKPQYAIDMLYEIT--------KGEAIVTTDVGQHQMWAAQYYPLKTPDKWVTSGGLGTMGFGLPAAIGAQIAKPDELVV  446 (571)
T ss_pred             CCHHHHHHHHHHHC--------CCCEEEEECCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCEEE
T ss_conf             49999999999867--------9984999658730688886514678962420688776566408999999738998389


Q ss_pred             EEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH----HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH
Q ss_conf             9841566776567467546577899999985058887997404----444432222101123345577510455218068
Q gi|254780622|r  237 LISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA----VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI  312 (405)
Q Consensus       237 li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA----VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI  312 (405)
                      ++.|-.+.          --+.+|+..++...++.-++|+.=.    +..+.- ...+++.   .     .-.+..+||.
T Consensus       447 ~i~GDG~f----------~m~~qEL~Ta~r~~lpv~ivV~NN~~yg~ir~~q~-~~~~~~~---~-----~~~~~~~pdf  507 (571)
T PRK07710        447 AIVGDAGF----------QMTLQELSVLKEHSLPVKVFILNNEALGMVRQWQE-EFYNQRY---S-----HSLLSCQPDF  507 (571)
T ss_pred             EEECCHHH----------HCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHCCCCC---C-----CCCCCCCCCH
T ss_conf             99778056----------43699999999959993899997871489999999-8628877---7-----6667899999


Q ss_pred             HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             988762148995899981141238999999999749989999205
Q gi|254780622|r  313 LKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCI  357 (405)
Q Consensus       313 L~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i  357 (405)
                      .+ +.+--.    +-|+..++.+-++.|.++..+.+-=.+|-=.+
T Consensus       508 ~~-~A~a~G----~~g~~V~~~~el~~Al~~Al~~~gP~lIeV~v  547 (571)
T PRK07710        508 VA-LAEAYG----IKGVRIDDPLEAKEQLQHAITLQEPVVIDCRV  547 (571)
T ss_pred             HH-HHHHCC----CEEEEECCHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf             99-999779----98999799999999999998189969999997


No 405
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=70.43  E-value=8.2  Score=18.58  Aligned_cols=14  Identities=36%  Similarity=0.394  Sum_probs=6.8

Q ss_pred             HHHHHHHHHHHHCC
Q ss_conf             89999999864000
Q gi|254780622|r  134 ATQRNVEILQKDGC  147 (405)
Q Consensus       134 ~~~~nl~~L~~~g~  147 (405)
                      .+.+|++...+.|.
T Consensus        81 ~~~~~l~~~~~~~~   94 (266)
T COG0289          81 ATLENLEFALEHGK   94 (266)
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             46999999997699


No 406
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level HMM (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=70.41  E-value=8.2  Score=18.57  Aligned_cols=80  Identities=11%  Similarity=0.130  Sum_probs=33.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE----EECCCHHEECCEE---------EEECCCCCHHHHHHHHHHHH
Q ss_conf             3334345589999999863101320017977898----4042010102135---------76215772788999999982
Q gi|254780622|r  164 GVGRMSEPCDIIRQITWLLYKSKELLLKGKRALV----TSGPTYEPLDPMR---------YIANRSSGQQGHAIAKSLAY  230 (405)
Q Consensus       164 G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlI----TaG~T~E~ID~VR---------~ItN~SSGk~G~~iA~~~~~  230 (405)
                      ..|+-.++++|-+.+..    .++    =+.|.+    |+-|+.-+++.+.         ++---+|.--|.-+-  .-.
T Consensus       106 ~~g~~~~~~~v~~~l~~----~~~----~~~v~~~h~ETstGv~~~~~~i~~~~~~~~~llvVDavSs~g~~p~d--~~~  175 (355)
T TIGR03301       106 SEYEPPDLNRIEEALAA----DPD----ITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID--IEE  175 (355)
T ss_pred             CCCCCCCHHHHHHHHHC----CCC----CCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCC--CCC
T ss_conf             88778998999999725----778----54899950126787417537665665047964999745643568642--011


Q ss_pred             CCCCEEEEECCCCCCCCCCEEEE
Q ss_conf             58838998415667765674675
Q gi|254780622|r  231 FGAEVILISGPVSIADPPNVMTI  253 (405)
Q Consensus       231 ~Ga~V~li~g~~~~~~~~~~~~i  253 (405)
                      -|.++.+-.+.-.+..|+|+..+
T Consensus       176 ~gvD~~~~~sQK~l~~ppGl~~v  198 (355)
T TIGR03301       176 LDVDALIASANKCLEGVPGFGFV  198 (355)
T ss_pred             CCEEEEEECCCCCCCCCCCEEEE
T ss_conf             56589995365556788875788


No 407
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=70.36  E-value=8.2  Score=18.57  Aligned_cols=18  Identities=22%  Similarity=0.278  Sum_probs=7.0

Q ss_pred             EEEEEEECHHHHHHHHHH
Q ss_conf             699995284789999999
Q gi|254780622|r    7 KIALIMCGSVAVYKSLDL   24 (405)
Q Consensus         7 ~IllgvtGsiaa~k~~~l   24 (405)
                      |||+++.+|-.+.++.+.
T Consensus         1 ~Ilv~vd~s~~s~~al~~   18 (130)
T cd00293           1 RILVAVDGSEESERALRW   18 (130)
T ss_pred             CEEEEECCCHHHHHHHHH
T ss_conf             999998989899999999


No 408
>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family. A family of closely related, thiamine pyrophosphate-dependent enzymes includes indolepyruvate decarboxylase (EC 4.1.1.74), phenylpyruvate decarboxylase (EC 4.1.1.43), pyruvate decarboxylase (EC 4.1.1.1), branched-chain alpha-ketoacid decarboxylase, etc.. Members of this group of homologs may overlap in specificity. This model represents a clade that includes a Azospirillum brasilense member active as both phenylpyruvate decarboxylase and indolepyruvate decarboxylase.
Probab=70.33  E-value=8.2  Score=18.56  Aligned_cols=24  Identities=21%  Similarity=0.414  Sum_probs=10.6

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCC
Q ss_conf             5569999528478999999999999879
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERG   32 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g   32 (405)
                      |-+-++|+.|+-    ...+...|.+.|
T Consensus        14 GV~~vFGipG~~----~~~~~dal~~~~   37 (535)
T TIGR03394        14 GAQEMFGIPGDF----ALPFFKVIEETG   37 (535)
T ss_pred             CCCEEEECCCHH----HHHHHHHHHHCC
T ss_conf             999999877763----999999998689


No 409
>TIGR01578 MiaB-like-B MiaB-like tRNA modifying enzyme, archaeal-type; InterPro: IPR006466   This clade of sequences is closely related to MiaB, a modifier of isopentenylated adenosine-37 of certain eukaryotic and bacterial tRNAs (see IPR006463 from INTERPRO). Sequence alignments suggest that this family of sequences perform the same chemical transformation as MiaB, perhaps on a different (or differently modified) tRNA base substrate. This clade represents a subfamily that spans the archaea and eukaryotes. The only archaeal miaB-like genes are in this group of sequences , , ..
Probab=70.18  E-value=8.3  Score=18.54  Aligned_cols=187  Identities=18%  Similarity=0.194  Sum_probs=98.6

Q ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHHCCC------CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEEC
Q ss_conf             89999999864000134652125531032------233343455899999998631013200179778984042010102
Q gi|254780622|r  134 ATQRNVEILQKDGCYFIGPESGAMAESNG------YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLD  207 (405)
Q Consensus       134 ~~~~nl~~L~~~g~~vi~P~~g~la~c~~------~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID  207 (405)
                      .+....+.++..-+.+++=..|=+..|..      .|+=.-+.||+|+..+..++..+-      |.|.|||-=|--|=-
T Consensus       132 ~~~~~~~~~~~~~i~i~pI~~GC~~~CsYCi~K~ARG~L~S~PpEkiV~~ar~l~~~G~------kEI~iTs~DT~~YG~  205 (487)
T TIGR01578       132 TLLKEPEPRKNPLIEILPINQGCLGNCSYCITKIARGKLASYPPEKIVEKARELVAEGA------KEIWITSQDTAAYGK  205 (487)
T ss_pred             HHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCC------CEEEECCCCCCCCCC
T ss_conf             00032023146775555436663568875467776445248872256899999997053------126513446663442


Q ss_pred             CEEEEECCCCCHHHHH-HHHHHHHCCCCEEEEECCCCCC----CCCCEEEEEHHHHHHHHHHHHHCCCC-CEE---EEE-
Q ss_conf             1357621577278899-9999982588389984156677----65674675465778999999850588-879---974-
Q gi|254780622|r  208 PMRYIANRSSGQQGHA-IAKSLAYFGAEVILISGPVSIA----DPPNVMTIHVERAEDMLQEVLKALPV-DIA---VMV-  277 (405)
Q Consensus       208 ~VR~ItN~SSGk~G~~-iA~~~~~~Ga~V~li~g~~~~~----~~~~~~~i~v~t~~em~~~~~~~~~~-D~~---I~a-  277 (405)
                      +           +|.. |++=+.+   -+|-|-|..-+-    .|+        ++.+-++.+.+.+.. |=+   .|. 
T Consensus       206 D-----------iG~~kLPeLL~~---~~t~I~g~F~~RVGMmnP~--------~~~~IldeL~~v~~~h~kV~kFLHlP  263 (487)
T TIGR01578       206 D-----------IGERKLPELLRR---LITEIPGDFRLRVGMMNPK--------NVLEILDELIEVFQSHDKVYKFLHLP  263 (487)
T ss_pred             C-----------CCCCCCHHHHHH---HHHHCCCCCEEEEECCCCC--------CHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             2-----------376212799999---9862599327876258876--------33478899999985488200011542


Q ss_pred             -HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCC-----CEEEEEECCCCHHHHHHHHHHHHCCCCE
Q ss_conf             -0444443222210112334557751045521806898876214899-----5899981141238999999999749989
Q gi|254780622|r  278 -SAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRP-----SIVVGFAAETQCIEQNAREKLLNKGADF  351 (405)
Q Consensus       278 -AAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~-----~~lVGFkaET~~l~~~A~~Kl~~K~~D~  351 (405)
                       =--||+..     .+.+|.       -+...-.||+..++++ .++     .++|||..||||.-|+..+-+++..=+.
T Consensus       264 vQSGsD~VL-----~~M~R~-------y~v~~f~~Iv~~FR~~-~~~~tl~TDiIvGFp~EtdddFE~T~~l~~k~RPe~  330 (487)
T TIGR01578       264 VQSGSDSVL-----KEMKRE-------YTVDDFEDIVEKFRER-FPDLTLSTDIIVGFPTETDDDFEETMELLRKYRPEK  330 (487)
T ss_pred             CCCCCHHHH-----HHCCCC-------CCHHHHHHHHHHHHHH-HCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCE
T ss_conf             015875889-----744856-------5257789999999876-268647300167178988355899999999828983


Q ss_pred             EEEECCCCCC
Q ss_conf             9992057767
Q gi|254780622|r  352 IVSNCILPDT  361 (405)
Q Consensus       352 IVAN~i~~~~  361 (405)
                      |-.|.-++..
T Consensus       331 In~~~fS~Rp  340 (487)
T TIGR01578       331 INVTKFSPRP  340 (487)
T ss_pred             EEEECCCCCC
T ss_conf             4530246888


No 410
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=69.98  E-value=6.2  Score=19.35  Aligned_cols=33  Identities=18%  Similarity=0.234  Sum_probs=28.1

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             79778984042010102135762157727889999999825883899841
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      .+|+|+|-+|                 |-.|.++|..+..+|.+||+|.-
T Consensus       143 ~~k~vvVIGg-----------------G~IGlE~A~~l~~~G~~Vtvve~  175 (400)
T PRK09754        143 PERSVVIVGA-----------------GTIGLELAASATQRRCKVTVIEL  175 (400)
T ss_pred             CCCEEEEECC-----------------CHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             5873999885-----------------58999999999975994899953


No 411
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=69.82  E-value=8.5  Score=18.49  Aligned_cols=176  Identities=18%  Similarity=0.162  Sum_probs=100.4

Q ss_pred             EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
Q ss_conf             98405660000038899999998640001346521255310322333434558999999986310132001797789840
Q gi|254780622|r  120 LIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTS  199 (405)
Q Consensus       120 ~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITa  199 (405)
                      .+-|--...-.+....+++++.|.+.|+.=+-+       ||..|.+-....++-..-+.......     .|+ +.|-+
T Consensus         8 ~iTPF~~dg~iD~~~~~~~i~~l~~~Gv~gi~v-------~GstGE~~~Ls~eEr~~v~~~~~~~~-----~g~-~~vi~   74 (289)
T cd00951           8 PVTHFDADGSFDEDAYRAHVEWLLSYGAAALFA-------AGGTGEFFSLTPDEYAQVVRAAVEET-----AGR-VPVLA   74 (289)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CCHHHCCCCCCHHHHHHHHHHHHHHC-----CCC-CEEEE
T ss_conf             138768995979999999999999779999997-------93300621289999999999999981-----898-51740


Q ss_pred             CCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH
Q ss_conf             42010102135762157727889999999825883899841566776567467546577899999985058887997404
Q gi|254780622|r  200 GPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA  279 (405)
Q Consensus       200 G~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA  279 (405)
                      |.+            .++ +--..+|+++...|++-.++.-|       ++....-+...+.++++.++.+..+++-.  
T Consensus        75 g~g------------~~t-~~~i~la~~a~~~Gadav~v~pP-------y~~~~~~~~l~~~~~~ia~a~~lpi~lYn--  132 (289)
T cd00951          75 GAG------------YGT-ATAIAYAQAAEKAGADGILLLPP-------YLTEAPQEGLYAHVEAVCKSTDLGVIVYN--  132 (289)
T ss_pred             CCC------------CHH-HHHHHHHHHHHHCCCCEEEECCC-------CCCCCCHHHHHHHHHHHHHHCCCCEEECC--
T ss_conf             676------------319-99999999999759999997698-------88899999999999999984699866148--


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             444432222101123345577510455218068988762148995899981141238999999999749989999205
Q gi|254780622|r  280 VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCI  357 (405)
Q Consensus       280 VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i  357 (405)
                              .        ..     .  .-+|+.+..+.+ +.|  -++|+|--+.++. +..+-..+-+-++.+.+.+
T Consensus       133 --------~--------~~-----~--~~~~~~l~~L~~-~~p--~i~giK~s~~d~~-~~~~~~~~~~~~~~~~~g~  183 (289)
T cd00951         133 --------R--------AN-----A--VLTADSLARLAE-RCP--NLVGFKDGVGDIE-LMRRIVAKLGDRLLYLGGL  183 (289)
T ss_pred             --------C--------CC-----C--CCCHHHHHHHHH-HCC--CEEEEEECCCCHH-HHHHHHHHCCCCCEEEECC
T ss_conf             --------8--------77-----6--778999999998-368--7899997888999-9999999759982898589


No 412
>COG4081 Uncharacterized protein conserved in archaea [Function unknown]
Probab=69.48  E-value=8.4  Score=18.51  Aligned_cols=27  Identities=26%  Similarity=0.404  Sum_probs=22.8

Q ss_pred             HHHHHHHHHHCCCEEEEEECHHHHHHC
Q ss_conf             999999999879889998585686306
Q gi|254780622|r   21 SLDLIRRLRERGAVVIPVMTKSAQKFI   47 (405)
Q Consensus        21 ~~~l~~~L~~~g~~V~vv~T~~A~~fi   47 (405)
                      +..+...|++.|++|.|..|++|++++
T Consensus        21 aiYls~klkkkgf~v~VaateAa~kLl   47 (148)
T COG4081          21 AIYLSHKLKKKGFDVTVAATEAALKLL   47 (148)
T ss_pred             HHHHHHHHHCCCCCEEEECCHHHHEEE
T ss_conf             898887763058517996287662105


No 413
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=69.38  E-value=7.6  Score=18.79  Aligned_cols=27  Identities=22%  Similarity=0.182  Sum_probs=23.0

Q ss_pred             ECHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             2847899999999999987988999858
Q gi|254780622|r   13 CGSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus        13 tGsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      +||++-+ +-.|.+.|.+.|++|.||+-
T Consensus        15 vGGLg~v-v~~L~~aLa~~Gh~V~Vi~P   41 (476)
T cd03791          15 TGGLGDV-VGALPKALAKLGHDVRVIMP   41 (476)
T ss_pred             CCCHHHH-HHHHHHHHHHCCCEEEEEEC
T ss_conf             2679999-99999999977996999957


No 414
>TIGR02415 23BDH acetoin reductases; InterPro: IPR014007   One member of this family, as characterised in Klebsiella terrigena , is able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also capable of irreversible reduction of diacetyl with NADH to acetoin. There has been a reuctance to classify the enzyme as either 1.1.1.4 from EC, which is (R,R)-butanediol dehydrogenase, or 1.1.1.5 from EC, which is acetoin dehydrogenase without a specified stereochemistry . Another member of this family, from Corynebacterium glutamicum (Brevibacterium flavum), is called L-2,3-butanediol dehydrogenase .    This enzyme is a homotetramer in the family of short chain dehydrogenases (IPR002198 from INTERPRO). .
Probab=69.24  E-value=7.9  Score=18.68  Aligned_cols=69  Identities=26%  Similarity=0.433  Sum_probs=43.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
Q ss_conf             6600000388999999986400013465212553103223334345589999999863101320017977898404
Q gi|254780622|r  125 MNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSG  200 (405)
Q Consensus       125 Mn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG  200 (405)
                      -.|.||+.  ..+.+.++.  |-.-++-.....  +.+.--||..+|||+..-+.++-.. ...+.-|.-+||=+|
T Consensus       186 V~T~M~~~--Id~~~~~~~--gSk~i~~~~~~f--ss~I~LGR~~~PeDVA~lVSFLAS~-dSdYiTGQsilvDGG  254 (258)
T TIGR02415       186 VKTEMWEE--IDEKTVELA--GSKPIGEGFEEF--SSEIKLGRLSEPEDVAGLVSFLASE-DSDYITGQSILVDGG  254 (258)
T ss_pred             CCCHHHHH--HHHHHHHHC--CCCCHHHHHHHH--HHHCCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCEEEECCC
T ss_conf             50541799--999998732--770067899998--7531379899971388788985147-678012653445174


No 415
>pfam03033 Glyco_transf_28 Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities.
Probab=69.23  E-value=3.8  Score=20.71  Aligned_cols=31  Identities=35%  Similarity=0.347  Sum_probs=24.7

Q ss_pred             EEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf             8984042010102135762157727889999999825883899
Q gi|254780622|r  195 ALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVIL  237 (405)
Q Consensus       195 vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~l  237 (405)
                      |++++|||--.+=|            +.+||+++..+|++|.+
T Consensus         1 Ilia~GGTGGHv~P------------alala~~L~~~g~~v~i   31 (136)
T pfam03033         1 VLLAGGGTRGHVFP------------AVALAWALRRRGHEVRL   31 (136)
T ss_pred             CEEEECCCHHHHHH------------HHHHHHHHHHCCCEEEE
T ss_conf             98994415799999------------99999999985997712


No 416
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated
Probab=69.21  E-value=8.7  Score=18.41  Aligned_cols=84  Identities=21%  Similarity=0.259  Sum_probs=52.6

Q ss_pred             CCEEEEEEECHHH--HHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCC-CCCCCCCCC-CCCCCCCCC
Q ss_conf             5569999528478--999999999999879889998585686306989999974797582-076788778-774300114
Q gi|254780622|r    5 GKKIALIMCGSVA--VYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYT-HLLSYKEGY-ESNHIQLAN   80 (405)
Q Consensus         5 ~k~IllgvtGsia--a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~-~~~~~~~~~-~~~Hi~l~~   80 (405)
                      =++|++.-|+|-+  ..=+.-|+|.|+++|..|.++=  ..-.||.|...+.++|++++. |.|-..+.. ...-..++.
T Consensus         3 ~p~lmI~gt~S~~GKT~vt~gL~r~l~~rG~~VapFK--~GPDyIdp~~~~~a~g~~~~nLD~~l~~~~~v~~~~~~~~~   80 (451)
T PRK01077          3 MPALVIAAPASGSGKTTVTLGLMRALRRRGLRVQPFK--VGPDYIDPAFHAAATGRPSRNLDSWMMGEDLVRALFARAAG   80 (451)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHCC
T ss_conf             8879998689999789999999999996879457535--78576298999999789753588344899999999997546


Q ss_pred             CCCEEEEEEC
Q ss_conf             4655788411
Q gi|254780622|r   81 ECDLLVVAPA   90 (405)
Q Consensus        81 ~aD~~iVaPa   90 (405)
                      .+|+.||=-+
T Consensus        81 ~~D~~viEG~   90 (451)
T PRK01077         81 GADIAVIEGV   90 (451)
T ss_pred             CCCEEEEEEC
T ss_conf             6888998501


No 417
>COG5157 CDC73 RNA polymerase II assessory factor [Transcription]
Probab=69.20  E-value=4.4  Score=20.29  Aligned_cols=79  Identities=23%  Similarity=0.376  Sum_probs=50.2

Q ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC-
Q ss_conf             2799689840566000003889999999864000134652125531032233343455899999998631013200179-
Q gi|254780622|r  114 KGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKG-  192 (405)
Q Consensus       114 ~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~g-  192 (405)
                      +++-||++.|.--    .+|.|..|+++.-+.|. +|.|+.  ++.|-+  -||+.+.+.....            +.| 
T Consensus       202 ~~kDPIIlvp~sa----SS~lt~~NIK~FleEgk-yV~P~n--~~~~~~--G~~i~~~eK~~~~------------~~g~  260 (362)
T COG5157         202 YAKDPIILVPQSA----SSPLTLSNIKEFLEEGK-YVNPRN--LPSCSD--GIRISEVEKVELD------------LDGP  260 (362)
T ss_pred             CCCCCEEEECCCC----CCCEEHHHHHHHHHHCC-CCCCCC--CCCCCC--CCEEEEEEEHHHC------------CCCC
T ss_conf             2689648836224----66302887999997067-568422--556899--8067754302230------------4685


Q ss_pred             CEEEE---EECCCHHEECCEEEEE
Q ss_conf             77898---4042010102135762
Q gi|254780622|r  193 KRALV---TSGPTYEPLDPMRYIA  213 (405)
Q Consensus       193 k~vlI---TaG~T~E~ID~VR~It  213 (405)
                      .+.+|   |.|=+.||.|.|-+|=
T Consensus       261 ~rfIiVd~t~~FkpeyWdRVVciF  284 (362)
T COG5157         261 FRFIIVDDTGGFKPEYWDRVVCIF  284 (362)
T ss_pred             EEEEEECCCCCCCHHHHCEEEEEE
T ss_conf             589998578886841202379999


No 418
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=68.76  E-value=7.7  Score=18.75  Aligned_cols=132  Identities=20%  Similarity=0.318  Sum_probs=64.1

Q ss_pred             CEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCC-HHHHHHC
Q ss_conf             55788411188898852024552146667522799689840566000003889999999864000134-652-1255310
Q gi|254780622|r   83 DLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFI-GPE-SGAMAES  160 (405)
Q Consensus        83 D~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi-~P~-~g~la~c  160 (405)
                      .-.||=|.|.||      ||+   |..++.+..-+-+++.|.   .|     .++-.+.|+.+|..++ -|. .|.+   
T Consensus        62 G~tIVE~TSGNT------GIa---LA~vaa~~Gy~~~ivmP~---~~-----S~er~~~l~a~GAevi~t~~~~g~~---  121 (300)
T COG0031          62 GGTIVEATSGNT------GIA---LAMVAAAKGYRLIIVMPE---TM-----SQERRKLLRALGAEVILTPGAPGNM---  121 (300)
T ss_pred             CCEEEEECCCHH------HHH---HHHHHHHCCCCEEEEECC---CC-----CHHHHHHHHHCCCEEEECCCCCCCH---
T ss_conf             998997089727------999---999999819928999589---89-----9999999998299899837987745---


Q ss_pred             CCCCCCCCCCHHHHHHHHHH-HHHC---CCCCCCCCCEEEEEECCC-HHEEC--CEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf             32233343455899999998-6310---132001797789840420-10102--13576215772788999999982588
Q gi|254780622|r  161 NGYGVGRMSEPCDIIRQITW-LLYK---SKELLLKGKRALVTSGPT-YEPLD--PMRYIANRSSGQQGHAIAKSLAYFGA  233 (405)
Q Consensus       161 ~~~G~grl~e~~~I~~~~~~-~~~~---~~~~~l~gk~vlITaG~T-~E~ID--~VR~ItN~SSGk~G~~iA~~~~~~Ga  233 (405)
                          +|+...-.++....-. .+..   .++.++.- |-- |.|+- ++..|  +--|+.-..||=+=.-+++++..+..
T Consensus       122 ----~~a~~~a~el~~~~p~~~~~~~Qf~NpaN~~a-H~~-tT~~EI~~~~~~~~d~fVagvGTGGTitGvar~Lk~~~p  195 (300)
T COG0031         122 ----KGAIERAKELAAEIPGYAVWLNQFENPANPEA-HYE-TTGPEIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNP  195 (300)
T ss_pred             ----HHHHHHHHHHHHHCCCCEECHHHCCCCCCHHH-HHH-HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf             ----99999999999749883675534389647898-976-128999997379999899937852658999999986289


Q ss_pred             CEEEEEC
Q ss_conf             3899841
Q gi|254780622|r  234 EVILISG  240 (405)
Q Consensus       234 ~V~li~g  240 (405)
                      ++.+|.-
T Consensus       196 ~i~iv~v  202 (300)
T COG0031         196 NVRIVAV  202 (300)
T ss_pred             CCEEEEE
T ss_conf             8379997


No 419
>PRK04965 nitric oxide reductase; Provisional
Probab=68.72  E-value=6.4  Score=19.26  Aligned_cols=33  Identities=33%  Similarity=0.534  Sum_probs=28.7

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             79778984042010102135762157727889999999825883899841
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      ..|+|+|-+|                 |-.|.++|..+..+|.+||+|+.
T Consensus       140 ~~krvvVIGg-----------------G~IG~E~A~~L~~~G~~Vtvve~  172 (378)
T PRK04965        140 DAQRVLVVGG-----------------GLIGTELAMDLCRAGKAVTLVDN  172 (378)
T ss_pred             CCCEEEEECC-----------------CHHHHHHHHHHHHCCCEEEEECC
T ss_conf             4978999898-----------------38899999999967988999766


No 420
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=68.61  E-value=9  Score=18.33  Aligned_cols=241  Identities=16%  Similarity=0.129  Sum_probs=127.7

Q ss_pred             EEEEEEECHH-----HHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             6999952847-----89999999999998798899985856863069899999747975820767887787743001144
Q gi|254780622|r    7 KIALIMCGSV-----AVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANE   81 (405)
Q Consensus         7 ~IllgvtGsi-----aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~   81 (405)
                      ||++-.-||.     -.+++..|+|.|.+.|+.+-.+-++..+.|+++ .++ .++...+.+..         -|. +..
T Consensus         2 ~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~-~~~-~f~~~~~~~~n---------~ik-~~k   69 (318)
T COG3980           2 KVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHK-VYE-GFKVLEGRGNN---------LIK-EEK   69 (318)
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH-HHH-HCCCEEEECCC---------CCC-CCC
T ss_conf             579992687555751345599999999851746888406625642156-665-10430023364---------100-366


Q ss_pred             CCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHH--HHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             65578841118889885202455214666752279968984056600000--3889999999864000134652125531
Q gi|254780622|r   82 CDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWA--KPATQRNVEILQKDGCYFIGPESGAMAE  159 (405)
Q Consensus        82 aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~--~p~~~~nl~~L~~~g~~vi~P~~g~la~  159 (405)
                      .|++|+=-          .|+.-+..-.+-.- ...+++++--||..-..  .-++-.++...+   +++..|..-.+  
T Consensus        70 ~d~lI~Ds----------ygl~~dd~k~ik~e-~~~k~l~fDd~~~~~~~d~d~ivN~~~~a~~---~y~~v~~k~~~--  133 (318)
T COG3980          70 FDLLIFDS----------YGLNADDFKLIKEE-AGSKILIFDDENAKSFKDNDLIVNAILNAND---YYGLVPNKTRY--  133 (318)
T ss_pred             CCEEEEEC----------CCCCHHHHHHHHHH-HCCCEEEECCCCCCCHHHHHHHHHHHHCCHH---HCCCCCCCEEE--
T ss_conf             77899942----------68887899998897-3881799647776422566735455535112---20536766379--


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             03223334345589999999863101320017977898404201010213576215772788999999982588389984
Q gi|254780622|r  160 SNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS  239 (405)
Q Consensus       160 c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~  239 (405)
                        ..|.+-.|=.++-+..-.....+      .-+.||||-|||--            ++.++ .+..++...-....++.
T Consensus       134 --~lGp~y~~lr~eF~~~r~~~~~r------~~r~ilI~lGGsDp------------k~lt~-kvl~~L~~~~~nl~iV~  192 (318)
T COG3980         134 --YLGPGYAPLRPEFYALREENTER------PKRDILITLGGSDP------------KNLTL-KVLAELEQKNVNLHIVV  192 (318)
T ss_pred             --EECCCCEECCHHHHHHHHHHHHC------CHHEEEEECCCCCH------------HHHHH-HHHHHHHCCCEEEEEEE
T ss_conf             --96587114169999868998635------31128997168872------------44599-99998403570499994


Q ss_pred             CCCC---CCC------CCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH
Q ss_conf             1566---776------5674675465778999999850588879974044444322221011233455775104552180
Q gi|254780622|r  240 GPVS---IAD------PPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP  310 (405)
Q Consensus       240 g~~~---~~~------~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p  310 (405)
                      |..+   ...      .+.++  ....+++|-+-+.   ++|..|.||--+=|-.--   -++      ..|.|.+.+|.
T Consensus       193 gs~~p~l~~l~k~~~~~~~i~--~~~~~~dma~LMk---e~d~aI~AaGstlyEa~~---lgv------P~l~l~~a~NQ  258 (318)
T COG3980         193 GSSNPTLKNLRKRAEKYPNIN--LYIDTNDMAELMK---EADLAISAAGSTLYEALL---LGV------PSLVLPLAENQ  258 (318)
T ss_pred             CCCCCCHHHHHHHHHHCCCEE--EEECCHHHHHHHH---HCCHHEECCCHHHHHHHH---HCC------CCEEEEEECCH
T ss_conf             688854667888886578802--6862245899998---603331446357999998---269------82587633017


No 421
>PRK05038 consensus
Probab=68.52  E-value=9  Score=18.32  Aligned_cols=19  Identities=26%  Similarity=0.235  Sum_probs=10.5

Q ss_pred             CCCHHHHHHHHHHHHCCCC
Q ss_conf             7727889999999825883
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAE  234 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~  234 (405)
                      |||.+=..-|+.+..+||.
T Consensus       224 dTGgTl~~aa~~Lk~~GA~  242 (315)
T PRK05038        224 DTGGTLCKAAEALKERGAK  242 (315)
T ss_pred             CCHHHHHHHHHHHHHCCCC
T ss_conf             2515899999999965998


No 422
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=68.46  E-value=9  Score=18.31  Aligned_cols=93  Identities=18%  Similarity=0.271  Sum_probs=49.4

Q ss_pred             HHHHCCCC-EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEE
Q ss_conf             99825883-89984156677656746754657789999998505888799740444443222210112334557751045
Q gi|254780622|r  227 SLAYFGAE-VILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRID  305 (405)
Q Consensus       227 ~~~~~Ga~-V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~  305 (405)
                      .+...|.+ |++++|......|.                   ..|||.+|.+||+.|- |+.-.++ +|  . +..|.+.
T Consensus       119 ~L~~lG~~NV~vv~GDG~~G~pe-------------------~APYD~IIVTAaa~~I-P~aLldQ-Lk--~-GGRLViP  174 (317)
T PRK13943        119 NVERLGIENVIFVCGDGYYGVPE-------------------FSPYDVIFVTVGVDEV-PETWFTQ-LK--E-GGRVIVP  174 (317)
T ss_pred             HHHHCCCCCEEEEECCCCCCCCC-------------------CCCCCEEEEEECCCCC-CHHHHHH-CC--C-CCEEEEE
T ss_conf             99977998649997998888866-------------------7997789998527648-9999996-18--5-9699998


Q ss_pred             EEECHHHHH----HHHHCCCCCCEEEEEECCC---------CHHHHHHHHHHHH
Q ss_conf             521806898----8762148995899981141---------2389999999997
Q gi|254780622|r  306 LMENPDILK----IIGHHQCRPSIVVGFAAET---------QCIEQNAREKLLN  346 (405)
Q Consensus       306 L~~~pdIL~----~i~~~k~~~~~lVGFkaET---------~~l~~~A~~Kl~~  346 (405)
                      +.  -++++    .+- .|..+.+.=+|++||         +++.++-+++|..
T Consensus       175 vn--~~~~~~q~~~~~-~k~~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~l~~  225 (317)
T PRK13943        175 IN--LKLSRRQPAFLF-KKKDPYLVGNYKLETRFITAGGNLGNLLERNRKLLRE  225 (317)
T ss_pred             EE--EEEECCCCCEEE-EECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHC
T ss_conf             41--065056865357-7437764343589998886478613216778999864


No 423
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=68.32  E-value=9.1  Score=18.29  Aligned_cols=35  Identities=26%  Similarity=0.304  Sum_probs=25.6

Q ss_pred             EEEEEE------ECHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             699995------284789999999999998798899985856
Q gi|254780622|r    7 KIALIM------CGSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus         7 ~Illgv------tGsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      |||+.+      .||+.-+ +.+|++.|.+.|++|+++.+..
T Consensus         1 KIl~i~~~~~P~~GG~e~~-~~~la~~L~~~Gh~V~v~t~~~   41 (375)
T cd03821           1 KILHVIPSFDPKYGGPVRV-VLNLSKALAKLGHEVTVATTDA   41 (375)
T ss_pred             CEEEEECCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECCC
T ss_conf             9899959889999989999-9999999997799899997079


No 424
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed
Probab=68.28  E-value=4  Score=20.59  Aligned_cols=74  Identities=15%  Similarity=0.250  Sum_probs=46.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECC----EEEEEC---------------CCCCHHHHH
Q ss_conf             2333434558999999986310132001797789840420101021----357621---------------577278899
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDP----MRYIAN---------------RSSGQQGHA  223 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~----VR~ItN---------------~SSGk~G~~  223 (405)
                      .|.|++.++..+.-..    .......+..++++|-.|.+.-.+-.    =+.++.               --.|-.|.+
T Consensus       111 ~G~a~f~~~~~v~V~~----~~~~~~~i~a~~iiIATGs~p~~lPg~~~~~~~~~~~~~~~~~~lPk~v~IiGgG~ig~E  186 (467)
T PRK07818        111 HGYGTFTDANTLEVDL----NDGGTETVTFDNAIIATGSSTRLLPGTSLSENVVTYEEQILSRELPKSIVIAGAGAIGME  186 (467)
T ss_pred             ECEEEEECCCEEEEEC----CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCEEEEECCCHHHHH
T ss_conf             4307982485138971----789627999526898768876657886788877853577233458966999998799999


Q ss_pred             HHHHHHHCCCCEEEEEC
Q ss_conf             99999825883899841
Q gi|254780622|r  224 IAKSLAYFGAEVILISG  240 (405)
Q Consensus       224 iA~~~~~~Ga~V~li~g  240 (405)
                      +|..+...|.+||+|.-
T Consensus       187 ~A~~~~~lG~~Vtiv~~  203 (467)
T PRK07818        187 FAYVLKNYGVDVTIVEF  203 (467)
T ss_pred             HHHHHHHCCCEEEEEEE
T ss_conf             99999832987777621


No 425
>pfam00070 Pyr_redox Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Probab=68.09  E-value=5.7  Score=19.59  Aligned_cols=28  Identities=25%  Similarity=0.373  Sum_probs=23.7

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             7727889999999825883899841566
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAEVILISGPVS  243 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~  243 (405)
                      -.|-.|.++|..+..+|.+||+|.....
T Consensus         6 GgG~ig~E~A~~l~~~G~~Vtiie~~~~   33 (82)
T pfam00070         6 GGGYIGLEFASALAKLGSKVTVVERRDR   33 (82)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             9889999999999863927899812573


No 426
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=67.85  E-value=9.3  Score=18.23  Aligned_cols=34  Identities=29%  Similarity=0.508  Sum_probs=25.9

Q ss_pred             EEEEEEE----CHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             6999952----84789999999999998798899985856
Q gi|254780622|r    7 KIALIMC----GSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus         7 ~Illgvt----Gsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      ||++. |    ||+..| +.+|.+.|.+.|++|+++.+..
T Consensus         2 kI~i~-~~P~~GG~e~~-v~~La~~L~~~GHeV~vit~~~   39 (371)
T cd04962           2 KIGIV-CYPTYGGSGVV-ATELGKALARRGHEVHFITSSR   39 (371)
T ss_pred             EEEEE-CCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECCC
T ss_conf             79998-99999869999-9999999997599999995689


No 427
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=67.74  E-value=9.3  Score=18.22  Aligned_cols=158  Identities=23%  Similarity=0.271  Sum_probs=76.5

Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             885569999528478999999999999879889998585686306989----9999747975820767887787743001
Q gi|254780622|r    3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPL----IVGAISNRRVYTHLLSYKEGYESNHIQL   78 (405)
Q Consensus         3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~----~l~~lt~~~v~~~~~~~~~~~~~~Hi~l   78 (405)
                      |+|||||+-=...    ..-.|++.|...|+++....+=   ++ .|.    .+..+     +.              +|
T Consensus         1 L~G~rVLVTRP~~----qa~~L~~~L~~~G~~~~~~Pli---~I-~p~~~~~~~~~~-----l~--------------~l   53 (255)
T PRK05752          1 MSGWRLLLTRPAE----DCAALAASLAEAGIHSSSLPLL---AI-EPLPLTPEQRAL-----LL--------------EL   53 (255)
T ss_pred             CCCCEEEEECCHH----HHHHHHHHHHHCCCCEEECCCE---EE-EECCCCHHHHHH-----HH--------------CC
T ss_conf             9987899809778----8999999999779978972888---98-428997789999-----86--------------28


Q ss_pred             CCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             14465578841118889885202455214666752279968984056600000388999999986400013465212553
Q gi|254780622|r   79 ANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMA  158 (405)
Q Consensus        79 ~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la  158 (405)
                      .++..++++-|--++.....   +     ...-......+ .++        --|.|.   +.|+++|..+.-|..+.  
T Consensus        54 ~~~d~vifvS~nAv~~~~~~---l-----~~~~~~~~~~~-~~A--------VG~~TA---~aL~~~G~~v~~p~~~~--  111 (255)
T PRK05752         54 DRYCAVIVVSKPAARLGLEL---L-----DEYWPQPPQQP-WFS--------VGAATA---AILQDYGLDVSYPEQGD--  111 (255)
T ss_pred             CCCCEEEEECHHHHHHHHHH---H-----HHHCCCCCCCE-EEE--------ECHHHH---HHHHHCCCCCCCCCCCC--
T ss_conf             88688999877999999999---9-----86288953382-899--------889999---99997699824489877--


Q ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             10322333434558999999986310132001797789840420101021357621577278899999998258838998
Q gi|254780622|r  159 ESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       159 ~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li  238 (405)
                        +-||.-.+|+.           .  ....+.|+||||--|-               .||  -.|++.+..+||.|.++
T Consensus       112 --~SE~LL~lp~l-----------~--~~~~~~g~rVLi~rG~---------------gGR--~~L~~~L~~rGa~V~~~  159 (255)
T PRK05752        112 --DSEALLALPAL-----------R--QALAVPDPRVLIMRGE---------------GGR--ELLAERLREQGASVDYL  159 (255)
T ss_pred             --CHHHHHHCHHH-----------H--HHHCCCCCEEEEEECC---------------CCH--HHHHHHHHHCCCEEEEE
T ss_conf             --76788605545-----------4--2204778879998167---------------617--89999999889989899


Q ss_pred             ECC
Q ss_conf             415
Q gi|254780622|r  239 SGP  241 (405)
Q Consensus       239 ~g~  241 (405)
                      .-.
T Consensus       160 ~~Y  162 (255)
T PRK05752        160 ELY  162 (255)
T ss_pred             EEE
T ss_conf             878


No 428
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=67.67  E-value=8  Score=18.66  Aligned_cols=32  Identities=25%  Similarity=0.218  Sum_probs=25.8

Q ss_pred             EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             999952847899999999999987988999858
Q gi|254780622|r    8 IALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus         8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      +..|=|||+..| +.+|.+.|.+.|++|.|+-.
T Consensus        14 ~g~gd~GG~e~~-v~~La~~La~rGheV~V~t~   45 (405)
T TIGR03449        14 PGTGDAGGMNVY-ILETATELARRGIEVDIFTR   45 (405)
T ss_pred             CCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEEC
T ss_conf             999995886999-99999999978996999935


No 429
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=67.67  E-value=5.7  Score=19.61  Aligned_cols=192  Identities=22%  Similarity=0.232  Sum_probs=90.1

Q ss_pred             CCCCEEE---EEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8855699---99528478999999999999879889998585686306989999-9747975820767887787743001
Q gi|254780622|r    3 LSGKKIA---LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVG-AISNRRVYTHLLSYKEGYESNHIQL   78 (405)
Q Consensus         3 l~~k~Il---lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~-~lt~~~v~~~~~~~~~~~~~~Hi~l   78 (405)
                      +.||+|+   +|+|| +|      .++.|.+.|++|++.=++.+.  -++.... ...+-++....        ... +.
T Consensus         5 ~~~~kv~V~GLG~sG-~a------~a~~L~~~G~~v~v~D~~~~~--~~~~~~~~~~~~i~~~~g~--------~~~-~~   66 (448)
T COG0771           5 FQGKKVLVLGLGKSG-LA------AARFLLKLGAEVTVSDDRPAP--EGLAAQPLLLEGIEVELGS--------HDD-ED   66 (448)
T ss_pred             CCCCEEEEEECCCCC-HH------HHHHHHHCCCEEEEECCCCCC--CCHHHHHHHCCCCEEECCC--------CCH-HC
T ss_conf             059979999266510-99------999999779869998389876--5323444420372231376--------411-00


Q ss_pred             CCCCCEEEEEECC---HHHHHHH-HCCCCCCHHHHHHHHC---CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             1446557884111---8889885-2024552146667522---7996898405660000038899999998640001346
Q gi|254780622|r   79 ANECDLLVVAPAS---ANFIAHV-AHGMVYDLASAILLAK---GDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIG  151 (405)
Q Consensus        79 ~~~aD~~iVaPaT---aNtiaK~-A~GiaD~llt~~~la~---~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~  151 (405)
                      -.++|++|+-|-=   -..+-+. +.|+  -.++-+-|++   ...|++..---|..-   -+|.=--..|+..|.... 
T Consensus        67 ~~~~d~vV~SPGi~~~~p~v~~A~~~gi--~i~~dieL~~r~~~~~p~vaITGTNGKT---TTTsli~~~l~~~G~~~~-  140 (448)
T COG0771          67 LAEFDLVVKSPGIPPTHPLVEAAKAAGI--EIIGDIELFYRLSGEAPIVAITGTNGKT---TTTSLIAHLLKAAGLDAL-  140 (448)
T ss_pred             CCCCCEEEECCCCCCCCHHHHHHHHCCC--CEEEHHHHHHHHCCCCCEEEEECCCCHH---HHHHHHHHHHHHCCCCCE-
T ss_conf             1347789989999998889999998699--3774888898744899989997999628---899999999985599832-


Q ss_pred             CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEE---CC-EEEEECCC-------CCHH
Q ss_conf             5212553103223334345589999999863101320017977898404201010---21-35762157-------7278
Q gi|254780622|r  152 PESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPL---DP-MRYIANRS-------SGQQ  220 (405)
Q Consensus       152 P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~I---D~-VR~ItN~S-------SGk~  220 (405)
                            . ||..|..-+    +.+..       ..+   .+.-||=.|-=+-|..   +| +=.|+|.|       .+..
T Consensus       141 ------l-gGNIG~p~l----~~~~~-------~~~---~d~~VlElSSfQL~~~~~~~P~iavilNi~~DHLD~H~s~e  199 (448)
T COG0771         141 ------L-GGNIGTPAL----ELLEQ-------AEP---ADVYVLELSSFQLETTSSLRPEIAVILNISEDHLDRHGSME  199 (448)
T ss_pred             ------E-CCCCCCCHH----HHHCC-------CCC---CCEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCHH
T ss_conf             ------1-351671378----76201-------578---98799992455516576678557999448877865606999


Q ss_pred             HHHHHHHHHHCCCC-EEEEE
Q ss_conf             89999999825883-89984
Q gi|254780622|r  221 GHAIAKSLAYFGAE-VILIS  239 (405)
Q Consensus       221 G~~iA~~~~~~Ga~-V~li~  239 (405)
                      -|.-|+.=...+.. +-++.
T Consensus       200 ~Y~~aK~~i~~~~~~~~Vin  219 (448)
T COG0771         200 NYAAAKLRILEGQTEVAVIN  219 (448)
T ss_pred             HHHHHHHHHHCCCCCEEEEE
T ss_conf             99999999983896279983


No 430
>PRK00081 coaE dephospho-CoA kinase; Reviewed
Probab=67.58  E-value=4.7  Score=20.14  Aligned_cols=28  Identities=25%  Similarity=0.315  Sum_probs=20.2

Q ss_pred             EEEEEECHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             99995284789999999999998798899
Q gi|254780622|r    8 IALIMCGSVAVYKSLDLIRRLRERGAVVI   36 (405)
Q Consensus         8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~   36 (405)
                      +++||||+|++-|+. +++.|++.|+.|.
T Consensus         3 ~~IgiTG~igsGKSt-v~~~l~~~G~~vi   30 (199)
T PRK00081          3 LIIGLTGGIGSGKST-VANIFAELGVPVI   30 (199)
T ss_pred             EEEEEECCCCCCHHH-HHHHHHHCCCCEE
T ss_conf             899957888777999-9999998899399


No 431
>CHL00099 ilvB acetohydroxyacid synthase large subunit
Probab=67.58  E-value=9.4  Score=18.20  Aligned_cols=162  Identities=16%  Similarity=0.213  Sum_probs=92.3

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-------EECCEEEEECCCCCHHHHHHHH----HHHHCCCCE
Q ss_conf             43455899999998631013200179778984042010-------1021357621577278899999----998258838
Q gi|254780622|r  167 RMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-------PLDPMRYIANRSSGQQGHAIAK----SLAYFGAEV  235 (405)
Q Consensus       167 rl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-------~ID~VR~ItN~SSGk~G~~iA~----~~~~~Ga~V  235 (405)
                      ....|.+++..+..+.         ...++++-+|+..       ...|-+++++.+.|-||+.+.-    .+...+-.|
T Consensus       377 ~~l~p~~~~~~l~~l~---------~d~iiv~D~G~~~~~~~~~~~~~p~~~~~~~~~GsmG~glPaAiGA~lA~p~r~V  447 (588)
T CHL00099        377 TSLSPQEVINEISQLA---------QNAYFTTDVGQHQMWAAQFLKVGPRKWISSAGLGTMGYGLPAAIGAQVAHPNEQV  447 (588)
T ss_pred             CCCCHHHHHHHHHHHC---------CCCEEEECCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf             8729999999998638---------9858995786036789875315899476368875523318999999985899818


Q ss_pred             EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH-HHCCCC-CCCCCCCCEEEEEECHHHH
Q ss_conf             99841566776567467546577899999985058887997404444432222-101123-3455775104552180689
Q gi|254780622|r  236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKI-AGTKIK-RKDIGDTMRIDLMENPDIL  313 (405)
Q Consensus       236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~-~~~Kik-k~s~~~~l~L~L~~~pdIL  313 (405)
                      .++.|-.+.          --|.+|+..++...++.=++|+.=.  -|-..+. .+.... +....   .+. .+.||..
T Consensus       448 v~i~GDGsf----------~mt~qEL~Tavr~~lpv~ivV~NN~--~yg~ir~~q~~~~~~~~~~~---~~~-~~~pDf~  511 (588)
T CHL00099        448 ICISGDASF----------QMNLQELGTIAQYKLPIKIIIINNK--WQGMVRQWQQAFYGERYSHS---NME-EGAPDFV  511 (588)
T ss_pred             EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECC--CCHHHHHHHHHHCCCCCCCC---CCC-CCCCCHH
T ss_conf             999754586----------3219999999996899589999798--33699999998628876744---576-8998999


Q ss_pred             HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             887621489958999811412389999999997499899992057
Q gi|254780622|r  314 KIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCIL  358 (405)
Q Consensus       314 ~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i~  358 (405)
                      + +.+--.    +-||..++.+-++.|.++..+.+-=.+|-=.|+
T Consensus       512 ~-lA~a~G----~~g~rV~~~~el~~Al~~Al~~~gP~lIeV~vd  551 (588)
T CHL00099        512 K-LAEAFG----IKGITIKSRKDLKSKLQRALDYDGPVLVDCQVR  551 (588)
T ss_pred             H-HHHHCC----CEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEC
T ss_conf             9-999779----989997999999999999982999789999978


No 432
>pfam00701 DHDPS Dihydrodipicolinate synthetase family. This family has a TIM barrel structure.
Probab=67.26  E-value=9.5  Score=18.16  Aligned_cols=179  Identities=17%  Similarity=0.163  Sum_probs=98.4

Q ss_pred             CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf             68984056600000388999999986400013465212553103223334345589999999863101320017977898
Q gi|254780622|r  118 PVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALV  197 (405)
Q Consensus       118 pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlI  197 (405)
                      |.++-|.-...-.+....+++++.|.+.|+.=+-+       ||-.|.+-....++-..-+.......     +| ++-|
T Consensus         7 ~a~~TPF~~dg~iD~~~~~~~i~~l~~~Gv~gi~v-------~GstGE~~~Ls~~Er~~v~~~~~~~~-----~~-~~pv   73 (289)
T pfam00701         7 TALVTPFDTDGRLDEEALRKLIEFLINKGADGLFV-------GGTTGESFTLSTEEHEQLIEITVDEA-----KG-RIPV   73 (289)
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CEECCCCCCCCHHHHHHHHHHHHHHC-----CC-CCEE
T ss_conf             52667789685969999999999999779999997-------83640311388999999999999981-----99-8628


Q ss_pred             EECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             40420101021357621577278899999998258838998415667765674675465778999999850588879974
Q gi|254780622|r  198 TSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMV  277 (405)
Q Consensus       198 TaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~a  277 (405)
                      .+|-+..            |=+.-.++|+.+...|++-.++.-|...      . ..-+...++++++.+..+..+++. 
T Consensus        74 i~gv~~~------------st~~~i~~a~~A~~~Gad~i~v~pP~y~------~-~~~~~i~~~~~~va~a~~lPi~iY-  133 (289)
T pfam00701        74 IAGTGSN------------STREAIHLAQLAEAAGADGVLAVTPYYN------K-PSQEGLYQHFKAIAAATDLPVILY-  133 (289)
T ss_pred             EECCCCC------------CHHHHHHHHHHHHHCCCCEEEECCCCCC------C-CCHHHHHHHHHHHHHCCCCCEEEE-
T ss_conf             6378887------------8999999999999749997887799888------9-999999999999983159977997-


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             044444322221011233455775104552180689887621489958999811412389999999997499899992
Q gi|254780622|r  278 SAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSN  355 (405)
Q Consensus       278 AAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN  355 (405)
                            -.+..        ++     .  .-+|+.+..|.+  .|  -++|+|-.+.++.... +-+...+-++.|.+
T Consensus       134 ------n~P~~--------tg-----~--~l~~~~l~~L~~--~~--~i~giK~ss~~~~~~~-~~~~~~~~~~~v~~  185 (289)
T pfam00701       134 ------NVPSR--------TG-----Q--DLTPETIERLAE--CP--NVVGVKDAVGDLERME-NIRKRAGPDFTILS  185 (289)
T ss_pred             ------ECCCC--------CC-----C--CCCHHHHHHHHC--CC--CEEEEEECCCCHHHHH-HHHHHCCCCCEEEC
T ss_conf             ------15654--------03-----3--679999999826--89--9899996998999999-99996699824506


No 433
>KOG1221 consensus
Probab=66.97  E-value=9.7  Score=18.12  Aligned_cols=102  Identities=14%  Similarity=0.204  Sum_probs=45.7

Q ss_pred             CCCCEEE-EEEECHHHHHHHHHHHHHHHHCCC---EEEEEECH----HHHHHCCH----HHHHHHHCC---------CCC
Q ss_conf             8855699-995284789999999999998798---89998585----68630698----999997479---------758
Q gi|254780622|r    3 LSGKKIA-LIMCGSVAVYKSLDLIRRLRERGA---VVIPVMTK----SAQKFITP----LIVGAISNR---------RVY   61 (405)
Q Consensus         3 l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~---~V~vv~T~----~A~~fi~~----~~l~~lt~~---------~v~   61 (405)
                      ++||.|+ -|-||-.+-+    ++..|-|.-.   .++..+-.    ++++.+..    ..|+.+...         +|.
T Consensus        10 ~~~k~i~vTG~tGFlgKV----liEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~   85 (467)
T KOG1221          10 YKNKTIFVTGATGFLGKV----LIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA   85 (467)
T ss_pred             HCCCEEEEECCCCHHHHH----HHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCEECC
T ss_conf             579859997276345789----9999985076765699998347898778999998744699999863952102000012


Q ss_pred             CCCCCCCCCCCCCCC-CCCCCCCEEEEEECCHHHHHHHHCCCCCCHHH
Q ss_conf             207678877877430-01144655788411188898852024552146
Q gi|254780622|r   62 THLLSYKEGYESNHI-QLANECDLLVVAPASANFIAHVAHGMVYDLAS  108 (405)
Q Consensus        62 ~~~~~~~~~~~~~Hi-~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt  108 (405)
                      -|....+-+-+.... .+.+.-|+++=.-||-++-.++-.++.=|...
T Consensus        86 GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~G  133 (467)
T KOG1221          86 GDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRG  133 (467)
T ss_pred             CCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHH
T ss_conf             566686668882778888745778999530422553665654222274


No 434
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=66.48  E-value=9.9  Score=18.06  Aligned_cols=36  Identities=22%  Similarity=0.373  Sum_probs=21.8

Q ss_pred             CCCEEEE--EECCCCHHH----HHHHHHHHHCCCCEEEEECC
Q ss_conf             9958999--811412389----99999999749989999205
Q gi|254780622|r  322 RPSIVVG--FAAETQCIE----QNAREKLLNKGADFIVSNCI  357 (405)
Q Consensus       322 ~~~~lVG--FkaET~~l~----~~A~~Kl~~K~~D~IVAN~i  357 (405)
                      +...+.|  ||..|+|+-    -...+.|.++|++..+.-+.
T Consensus       314 ~~I~ilGlafK~~tdD~R~Sps~~ii~~L~~~g~~V~~~DP~  355 (411)
T TIGR03026       314 KTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPL  355 (411)
T ss_pred             CEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCC
T ss_conf             613787411069998534582999999999788989999998


No 435
>PRK00654 glgA glycogen synthase; Provisional
Probab=66.44  E-value=9.4  Score=18.20  Aligned_cols=27  Identities=19%  Similarity=0.148  Sum_probs=22.9

Q ss_pred             ECHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             2847899999999999987988999858
Q gi|254780622|r   13 CGSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus        13 tGsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      +|+.+-+ +-.|.+.|.+.|++|+||+-
T Consensus        16 vGGLgdv-v~~L~~aL~~~G~~V~Vi~P   42 (476)
T PRK00654         16 TGGLGDV-VGALPKALAKLGHDVRVLLP   42 (476)
T ss_pred             CCCHHHH-HHHHHHHHHHCCCEEEEEEC
T ss_conf             5749999-99999999976995999947


No 436
>pfam01266 DAO FAD dependent oxidoreductase. This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Probab=66.12  E-value=7  Score=19.04  Aligned_cols=53  Identities=19%  Similarity=0.254  Sum_probs=27.3

Q ss_pred             CHHHHHHHHHHHHCCCCEEEEECCC-CCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHH
Q ss_conf             2788999999982588389984156-67765674675465778999999850588879974044
Q gi|254780622|r  218 GQQGHAIAKSLAYFGAEVILISGPV-SIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAV  280 (405)
Q Consensus       218 Gk~G~~iA~~~~~~Ga~V~li~g~~-~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAV  280 (405)
                      .+.-.++++++..+|+++..=+ ++ ++....+ . +.|.|.+.       ...+|.+|.|+-.
T Consensus       147 ~~~~~~l~~~~~~~G~~i~~~~-~V~~i~~~~~-~-~~v~t~~g-------~i~a~~VV~a~G~  200 (309)
T pfam01266       147 ARLLRALARAAEALGVEILEGT-EVTGLEREGG-G-VTVETADG-------EIRADKVVNAAGA  200 (309)
T ss_pred             HHHHHHHHHHHHHCCCEEECCC-EEEEEEEECC-E-EEEEECCC-------EECCCEEEECCCH
T ss_conf             2436799999987796999176-8999999899-9-99998997-------0858999997774


No 437
>PRK10307 predicted glycosyl transferase; Provisional
Probab=66.02  E-value=10  Score=18.00  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=24.7

Q ss_pred             EEEEEEE------CHHHHHHHHHHHHHHHHCCCEEEEEEC
Q ss_conf             6999952------847899999999999987988999858
Q gi|254780622|r    7 KIALIMC------GSVAVYKSLDLIRRLRERGAVVIPVMT   40 (405)
Q Consensus         7 ~Illgvt------Gsiaa~k~~~l~~~L~~~g~~V~vv~T   40 (405)
                      ||++...      |+++-| +-+|++.|.+.|++|+|+.+
T Consensus         2 rIl~vs~~y~P~~~G~~~~-~~~La~~L~~~GheV~Vit~   40 (415)
T PRK10307          2 KILVYGINYAPELTGIGKY-TGEMAEWLAARGHEVRVITA   40 (415)
T ss_pred             EEEEECCCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEEC
T ss_conf             8999858489978879999-99999999978998999977


No 438
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=65.78  E-value=6.9  Score=19.05  Aligned_cols=68  Identities=12%  Similarity=0.047  Sum_probs=34.1

Q ss_pred             CCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH
Q ss_conf             42010102135762157727889999999825883899841566776567467546577899999985058887997404
Q gi|254780622|r  200 GPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA  279 (405)
Q Consensus       200 G~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA  279 (405)
                      |+.+.|-|-+-   |  ..+.-.++++++..+|+.+..=+.-..+. ..+-.+..|.|..+       ...+|.+|.||-
T Consensus       188 Ga~~~p~d~~~---d--~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~-~~~~~v~~V~t~~g-------~i~ad~vV~AaG  254 (416)
T PRK00711        188 GGLRLPNDETG---D--CQLFTQRLAALAEQLGVKFRFNTPVDGLL-VEGGRITGVQTGGG-------VITADAYVVALG  254 (416)
T ss_pred             EEEEECCCCEE---C--HHHHHHHHHHHHHHCCCCCCCCCCEEEEE-EECCEEEEEECCCC-------EEEEEEEEEECC
T ss_conf             99996898706---6--79999999999985388620023158999-84998998853895-------575016999337


Q ss_pred             H
Q ss_conf             4
Q gi|254780622|r  280 V  280 (405)
Q Consensus       280 V  280 (405)
                      .
T Consensus       255 a  255 (416)
T PRK00711        255 S  255 (416)
T ss_pred             H
T ss_conf             4


No 439
>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11; InterPro: IPR014155   This entry contains VirB11, a protein that is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer . VirB11 is believed to be an ATPase  and is a homologue of the P-like conjugation system TrbB protein and the Flp pilus system protein TadA ..
Probab=65.68  E-value=1.7  Score=22.95  Aligned_cols=145  Identities=16%  Similarity=0.211  Sum_probs=69.4

Q ss_pred             CCCC--CHHHHHHHH-CCCCCEEEECCCCCH-H----HHHH-HHHHHHHHHHHHCCC-----CCCCCHHHHHHCCCCCCC
Q ss_conf             2455--214666752-279968984056600-0----0038-899999998640001-----346521255310322333
Q gi|254780622|r  101 GMVY--DLASAILLA-KGDQPVLIAPAMNFM-M----WAKP-ATQRNVEILQKDGCY-----FIGPESGAMAESNGYGVG  166 (405)
Q Consensus       101 GiaD--~llt~~~la-~~~~pi~iaPaMn~~-M----~~~p-~~~~nl~~L~~~g~~-----vi~P~~g~la~c~~~G~g  166 (405)
                      .|++  +|+.+..|. +.+..+|+.||.... -    ..-| .++..++.+++.|.+     |.-|+.+.+.        
T Consensus        61 ~is~y~~P~LSa~LP~G~RvQ~V~PPAc~~~eTvs~tIRKpS~~~~sL~dy~~~G~F~~ar~~~~~~~~~~~--------  132 (328)
T TIGR02788        61 SISEYENPILSATLPGGERVQIVIPPACENDETVSITIRKPSLVDLSLDDYEEKGFFDTARAVVVPASTELS--------  132 (328)
T ss_pred             CCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCC--------
T ss_conf             201022863788869994799980687589885899995264445547999627985447776314434434--------


Q ss_pred             CCCCHHHHHHHHHHHHHCC--CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHH-HHCCCCEEEEEC--C
Q ss_conf             4345589999999863101--3200179778984042010102135762157727889999999-825883899841--5
Q gi|254780622|r  167 RMSEPCDIIRQITWLLYKS--KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSL-AYFGAEVILISG--P  241 (405)
Q Consensus       167 rl~e~~~I~~~~~~~~~~~--~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~-~~~Ga~V~li~g--~  241 (405)
                        +.-+++.+....--.+.  +..-..+|+|+|.+| |             |||||=+.=|--= .=.--.+..|--  -
T Consensus       133 --d~~~~L~el~~~g~~~~Fl~~Ai~~~knIii~GG-T-------------gSGKTTf~kal~~~IP~~ER~iTIED~~E  196 (328)
T TIGR02788       133 --DKDEELLELLDAGDIKEFLRLAIASRKNIIISGG-T-------------GSGKTTFLKALVKEIPKDERLITIEDTRE  196 (328)
T ss_pred             --HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEC-C-------------CCHHHHHHHHHHHCCCCCCCEEEEEEEEC
T ss_conf             --6899999998628887999999873891999906-8-------------97189999999732762252788852011


Q ss_pred             CCCCC-CCCEEEE---------EHHHHHHHHHHHHHCC
Q ss_conf             66776-5674675---------4657789999998505
Q gi|254780622|r  242 VSIAD-PPNVMTI---------HVERAEDMLQEVLKAL  269 (405)
Q Consensus       242 ~~~~~-~~~~~~i---------~v~t~~em~~~~~~~~  269 (405)
                      ..++- |..++..         .-.|+++++++|++..
T Consensus       197 ~~~~hhpN~V~L~ysk~v~~g~~~vt~~~Ll~scLRMr  234 (328)
T TIGR02788       197 LFLPHHPNKVHLFYSKGVGQGSAKVTPKDLLESCLRMR  234 (328)
T ss_pred             CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf             47888986456553464234435689899999971177


No 440
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=65.30  E-value=10  Score=17.92  Aligned_cols=69  Identities=25%  Similarity=0.303  Sum_probs=40.5

Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88556999952847899999999999987988999858568630698999997479--7582076788778774300114
Q gi|254780622|r    3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNR--RVYTHLLSYKEGYESNHIQLAN   80 (405)
Q Consensus         3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~--~v~~~~~~~~~~~~~~Hi~l~~   80 (405)
                      |+||+|++.=|||=--    .-.--|+..|.+|.+-+-+++-. -...++..++.+  +|.+            --++..
T Consensus        35 LKgKkI~IiG~GsQG~----aqaLNlRDSGldV~~~LR~~si~-~k~~Sw~~A~~~Gf~V~t------------~eeai~   97 (489)
T PRK05225         35 LKGKKIVIVGCGAQGL----NQGLNMRDSGLDISYALRKEAIA-EKRASWRKATENGFKVGT------------YEELIP   97 (489)
T ss_pred             HCCCEEEEECCCHHHH----HHHCCCCCCCCCEEEEECCCHHH-HHHHHHHHHHHCCCCCCC------------HHHHHH
T ss_conf             5288599980365877----76524410588569995553033-416679999977996467------------899732


Q ss_pred             CCCEEEEE
Q ss_conf             46557884
Q gi|254780622|r   81 ECDLLVVA   88 (405)
Q Consensus        81 ~aD~~iVa   88 (405)
                      +||++++.
T Consensus        98 ~ADvV~~L  105 (489)
T PRK05225         98 QADLVVNL  105 (489)
T ss_pred             CCCEEEEE
T ss_conf             35878870


No 441
>PTZ00052 thioredoxin reductase; Provisional
Probab=65.22  E-value=4.7  Score=20.11  Aligned_cols=76  Identities=17%  Similarity=0.201  Sum_probs=47.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH-HE--ECC--EEEEECCC---------------CCHHHH
Q ss_conf             23334345589999999863101320017977898404201-01--021--35762157---------------727889
Q gi|254780622|r  163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY-EP--LDP--MRYIANRS---------------SGQQGH  222 (405)
Q Consensus       163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~-E~--ID~--VR~ItN~S---------------SGk~G~  222 (405)
                      .|.|++-++..+--.+..-  ......+..++++|-.|..- .|  |+.  -+.+||..               .|-.|.
T Consensus       158 ~G~a~f~~~~tV~v~~~~~--~g~~~~i~a~~iIIATGS~P~iP~~ipg~~~~~ltS~~~l~l~~lP~~lvIIGgG~IG~  235 (541)
T PTZ00052        158 NGLAKLKDPHTVEYYLKGD--NSQEETITSKYILIATGCRPHIPEDVEGAIELSITSDDIFSLKKSPGKTLVVGASYVAL  235 (541)
T ss_pred             EEEEEEECCCEEEEEECCC--CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCHHHH
T ss_conf             8589983698789984258--88527999527998578887678887767630206532206534896289989869999


Q ss_pred             HHHHHHHHCCCCEEEEEC
Q ss_conf             999999825883899841
Q gi|254780622|r  223 AIAKSLAYFGAEVILISG  240 (405)
Q Consensus       223 ~iA~~~~~~Ga~V~li~g  240 (405)
                      ++|..+...|.+||++..
T Consensus       236 E~A~if~~lGs~VTi~~r  253 (541)
T PTZ00052        236 ECAGFLNSLGFDVTVAVR  253 (541)
T ss_pred             HHHHHHHHCCCEEEEEEC
T ss_conf             999999975985899953


No 442
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=65.18  E-value=9.5  Score=18.16  Aligned_cols=26  Identities=35%  Similarity=0.397  Sum_probs=22.0

Q ss_pred             ECHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             284789999999999998798899985
Q gi|254780622|r   13 CGSVAVYKSLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus        13 tGsiaa~k~~~l~~~L~~~g~~V~vv~   39 (405)
                      +||+..| +.+|++.|.+.|++|.|+.
T Consensus        20 ~GG~e~~-v~~La~~L~~~GH~V~V~t   45 (398)
T cd03800          20 TGGQNVY-VLELARALARLGHEVDIFT   45 (398)
T ss_pred             CCCHHHH-HHHHHHHHHHCCCEEEEEE
T ss_conf             6887999-9999999998699699997


No 443
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=64.89  E-value=9.1  Score=18.30  Aligned_cols=37  Identities=24%  Similarity=0.179  Sum_probs=31.8

Q ss_pred             HEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             0102135762157727889999999825883899841
Q gi|254780622|r  204 EPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       204 E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      .+--+|+.+.=--.|.||.-||..+...|.+|+|+--
T Consensus       308 ~~~~~i~~v~ViGaG~MG~GIA~~~a~aG~~V~l~D~  344 (715)
T PRK11730        308 KDAKDVKQAAVLGAGIMGGGIAYQSASKGVPVIMKDI  344 (715)
T ss_pred             CCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEC
T ss_conf             6677762799978771079999999957995799978


No 444
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=64.74  E-value=11  Score=17.85  Aligned_cols=28  Identities=29%  Similarity=0.246  Sum_probs=22.7

Q ss_pred             CHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             84789999999999998798899985856
Q gi|254780622|r   14 GSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus        14 Gsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      ||++.+ +.+|++.|.++|++|.|+.+..
T Consensus        14 GG~~~~-~~~La~~L~~~GheV~Vit~~~   41 (374)
T cd03817          14 NGVATS-IRRLAEELEKRGHEVYVVAPSY   41 (374)
T ss_pred             CCHHHH-HHHHHHHHHHCCCEEEEEECCC
T ss_conf             809999-9999999997799899997279


No 445
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells.  These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=64.72  E-value=11  Score=17.85  Aligned_cols=29  Identities=14%  Similarity=0.218  Sum_probs=16.7

Q ss_pred             EEEEEEECHHHHHHHHHHHHHHHH-CCCEE
Q ss_conf             699995284789999999999998-79889
Q gi|254780622|r    7 KIALIMCGSVAVYKSLDLIRRLRE-RGAVV   35 (405)
Q Consensus         7 ~IllgvtGsiaa~k~~~l~~~L~~-~g~~V   35 (405)
                      |||+.+.||-.+.++.+++..+.+ .++++
T Consensus         1 rILVpvd~s~~s~~al~~A~~la~~~~a~l   30 (132)
T cd01988           1 RILVPVANPNTARDLLELAAALARAQNGEI   30 (132)
T ss_pred             CEEEECCCCHHHHHHHHHHHHHHHHCCCEE
T ss_conf             989972898899999999999998769989


No 446
>PRK11761 cysM cysteine synthase B; Provisional
Probab=64.56  E-value=6.8  Score=19.09  Aligned_cols=50  Identities=22%  Similarity=0.190  Sum_probs=26.6

Q ss_pred             EEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             5788411188898852024552146667522799689840566000003889999999864000134
Q gi|254780622|r   84 LLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFI  150 (405)
Q Consensus        84 ~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi  150 (405)
                      -.||.+.|.||=.-+|         ..+....-+-+++.|.   +     +.++.++.++.+|..|+
T Consensus        64 ~~vveaSSGN~g~alA---------~~a~~~G~~~~iv~p~---~-----~s~~k~~~l~~~GAeVi  113 (296)
T PRK11761         64 DTLIEATSGNTGIALA---------MAAAIKGYRMKLIMPE---N-----MSQERRAAMRAYGAELI  113 (296)
T ss_pred             CEEEEECCCCHHHHHH---------HHHHHCCCEEEEECCC---C-----CCHHHHHHHHHCCCCEE
T ss_conf             8799937886799999---------9999819747996786---5-----78899999997499557


No 447
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit; InterPro: IPR014215   This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by IPR014214 from INTERPRO. This protein is also known as SpoVFA..
Probab=64.52  E-value=5.6  Score=19.66  Aligned_cols=102  Identities=17%  Similarity=0.299  Sum_probs=52.9

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEE--EEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCC
Q ss_conf             72788999999982588389984156677656746--7546577899999985058887997404444432222101123
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVM--TIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIK  294 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~--~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kik  294 (405)
                      =||+|.+||+.|...||+|..=+-...  ....+-  .++--...+|.+++.   ++|++|           ++-     
T Consensus       160 fGRtG~tiAr~f~aLGA~V~V~AR~~~--dlARI~E~g~~P~~~~~L~~~v~---e~DIvi-----------NTi-----  218 (288)
T TIGR02853       160 FGRTGMTIARTFSALGARVSVGARSSA--DLARITEMGLEPVPLNKLEEKVA---EIDIVI-----------NTI-----  218 (288)
T ss_pred             CCCHHHHHHHHHHHCCCEEEEECCCHH--HHHHHHHHCCCCCCHHHHHHHHC---CCCEEE-----------ECC-----
T ss_conf             470568999999726980575317836--78999996068827167887650---002477-----------067-----


Q ss_pred             CCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCC-CHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             345577510455218068988762148995899981141-23899999999974998999920
Q gi|254780622|r  295 RKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAET-QCIEQNAREKLLNKGADFIVSNC  356 (405)
Q Consensus       295 k~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET-~~l~~~A~~Kl~~K~~D~IVAN~  356 (405)
                               -.|+-+.|+|+++    .++.++|=.+-.- +..-++|++    .|..++.|=-
T Consensus       219 ---------PaLvlt~~~l~~l----p~~AviiDLAS~PGGtDF~yAk~----~Gi~A~LAPG  264 (288)
T TIGR02853       219 ---------PALVLTKDVLSKL----PKHAVIIDLASKPGGTDFEYAKK----RGIKALLAPG  264 (288)
T ss_pred             ---------CCCCCCHHHHHHC----CCCCEEEEECCCCCCCCHHHHHH----CCCEEEECCC
T ss_conf             ---------6300365899526----85848997327848737698986----2982897187


No 448
>PRK05439 pantothenate kinase; Provisional
Probab=64.52  E-value=7.1  Score=18.99  Aligned_cols=26  Identities=19%  Similarity=0.213  Sum_probs=10.8

Q ss_pred             CCCCHHHHH-HHHHHHHC---CCCEEEEEC
Q ss_conf             577278899-99999825---883899841
Q gi|254780622|r  215 RSSGQQGHA-IAKSLAYF---GAEVILISG  240 (405)
Q Consensus       215 ~SSGk~G~~-iA~~~~~~---Ga~V~li~g  240 (405)
                      -+.||--.| +-++++.|   .-.|.||+.
T Consensus        95 VAVGKSTtARlLq~LL~r~~~~~~V~LvTT  124 (312)
T PRK05439         95 VAVGKSTTARLLQALLSRWPEHPKVDLVTT  124 (312)
T ss_pred             EECCHHHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf             102628899999999950789994589934


No 449
>PRK01184 hypothetical protein; Provisional
Probab=64.46  E-value=6  Score=19.44  Aligned_cols=27  Identities=26%  Similarity=0.350  Sum_probs=18.9

Q ss_pred             EEEEECHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             9995284789999999999998798899
Q gi|254780622|r    9 ALIMCGSVAVYKSLDLIRRLRERGAVVI   36 (405)
Q Consensus         9 llgvtGsiaa~k~~~l~~~L~~~g~~V~   36 (405)
                      ++|+||+|++=|+ .++..|+++|+.|.
T Consensus         3 iIGlTG~iGSGKs-tva~i~~e~G~~vi   29 (183)
T PRK01184          3 IIIVTGMPGSGKG-EFSKIARELGIPVV   29 (183)
T ss_pred             EEEEECCCCCCHH-HHHHHHHHCCCEEE
T ss_conf             9999689988789-99999997799399


No 450
>PTZ00300 pyruvate kinase; Provisional
Probab=64.32  E-value=11  Score=17.80  Aligned_cols=71  Identities=13%  Similarity=0.024  Sum_probs=40.2

Q ss_pred             CCEEEEEECHHHHHHHHHCCCCCCEEE-----EEECCCCHHHHHHHHHHHHCC----CCEEEEECCCCCCCCCCCCCEEE
Q ss_conf             510455218068988762148995899-----981141238999999999749----98999920577677777661189
Q gi|254780622|r  301 TMRIDLMENPDILKIIGHHQCRPSIVV-----GFAAETQCIEQNAREKLLNKG----ADFIVSNCILPDTGFVGKEWNKV  371 (405)
Q Consensus       301 ~l~L~L~~~pdIL~~i~~~k~~~~~lV-----GFkaET~~l~~~A~~Kl~~K~----~D~IVAN~i~~~~~~fgsd~n~v  371 (405)
                      ..-+-+.+++++...+.-.|.=..++.     ++.-.+++.++.|.+.++++|    =|.||.=.-....   ...+|.+
T Consensus       372 ~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~i~~a~~~~~~~g~~~~GD~vVvv~g~~~~---~G~TN~~  448 (454)
T PTZ00300        372 CPIVCVTTRLQTCRQLNITQGVESVFFDAERLGHDEGKEQRVAMGVGFAKSKGYVQSGDLMVVVHADHKV---KGYANQT  448 (454)
T ss_pred             CCEEEECCCHHHHHHHHEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC---CCCCCEE
T ss_conf             9999989879999865660585999866634676569999999999999977998899989999348999---9767479


Q ss_pred             EEE
Q ss_conf             998
Q gi|254780622|r  372 SIV  374 (405)
Q Consensus       372 ~li  374 (405)
                      .++
T Consensus       449 ri~  451 (454)
T PTZ00300        449 RII  451 (454)
T ss_pred             EEE
T ss_conf             999


No 451
>TIGR01426 MGT glycosyltransferase, MGT family; InterPro: IPR006326   These sequences belong to the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. ; GO: 0016758 transferase activity transferring hexosyl groups, 0016999 antibiotic metabolic process.
Probab=64.21  E-value=5  Score=19.98  Aligned_cols=23  Identities=26%  Similarity=0.329  Sum_probs=19.4

Q ss_pred             HHHHHHHHHHCCCEEEEEECHHH
Q ss_conf             99999999987988999858568
Q gi|254780622|r   21 SLDLIRRLRERGAVVIPVMTKSA   43 (405)
Q Consensus        21 ~~~l~~~L~~~g~~V~vv~T~~A   43 (405)
                      ++.++++|.+.|+.|+-..|+.=
T Consensus        12 tL~v~~ELV~RGh~VTY~~t~ef   34 (429)
T TIGR01426        12 TLGVVEELVARGHRVTYATTEEF   34 (429)
T ss_pred             CHHHHHHHHHCCCEEEEECCHHH
T ss_conf             57899999845974663178889


No 452
>PRK06975 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed
Probab=64.14  E-value=11  Score=17.78  Aligned_cols=35  Identities=40%  Similarity=0.580  Sum_probs=20.5

Q ss_pred             CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             0179778984042010102135762157727889999999825883899841
Q gi|254780622|r  189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      .+.||||||--|-               -||  -.||+.+..|||+|.++.-
T Consensus       136 ~v~gkrVLIvRG~---------------GGR--ElLaetL~~RGA~V~y~e~  170 (653)
T PRK06975        136 ALAGKRVLIVRGD---------------GGR--EWLAERLREAGAEVELVEA  170 (653)
T ss_pred             HCCCCEEEEEECC---------------CCH--HHHHHHHHHCCCEEEEEEE
T ss_conf             5349979998278---------------537--9999999987980569978


No 453
>PRK06354 pyruvate kinase; Provisional
Probab=64.07  E-value=11  Score=17.77  Aligned_cols=18  Identities=33%  Similarity=0.344  Sum_probs=9.0

Q ss_pred             CCCEEEECCCCCHHHHHH
Q ss_conf             996898405660000038
Q gi|254780622|r  116 DQPVLIAPAMNFMMWAKP  133 (405)
Q Consensus       116 ~~pi~iaPaMn~~M~~~p  133 (405)
                      ++|+++|--|=..|-+||
T Consensus       276 gKPVI~ATQMLeSMi~np  293 (589)
T PRK06354        276 GIPVITATQMLDSMQRNP  293 (589)
T ss_pred             CCCEEEEECCHHHHCCCC
T ss_conf             997899815578753799


No 454
>cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (formi
Probab=63.90  E-value=11  Score=17.75  Aligned_cols=37  Identities=35%  Similarity=0.531  Sum_probs=26.8

Q ss_pred             CCEEEEEECCC-HHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             97789840420-10102135762157727889999999825883899841566
Q gi|254780622|r  192 GKRALVTSGPT-YEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS  243 (405)
Q Consensus       192 gk~vlITaG~T-~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~  243 (405)
                      ++++|+-+||. .-|+               +.+|+++..+|.+|+++.|.-+
T Consensus        97 ~~~~llVaGG~GiaPl---------------~~l~~~l~~~g~~v~~i~g~r~  134 (243)
T cd06192          97 GGTVLLVAGGIGLAPL---------------LPIAKKLAANGNKVTVLAGAKK  134 (243)
T ss_pred             CCEEEEEECCCCHHHH---------------HHHHHHHHHCCCCEEEEEEECC
T ss_conf             9769999567341659---------------9999999877996699999388


No 455
>PRK00805 putative deoxyhypusine synthase; Provisional
Probab=63.73  E-value=11  Score=17.73  Aligned_cols=54  Identities=19%  Similarity=0.161  Sum_probs=39.8

Q ss_pred             CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCC
Q ss_conf             8556999952847899999999999987988999858568630698999997479758
Q gi|254780622|r    4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVY   61 (405)
Q Consensus         4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~   61 (405)
                      ++.+|.|+.+|.+..-..-.+++.|.|+|. |.+|.|..|.  +..+.++.+ +++-|
T Consensus        52 ~~~tifLtlagam~saGlr~~i~~lIr~~~-Vd~IvtTgan--leeDi~~~~-g~~~y  105 (338)
T PRK00805         52 EDVTIFMGLSGAMVPAGMRRIISYLIEERY-IDVLVSTGAN--IFHDICEAM-GFKHY  105 (338)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHHCCC-EEEEECCCCC--CHHHHHHHC-CCCEE
T ss_conf             897599963110016888999999998697-4599807875--127799870-85403


No 456
>pfam01175 Urocanase Urocanase.
Probab=63.47  E-value=8.9  Score=18.36  Aligned_cols=136  Identities=23%  Similarity=0.239  Sum_probs=73.3

Q ss_pred             HHHCCCCCEEEECC---------CCCHHHHHHHHHHHHHHHHHHCCC-----------CCCCCHHHHHHCCCCCCCCCCC
Q ss_conf             75227996898405---------660000038899999998640001-----------3465212553103223334345
Q gi|254780622|r  111 LLAKGDQPVLIAPA---------MNFMMWAKPATQRNVEILQKDGCY-----------FIGPESGAMAESNGYGVGRMSE  170 (405)
Q Consensus       111 ~la~~~~pi~iaPa---------Mn~~M~~~p~~~~nl~~L~~~g~~-----------vi~P~~g~la~c~~~G~grl~e  170 (405)
                      ++..+++|+=++|+         -|.+|--|=++.++++.|...|+.           .|+|+- .+     .|.     
T Consensus        70 L~vqSG~Pvg~f~th~~APRVliaN~~lVp~wa~~~~f~~l~~~Gl~mYGQMTAGSw~YIG~QG-Iv-----qGT-----  138 (545)
T pfam01175        70 LLVQSGKPVGVFRTHPDAPRVLIANSNLVPKWANWEHFNELEAKGLTMYGQMTAGSWIYIGTQG-IV-----QGT-----  138 (545)
T ss_pred             EEEECCCCCEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHCCCCCCEEEEECCCC-EE-----CCH-----
T ss_conf             9997598416546899998499987840778789899999986473121464432048975620-22-----048-----


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC------------------HHEECCE--------EEEE-----------
Q ss_conf             58999999986310132001797789840420------------------1010213--------5762-----------
Q gi|254780622|r  171 PCDIIRQITWLLYKSKELLLKGKRALVTSGPT------------------YEPLDPM--------RYIA-----------  213 (405)
Q Consensus       171 ~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T------------------~E~ID~V--------R~It-----------  213 (405)
                      -+.+.....+++.    .+|+|| +.+|+|-.                  ...+||-        ||+.           
T Consensus       139 yeT~~~aark~~g----~~L~Gk-~~lTaGLGGMgGAQPlA~~mag~v~i~~Evd~~ri~kR~~~gylD~~~~~Ldeai~  213 (545)
T pfam01175       139 YETFAAAARKHFG----GDLAGK-LILTAGLGGMGGAQPLAATMAGAVCLAVEVDESRIDKRLETGYLDEVADDLDEALA  213 (545)
T ss_pred             HHHHHHHHHHHCC----CCCCCC-EEEECCCCCCCCCCHHHHHHCCCEEEEEEECHHHHHHHHHCCCCEEEECCHHHHHH
T ss_conf             9999999998739----886771-79940677665433577875276289998389999999867970566179999999


Q ss_pred             ----------CCCCCHHH--HHHHHHHHHCCCCEEEEECCCCCCCCCC--EE-EEEHHHHHHHH
Q ss_conf             ----------15772788--9999999825883899841566776567--46-75465778999
Q gi|254780622|r  214 ----------NRSSGQQG--HAIAKSLAYFGAEVILISGPVSIADPPN--VM-TIHVERAEDML  262 (405)
Q Consensus       214 ----------N~SSGk~G--~~iA~~~~~~Ga~V~li~g~~~~~~~~~--~~-~i~v~t~~em~  262 (405)
                                ..|=|-.|  ..|-+++..+|..+.+++..++...|-+  +. -+.++.+++|.
T Consensus       214 ~~~~A~~~~~~iSIgl~GNaadv~e~l~~r~i~pDlvTDQTSaHDPl~GY~P~G~s~eEa~~lr  277 (545)
T pfam01175       214 RAKEARAAGEPLSIGLLGNAADVLPELVRRGIRPDLVTDQTSAHDPLNGYLPAGYTLEEAAELR  277 (545)
T ss_pred             HHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             9999987498438998242999999999669986377776545585336488999999999998


No 457
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=63.47  E-value=7.3  Score=18.90  Aligned_cols=63  Identities=16%  Similarity=0.174  Sum_probs=30.5

Q ss_pred             HHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             9999998798899985856863069899999747975820767887787743001144655788411
Q gi|254780622|r   24 LIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDLLVVAPA   90 (405)
Q Consensus        24 l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~~iVaPa   90 (405)
                      .+|.|.+.|++|.+.=.+....+.  ...+.+....+-... +.. ....++-.+-..+|++|+-|.
T Consensus        15 ~a~~L~~~G~~v~~~D~~~~~~~~--~~~~~L~~~gi~~~~-g~~-~~~~~~~~~~~~~d~vV~SPG   77 (459)
T PRK02705         15 AARLLKAQGWEVVVSERNDSPELL--ERQQELEQEGITVEL-GKP-LELESFQPWLDQPDLVVVSPG   77 (459)
T ss_pred             HHHHHHHCCCEEEEEECCCCCCHH--HHHHHHHHCCCEEEE-CCC-CCCCCHHHHCCCCCEEEECCC
T ss_conf             999999789959999898992347--899999875986981-676-664301331167888998996


No 458
>PRK05414 urocanate hydratase; Provisional
Probab=63.41  E-value=8.8  Score=18.40  Aligned_cols=122  Identities=22%  Similarity=0.244  Sum_probs=69.0

Q ss_pred             HHHCCCCCEEEECC---------CCCHHHHHHHHHHHHHHHHHHCCC-----------CCCCCHHHHHHCCCCCCCCCCC
Q ss_conf             75227996898405---------660000038899999998640001-----------3465212553103223334345
Q gi|254780622|r  111 LLAKGDQPVLIAPA---------MNFMMWAKPATQRNVEILQKDGCY-----------FIGPESGAMAESNGYGVGRMSE  170 (405)
Q Consensus       111 ~la~~~~pi~iaPa---------Mn~~M~~~p~~~~nl~~L~~~g~~-----------vi~P~~g~la~c~~~G~grl~e  170 (405)
                      ++..+++|+=++|+         -|.+|--|=++.+++++|...|+.           .|+|+- .+     .|.     
T Consensus        81 L~vqSG~Pvg~f~th~~aPRVliaN~~lVp~wa~~~~f~~l~~~Gl~~YGQMTAGsw~YIG~QG-Iv-----qGT-----  149 (558)
T PRK05414         81 LLVQSGKPVGVFKTHPDAPRVLIANSNLVPHWANWEHFNELDAKGLAMYGQMTAGSWIYIGSQG-IV-----QGT-----  149 (558)
T ss_pred             EEEECCCCCEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHCCCCCCEEEEECCCC-EE-----CCH-----
T ss_conf             9997598416556899998499986831678789899998876483121364432058976620-22-----148-----


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC------------------HHEECCEE--------EEE-----------
Q ss_conf             58999999986310132001797789840420------------------10102135--------762-----------
Q gi|254780622|r  171 PCDIIRQITWLLYKSKELLLKGKRALVTSGPT------------------YEPLDPMR--------YIA-----------  213 (405)
Q Consensus       171 ~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T------------------~E~ID~VR--------~It-----------  213 (405)
                      -+.++....+++.    .+|+|| +.+|+|-.                  ...+||-|        |+.           
T Consensus       150 yeT~~~aark~~g----~~L~Gk-~~vTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~kR~~~gylD~~~~~Ldeai~  224 (558)
T PRK05414        150 YETFVEAGRQHFG----GDLAGR-LILTAGLGGMGGAQPLAATMAGAVCLAVEVDESRIDKRLRTGYVDEKADDLDEALA  224 (558)
T ss_pred             HHHHHHHHHHHCC----CCCCCC-EEEECCCCCCCCCCHHHHHHCCCEEEEEEECHHHHHHHHHCCCCEEECCCHHHHHH
T ss_conf             9999999998638----886771-89841777665433567875276289998389999999866971244178999999


Q ss_pred             ----------CCCCCHHH--HHHHHHHHHCCCCEEEEECCCCCCCCC
Q ss_conf             ----------15772788--999999982588389984156677656
Q gi|254780622|r  214 ----------NRSSGQQG--HAIAKSLAYFGAEVILISGPVSIADPP  248 (405)
Q Consensus       214 ----------N~SSGk~G--~~iA~~~~~~Ga~V~li~g~~~~~~~~  248 (405)
                                ..|=|-.|  ..|-+++..+|..+.+++..++...|-
T Consensus       225 ~~~~A~~~k~~iSIgl~GNaadl~~~l~~r~i~pDlvTDQTSaHDPl  271 (558)
T PRK05414        225 LAEEAKAAGEPVSIGLLGNAADVLPELVRRGIRPDLVTDQTSAHDPL  271 (558)
T ss_pred             HHHHHHHCCCCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             99999863886068762239999999995799751677765455842


No 459
>PRK09183 transposase/IS protein; Provisional
Probab=63.30  E-value=11  Score=17.83  Aligned_cols=33  Identities=15%  Similarity=0.188  Sum_probs=24.8

Q ss_pred             EEEEECCCCCHHHHHH--HHHHHHCCCCEEEEECC
Q ss_conf             3576215772788999--99998258838998415
Q gi|254780622|r  209 MRYIANRSSGQQGHAI--AKSLAYFGAEVILISGP  241 (405)
Q Consensus       209 VR~ItN~SSGk~G~~i--A~~~~~~Ga~V~li~g~  241 (405)
                      |=++.+..+||+-.|+  +.++..+|+.|.++..+
T Consensus       104 vil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~  138 (258)
T PRK09183        104 IVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAA  138 (258)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_conf             79989999868999999999999879939997899


No 460
>pfam03853 YjeF_N YjeF-related protein N-terminus.
Probab=63.15  E-value=11  Score=17.66  Aligned_cols=38  Identities=39%  Similarity=0.516  Sum_probs=32.0

Q ss_pred             CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             179778984042010102135762157727889999999825883899841
Q gi|254780622|r  190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      ..+++|+|-+|+-             --|--|+++|+.+..+|++|+++.-
T Consensus        26 ~~~~~v~il~G~G-------------NNGGDGlv~Ar~L~~~g~~V~v~~~   63 (170)
T pfam03853        26 PAGKRVLVLCGPG-------------NNGGDGLAAARHLAQRGYKVTVLLL   63 (170)
T ss_pred             CCCCEEEEEECCC-------------CCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             7788699998799-------------8728899999999987990799996


No 461
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC; InterPro: IPR011967    This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring . The sequences included in this entry are all found in possible operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN . Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. .
Probab=63.11  E-value=4.7  Score=20.11  Aligned_cols=23  Identities=22%  Similarity=0.338  Sum_probs=14.2

Q ss_pred             CCEEEEEECCHHHHHHHHCCCCC
Q ss_conf             65578841118889885202455
Q gi|254780622|r   82 CDLLVVAPASANFIAHVAHGMVY  104 (405)
Q Consensus        82 aD~~iVaPaTaNtiaK~A~GiaD  104 (405)
                      +|.+|-.=.|.=+|.-+|.|++.
T Consensus       112 ad~iiasNTSSlSIta~AAglar  134 (508)
T TIGR02279       112 ADAIIASNTSSLSITALAAGLAR  134 (508)
T ss_pred             HHHHHHHCHHHHHHHHHHHHHCC
T ss_conf             01525623257779999973138


No 462
>PRK03971 putative deoxyhypusine synthase; Provisional
Probab=62.76  E-value=10  Score=17.92  Aligned_cols=38  Identities=13%  Similarity=0.093  Sum_probs=20.6

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH
Q ss_conf             569999528478999999999999879889998585686
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ   44 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~   44 (405)
                      .+|.|+.||++-.-..-++++.|.|+|. |.+|.|..|.
T Consensus        67 ~tifL~~tg~misaGlr~ii~~Li~~~~-VD~iVtTgg~  104 (334)
T PRK03971         67 ATVFLGYTSNIVSSGLREIIAYLVKEKK-VDVIVTTAGG  104 (334)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHCC-EEEEEECCCC
T ss_conf             6699975431002217999999998286-2089805886


No 463
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen.  It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=62.68  E-value=12  Score=17.61  Aligned_cols=27  Identities=26%  Similarity=0.434  Sum_probs=22.2

Q ss_pred             CHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             8478999999999999879889998585
Q gi|254780622|r   14 GSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus        14 Gsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      ||++ ..+.+|++.|.+.|++|.++.+.
T Consensus        14 gG~~-~~~~~la~~L~~~Gh~V~v~t~~   40 (394)
T cd03794          14 GGGA-FRTTELAEELVKRGHEVTVITGS   40 (394)
T ss_pred             CCHH-HHHHHHHHHHHHCCCEEEEEECC
T ss_conf             8299-99999999999779979999547


No 464
>PRK04527 argininosuccinate synthase; Provisional
Probab=62.45  E-value=12  Score=17.58  Aligned_cols=38  Identities=32%  Similarity=0.418  Sum_probs=29.4

Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHH
Q ss_conf             88556999952847899999999999987988999858568
Q gi|254780622|r    3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSA   43 (405)
Q Consensus         3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A   43 (405)
                      |+.|||+|+-||+.-   +--.+.+|++.|++|.+++-.-+
T Consensus         1 M~~kkVvLAySGGLD---TSv~l~wL~e~g~~Vi~~~ad~G   38 (397)
T PRK04527          1 MSTKDIVLAFSGGLD---TSFCIPYLQERGYAVHTVFADTG   38 (397)
T ss_pred             CCCCEEEEEECCCCH---HHHHHHHHHHCCCCEEEEEEECC
T ss_conf             998759999089728---99999999875994799999789


No 465
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=62.28  E-value=12  Score=17.56  Aligned_cols=148  Identities=18%  Similarity=0.214  Sum_probs=62.2

Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH---H----HH-----HCCHHHHH-HHHCCCCCCCCCCCCC
Q ss_conf             8855699995284789999999999998798899985856---8----63-----06989999-9747975820767887
Q gi|254780622|r    3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS---A----QK-----FITPLIVG-AISNRRVYTHLLSYKE   69 (405)
Q Consensus         3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~---A----~~-----fi~~~~l~-~lt~~~v~~~~~~~~~   69 (405)
                      +-|++|.+.=+|=.+    --++-..++.|.+|.++-...   |    .+     |-.+.++. ++....|+|-.++   
T Consensus         5 ~p~~tIGIlGgGQLg----rMla~aA~~lG~~v~vldp~~~~PA~~va~~~~~~~~~D~~al~~fa~~~DviT~E~E---   77 (377)
T PRK06019          5 LPGKTIGIIGGGQLG----RMLALAAAPLGYKVIVLDPDADCPAAQVADRVIVADYDDVAALRELAEQCDVITYEFE---   77 (377)
T ss_pred             CCCCEEEEECCCHHH----HHHHHHHHHCCCEEEEECCCCCCCHHHHCCEEEECCCCCHHHHHHHHHCCCEEEECCC---
T ss_conf             999999998786899----9999999978998999848984984783784898688989999999845999997817---


Q ss_pred             CCCCCCCCC---CCCCCEEEEEECCHHHHHHHHCCCCCC-HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHH-HHH
Q ss_conf             787743001---144655788411188898852024552-146667522799689840566000003889999999-864
Q gi|254780622|r   70 GYESNHIQL---ANECDLLVVAPASANFIAHVAHGMVYD-LASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEI-LQK  144 (405)
Q Consensus        70 ~~~~~Hi~l---~~~aD~~iVaPaTaNtiaK~A~GiaD~-llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~-L~~  144 (405)
                           ||..   ..-.+-.-|.|.+ +++.     ++-| +.--.++...+-|  .+|..--   +   ..+.+.. +.+
T Consensus        78 -----nI~~~~L~~le~~~~v~P~~-~al~-----i~QdR~~eK~~l~~lgip--tapf~~v---~---s~~dl~~~~~~  138 (377)
T PRK06019         78 -----NVPAEALDLLAARVPVPPGP-DALA-----IAQDRLTEKQFLDELGIP--VAPFALV---D---SAEDLDAAIAD  138 (377)
T ss_pred             -----CCCHHHHHHHHHCCCCCCCH-HHHH-----HHHHHHHHHHHHHHCCCC--CCCEEEE---C---CHHHHHHHHHH
T ss_conf             -----68999999997089668798-9999-----886279999999976999--8880671---8---99999999997


Q ss_pred             HCC-CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf             000-13465212553103223334345589999999
Q gi|254780622|r  145 DGC-YFIGPESGAMAESNGYGVGRMSEPCDIIRQIT  179 (405)
Q Consensus       145 ~g~-~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~  179 (405)
                      .|+ .|+.+..|.   ++..|.-++-+++++.....
T Consensus       139 lg~P~vlKt~~~G---YDGKGq~~i~s~~dl~~a~~  171 (377)
T PRK06019        139 LGLPAVLKTRRGG---YDGKGQWVLRSEADLDAAWA  171 (377)
T ss_pred             CCCCEEEECCCCC---CCCCCCEEECCHHHHHHHHH
T ss_conf             2997699513346---18870189778889999998


No 466
>PRK03333 coaE dephospho-CoA kinase/unknown domain fusion protein; Provisional
Probab=62.18  E-value=7.5  Score=18.81  Aligned_cols=38  Identities=26%  Similarity=0.330  Sum_probs=25.6

Q ss_pred             EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH-HHHHHCC
Q ss_conf             9999528478999999999999879889998585-6863069
Q gi|254780622|r    8 IALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK-SAQKFIT   48 (405)
Q Consensus         8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~-~A~~fi~   48 (405)
                      ..+|+||||++-|+. +.+.|...|+.|  |=.+ -|.+.+.
T Consensus         2 ~~IGLTGGIgsGKSt-v~~~l~~~G~~v--iDaD~iar~v~~   40 (394)
T PRK03333          2 LRIGLTGGIGAGKST-VSATLAQLGAVV--VDGDVLAREVVE   40 (394)
T ss_pred             EEEEEECCCCCCHHH-HHHHHHHCCCEE--EEHHHHHHHHHC
T ss_conf             499830675557999-999999879949--985799999943


No 467
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=62.07  E-value=12  Score=17.54  Aligned_cols=79  Identities=16%  Similarity=0.195  Sum_probs=48.2

Q ss_pred             CCCCCCHHHHHHHHC-CCCCEEEE----CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH---CCCCCCCCCCCH
Q ss_conf             024552146667522-79968984----0566000003889999999864000134652125531---032233343455
Q gi|254780622|r  100 HGMVYDLASAILLAK-GDQPVLIA----PAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAE---SNGYGVGRMSEP  171 (405)
Q Consensus       100 ~GiaD~llt~~~la~-~~~pi~ia----PaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~---c~~~G~grl~e~  171 (405)
                      +|.++.+-+....+. ...||.++    |-|-..| +|.+++.--..|++.|+..+-+.......   --+.|.|.+.+-
T Consensus        10 ~Gp~G~le~~~~~~~~~~~~iAli~HPHPl~gGtm-~nkvv~~la~~l~~~G~atlRfNfRgvG~S~G~fD~GiGE~~Da   88 (210)
T COG2945          10 NGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTM-NNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDA   88 (210)
T ss_pred             CCCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCC-CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHH
T ss_conf             27754211033787788775279638981226766-77999999999986896389640332567778656885528889


Q ss_pred             HHHHHHHH
Q ss_conf             89999999
Q gi|254780622|r  172 CDIIRQIT  179 (405)
Q Consensus       172 ~~I~~~~~  179 (405)
                      ...++++.
T Consensus        89 ~aaldW~~   96 (210)
T COG2945          89 AAALDWLQ   96 (210)
T ss_pred             HHHHHHHH
T ss_conf             99999998


No 468
>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed
Probab=61.93  E-value=12  Score=17.52  Aligned_cols=37  Identities=35%  Similarity=0.470  Sum_probs=26.1

Q ss_pred             CCEEE-EEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             97789-84042010102135762157727889999999825883899841566
Q gi|254780622|r  192 GKRAL-VTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS  243 (405)
Q Consensus       192 gk~vl-ITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~  243 (405)
                      ++++| |-+|=-.-|+               +.+++++..+|.+|+++.|--+
T Consensus       100 ~~~~llVaGGiGiAPl---------------~~l~~~l~~~~~~v~~i~G~r~  137 (248)
T PRK00054        100 GGKVLLVGGGIGVAPL---------------YELAKQLKAKGVEVTTVLGART  137 (248)
T ss_pred             CCEEEEEECCCCCCCH---------------HHHHHHHHHCCCCEEEEEECCC
T ss_conf             9619999676745768---------------9999999972997799997588


No 469
>COG1157 FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=61.92  E-value=12  Score=17.52  Aligned_cols=137  Identities=20%  Similarity=0.283  Sum_probs=84.0

Q ss_pred             EEEEECCHHHHHHHHCCCCCCHHHH-HHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC--------CCHH
Q ss_conf             7884111888988520245521466-675227996898405660000038899999998640001346--------5212
Q gi|254780622|r   85 LVVAPASANFIAHVAHGMVYDLASA-ILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIG--------PESG  155 (405)
Q Consensus        85 ~iVaPaTaNtiaK~A~GiaD~llt~-~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~--------P~~g  155 (405)
                      .+-.|.+.+.+++.-+|...-+=.. ..-.....|+.-.|       -||..++-++.--.-|+..|+        -+.|
T Consensus        95 ~~~v~~g~~lLGRVld~~G~plDg~~~~~~~~~~~l~~~p-------p~pm~R~~I~~~l~tGVRaIDgllT~G~GQRiG  167 (441)
T COG1157          95 PLSVPVGDALLGRVLDGLGRPLDGGGLPDGTERRPLDAPP-------PNPLKRRPIEEPLDTGVRAIDGLLTCGKGQRIG  167 (441)
T ss_pred             CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEE
T ss_conf             5423668666541006688857789999876323145799-------782102654664545614440100224674678


Q ss_pred             HHHHCCCCCCCCCC---------------------CHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEEC
Q ss_conf             55310322333434---------------------558999999986310132001797789840420101021357621
Q gi|254780622|r  156 AMAESNGYGVGRMS---------------------EPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIAN  214 (405)
Q Consensus       156 ~la~c~~~G~grl~---------------------e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN  214 (405)
                      .+|   ..|.||--                     .-.++-+++++.+....   | .|.|+|-|-.-..++..++    
T Consensus       168 IFA---gsGVGKStLLgMiar~t~aDv~ViaLIGERGREVrEFIE~~Lg~eg---l-~rsViVvATSD~s~l~R~~----  236 (441)
T COG1157         168 IFA---GSGVGKSTLLGMIARNTEADVNVIALIGERGREVREFIEKDLGEEG---L-KRSVVVVATSDESALMRLK----  236 (441)
T ss_pred             EEE---CCCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHCCHHH---C-CCEEEEEECCCCCHHHHHH----
T ss_conf             871---6998689999999624669879999760664059999998602330---3-5269999789889899988----


Q ss_pred             CCCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             577278899999998258838998415
Q gi|254780622|r  215 RSSGQQGHAIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       215 ~SSGk~G~~iA~~~~~~Ga~V~li~g~  241 (405)
                        -+.+..+||++|+.+|.+|-|+..+
T Consensus       237 --aa~~At~IAEyFRDqG~~VLL~mDS  261 (441)
T COG1157         237 --AAFTATTIAEYFRDQGKRVLLIMDS  261 (441)
T ss_pred             --HHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf             --8999999999998679859999613


No 470
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=61.79  E-value=12  Score=17.51  Aligned_cols=32  Identities=9%  Similarity=0.086  Sum_probs=15.6

Q ss_pred             HHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf             99986400013465212553103223334345589999999
Q gi|254780622|r  139 VEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQIT  179 (405)
Q Consensus       139 l~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~  179 (405)
                      .+..+..|..+..=         +.+.|+-+++++|-+.+.
T Consensus        96 ~~ia~~~g~~v~~l---------~~~~g~~~~~~~ve~~L~  127 (368)
T PRK13479         96 AKIAEYLGIAHVVL---------DTGEDEPPDAAAVEAALA  127 (368)
T ss_pred             HHHHHHHCCCEEEE---------ECCCCCCCCHHHHHHHHH
T ss_conf             99999819975998---------789999889999999997


No 471
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=61.46  E-value=12  Score=17.47  Aligned_cols=16  Identities=31%  Similarity=0.322  Sum_probs=8.1

Q ss_pred             HHHHHHHHHHHHCCCC
Q ss_conf             8999999986400013
Q gi|254780622|r  134 ATQRNVEILQKDGCYF  149 (405)
Q Consensus       134 ~~~~nl~~L~~~g~~v  149 (405)
                      .+.+|++...+.|.-+
T Consensus        81 ~~~~~~~~~~~~~~~~   96 (265)
T PRK00048         81 ATLENLEFALEHGKPL   96 (265)
T ss_pred             HHHHHHHHHHHCCCCE
T ss_conf             9999999999749977


No 472
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=61.39  E-value=12  Score=17.46  Aligned_cols=31  Identities=16%  Similarity=0.075  Sum_probs=21.9

Q ss_pred             EEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHH
Q ss_conf             99952847899999999999987988999858568
Q gi|254780622|r    9 ALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSA   43 (405)
Q Consensus         9 llgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A   43 (405)
                      +.|-||-|-    -.+++.|...|+.|++.....+
T Consensus         4 VtGATG~iG----~~v~~~L~~~g~~v~~~~R~~~   34 (285)
T TIGR03649         4 LTGGTGKTA----SRIARLLQAASVPFLVASRSSS   34 (285)
T ss_pred             EECCCCHHH----HHHHHHHHHCCCCEEEEECCHH
T ss_conf             998998189----9999999868997899958856


No 473
>TIGR01584 citF citrate lyase, alpha subunit; InterPro: IPR006472   These sequences, from both Gram-positive and Gram-negative bacteria, represent the alpha subunit of the holoenzyme citrate lyase composed of alpha (2.8.3.10 from EC), beta, and acyl carrier protein subunits in a stoichiometric relationship of 6:6:6. Citrate lyase is an enzyme which converts citrate to oxaloacetate. In bacteria, this reaction is involved in citrate fermentation. The alpha subunit catalyzes the reaction Acetyl-CoA + citrate = acetate + (3S)-citryl-CoA. The protein from Lactococcus lactis subsp. lactis has been experimentally characterised . ; GO: 0008814 citrate CoA-transferase activity, 0006084 acetyl-CoA metabolic process, 0005737 cytoplasm, 0009346 citrate lyase complex.
Probab=61.33  E-value=12  Score=17.53  Aligned_cols=130  Identities=25%  Similarity=0.329  Sum_probs=79.3

Q ss_pred             CCEEEEEECCCHHEECCEEEEECCC---------------CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHH
Q ss_conf             9778984042010102135762157---------------7278899999998258838998415667765674675465
Q gi|254780622|r  192 GKRALVTSGPTYEPLDPMRYIANRS---------------SGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVE  256 (405)
Q Consensus       192 gk~vlITaG~T~E~ID~VR~ItN~S---------------SGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~  256 (405)
                      |+==+|-+|-+  +| +|=||.-++               -|-|||||-.+-|.  =.|.+|+-..  -+.|+...    
T Consensus       130 GRarave~Ge~--~I-DVAFLG~P~~De~GNaNG~~GKs~cGSLGYA~vDA~YA--D~Vv~iTd~l--v~YPn~Pa----  198 (496)
T TIGR01584       130 GRARAVESGEL--KI-DVAFLGVPCCDEMGNANGITGKSKCGSLGYAIVDAQYA--DKVVLITDEL--VPYPNLPA----  198 (496)
T ss_pred             CEEEEEECCCC--EE-EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC--CEEEEEECCC--CCCCCCCE----
T ss_conf             72778824880--56-41020788873025677888765666513566523563--9899830455--88858760----


Q ss_pred             HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCC-----CCCCEEEEEEC
Q ss_conf             7789999998505888799740444443222210112334557751045521806898876214-----89958999811
Q gi|254780622|r  257 RAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQ-----CRPSIVVGFAA  331 (405)
Q Consensus       257 t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k-----~~~~~lVGFka  331 (405)
                              -.+..+.|+++-.=||.|  |.+...|           ..++..+|+=|. |++.-     .-+=+-=||..
T Consensus       199 --------SI~Q~~VD~vV~vd~vGd--P~kI~sG-----------AtR~t~dPkeLl-IA~~~~~VI~aSGYfKdGFs~  256 (496)
T TIGR01584       199 --------SIKQTQVDYVVKVDAVGD--PKKIGSG-----------ATRFTKDPKELL-IAKKAADVIVASGYFKDGFSL  256 (496)
T ss_pred             --------EEECCCCCEEEEEEEECC--CCCEECC-----------CCCCCCCCHHHH-HHHHHHHEEEECCCCCCCCEE
T ss_conf             --------120033314899834239--8850013-----------300689867888-864230002226831377156


Q ss_pred             CCCH---HH---HHHHHHHHHCCCCEEEE
Q ss_conf             4123---89---99999999749989999
Q gi|254780622|r  332 ETQC---IE---QNAREKLLNKGADFIVS  354 (405)
Q Consensus       332 ET~~---l~---~~A~~Kl~~K~~D~IVA  354 (405)
                      ||+.   .+   .-.++||.++|.-+=.+
T Consensus       257 QtGtGGAaLAVtrfL~e~M~~~NikA~fG  285 (496)
T TIGR01584       257 QTGTGGAALAVTRFLKEKMIEKNIKASFG  285 (496)
T ss_pred             ECCCHHHHHHHHHHHHHHHHHHCCEEEEC
T ss_conf             53631379999998889888609507641


No 474
>pfam06258 DUF1022 Protein of unknown function (DUF1022). This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=61.30  E-value=12  Score=17.45  Aligned_cols=128  Identities=15%  Similarity=0.148  Sum_probs=60.7

Q ss_pred             CCCCEEEEE-ECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHC
Q ss_conf             179778984-0420101021357621577278899999998258838998415667765674675465778999999850
Q gi|254780622|r  190 LKGKRALVT-SGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKA  268 (405)
Q Consensus       190 l~gk~vlIT-aG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~  268 (405)
                      +...+|+|- +|+++-+.     .+...--+++..|.+.+...|..+.+..++              .|.+++.+.+.+.
T Consensus       141 ~~~p~i~vLIGG~sk~~~-----~~~~~~~~l~~~i~~l~~~~~~~l~it~SR--------------RTP~~~~~~l~~~  201 (308)
T pfam06258       141 LPRPRVAVLVGGPSKHFR-----WDADAARRLLEQLQALLEAYGGSLLITTSR--------------RTPEAAEAALRKL  201 (308)
T ss_pred             CCCCEEEEEECCCCCCCC-----CCHHHHHHHHHHHHHHHHHCCCEEEEEECC--------------CCCHHHHHHHHHH
T ss_conf             778769999655787888-----899999999999999998779729999468--------------8969999999986


Q ss_pred             CC-C-CEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCC-EEEEEECCCC-HHHHHHHHHH
Q ss_conf             58-8-87997404444432222101123345577510455218068988762148995-8999811412-3899999999
Q gi|254780622|r  269 LP-V-DIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPS-IVVGFAAETQ-CIEQNAREKL  344 (405)
Q Consensus       269 ~~-~-D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~-~lVGFkaET~-~l~~~A~~Kl  344 (405)
                      +. . .+++.     |=..+++..+=+..+   +    ...=|+|=..-+++--.-.+ +.| |.++.. .=.++-.+.|
T Consensus       202 ~~~~~~~~~~-----~~~~~Npy~~~L~~A---d----~iiVT~DSvSMisEA~~tGkPV~i-~~l~~~~~r~~~f~~~L  268 (308)
T pfam06258       202 LGPRPGLYVW-----DGTGPNPYFGFLAWA---D----AVVVTADSVSMVSEAAATGAPVGV-LPLEGKRGKFARFHDSL  268 (308)
T ss_pred             HCCCCEEEEC-----CCCCCCHHHHHHHHC---C----EEEEECCHHHHHHHHHHCCCCEEE-EECCCCCHHHHHHHHHH
T ss_conf             0899728982-----798864589999858---8----689906718899999864997799-96776665999999999


Q ss_pred             HHCCC
Q ss_conf             97499
Q gi|254780622|r  345 LNKGA  349 (405)
Q Consensus       345 ~~K~~  349 (405)
                      .+.|.
T Consensus       269 ~~~g~  273 (308)
T pfam06258       269 EERGR  273 (308)
T ss_pred             HHCCC
T ss_conf             98799


No 475
>TIGR01043 ATP_syn_A_arch ATP synthase archaeal, A subunit; InterPro: IPR005726   ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (F-, V- and A-ATPases contain rotary motors) and in the type of ions they transport , .  F-ATPases (F1F0-ATPases) in mitochondria, chloroplasts and bacterial plasma membranes are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases) are primarily found in eukaryotic vacuoles, catalysing ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases) are found in Archaea and function like F-ATPases. P-ATPases (E1E2-ATPases) are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP.   A-ATPases (or A1A0-ATPase) (3.6.3.14 from EC) are found exclusively in Archaea and display a close resemblance in structure and subunit composition with V-ATPases, although their function in both ATP synthesis and ATP hydrolysis is closer to that of F-ATPases . A-ATPases are composed of two linked complexes: the A1 complex consisting of seven subunits contains the catalytic core that synthesizes/hydrolyses ATP, while the A0 complex consisting of at least two subunits forms the membrane-spanning pore . The rotary motor in A-ATPases is composed of only two subunits, the stator subunit I and the rotor subunit C . A-ATPases may have arisen as an adaptation to the different cellular needs and the more extreme environmental conditions faced by Archaeal species.    This entry represents the alpha subunit from the A1 complex of A-ATPases. The A1 complex contains three copies each of subunits alpha (or A) and beta (or B) (IPR005724 from INTERPRO), both of which form the headpiece that participates in nucleotide binding. However, only the alpha subunit is catalytic, the beta subunit being regulatory in function .   More information about this protein can be found at Protein of the Month: ATP Synthases .; GO: 0016820 hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances, 0015986 ATP synthesis coupled proton transport, 0016021 integral to membrane, 0016469 proton-transporting two-sector ATPase complex.
Probab=61.19  E-value=5.4  Score=19.76  Aligned_cols=225  Identities=17%  Similarity=0.211  Sum_probs=106.4

Q ss_pred             HHHHHHHHHHHHHHHCCCC-CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH----CCCCCCCCCCEEEEEECCCHHE
Q ss_conf             0388999999986400013-4652125531032233343455899999998631----0132001797789840420101
Q gi|254780622|r  131 AKPATQRNVEILQKDGCYF-IGPESGAMAESNGYGVGRMSEPCDIIRQITWLLY----KSKELLLKGKRALVTSGPTYEP  205 (405)
Q Consensus       131 ~~p~~~~nl~~L~~~g~~v-i~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~----~~~~~~l~gk~vlITaG~T~E~  205 (405)
                      -.-+||..|.+-.+-.+.| |+        ||+.|.       +..+.+...-.    ++. .+|-.+.|||.-- .-= 
T Consensus       237 GKTVT~~~LAkws~a~ivvYiG--------CGERGN-------EMt~vl~~FP~l~dp~TG-~pLm~RT~LiANT-SNM-  298 (584)
T TIGR01043       237 GKTVTQQQLAKWSDADIVVYIG--------CGERGN-------EMTEVLEEFPELEDPKTG-KPLMERTVLIANT-SNM-  298 (584)
T ss_pred             CCHHHHHHHHHHHCCCEEEEEC--------CCCCCC-------HHHHHHHHCCCCCCCCCC-HHHHHCCEEEECC-CCC-
T ss_conf             5046777775430473799961--------688752-------589999848786886353-1565420533526-787-


Q ss_pred             ECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---------------CCCCEEEEEHHHHHHHHHHHHH--C
Q ss_conf             0213576215772788999999982588389984156677---------------6567467546577899999985--0
Q gi|254780622|r  206 LDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---------------DPPNVMTIHVERAEDMLQEVLK--A  268 (405)
Q Consensus       206 ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---------------~~~~~~~i~v~t~~em~~~~~~--~  268 (405)
                        |  +=.--||=-+|..||++++.+|++|.|.+.+++=.               --+|+..+-..--.|+|+..=.  .
T Consensus       299 --P--VAAREas~Y~GiTiAEYfRD~GYdv~L~ADSTSRWAEA~ReisgRlEEMPgEEGyPaYLasrLaefYERAG~~~~  374 (584)
T TIGR01043       299 --P--VAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASRLAEFYERAGRVKT  374 (584)
T ss_pred             --C--HHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_conf             --5--344011232110253344116851688724752178999875202102778788624688888776651460223


Q ss_pred             C-C---CCEEEEEHHHH----HHHHHHHHHCCCCCCCCCCCCEEEEEECHHHH-HHHHHCCCCCC--EEEEEECCCCHHH
Q ss_conf             5-8---88799740444----44322221011233455775104552180689-88762148995--8999811412389
Q gi|254780622|r  269 L-P---VDIAVMVSAVS----DWRFPKIAGTKIKRKDIGDTMRIDLMENPDIL-KIIGHHQCRPS--IVVGFAAETQCIE  337 (405)
Q Consensus       269 ~-~---~D~~I~aAAVS----Df~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL-~~i~~~k~~~~--~lVGFkaET~~l~  337 (405)
                      + .   ..-+-...|||    ||.=+      +  .    .-+|++++.-==| ..|++++..|.  .+-+|++=.+.+.
T Consensus       375 l~~~~~~gsv~v~gAVSPPGGDfsEP------V--t----~~TlR~vkvFWaLD~~La~~RHfPaInW~~sySlY~d~~~  442 (584)
T TIGR01043       375 LGGEEREGSVTVVGAVSPPGGDFSEP------V--T----QNTLRIVKVFWALDAKLAQRRHFPAINWLQSYSLYVDSVQ  442 (584)
T ss_pred             CCCCCCEEEEEEEECCCCCCCCCCCC------C--C----CCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf             16887447899996147755787886------2--2----2744789873001178874378973020114577688899


Q ss_pred             -------HHHHHHHHHCCCCEEEEE-CCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             -------999999997499899992-057767777766118999836985972789989999999999999
Q gi|254780622|r  338 -------QNAREKLLNKGADFIVSN-CILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVADRLCHLIVE  400 (405)
Q Consensus       338 -------~~A~~Kl~~K~~D~IVAN-~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA~~Il~~i~~  400 (405)
                             +.-..++.+.-.+++.-- .|.          .-|.|+.++...+-.+ --.++|+.|-+..++
T Consensus       443 ~W~~~Nv~~~w~~~R~~a~~~L~~E~eL~----------eIV~LVG~d~L~~~~~-~~Le~ar~~re~fL~  502 (584)
T TIGR01043       443 DWWAENVDPDWRELRDEAMDLLQKEAELQ----------EIVQLVGPDALPEKEK-LILEVARLIREAFLQ  502 (584)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHCCCCCCCHHHH-HHHHHHHHHHHHHHH
T ss_conf             99874002779999999999975155677----------7875317756760245-789999999998766


No 476
>PRK07591 threonine synthase; Validated
Probab=61.08  E-value=12  Score=17.43  Aligned_cols=50  Identities=20%  Similarity=0.149  Sum_probs=23.3

Q ss_pred             EEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             7884111888988520245521466675227996898405660000038899999998640001346
Q gi|254780622|r   85 LVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIG  151 (405)
Q Consensus        85 ~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~  151 (405)
                      -|+++-|.|+=+-+|.         .+....-+-++++|.      .  +-...+.+.+.+|..++.
T Consensus       141 ~vv~aSsGNagas~Aa---------yaA~aGi~~~I~vP~------~--~~~~K~~q~~~yGA~vv~  190 (422)
T PRK07591        141 TVSCASTGNLANSVAA---------IAAHAGLDCCVFIPA------D--LEAGKVVGTLVYGPTLVA  190 (422)
T ss_pred             EEEECCCCCHHHHHHH---------HHHHCCCCEEEEEEC------C--CCHHHHHHHHHCCCEEEE
T ss_conf             8998189978999999---------999839956999308------8--888899989856998999


No 477
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=60.89  E-value=12  Score=17.41  Aligned_cols=174  Identities=18%  Similarity=0.179  Sum_probs=97.2

Q ss_pred             EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
Q ss_conf             84056600000388999999986400013465212553103223334345589999999863101320017977898404
Q gi|254780622|r  121 IAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSG  200 (405)
Q Consensus       121 iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG  200 (405)
                      +-|-=...-.+-...+++++.|.+.|+.=+-+       ||..|.+-....++-..-+.......     . .++-|-+|
T Consensus        10 vTPF~~dg~iD~~~l~~~v~~li~~Gv~gi~v-------~GstGE~~~Ls~eEr~~v~~~~v~~~-----~-grvpvi~g   76 (296)
T PRK03620         10 VTPFDADGSFDEAAYREHLEWLAPYGAAALFA-------AGGTGEFFSLTPDEYSQVVRAAVEAC-----A-GRVPVIAG   76 (296)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CCCCCCHHHCCHHHHHHHHHHHHHHH-----C-CCCEEEEC
T ss_conf             18838995959999999999999779998996-------84231343489999999999999983-----8-97359825


Q ss_pred             CCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHH
Q ss_conf             20101021357621577278899999998258838998415667765674675465778999999850588879974044
Q gi|254780622|r  201 PTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAV  280 (405)
Q Consensus       201 ~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAV  280 (405)
                      ..           . ++ +.-.++|+++...||+-.++.-       |++....-+...+.++.+.++.+.-+++-.   
T Consensus        77 vg-----------~-~t-~~ai~la~~A~~~Gadai~v~p-------Pyy~~~~~~~l~~~~~~ia~a~~lPi~lYn---  133 (296)
T PRK03620         77 AG-----------G-GT-AQAIEYAQAAERAGADGILLLP-------PYLTEAPQEGLAAHVEAVCKSTDLGVIVYN---  133 (296)
T ss_pred             CC-----------C-CH-HHHHHHHHHHHHCCCCEEEECC-------CCCCCCCHHHHHHHHHHHHHHCCCCEEEEC---
T ss_conf             77-----------5-37-9999999999982999899669-------867899999999999999983189977517---


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             4443222210112334557751045521806898876214899589998114123899999999974998999920
Q gi|254780622|r  281 SDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNC  356 (405)
Q Consensus       281 SDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~  356 (405)
                         +            ...       .-+|+.+..+.+ +.|  -++|+|--+.++. +..+-+.+-+-++.+.+.
T Consensus       134 ---~------------~~~-------~~~~~~l~~L~~-~~p--nivgiKdss~d~~-~~~~~~~~~~~~~~v~~G  183 (296)
T PRK03620        134 ---R------------DNA-------VLTADTLARLAE-RCP--NLIGFKDGVGDIE-LMVRITRALGDRLLYLGG  183 (296)
T ss_pred             ---C------------CCC-------CCCHHHHHHHHH-HCC--CEEEEEECCCCHH-HHHHHHHHCCCCEEEEEC
T ss_conf             ---8------------887-------769999999997-289--8899995868899-999999976997599828


No 478
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=60.77  E-value=12  Score=17.53  Aligned_cols=38  Identities=24%  Similarity=0.141  Sum_probs=22.2

Q ss_pred             CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC-HHHHHHC
Q ss_conf             56999952847899999999999987988999858-5686306
Q gi|254780622|r    6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT-KSAQKFI   47 (405)
Q Consensus         6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T-~~A~~fi   47 (405)
                      |||.+.=+|-|-+    -++-.+-.+|++|+++=. +.|++-+
T Consensus         3 kkVAVIGAGvMGs----GwAa~FA~aG~~V~L~Dp~peA~~ki   41 (489)
T PRK07531          3 MKAACIGGGVIGG----GWAARFLLNGWDVAVFDPHPEAERII   41 (489)
T ss_pred             CEEEEECCCHHHH----HHHHHHHHCCCEEEEEECCHHHHHHH
T ss_conf             6799987188689----99999995799699994887899999


No 479
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=60.76  E-value=13  Score=17.39  Aligned_cols=34  Identities=32%  Similarity=0.393  Sum_probs=26.0

Q ss_pred             EEEEEE-------ECHHHHHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             699995-------28478999999999999879889998585
Q gi|254780622|r    7 KIALIM-------CGSVAVYKSLDLIRRLRERGAVVIPVMTK   41 (405)
Q Consensus         7 ~Illgv-------tGsiaa~k~~~l~~~L~~~g~~V~vv~T~   41 (405)
                      ||.+.-       .||+..| +.+|.+.|.+.|++|.++-+.
T Consensus         1 ~ia~i~~~~~Pp~~GG~e~~-v~~La~~L~~~Gh~V~v~t~~   41 (363)
T cd04955           1 KIAIIGTRGIPAKYGGFETF-VEELAPRLVARGHEVTVYCRS   41 (363)
T ss_pred             CEEEECCCCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECC
T ss_conf             98999168489999878999-999999999779979999878


No 480
>pfam08323 Glyco_transf_5 Starch synthase catalytic domain.
Probab=60.64  E-value=13  Score=17.38  Aligned_cols=31  Identities=19%  Similarity=0.148  Sum_probs=23.4

Q ss_pred             EEECHHHHHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             95284789999999999998798899985856
Q gi|254780622|r   11 IMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus        11 gvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~   42 (405)
                      .-+|+.+-+ +..|.+.|.+.|++|+|+|-.-
T Consensus        12 ~KvGGLgdv-v~~Lp~aL~~~G~~V~vi~P~Y   42 (229)
T pfam08323        12 AKTGGLADV-VGALPKALAKLGHDVRVILPRY   42 (229)
T ss_pred             CCCCCHHHH-HHHHHHHHHHCCCEEEEEECCC
T ss_conf             246658999-9999999997699499993289


No 481
>pfam05179 CDC73 RNA pol II accessory factor, Cdc73 family.
Probab=60.46  E-value=7.2  Score=18.95  Aligned_cols=38  Identities=16%  Similarity=0.349  Sum_probs=28.8

Q ss_pred             CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf             7996898405660000038899999998640001346521255
Q gi|254780622|r  115 GDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAM  157 (405)
Q Consensus       115 ~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~l  157 (405)
                      .+.||+++|+--+.|    ++--|++.+-++|.+| .|+....
T Consensus       115 sr~PIIlvp~a~tSL----itm~NiK~fLqdg~fV-p~~~~~~  152 (273)
T pfam05179       115 SRDPIILIPSAASSL----ITMYNIKDFLQEGKYV-PVDAKRK  152 (273)
T ss_pred             CCCCEEEECCCHHHH----HHHHHHHHHHHCCCCC-CHHHHHH
T ss_conf             999989978751446----6698699998548403-8134210


No 482
>TIGR01138 cysM cysteine synthase B; InterPro: IPR005858    Cysteine synthase B (O-acetylserine (thiol)-lyase, 2.5.1.47 from EC) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK (IPR005859 from INTERPRO) in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=60.20  E-value=8.7  Score=18.41  Aligned_cols=55  Identities=16%  Similarity=0.244  Sum_probs=33.8

Q ss_pred             EEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCC--CCCCCHHH
Q ss_conf             7884111888988520245521466675227996898405660000038899999998640001--34652125
Q gi|254780622|r   85 LVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCY--FIGPESGA  156 (405)
Q Consensus        85 ~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~--vi~P~~g~  156 (405)
                      +||--.|.||      |||    .+.+.|-.+-|+-+  +|..|     .++|-=+.++.+|..  .++|+.|.
T Consensus        64 vlI~ATSGNT------GIA----LAM~aA~~G~~~~L--~MP~N-----~s~ERk~~~~AyGA~L~L~~~~~G~  120 (300)
T TIGR01138        64 VLIEATSGNT------GIA----LAMVAALKGYKMEL--LMPDN-----VSEERKAAMKAYGAELILVDKEEGM  120 (300)
T ss_pred             EEEECCCCCH------HHH----HHHHHHHCCCEEEE--ECCCC-----CHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf             7897168867------899----99999855942899--77877-----4579999998629548984423561


No 483
>TIGR02685 pter_reduc_Leis pteridine reductase; InterPro: IPR014058   Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family..
Probab=60.14  E-value=13  Score=17.32  Aligned_cols=67  Identities=18%  Similarity=0.205  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHCCCCEEEEECC-----------------------------CC----CCCCCCEEEEEHHHHHHHHHHH
Q ss_conf             78899999998258838998415-----------------------------66----7765674675465778999999
Q gi|254780622|r  219 QQGHAIAKSLAYFGAEVILISGP-----------------------------VS----IADPPNVMTIHVERAEDMLQEV  265 (405)
Q Consensus       219 k~G~~iA~~~~~~Ga~V~li~g~-----------------------------~~----~~~~~~~~~i~v~t~~em~~~~  265 (405)
                      |.|.+||..+++.|+.|.+=+-.                             .+    .+....+.+.-...-+|+.+.+
T Consensus        12 RiG~sIAv~LH~~GyrVv~HYh~Sa~aA~~LaaeLNa~R~nsAv~~qaDLsns~tasfsetdGsvPv~L~~~Ce~iid~c   91 (283)
T TIGR02685        12 RIGRSIAVKLHQEGYRVVVHYHRSAAAASTLAAELNAERANSAVVCQADLSNSATASFSETDGSVPVTLLSSCEEIIDAC   91 (283)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHCCCCCCCCCCEEHHHHHHHHHHHH
T ss_conf             52189999985089889994024567899999997340789769996131310000001247742012674378898644


Q ss_pred             HHCCC-CCEEEEEHHHHHHHHHH
Q ss_conf             85058-88799740444443222
Q gi|254780622|r  266 LKALP-VDIAVMVSAVSDWRFPK  287 (405)
Q Consensus       266 ~~~~~-~D~~I~aAAVSDf~~~~  287 (405)
                      ..++- ||+++=.|  |=|+|.-
T Consensus        92 frafGRCDVLVNNA--SafYPTP  112 (283)
T TIGR02685        92 FRAFGRCDVLVNNA--SAFYPTP  112 (283)
T ss_pred             HHCCCCCCEEECCC--CCCCCCC
T ss_conf             32058631023164--0005788


No 484
>PRK09564 coenzyme A disulfide reductase; Reviewed
Probab=60.12  E-value=13  Score=17.32  Aligned_cols=34  Identities=18%  Similarity=0.214  Sum_probs=26.2

Q ss_pred             CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             797789840420101021357621577278899999998258838998415
Q gi|254780622|r  191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~  241 (405)
                      ..|+|+|-+||                 -.|.++|..+.++|.+||++...
T Consensus       148 ~~k~vvViGgG-----------------~ig~E~A~~l~~~G~~Vtiv~~~  181 (443)
T PRK09564        148 EIKRIVIIGAG-----------------FIGLEVVEAAKKLGKNVRIIQLE  181 (443)
T ss_pred             CCCEEEEECCH-----------------HHHHHHHHHHHHCCCEEEEEEEC
T ss_conf             79659999970-----------------99999999998669889999957


No 485
>pfam10727 Rossmann-like Rossmann-like domain. This family of proteins contain a Rossmann-like domain.
Probab=60.08  E-value=12  Score=17.40  Aligned_cols=27  Identities=33%  Similarity=0.364  Sum_probs=20.9

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf             772788999999982588389984156
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAEVILISGPV  242 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~V~li~g~~  242 (405)
                      +-||.|.+|+.++...|+.|+=+++..
T Consensus         4 GaGrvG~~L~~al~~aGh~v~gv~srs   30 (111)
T pfam10727         4 SAGRVGVALGEALERAGHVVHAISAIS   30 (111)
T ss_pred             CCCHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf             765779999999997898289998389


No 486
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=60.06  E-value=13  Score=17.31  Aligned_cols=58  Identities=14%  Similarity=0.252  Sum_probs=35.2

Q ss_pred             CCCCCCEEEEEEECHHH-HHHHHHHHHHHHH-----------CCCEEEEEECHHHHHHCCHHHHH----HHHCCCC
Q ss_conf             98885569999528478-9999999999998-----------79889998585686306989999----9747975
Q gi|254780622|r    1 MDLSGKKIALIMCGSVA-VYKSLDLIRRLRE-----------RGAVVIPVMTKSAQKFITPLIVG----AISNRRV   60 (405)
Q Consensus         1 m~l~~k~IllgvtGsia-a~k~~~l~~~L~~-----------~g~~V~vv~T~~A~~fi~~~~l~----~lt~~~v   60 (405)
                      |+|+||++|=.--=|-. .....+++..|++           .|-.+-.++-+.++|  |..+||    .|.|+.+
T Consensus         1 m~l~grhlLsi~Dls~~ei~~ll~~A~~lk~~~~~~~~~~~L~gk~la~lF~kpSTR--TR~SFE~A~~~LGg~~~   74 (338)
T PRK08192          1 MQFEGSHILSVNQLDLDSIQTIFNVASRMMPYALRQKRTTVLDGAILGNLFFEPSTR--TRVSFGCAFNLLGGHVR   74 (338)
T ss_pred             CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC--HHHHHHHHHHHCCCCEE
T ss_conf             989987859700189999999999999998787478878668999899996289744--69999999998499860


No 487
>PRK07667 uridine kinase; Provisional
Probab=59.96  E-value=13  Score=17.38  Aligned_cols=39  Identities=13%  Similarity=0.122  Sum_probs=27.4

Q ss_pred             CCCEEEEEEECHHHHHHHH---HHHHHHHHCCCEEEEEECHH
Q ss_conf             8556999952847899999---99999998798899985856
Q gi|254780622|r    4 SGKKIALIMCGSVAVYKSL---DLIRRLRERGAVVIPVMTKS   42 (405)
Q Consensus         4 ~~k~IllgvtGsiaa~k~~---~l~~~L~~~g~~V~vv~T~~   42 (405)
                      ++.|.++||.|+-++=|+.   .|++.|...|..|.++-.+.
T Consensus        11 ~~~r~iIgIaG~sgSGKTTla~~L~~~l~~~~~~v~v~~~Dd   52 (190)
T PRK07667         11 KENRFILGIDGLSRSGKTTFVANLKENMKQEGIPFHIFHIDD   52 (190)
T ss_pred             CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             598699997798978899999999999866598379996662


No 488
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Probab=59.92  E-value=10  Score=17.94  Aligned_cols=27  Identities=19%  Similarity=0.179  Sum_probs=15.2

Q ss_pred             EEEECHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             995284789999999999998798899985
Q gi|254780622|r   10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVM   39 (405)
Q Consensus        10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~   39 (405)
                      +.|.|+|.-   .-.+..|.+.|++|.|+=
T Consensus         4 ~VIGaGi~G---ls~A~~La~~G~~V~vle   30 (365)
T TIGR03364         4 IIVGAGILG---LAHAYAAARRGLSVTVIE   30 (365)
T ss_pred             EEECCHHHH---HHHHHHHHHCCCCEEEEC
T ss_conf             999932999---999999997899499998


No 489
>PRK11797 D-ribose pyranase; Provisional
Probab=59.75  E-value=13  Score=17.28  Aligned_cols=58  Identities=26%  Similarity=0.320  Sum_probs=43.3

Q ss_pred             CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEE------HHHHHHHHHHHHHCCCCCEE
Q ss_conf             72788999999982588389984156677656746754------65778999999850588879
Q gi|254780622|r  217 SGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIH------VERAEDMLQEVLKALPVDIA  274 (405)
Q Consensus       217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~------v~t~~em~~~~~~~~~~D~~  274 (405)
                      +|-..-.|...+...||-=.++-+-.+.+.|++++.+.      +.+..|.++++++..+.+-.
T Consensus         4 ~~iLnp~Ll~~La~mGHgD~ivIaDanfPi~~~v~~idLal~~g~P~~~~vL~ail~~~~ve~~   67 (138)
T PRK11797          4 TGLLNSEISSVIARLGHTDTLVICDAGLPIPNGVERIDLALTKGVPSFLDVLDVVLSEMQVEKA   67 (138)
T ss_pred             CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             5666999999999769998799914899989998799820467987799999998634535655


No 490
>pfam01916 DS Deoxyhypusine synthase. Eukaryotic initiation factor 5A (eIF-5A) contains an unusual amino acid, hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine]. The first step in the post-translational formation of hypusine is catalysed by the enzyme deoxyhypusine synthase (DS) EC:1.1.1.249. The modified version of eIF-5A, and DS, are required for eukaryotic cell proliferation.
Probab=59.60  E-value=13  Score=17.26  Aligned_cols=49  Identities=12%  Similarity=0.157  Sum_probs=37.6

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHH
Q ss_conf             5569999528478999999999999879889998585686306989999974
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAIS   56 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt   56 (405)
                      +.+|.|+.+|.+..-..-.+++.|.|+|. |.+|.|..|.  +-.+.++.+.
T Consensus        37 ~~tifLtlagam~saGlr~~ia~LIr~g~-Vd~IvtTgan--lehDi~~~~g   85 (297)
T pfam01916        37 EITIFLGYTSNLISSGMREIIRYLVQHKK-ISALVTTAGG--VEEDLIKCLG   85 (297)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHCCC-EEEEEECCCC--CHHHHHHHHC
T ss_conf             74599972011203768899999998498-4599905753--1578998717


No 491
>PRK05480 uridine kinase; Provisional
Probab=59.44  E-value=13  Score=17.25  Aligned_cols=26  Identities=15%  Similarity=0.169  Sum_probs=17.1

Q ss_pred             CCCEEEEEEECHHHHHHHHHHHHHHHH
Q ss_conf             855699995284789999999999998
Q gi|254780622|r    4 SGKKIALIMCGSVAVYKSLDLIRRLRE   30 (405)
Q Consensus         4 ~~k~IllgvtGsiaa~k~~~l~~~L~~   30 (405)
                      ..|-+++||+|+.++-|+- +++.|.+
T Consensus         3 ~k~P~iIgIaG~SgSGKTT-~a~~L~~   28 (209)
T PRK05480          3 MKQPIIIGIAGGSGSGKTT-VASTIYE   28 (209)
T ss_pred             CCCCEEEEEECCCCCCHHH-HHHHHHH
T ss_conf             8898899998999778999-9999999


No 492
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=59.24  E-value=9.8  Score=18.08  Aligned_cols=120  Identities=23%  Similarity=0.339  Sum_probs=59.7

Q ss_pred             EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf             69999528478999999999999879889998585686306989999974797582076788778774300114465578
Q gi|254780622|r    7 KIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDLLV   86 (405)
Q Consensus         7 ~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~~i   86 (405)
                      ||.+.=.|.+-    -.+++.|.+.|++|.+. ..+.++.   ..|... |-.+..         +  --+++..+|+++
T Consensus         3 kIgfIGlG~MG----~~ma~~L~~~G~~v~v~-dr~~~~~---~~l~~~-Ga~~~~---------s--~~e~~~~~dvvi   62 (295)
T PRK11559          3 KVGFIGLGIMG----KPMSKNLLKAGYSLVVY-DRNPEAI---ADVIAA-GAETAS---------T--AKAIAEQCDVII   62 (295)
T ss_pred             EEEEECCHHHH----HHHHHHHHHCCCEEEEE-ECCHHHH---HHHHHC-CCCCCC---------C--HHHHHHCCCEEE
T ss_conf             89998405769----99999999789958999-2999999---999985-992039---------9--999984388789


Q ss_pred             EEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHH-HHHHHHHHHHHHCCCCCC-CCHHH
Q ss_conf             84111888988520245521466675227996898405660000038-899999998640001346-52125
Q gi|254780622|r   87 VAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKP-ATQRNVEILQKDGCYFIG-PESGA  156 (405)
Q Consensus        87 VaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p-~~~~nl~~L~~~g~~vi~-P~~g~  156 (405)
                      .+=.+..-+-.+..|- +.++..   +..++ +++  -|-|   .+| .+++.-+.+++.|+.+++ |.+|.
T Consensus        63 ~~l~~~~~v~~v~~g~-~gi~~~---~~~g~-iii--d~sT---~~p~~~~~~a~~~~~~g~~~lDaPVsGg  124 (295)
T PRK11559         63 TMLPNSPHVKEVALGE-NGIIEG---AKPGT-VLI--DMSS---IAPLASREISEALKAKGIEMLDAPVSGG  124 (295)
T ss_pred             EECCCCCCHHHHHHCC-CCCHHC---CCCCC-EEE--ECCC---CCHHHHHHHHHHHHHCCCEEEECCCCCC
T ss_conf             9668981077663077-660113---89998-899--8999---9999999999999965983894247688


No 493
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=59.11  E-value=6.2  Score=19.36  Aligned_cols=26  Identities=27%  Similarity=0.281  Sum_probs=15.1

Q ss_pred             EEEEECHHHHHHHHHHHHHHHHCCCEE
Q ss_conf             999528478999999999999879889
Q gi|254780622|r    9 ALIMCGSVAVYKSLDLIRRLRERGAVV   35 (405)
Q Consensus         9 llgvtGsiaa~k~~~l~~~L~~~g~~V   35 (405)
                      ++||||+|+.-|+.- .+.|++.|+.|
T Consensus         1 iigiTG~igSGKStv-~~~l~~~g~~v   26 (179)
T cd02022           1 IIGLTGGIGSGKSTV-AKLLKELGIPV   26 (179)
T ss_pred             CEEEECCCCCCHHHH-HHHHHHCCCEE
T ss_conf             988637875789999-99999879909


No 494
>PRK09954 hypothetical protein; Provisional
Probab=58.98  E-value=13  Score=17.20  Aligned_cols=28  Identities=39%  Similarity=0.574  Sum_probs=23.4

Q ss_pred             ECCCCCHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             2157727889999999825883899841
Q gi|254780622|r  213 ANRSSGQQGHAIAKSLAYFGAEVILISG  240 (405)
Q Consensus       213 tN~SSGk~G~~iA~~~~~~Ga~V~li~g  240 (405)
                      ...|.|=-|.-+|+.+.+.|.+|++|..
T Consensus        88 i~~s~GGvGrNiA~nLarLG~~v~lIs~  115 (362)
T PRK09954         88 IHCSAGGVGRNIAHNLALLGRDVHLLSA  115 (362)
T ss_pred             EEECCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf             6888884899999999976997699999


No 495
>PRK07952 DNA replication protein DnaC; Validated
Probab=58.96  E-value=13  Score=17.19  Aligned_cols=34  Identities=21%  Similarity=0.385  Sum_probs=28.0

Q ss_pred             CEEEEECCCCCHH--HHHHHHHHHHCCCCEEEEECC
Q ss_conf             1357621577278--899999998258838998415
Q gi|254780622|r  208 PMRYIANRSSGQQ--GHAIAKSLAYFGAEVILISGP  241 (405)
Q Consensus       208 ~VR~ItN~SSGk~--G~~iA~~~~~~Ga~V~li~g~  241 (405)
                      ..=|..++-|||+  ..+||.++..+|..|.+++-+
T Consensus        98 gLlF~G~~GTGKThLA~aIan~Li~~G~sVlf~t~~  133 (242)
T PRK07952         98 SFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVA  133 (242)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_conf             179978999978999999999999879949997799


No 496
>pfam00205 TPP_enzyme_M Thiamine pyrophosphate enzyme, central domain. The central domain of TPP enzymes contains a 2-fold Rossman fold.
Probab=58.51  E-value=11  Score=17.82  Aligned_cols=11  Identities=36%  Similarity=0.495  Sum_probs=4.4

Q ss_pred             CCCEEEEEECC
Q ss_conf             46557884111
Q gi|254780622|r   81 ECDLLVVAPAS   91 (405)
Q Consensus        81 ~aD~~iVaPaT   91 (405)
                      .+|++++.-+.
T Consensus        77 ~aDlvl~lG~~   87 (138)
T pfam00205        77 EADLVLAIGAR   87 (138)
T ss_pred             CCCEEEEECCC
T ss_conf             39999997888


No 497
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=58.48  E-value=12  Score=17.61  Aligned_cols=24  Identities=38%  Similarity=0.472  Sum_probs=13.5

Q ss_pred             CHHHHHHHHHH-HHHHHHCCCEEEE
Q ss_conf             84789999999-9999987988999
Q gi|254780622|r   14 GSVAVYKSLDL-IRRLRERGAVVIP   37 (405)
Q Consensus        14 Gsiaa~k~~~l-~~~L~~~g~~V~v   37 (405)
                      |.+..|=..|. +|-++..|.+|.-
T Consensus        23 GH~~~~l~ADv~aRy~Rl~G~~v~f   47 (558)
T COG0143          23 GHLYTYLAADVYARYLRLRGYEVFF   47 (558)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             3678887899999999826975899


No 498
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=58.32  E-value=14  Score=17.12  Aligned_cols=19  Identities=26%  Similarity=0.235  Sum_probs=9.1

Q ss_pred             CCCHHHHHHHHHHHHCCCC
Q ss_conf             7727889999999825883
Q gi|254780622|r  216 SSGQQGHAIAKSLAYFGAE  234 (405)
Q Consensus       216 SSGk~G~~iA~~~~~~Ga~  234 (405)
                      |||-+=..-|+.+..+||.
T Consensus       219 ~TGgTl~~aa~~Lk~~GA~  237 (309)
T PRK01259        219 DTGGTLCKAAEALKERGAK  237 (309)
T ss_pred             HCCHHHHHHHHHHHHCCCC
T ss_conf             3456599999999756996


No 499
>PRK01221 putative deoxyhypusine synthase; Provisional
Probab=58.26  E-value=14  Score=17.12  Aligned_cols=53  Identities=19%  Similarity=0.172  Sum_probs=38.4

Q ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCC
Q ss_conf             556999952847899999999999987988999858568630698999997479758
Q gi|254780622|r    5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVY   61 (405)
Q Consensus         5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~   61 (405)
                      +-++.|+.+|++..-..-.+++.|+|+|. |.+|.|..|.  +..+.++.+ +++-|
T Consensus        54 ~~~~fLtlagam~saGlr~ii~~LIr~g~-Vd~IvtTgan--leeDi~~~~-g~~~y  106 (312)
T PRK01221         54 ADLRFLSFTANLVSTGLRGLIADLIRRGL-FDVVITTCGT--LDHDIARSF-GGKYY  106 (312)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHHHCCC-EEEEECCCCC--CHHHHHHHC-CCCEE
T ss_conf             98399976201125668999999998498-3399816886--016788613-98602


No 500
>COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]
Probab=57.94  E-value=14  Score=17.08  Aligned_cols=155  Identities=17%  Similarity=0.167  Sum_probs=0.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             33343455899999998631013200179778984042010102135762157727889999999825883899841566
Q gi|254780622|r  164 GVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS  243 (405)
Q Consensus       164 G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~  243 (405)
                      |+-|--++++|+.++.++..++-      |.|.+|+=-|.-|=-+...      |  ...+|+-+..-+.          
T Consensus       168 G~~rSr~~e~Il~ev~~Lv~~G~------kEI~L~gqdv~aYG~D~~~------~--~~~l~~Ll~~l~~----------  223 (437)
T COG0621         168 GKERSRPPEDILKEVKRLVAQGV------KEIVLTGQDVNAYGKDLGG------G--KPNLADLLRELSK----------  223 (437)
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCC------EEEEEEEEEHHHCCCCCCC------C--CCCHHHHHHHHHC----------
T ss_conf             87557798999999999998897------4999998811010446777------7--6689999999960----------


Q ss_pred             CCCCCCEEEEEHHH------HHHHHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH
Q ss_conf             77656746754657------7899999985058-8879974044444322221011233455775104552180689887
Q gi|254780622|r  244 IADPPNVMTIHVER------AEDMLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII  316 (405)
Q Consensus       244 ~~~~~~~~~i~v~t------~~em~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i  316 (405)
                         .+|+..+++.|      .+|+.++..+.-+ +-.+       +--+..-++.=+|+=.-.-+-.--+.-..++-+.+
T Consensus       224 ---I~G~~riR~~~~~P~~~~d~lIe~~~~~~kv~~~l-------HlPvQsGsd~ILk~M~R~yt~e~~~~~i~k~R~~~  293 (437)
T COG0621         224 ---IPGIERIRFGSSHPLEFTDDLIEAIAETPKVCPHL-------HLPVQSGSDRILKRMKRGYTVEEYLEIIEKLRAAR  293 (437)
T ss_pred             ---CCCCEEEEEECCCCHHCCHHHHHHHHCCCCCCCCC-------CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHC
T ss_conf             ---79910899935880011889999986578414344-------67555698799997378767999999999999868


Q ss_pred             HHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEE
Q ss_conf             621489958999811412389999999997499899
Q gi|254780622|r  317 GHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFI  352 (405)
Q Consensus       317 ~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~I  352 (405)
                      -.......++|||--||++.-++..+-+++-+.|.+
T Consensus       294 Pd~~i~tDiIVGFPgETEedFe~tl~lv~e~~fd~~  329 (437)
T COG0621         294 PDIAISTDIIVGFPGETEEDFEETLDLVEEVRFDRL  329 (437)
T ss_pred             CCCEEECCEEEECCCCCHHHHHHHHHHHHHHCCCEE
T ss_conf             985675267997999999999999999997488878


Done!