HHsearch alignment for GI: 254780622 and conserved domain: pfam00582
>pfam00582 Usp Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.
Probab=92.16 E-value=0.95 Score=24.60 Aligned_cols=114 Identities=18% Similarity=0.194 Sum_probs=55.4
Q ss_pred CEEEEEEECHHHHHHHHHHHHHH-HHCCCEEEEEECHHHHHH--CC-------HHHH----HH----------HHCCCCC
Q ss_conf 56999952847899999999999-987988999858568630--69-------8999----99----------7479758
Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRL-RERGAVVIPVMTKSAQKF--IT-------PLIV----GA----------ISNRRVY 61 (405)
Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L-~~~g~~V~vv~T~~A~~f--i~-------~~~l----~~----------lt~~~v~ 61 (405)
T Consensus 3 k~Ilv~vD~s~~s~~al~~A~~~a~~~~~~l~llhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140)
T pfam00582 3 KRILVAVDGSEESERALEWALELAKRRGAELILLHVIDPEPSGAASEALEEEEEEELEEEEAEAEALAEAAAEAGGVVVE 82 (140)
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 84999985999999999999999986499799999962887554443330357999999999999999998635798679
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEC
Q ss_conf 20767887787743001144655788411188898852024552146667522799689840
Q gi|254780622|r 62 THLLSYKEGYESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAP 123 (405)
Q Consensus 62 ~~~~~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaP 123 (405)
T Consensus 83 ~~~~~g~~~~~I~~~~~~~~~dliV~G~~~~~~~~~~~~Gs~----s~~v~~~~~~pVlvvk 140 (140)
T pfam00582 83 VVVRGGDPAEAILEVAEEEDADLIVMGSRGRSGLRRLLLGSV----AEKVLRHAPCPVLVVR 140 (140)
T ss_pred EEEEEECHHHHHCEEECCCCCCEEEEECCCCCCCCCCCCCHH----HHHHHHCCCCCEEEEC
T ss_conf 999960703642100005678889992899986446501739----9999954899899969