HHsearch alignment for GI: 254780623 and conserved domain: COG2334
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only].
Probab=97.29 E-value=0.00081 Score=48.77 Aligned_cols=171 Identities=18% Similarity=0.226 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCH-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--HHHHHHH-------
Q ss_conf 666778888655550212888723687640310-468877778899987532114685433469--1799999-------
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPG-VRKRFFRDIQVMYLIARIQEKLLPSMRRLC--FSAVVRA------- 194 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~-i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~--~~~~~~e------- 194 (517)
T Consensus 32 ~~l~s-~eN~~f~~~~~~---g~~-iLki~~~~~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~l 106 (331)
T COG2334 32 RGLNS-EENSNFRVQTED---GRY-ILKIYRPGWTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAAL 106 (331)
T ss_pred CCCCC-CCCCEEEEECCC---CCE-EEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEE
T ss_conf 32333-467517887179---976-9998268888777799999999999759988777616785611101478657999
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH---HCCCHH-CCCCEEEEECCCCCCCCHHHHHHHHCCC
Q ss_conf --------9988788865599998898720244677664300---001022-1783353002478632426773320022
Q gi|254780623|r 195 --------LEQVTKMEMDLRLEAAAFSEMAENTVKDQGFRVP---KIDWNR-TERDVITMEWIDGVKISDTEKLRACGHD 262 (517)
Q Consensus 195 --------~~~~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP---~vy~~~-st~~VLvmE~i~G~~i~d~~~l~~~~~d 262 (517)
T Consensus 107 f~~l~G~~~~~-~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~-----~~~~~-l~a---~ 176 (331)
T COG2334 107 FEYLPGRPLER-DDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDL-----VEPED-LRA---A 176 (331)
T ss_pred EEECCCCCCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-----CCCHH-HHH---H
T ss_conf 88669967677-88789999999999999997477976588733432201111155665314-----78776-779---9
Q ss_pred HHHHHHHHHHHHHHHHHHCC---EECCCCCCCEEEEECCCC-EEEEECCHHEE
Q ss_conf 56899999999999897448---661787862289802895-35743403121
Q gi|254780623|r 263 LERLSVTLVQSFLLHTLRDG---FFHADLHPGNLFVDSKGY-IVAVDMGITGR 311 (517)
Q Consensus 263 ~~~la~~l~~~~~~qi~~~G---fFHaDPHpGNi~v~~dg~-i~~lDfG~vg~ 311 (517)
T Consensus 177 ~~~~~~~~~~~~~-~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 177 LLAALDRLLARLP-AHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred HHHHHHHHHHHCH-HHCCCCCCEEEECCCCCCCEEECCCCCCCEEEECCCCCC
T ss_conf 9999999997453-326765554576677603477768987000787611244