HHsearch alignment for GI: 254780623 and conserved domain: KOG1187

Probab=97.03  E-value=0.00053  Score=50.18  Aligned_cols=183  Identities=14%  Similarity=0.176  Sum_probs=109.9

Q ss_pred             HHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9867--66677888865555021288872368764031046887777889998753211468543346917999999988
Q gi|254780623|r  121 CEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQV  198 (517)
Q Consensus       121 ~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  198 (517)
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~---~~~vAVK~~~~~~~~-------------------------------------~  114 (361)
T KOG1187          75 NNFSESNLIGEGGFGTVYKGVLSD---GTVVAVKRLSSNSGQ-------------------------------------G  114 (361)
T ss_pred             HCCCHHHEEEECCCEEEEEEEECC---CEEEEEEEECCCCCC-------------------------------------C
T ss_conf             367731139945887789999689---808999982466774-------------------------------------3


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCC----CCEEEEECCCCCCCCHHHHHHHH-CC---CHHHHHHHH
Q ss_conf             78886559999889872024467766430000102217----83353002478632426773320-02---256899999
Q gi|254780623|r  199 TKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTE----RDVITMEWIDGVKISDTEKLRAC-GH---DLERLSVTL  270 (517)
Q Consensus       199 l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st----~~VLvmE~i~G~~i~d~~~l~~~-~~---d~~~la~~l  270 (517)
T Consensus       115 ---~~eF~~Ev~~ls~l~H--~Nl--v~L----lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~  183 (361)
T KOG1187         115 ---EREFLNEVEILSRLRH--PNL--VKL----LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGA  183 (361)
T ss_pred             ---HHHHHHHHHHHHCCCC--CCC--CCE----EEEEECCCCCEEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf             ---3879999999843898--684--538----88881699815899956899988998557888898989999999999


Q ss_pred             HH--HHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
Q ss_conf             99--999989744866178786228980289535743403121698-999999976699971872789999998412667
Q gi|254780623|r  271 VQ--SFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSK-RERRFLAEILYGFISRDYQRVADVHFEAGYVPR  347 (517)
Q Consensus       271 ~~--~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~-~~r~~l~~l~~a~~~~D~~~~~~~l~~lg~~~~  347 (517)
T Consensus       184 A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~-~-----~gt~gY~~PEy~~~g~lt~  257 (361)
T KOG1187         184 ARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTT-V-----MGTFGYLAPEYASTGKLTE  257 (361)
T ss_pred             HHHHHHHCCCCCCCEEECCCCHHHEEECCCCCEEECCCCCCCCCCCCCCCEEEE-C-----CCCCCCCCHHHHHHCCCCC
T ss_conf             889998726899987879778999607889976836565650267555401343-2-----6756715877861378774


Q ss_pred             CCCHHHHHHHHHH
Q ss_conf             7893689999998
Q gi|254780623|r  348 HHNRFSFAQAIRA  360 (517)
Q Consensus       348 ~~d~~~~~~~i~~  360 (517)
T Consensus       258 KsDVySFGVvllE  270 (361)
T KOG1187         258 KSDVYSFGVVLLE  270 (361)
T ss_pred             CCCEECCCHHHHH
T ss_conf             1643626589999