HHsearch alignment for GI: 254780623 and conserved domain: KOG1234
>KOG1234 consensus.
Probab=100.00 E-value=3.5e-40 Score=330.61 Aligned_cols=336 Identities=22% Similarity=0.276 Sum_probs=295.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHHHHEECCCCCCEEEEEEECCH
Q ss_conf 45988999999988748878998999998754047889999998676-66778888655550212888723687640310
Q gi|254780623|r 79 DLIGKKLSEDLALLQDKMDFFPTNTARLSVASALKAPIEELYCEFDD-PIAAASIAQVHPAVVHDINGYRKVAVKIIRPG 157 (517)
Q Consensus 79 Dllp~~~~~eL~~Lqd~vpp~~~~~v~~~ie~elg~~~~~~F~~fde-PlasASiaQVh~A~l~d~~~g~~VaVKV~rP~ 157 (517)
T Consensus 8 ~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~---g~eVavKiQYPG 84 (363)
T KOG1234 8 SLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLAD---GPEVAVKIQYPG 84 (363)
T ss_pred CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC---CCEEEEECCCCC
T ss_conf 70587799999985376566985664478763224558998876424763124688899998537---980021047786
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCC
Q ss_conf 46887777889998753211468543346917999999988788865599998898720244677664300001022178
Q gi|254780623|r 158 VRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTER 237 (517)
Q Consensus 158 i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~ 237 (517)
T Consensus 85 va~sI~SD~~nl~~lLn~s-~llPk--GLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~Elct~ 161 (363)
T KOG1234 85 VARSIDSDANNLSRLLNFS-GLLPK--GLFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVDELCTV 161 (363)
T ss_pred HHHHCCCCHHHHHHHHHHC-CCCCC--CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
T ss_conf 1654148689999998621-64643--21378999999986322342477777776468874689876513778765153
Q ss_pred CEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEC-CCCEEEEECCHHEECCHHH
Q ss_conf 335300247863242677332002256899999999999897448661787862289802-8953574340312169899
Q gi|254780623|r 238 DVITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHTLRDGFFHADLHPGNLFVDS-KGYIVAVDMGITGRLSKRE 316 (517)
Q Consensus 238 ~VLvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi~~~GfFHaDPHpGNi~v~~-dg~i~~lDfG~vg~l~~~~ 316 (517)
T Consensus 162 rvlt~el~~G~pid~~~~~sQ~--~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~tk~i~LlDFGAsr~y~~~F 239 (363)
T KOG1234 162 RVLTLELGQGLPIDKTAKLSQE--TRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGRTKKIELLDFGASREYGEKF 239 (363)
T ss_pred HHHHHHHHCCCCCHHHHCCCHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCEEEEEECCCCCCCCHHH
T ss_conf 1433444047201222110488--99999999999999999887543379877875117776557887436553126789
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHCCCC---CHHHCCHHHHHHHHHHHHHHCC
Q ss_conf 9999976699971872789999998412667789---368999999852100133---4333113568999997545279
Q gi|254780623|r 317 RRFLAEILYGFISRDYQRVADVHFEAGYVPRHHN---RFSFAQAIRAIGEPIHGQ---SSDVISMGKLLTMLFEITELFD 390 (517)
Q Consensus 317 r~~l~~l~~a~~~~D~~~~~~~l~~lg~~~~~~d---~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~ 390 (517)
T Consensus 240 ~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~Es~~m~DAHv~sv~ilgepfa~~~pydF~~q~~t~ri~~lipvmL~hR 319 (363)
T KOG1234 240 IDKYIRLLKAAADRDREGVIEMSRELGFLTGYESKVMEDAHVESVMILGEPFASDGPYDFGDQTVTDRIQNLIPVMLRHR 319 (363)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 99999999999712668899998885651351387788776667641045335789967676689999986527998656
Q ss_pred CCCCH-HHHHHHHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 71288-899999999998849987688988899
Q gi|254780623|r 391 MMTRP-ELVMLQKTMVVVEGVARMLNPEFNMWV 422 (517)
Q Consensus 391 ~~~P~-~~~ll~r~l~~lEG~~~~LdP~~d~~~ 422 (517)
T Consensus 320 L~pPPeEtYsLHRklsG~fL~cakl~A~v~C~~ 352 (363)
T KOG1234 320 LCPPPEETYSLHRKLSGAFLLCAKLGATVPCRD 352 (363)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 789948889999984238999998668770799