HHsearch alignment for GI: 254780623 and conserved domain: KOG1236

>KOG1236 consensus.
Probab=100.00  E-value=0  Score=527.85  Aligned_cols=376  Identities=22%  Similarity=0.360  Sum_probs=348.6

Q ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC-CHHHHHHHHH-HHHHHH
Q ss_conf             78999999960428999999997100459889999999887488789989999987540478-8999999867-666778
Q gi|254780623|r   53 SDRLARAMNRLGPSYVKMGQFLATRPDLIGKKLSEDLALLQDKMDFFPTNTARLSVASALKA-PIEELYCEFD-DPIAAA  130 (517)
Q Consensus        53 ~~rlr~~le~LGptfiKlGQ~lstR~Dllp~~~~~eL~~Lqd~vpp~~~~~v~~~ie~elg~-~~~~~F~~fd-ePlasA  130 (517)
T Consensus       121 ~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIGsG  200 (565)
T KOG1236         121 LRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIGSG  200 (565)
T ss_pred             HHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
T ss_conf             99999999752986687142002264316799999988875058987317789999999774748999873487655654


Q ss_pred             HHHHHHHHHEEC-------------CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             888655550212-------------8887236876403104688777788999875321146854334691799999998
Q gi|254780623|r  131 SIAQVHPAVVHD-------------INGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQ  197 (517)
Q Consensus       131 SiaQVh~A~l~d-------------~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~  197 (517)
T Consensus       201 ~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~-~vP~l~wL~l~~~vkqF~v  279 (565)
T KOG1236         201 CIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLIN-NVPDLSWLSLPLEVKQFSV  279 (565)
T ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCHHHHHHH
T ss_conf             133455555418876313440231477653155411075678889999999852144555-4676311167205889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCC-CHHHHHHHHHHHHHH
Q ss_conf             8788865599998898720244677664300001022178335300247863242677332002-256899999999999
Q gi|254780623|r  198 VTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGH-DLERLSVTLVQSFLL  276 (517)
Q Consensus       198 ~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~-d~~~la~~l~~~~~~  276 (517)
T Consensus       280 ~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~Allk  359 (565)
T KOG1236         280 GLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALLK  359 (565)
T ss_pred             HHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             98741006554431588987513535524776532134443122102455207765422227699999999877999999


Q ss_pred             HHHHCCEECCCCCCCEEEEEC--C-----------------------------------------CCEEEEECCHHEECC
Q ss_conf             897448661787862289802--8-----------------------------------------953574340312169
Q gi|254780623|r  277 HTLRDGFFHADLHPGNLFVDS--K-----------------------------------------GYIVAVDMGITGRLS  313 (517)
Q Consensus       277 qi~~~GfFHaDPHpGNi~v~~--d-----------------------------------------g~i~~lDfG~vg~l~  313 (517)
T Consensus       360 Ml~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGiv~kLs  439 (565)
T KOG1236         360 MLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGIVTKLS  439 (565)
T ss_pred             HHHHHCCEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCC
T ss_conf             99860001124577747998547875433332203566776435654556653332126534688749995230544047


Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC-CCCHHHCCHHHHHHHHHHHHHHCCCC
Q ss_conf             89999999766999718727899999984126677893689999998521001-33433311356899999754527971
Q gi|254780623|r  314 KRERRFLAEILYGFISRDYQRVADVHFEAGYVPRHHNRFSFAQAIRAIGEPIH-GQSSDVISMGKLLTMLFEITELFDMM  392 (517)
Q Consensus       314 ~~~r~~l~~l~~a~~~~D~~~~~~~l~~lg~~~~~~d~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~  392 (517)
T Consensus       440 ~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~st~sl~tl~i~~ll~em~tmvreH~V~  519 (565)
T KOG1236         440 HQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARSTKSLRTLNIGDLLSEMFTMVREHHVR  519 (565)
T ss_pred             HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEE
T ss_conf             14188799999999875152188999764501048988999999999999864204467476899999999999875242


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             2888999999999988499876889888999999999
Q gi|254780623|r  393 TRPELVMLQKTMVVVEGVARMLNPEFNMWVSSEPIVE  429 (517)
Q Consensus       393 ~P~~~~ll~r~l~~lEG~~~~LdP~~d~~~~~~p~~~  429 (517)
T Consensus       520 ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l~  556 (565)
T KOG1236         520 IDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLLN  556 (565)
T ss_pred             ECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf             0243377889999886224446998216664788999