HHsearch alignment for GI: 254780623 and conserved domain: KOG4236

Probab=97.60  E-value=0.00018  Score=53.87  Aligned_cols=157  Identities=21%  Similarity=0.313  Sum_probs=101.0

Q ss_pred             HHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             9875404788999999867-666778888655550212888723687640310468877778899987532114685433
Q gi|254780623|r  106 LSVASALKAPIEELYCEFD-DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMR  184 (517)
Q Consensus       106 ~~ie~elg~~~~~~F~~fd-ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~  184 (517)
T Consensus       552 ~qiqe~v--d~stvYQif~devLGSGQFG~VYgg~hRk--tGrdVAvKvIdK-------------------l-r-Fp~k-  605 (888)
T KOG4236         552 CQIQENV--DISTVYQIFADEVLGSGQFGTVYGGKHRK--TGRDVAVKVIDK-------------------L-R-FPTK-  605 (888)
T ss_pred             HHHHHHH--HHHHHHHHHHHHHCCCCCCEEEECCEECC--CCCEEEEEEEEC-------------------C-C-CCCC-
T ss_conf             3455423--17889876047511677522465221034--686134665101-------------------2-3-7874-


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCE-EEEECCCCCCCCHHHHHHHHCCCH
Q ss_conf             4691799999998878886559999889872024467766430000102217833-530024786324267733200225
Q gi|254780623|r  185 RLCFSAVVRALEQVTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDV-ITMEWIDGVKISDTEKLRACGHDL  263 (517)
Q Consensus       185 ~~~~~~~~~e~~~~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~V-LvmE~i~G~~i~d~~~l~~~~~d~  263 (517)
T Consensus       606 ----------------qesqlR~EVaILq~l~-----HPGiV~le~M~E-T~ervFVVMEKl~GDMLEMILSs-----Ek  658 (888)
T KOG4236         606 ----------------QESQLRNEVAILQNLH-----HPGIVNLECMFE-TPERVFVVMEKLHGDMLEMILSS-----EK  658 (888)
T ss_pred             ----------------HHHHHHHHHHHHHHCC-----CCCEEEEEEEEC-CCCEEEEEEHHHCCHHHHHHHHH-----HC
T ss_conf             ----------------1788888999997447-----987567887503-77648998034054199998875-----40


Q ss_pred             HHHHHHHHHHHHHHHH-------HCCEECCCCCCCEEEEEC---CCCEEEEECCHHEECCHH
Q ss_conf             6899999999999897-------448661787862289802---895357434031216989
Q gi|254780623|r  264 ERLSVTLVQSFLLHTL-------RDGFFHADLHPGNLFVDS---KGYIVAVDMGITGRLSKR  315 (517)
Q Consensus       264 ~~la~~l~~~~~~qi~-------~~GfFHaDPHpGNi~v~~---dg~i~~lDfG~vg~l~~~  315 (517)
T Consensus       659 gRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk  720 (888)
T KOG4236         659 GRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK  720 (888)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHEEECCCCCCCCEEECCCCCEEECCHH
T ss_conf             56337889999999999998765356521157702244225799874134045400231423