HHsearch alignment for GI: 254780623 and conserved domain: PRK01723
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed.
Probab=97.38 E-value=0.0013 Score=47.15 Aligned_cols=102 Identities=24% Similarity=0.337 Sum_probs=67.8
Q ss_pred CCCCCHHCCCHHCCCCE------EEEECCCCCC-CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEE
Q ss_conf 66430000102217833------5300247863-2426773320022568999999999998974486617878622898
Q gi|254780623|r 223 QGFRVPKIDWNRTERDV------ITMEWIDGVK-ISDTEKLRACGHDLERLSVTLVQSFLLHTLRDGFFHADLHPGNLFV 295 (517)
Q Consensus 223 ~~v~vP~vy~~~st~~V------LvmE~i~G~~-i~d~~~l~~~~~d~~~la~~l~~~~~~qi~~~GfFHaDPHpGNi~v 295 (517)
T Consensus 101 ~glpVP~PvAa~v~r~g~~Y~Adiite~I~~a~~L~~~--L~~~~l~~~~w--~~iG~~I~~fH~~gV~H~DLN~~NILi 176 (240)
T PRK01723 101 AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVAL--LQEGPLSEEQW--QAIGRLIARFHDAGVYHADLNAHNILL 176 (240)
T ss_pred CCCCCCCHHHHHHEECCEEEEHHHHHHHCCCCCCHHHH--HHHCCCCHHHH--HHHHHHHHHHHHCCCCCCCCCHHHEEE
T ss_conf 79999817777703236278835656356897048999--85089988999--999999999997489766667441678
Q ss_pred ECCCCEEEEECCHHEECCH---HHHHHHHHHHHHHH
Q ss_conf 0289535743403121698---99999997669997
Q gi|254780623|r 296 DSKGYIVAVDMGITGRLSK---RERRFLAEILYGFI 328 (517)
Q Consensus 296 ~~dg~i~~lDfG~vg~l~~---~~r~~l~~l~~a~~ 328 (517)
T Consensus 177 d~~~~vwlIDFDk~~~~~~~~~Wk~~NL~RL~RSl~ 212 (240)
T PRK01723 177 DAGGKFWLIDFDRGELRTPATRWKQANLARLLRSFN 212 (240)
T ss_pred CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 799988999886303368864488999999999899