HHsearch alignment for GI: 254780623 and conserved domain: PRK04750
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed.
Probab=100.00 E-value=0 Score=1014.54 Aligned_cols=508 Identities=35% Similarity=0.555 Sum_probs=472.9
Q ss_pred CHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
Q ss_conf 91489899999999961579865531331267888775320023465556807899999996042899999999710045
Q gi|254780623|r 1 MKEYYELFRIAWILIREGVIVSLPSDRLPPIIVFGKKIASLFVRRNIKKCQRSDRLARAMNRLGPSYVKMGQFLATRPDL 80 (517)
Q Consensus 1 ~~~~~R~~~i~~v~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlr~~le~LGptfiKlGQ~lstR~Dl 80 (517)
T Consensus 1 m~~l~R~~~I~~vl~ryG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~RlR~alEeLGPtfIKlGQ~LStR~Dl 79 (540)
T PRK04750 1 MGELLRLYKIIRVFLRYGLDELILSMRLTRPLRLLRRSLFWM-SNRHKDKPRGERLRLALQELGPIFVKFGQMLSTRRDL 79 (540)
T ss_pred CCCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
T ss_conf 951079999999999938498987456404688888741354-2244579989999999999786999999999806644
Q ss_pred CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH-HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHH
Q ss_conf 98899999998874887899899999875404788999999867-66677888865555021288872368764031046
Q gi|254780623|r 81 IGKKLSEDLALLQDKMDFFPTNTARLSVASALKAPIEELYCEFD-DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVR 159 (517)
Q Consensus 81 lp~~~~~eL~~Lqd~vpp~~~~~v~~~ie~elg~~~~~~F~~fd-ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~ 159 (517)
T Consensus 80 lP~~~~~eL~~LqD~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PiAsASIaQVH~A~L~d--~G~~VaVKVqRP~I~ 157 (540)
T PRK04750 80 FPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIEPLASASIAQVHTARLKD--NGREVVVKVLRPDIL 157 (540)
T ss_pred CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCHHEEEEEECC--CCCEEEEEEECCCHH
T ss_conf 899999999997379999998999999999869799999770697602211141147889658--981899988788879
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCE
Q ss_conf 88777788999875321146854334691799999998878886559999889872024467766430000102217833
Q gi|254780623|r 160 KRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDV 239 (517)
Q Consensus 160 ~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~V 239 (517)
T Consensus 158 ~~I~~DL~ll~~la~~~~~~~~~~~~~~~~~vv~ef~~~l~~ELDf~~EA~N~~~f~~nf~~~~~v~vP~vy~~~st~rV 237 (540)
T PRK04750 158 PVIDADLALMRRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDLLYVPEVYWDYCSETV 237 (540)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCE
T ss_conf 99988999999999988861940300686999999999999998699999999999997279999897974587457861
Q ss_pred EEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEECC----CCEEEEECCHHEECCHH
Q ss_conf 53002478632426773320022568999999999998974486617878622898028----95357434031216989
Q gi|254780623|r 240 ITMEWIDGVKISDTEKLRACGHDLERLSVTLVQSFLLHTLRDGFFHADLHPGNLFVDSK----GYIVAVDMGITGRLSKR 315 (517)
Q Consensus 240 LvmE~i~G~~i~d~~~l~~~~~d~~~la~~l~~~~~~qi~~~GfFHaDPHpGNi~v~~d----g~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 238 LvME~i~Gi~i~d~~~l~~~g~d~~~lA~~~~~~f~~Qvf~dGFFHADpHPGNi~v~~d~~~~g~~~~lDfGmvG~L~~~ 317 (540)
T PRK04750 238 LVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDHPENPRYIALDFGIVGSLNKE 317 (540)
T ss_pred EEEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHEEECCCCCCCCCEEEEEEEEECCCCHH
T ss_conf 25630068655549999755998999999999999633400886606999510364577777874788740132138999
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 99999976699971872789999998412667789368999999852100133433311356899999754527971288
Q gi|254780623|r 316 ERRFLAEILYGFISRDYQRVADVHFEAGYVPRHHNRFSFAQAIRAIGEPIHGQSSDVISMGKLLTMLFEITELFDMMTRP 395 (517)
Q Consensus 316 ~r~~l~~l~~a~~~~D~~~~~~~l~~lg~~~~~~d~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~P~ 395 (517)
T Consensus 318 ~r~~l~~l~~a~~~~D~~~va~~~~~~g~v~~~~~~~~l~~~i~~~~~~~~~~~l~~i~~g~~l~~l~~~~r~~~i~~p~ 397 (540)
T PRK04750 318 DKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIFDKPLKEISFGHVLLRLFNTARRFNVEIQP 397 (540)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCCCH
T ss_conf 99999999999994059999999999589998888799999999999986089887581999999999999988963682
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999884998768898889999999999998645968899999999999999999766779999999999861
Q gi|254780623|r 396 ELVMLQKTMVVVEGVARMLNPEFNMWVSSEPIVEEWIRDHLGAKSCVVDFQDGIKTAFRLVQAAPQLSISVEKILKSLVE 475 (517)
Q Consensus 396 ~~~ll~r~l~~lEG~~~~LdP~~d~~~~~~p~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~lp~lp~~l~~il~~~~~ 475 (517)
T Consensus 398 ~l~ll~Kal~~lEG~~r~LdP~~dl~~~a~P~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lP---~~l~~~L~~~~~ 474 (540)
T PRK04750 398 QLVLLQKTLLNVEGLGRQLDPQLDLWKTAKPFLERWMREQVGPRALVRALKEEAPFWAEKLPELP---RLVHDSLRQGKL 474 (540)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_conf 78999999999998998848999879999999999999867999999999999999999999869---999999984200
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5113666433378999999999999999999999999875
Q gi|254780623|r 476 SSVKDKYLDFPKKESSRVYDFLNKLVLWSIFGALLYIISI 515 (517)
Q Consensus 476 g~l~~~~~~~~~~~~~rl~~~~~rl~l~ii~aalii~ssl 515 (517)
T Consensus 475 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~~~ 513 (540)
T PRK04750 475 LQHSVDKLAEQL-RTNRLQQGQSRYLLGVGATLLLAGVLL 513 (540)
T ss_pred CCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 041265788878-999999999899999999999999999