HHsearch alignment for GI: 254780623 and conserved domain: cd00192
>cd00192 PTKc Catalytic Domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.82 E-value=7.4e-09 Score=87.81 Aligned_cols=144 Identities=15% Similarity=0.203 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHEEC-CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 666778888655550212-8887236876403104688777788999875321146854334691799999998878886
Q gi|254780623|r 125 DPIAAASIAQVHPAVVHD-INGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEM 203 (517)
Q Consensus 125 ePlasASiaQVh~A~l~d-~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 203 (517)
T Consensus 1 ~~iG~G~fg~V~~a~~~~~~~~~~~VAvK~~~~~~~~~-----------------------------~~--------~-- 41 (261)
T cd00192 1 KKLGEGAFGEVYKGELKGKGGKKTPVAVKTLKEDASDS-----------------------------ER--------E-- 41 (261)
T ss_pred CCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCHH-----------------------------HH--------H--
T ss_conf 93874888289999997799725999999989327999-----------------------------99--------9--
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHCCCH--HCCCCEEEEECCCCCCCCHHHHHH-------HHCCC---HHHHHHHHH
Q ss_conf 559999889872024467766430000102--217833530024786324267733-------20022---568999999
Q gi|254780623|r 204 DLRLEAAAFSEMAENTVKDQGFRVPKIDWN--RTERDVITMEWIDGVKISDTEKLR-------ACGHD---LERLSVTLV 271 (517)
Q Consensus 204 D~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~--~st~~VLvmE~i~G~~i~d~~~l~-------~~~~d---~~~la~~l~ 271 (517)
T Consensus 42 ~~~~E~~~l~~l~H-----pnIv--~~~g~~~~~~~~~iv~Ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~~~~~~~qia 114 (261)
T cd00192 42 DFLKEAKIMKKLGH-----PNIV--RLLGVCTEEEPLYLVLEYMEGGDLLDFLRKSRPVFSPESSTLSLKDLLSFAYQIA 114 (261)
T ss_pred HHHHHHHHHHHCCC-----CCEE--EEEEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999986899-----8884--2878996799889999806999599999863555444468899999999999999
Q ss_pred HHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf 99999897448661787862289802895357434031216989
Q gi|254780623|r 272 QSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 272 ~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 115 ~g-l~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFGls~~~~~~ 157 (261)
T cd00192 115 SG-MEYLASKNFVHRDLAARNVLVGEDLVVKIADFGLSRDIYDD 157 (261)
T ss_pred HH-HHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCC
T ss_conf 99-99997699557877678789879996899216576576789