HHsearch alignment for GI: 254780623 and conserved domain: cd00192

>cd00192 PTKc Catalytic Domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.82  E-value=7.4e-09  Score=87.81  Aligned_cols=144  Identities=15%  Similarity=0.203  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHHHHHEEC-CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             666778888655550212-8887236876403104688777788999875321146854334691799999998878886
Q gi|254780623|r  125 DPIAAASIAQVHPAVVHD-INGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEM  203 (517)
Q Consensus       125 ePlasASiaQVh~A~l~d-~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  203 (517)
T Consensus         1 ~~iG~G~fg~V~~a~~~~~~~~~~~VAvK~~~~~~~~~-----------------------------~~--------~--   41 (261)
T cd00192           1 KKLGEGAFGEVYKGELKGKGGKKTPVAVKTLKEDASDS-----------------------------ER--------E--   41 (261)
T ss_pred             CCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCHH-----------------------------HH--------H--
T ss_conf             93874888289999997799725999999989327999-----------------------------99--------9--


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHCCCH--HCCCCEEEEECCCCCCCCHHHHHH-------HHCCC---HHHHHHHHH
Q ss_conf             559999889872024467766430000102--217833530024786324267733-------20022---568999999
Q gi|254780623|r  204 DLRLEAAAFSEMAENTVKDQGFRVPKIDWN--RTERDVITMEWIDGVKISDTEKLR-------ACGHD---LERLSVTLV  271 (517)
Q Consensus       204 D~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~--~st~~VLvmE~i~G~~i~d~~~l~-------~~~~d---~~~la~~l~  271 (517)
T Consensus        42 ~~~~E~~~l~~l~H-----pnIv--~~~g~~~~~~~~~iv~Ey~~~GsL~~~l~~~~~~~~~~~~~l~~~~~~~~~~qia  114 (261)
T cd00192          42 DFLKEAKIMKKLGH-----PNIV--RLLGVCTEEEPLYLVLEYMEGGDLLDFLRKSRPVFSPESSTLSLKDLLSFAYQIA  114 (261)
T ss_pred             HHHHHHHHHHHCCC-----CCEE--EEEEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             99999999986899-----8884--2878996799889999806999599999863555444468899999999999999


Q ss_pred             HHHHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf             99999897448661787862289802895357434031216989
Q gi|254780623|r  272 QSFLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR  315 (517)
Q Consensus       272 ~~~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~  315 (517)
T Consensus       115 ~g-l~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFGls~~~~~~  157 (261)
T cd00192         115 SG-MEYLASKNFVHRDLAARNVLVGEDLVVKIADFGLSRDIYDD  157 (261)
T ss_pred             HH-HHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCC
T ss_conf             99-99997699557877678789879996899216576576789