HHsearch alignment for GI: 254780623 and conserved domain: cd05058
>cd05058 PTKc_Met_Ron Catalytic Domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.64 E-value=6.1e-07 Score=72.96 Aligned_cols=142 Identities=13% Similarity=0.168 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHEECCC-CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 677888865555021288-8723687640310468877778899987532114685433469179999999887888655
Q gi|254780623|r 127 IAAASIAQVHPAVVHDIN-GYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDL 205 (517)
Q Consensus 127 lasASiaQVh~A~l~d~~-~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~ 205 (517)
T Consensus 3 iG~G~fG~Vykg~~~~~~~~~~~vAvK~l~~~----------------------------~~~-~----------~~~~f 43 (262)
T cd05058 3 IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI----------------------------TDL-E----------EVEQF 43 (262)
T ss_pred EEECCCEEEEEEEEECCCCEEEEEEEEEECCC----------------------------CCH-H----------HHHHH
T ss_conf 01189829998999789985899999997876----------------------------797-8----------99999
Q ss_pred HHHHHHHHHHHCCCCCCCCC-CCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCC--CHH---HHHHHHHHHHHHHHH
Q ss_conf 99998898720244677664-300001022178335300247863242677332002--256---899999999999897
Q gi|254780623|r 206 RLEAAAFSEMAENTVKDQGF-RVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGH--DLE---RLSVTLVQSFLLHTL 279 (517)
Q Consensus 206 ~~Ea~n~~~~~~~~~~~~~v-~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~--d~~---~la~~l~~~~~~qi~ 279 (517)
T Consensus 44 ~~E~~~l~~l~H-----pNIv~~~g~~~~~~~~~~iv~e~~~~GsL~~~l--~~~~~~~~~~~~~~i~~qia~g-l~yLH 115 (262)
T cd05058 44 LKEGIIMKDFSH-----PNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFI--RSETHNPTVKDLIGFGLQVAKG-MEYLA 115 (262)
T ss_pred HHHHHHHHHCCC-----CCCCCEEEEEECCCCCEEEEEECCCCCCHHHHH--HCCCCCCCHHHHHHHHHHHHHH-HHHHC
T ss_conf 999999996799-----993435689985899569999857999799997--5346798899999999999999-99980
Q ss_pred HCCEECCCCCCCEEEEECCCCEEEEECCHHEECCHH
Q ss_conf 448661787862289802895357434031216989
Q gi|254780623|r 280 RDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLSKR 315 (517)
Q Consensus 280 ~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~ 315 (517)
T Consensus 116 ~~~ivHrDlK~~NiLld~~~~~Kl~DFGla~~~~~~ 151 (262)
T cd05058 116 SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDK 151 (262)
T ss_pred CCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCC
T ss_conf 199475757824088889996899764655146566