HHsearch alignment for GI: 254780623 and conserved domain: cd05059

>cd05059 PTKc_Tec_like Catalytic Domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.89  E-value=4.2e-09  Score=89.68  Aligned_cols=140  Identities=17%  Similarity=0.237  Sum_probs=90.1

Q ss_pred             HHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9867--66677888865555021288872368764031046887777889998753211468543346917999999988
Q gi|254780623|r  121 CEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQV  198 (517)
Q Consensus       121 ~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~  198 (517)
T Consensus         4 ~d~~~~~~iG~G~fg~V~~~~~~~---~~~vAvK~l~~~~~~--------------------------------------   42 (256)
T cd05059           4 SELTFLKELGSGQFGVVRLGKWRG---KIDVAIKMIREGAMS--------------------------------------   42 (256)
T ss_pred             HHCEEEEEEECCCCCEEEEEEECC---CCEEEEEEECCCCCC--------------------------------------
T ss_conf             996984597048886999999879---989999998867789--------------------------------------


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC--HHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHH---HHHHHHHH
Q ss_conf             7888655999988987202446776643000010--221783353002478632426773320022568---99999999
Q gi|254780623|r  199 TKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDW--NRTERDVITMEWIDGVKISDTEKLRACGHDLER---LSVTLVQS  273 (517)
Q Consensus       199 l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~--~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~---la~~l~~~  273 (517)
T Consensus        43 ---~~~f~~E~~~l~~l~H-----pnI--v~~~g~~~~~~~~~lvmEy~~~G~L~~~l~~~~~~~~~~~~~~i~~~ia~g  112 (256)
T cd05059          43 ---EDDFIEEAKVMMKLSH-----PNL--VQLYGVCTKQRPIFIVTEYMANGCLLNFLRQRRGKFGTEWLLDMCSDVCEA  112 (256)
T ss_pred             ---HHHHHHHHHHHHHCCC-----CCE--EEEEEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             ---8999999999985899-----888--159999988998899997069897999998668999999999999999999


Q ss_pred             HHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEEC
Q ss_conf             999897448661787862289802895357434031216
Q gi|254780623|r  274 FLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRL  312 (517)
Q Consensus       274 ~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l  312 (517)
T Consensus       113 -l~yLH~~~ivHrDlK~~NiLl~~~~~~Ki~DFGls~~~  150 (256)
T cd05059         113 -MEYLESNSFIHRDLAARNCLVGEDNVVKVSDFGLARYV  150 (256)
T ss_pred             -HHHHHHCCEECCCCCCCEEEECCCCCEEEEECCCCCCC
T ss_conf             -99998799167867806389999997999866764276