HHsearch alignment for GI: 254780623 and conserved domain: cd05059
>cd05059 PTKc_Tec_like Catalytic Domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.89 E-value=4.2e-09 Score=89.68 Aligned_cols=140 Identities=17% Similarity=0.237 Sum_probs=90.1
Q ss_pred HHHH--HHHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9867--66677888865555021288872368764031046887777889998753211468543346917999999988
Q gi|254780623|r 121 CEFD--DPIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQV 198 (517)
Q Consensus 121 ~~fd--ePlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 198 (517)
T Consensus 4 ~d~~~~~~iG~G~fg~V~~~~~~~---~~~vAvK~l~~~~~~-------------------------------------- 42 (256)
T cd05059 4 SELTFLKELGSGQFGVVRLGKWRG---KIDVAIKMIREGAMS-------------------------------------- 42 (256)
T ss_pred HHCEEEEEEECCCCCEEEEEEECC---CCEEEEEEECCCCCC--------------------------------------
T ss_conf 996984597048886999999879---989999998867789--------------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC--HHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHH---HHHHHHHH
Q ss_conf 7888655999988987202446776643000010--221783353002478632426773320022568---99999999
Q gi|254780623|r 199 TKMEMDLRLEAAAFSEMAENTVKDQGFRVPKIDW--NRTERDVITMEWIDGVKISDTEKLRACGHDLER---LSVTLVQS 273 (517)
Q Consensus 199 l~~ElD~~~Ea~n~~~~~~~~~~~~~v~vP~vy~--~~st~~VLvmE~i~G~~i~d~~~l~~~~~d~~~---la~~l~~~ 273 (517)
T Consensus 43 ---~~~f~~E~~~l~~l~H-----pnI--v~~~g~~~~~~~~~lvmEy~~~G~L~~~l~~~~~~~~~~~~~~i~~~ia~g 112 (256)
T cd05059 43 ---EDDFIEEAKVMMKLSH-----PNL--VQLYGVCTKQRPIFIVTEYMANGCLLNFLRQRRGKFGTEWLLDMCSDVCEA 112 (256)
T ss_pred ---HHHHHHHHHHHHHCCC-----CCE--EEEEEEEEECCEEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf ---8999999999985899-----888--159999988998899997069897999998668999999999999999999
Q ss_pred HHHHHHHCCEECCCCCCCEEEEECCCCEEEEECCHHEEC
Q ss_conf 999897448661787862289802895357434031216
Q gi|254780623|r 274 FLLHTLRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRL 312 (517)
Q Consensus 274 ~~~qi~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l 312 (517)
T Consensus 113 -l~yLH~~~ivHrDlK~~NiLl~~~~~~Ki~DFGls~~~ 150 (256)
T cd05059 113 -MEYLESNSFIHRDLAARNCLVGEDNVVKVSDFGLARYV 150 (256)
T ss_pred -HHHHHHCCEECCCCCCCEEEECCCCCEEEEECCCCCCC
T ss_conf -99998799167867806389999997999866764276