HHsearch alignment for GI: 254780623 and conserved domain: cd05060

>cd05060 PTKc_Syk_like Catalytic Domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.64  E-value=2.7e-07  Score=75.76  Aligned_cols=140  Identities=17%  Similarity=0.136  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHEECCC-CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             66677888865555021288-87236876403104688777788999875321146854334691799999998878886
Q gi|254780623|r  125 DPIAAASIAQVHPAVVHDIN-GYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEM  203 (517)
Q Consensus       125 ePlasASiaQVh~A~l~d~~-~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  203 (517)
T Consensus         1 ~~iG~G~fg~Vy~g~~~~~~~~~~~VAiK~~~~~~~~~~~---------------------------------------~   41 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGK---------------------------------------K   41 (257)
T ss_pred             CCCCCCCCCEEEEEEEECCCCEEEEEEEEEECHHHCHHHH---------------------------------------H
T ss_conf             9485588858998999868984899999998822186789---------------------------------------9


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCCC---HHHHHHHHHH--HHHHHH
Q ss_conf             55999988987202446776643000010221783353002478632426773320022---5689999999--999989
Q gi|254780623|r  204 DLRLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGHD---LERLSVTLVQ--SFLLHT  278 (517)
Q Consensus       204 D~~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~d---~~~la~~l~~--~~~~qi  278 (517)
T Consensus        42 ~f~~E~~~l~~l~Hpn----Iv~~~g~~~--~~~~~lV~Ey~~~G~L~~~l~~-~~~~~~~~~~~~~~qia~gl~yL---  111 (257)
T cd05060          42 EFLREASVMAQLDHPC----IVRLIGVCK--GEPLMLVMELAPLGPLLKYLKK-RREIPVSDLKELAHQVAMGMAYL---  111 (257)
T ss_pred             HHHHHHHHHHHCCCCC----EEEEEEEEE--CCCEEEEEECCCCCCHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHH---
T ss_conf             9999999998679998----842641893--6936999986899999999986-79999999999999999999999---


Q ss_pred             HHCCEECCCCCCCEEEEECCCCEEEEECCHHEECC
Q ss_conf             74486617878622898028953574340312169
Q gi|254780623|r  279 LRDGFFHADLHPGNLFVDSKGYIVAVDMGITGRLS  313 (517)
Q Consensus       279 ~~~GfFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~  313 (517)
T Consensus       112 H~~~ivHrDlK~~NiLl~~~~~vKl~DFGls~~~~  146 (257)
T cd05060         112 ESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALG  146 (257)
T ss_pred             HHCCEEECCCCCCCEEECCCCCEEEEECCCCEECC
T ss_conf             86995616567042578689978884140320247